Multiple sequence alignment - TraesCS6D01G112000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G112000 chr6D 100.000 8008 0 0 1 8008 78545963 78537956 0.000000e+00 14789.0
1 TraesCS6D01G112000 chr6D 84.108 3593 386 89 3809 7302 78761527 78765033 0.000000e+00 3301.0
2 TraesCS6D01G112000 chr6D 88.561 1390 126 14 1175 2562 78758935 78760293 0.000000e+00 1655.0
3 TraesCS6D01G112000 chr6D 83.691 1539 148 55 4237 5727 78357788 78356305 0.000000e+00 1356.0
4 TraesCS6D01G112000 chr6D 86.057 918 94 25 4236 5135 78500946 78500045 0.000000e+00 955.0
5 TraesCS6D01G112000 chr6D 82.367 862 102 26 2906 3754 78760711 78761535 0.000000e+00 704.0
6 TraesCS6D01G112000 chr6D 78.687 1112 181 39 4803 5882 78304430 78303343 0.000000e+00 689.0
7 TraesCS6D01G112000 chr6D 80.025 806 94 28 4 801 78757775 78758521 1.180000e-147 534.0
8 TraesCS6D01G112000 chr6D 82.909 550 91 3 1187 1734 78335422 78334874 7.220000e-135 492.0
9 TraesCS6D01G112000 chr6D 82.846 513 64 12 6498 7007 78302641 78302150 9.540000e-119 438.0
10 TraesCS6D01G112000 chr6D 80.108 558 62 28 5913 6461 78303269 78302752 3.530000e-98 370.0
11 TraesCS6D01G112000 chr6D 90.104 192 19 0 994 1185 78758716 78758907 4.800000e-62 250.0
12 TraesCS6D01G112000 chr6D 86.131 137 17 2 7873 8007 438520285 438520149 6.480000e-31 147.0
13 TraesCS6D01G112000 chr6B 94.489 4790 182 26 2804 7550 151301789 151297039 0.000000e+00 7308.0
14 TraesCS6D01G112000 chr6B 94.275 2812 113 8 1 2797 151304706 151301928 0.000000e+00 4257.0
15 TraesCS6D01G112000 chr6B 84.888 3560 392 78 3809 7302 151381141 151384620 0.000000e+00 3459.0
16 TraesCS6D01G112000 chr6B 86.993 1653 176 16 1175 2798 151378530 151380172 0.000000e+00 1825.0
17 TraesCS6D01G112000 chr6B 78.701 1216 142 46 1 1185 151377373 151378502 0.000000e+00 702.0
18 TraesCS6D01G112000 chr6B 85.015 654 77 14 2905 3545 151380329 151380974 0.000000e+00 645.0
19 TraesCS6D01G112000 chr6B 77.877 1121 181 45 4803 5883 151151571 151150478 1.130000e-177 634.0
20 TraesCS6D01G112000 chr6B 83.756 591 91 5 1187 1774 151154874 151154286 9.080000e-154 555.0
21 TraesCS6D01G112000 chr6B 82.651 611 96 6 1951 2557 151154091 151153487 4.250000e-147 532.0
22 TraesCS6D01G112000 chr6B 87.811 402 49 0 6498 6899 151149263 151148862 9.410000e-129 472.0
23 TraesCS6D01G112000 chr6B 82.774 447 40 18 6001 6442 151149803 151149389 1.640000e-96 364.0
24 TraesCS6D01G112000 chr6B 93.182 44 3 0 7164 7207 66903820 66903863 1.870000e-06 65.8
25 TraesCS6D01G112000 chr6A 90.540 3721 249 45 3837 7501 94200552 94196879 0.000000e+00 4826.0
26 TraesCS6D01G112000 chr6A 91.608 2145 128 19 538 2647 94211517 94209390 0.000000e+00 2916.0
27 TraesCS6D01G112000 chr6A 87.772 1652 164 20 1175 2798 94232874 94234515 0.000000e+00 1897.0
28 TraesCS6D01G112000 chr6A 86.482 1657 161 38 5663 7300 94238432 94240044 0.000000e+00 1760.0
29 TraesCS6D01G112000 chr6A 84.375 1856 217 52 3809 5637 94235611 94237420 0.000000e+00 1753.0
30 TraesCS6D01G112000 chr6A 94.624 930 43 5 2917 3841 94207225 94206298 0.000000e+00 1434.0
31 TraesCS6D01G112000 chr6A 94.096 542 27 3 1 540 94212107 94211569 0.000000e+00 819.0
32 TraesCS6D01G112000 chr6A 86.799 553 54 9 2906 3450 94234674 94235215 4.140000e-167 599.0
33 TraesCS6D01G112000 chr6A 85.880 517 63 8 5217 5730 94070396 94069887 7.070000e-150 542.0
34 TraesCS6D01G112000 chr6A 82.968 593 92 9 1187 1774 93895952 93895364 1.980000e-145 527.0
35 TraesCS6D01G112000 chr6A 82.459 610 94 7 1951 2556 93895166 93894566 9.210000e-144 521.0
36 TraesCS6D01G112000 chr6A 83.877 552 56 20 4284 4814 94076307 94075768 5.580000e-136 496.0
37 TraesCS6D01G112000 chr6A 86.634 404 50 3 6498 6899 93890522 93890121 2.050000e-120 444.0
38 TraesCS6D01G112000 chr6A 77.735 777 123 30 4823 5562 93892296 93891533 1.600000e-116 431.0
39 TraesCS6D01G112000 chr6A 81.216 559 66 28 5913 6461 93891167 93890638 1.610000e-111 414.0
40 TraesCS6D01G112000 chr6A 85.250 400 45 10 4821 5219 94075531 94075145 4.500000e-107 399.0
41 TraesCS6D01G112000 chr6A 80.332 422 69 11 2984 3396 93894428 93894012 2.810000e-79 307.0
42 TraesCS6D01G112000 chr6A 87.234 235 27 3 5647 5880 93891479 93891247 1.710000e-66 265.0
43 TraesCS6D01G112000 chr6A 83.922 255 25 9 937 1185 94232602 94232846 6.250000e-56 230.0
44 TraesCS6D01G112000 chr6A 91.765 85 7 0 2822 2906 142966471 142966387 1.410000e-22 119.0
45 TraesCS6D01G112000 chr6A 81.699 153 13 11 588 729 94232276 94232424 6.570000e-21 113.0
46 TraesCS6D01G112000 chr6A 87.097 62 5 1 7164 7222 36059408 36059469 5.190000e-07 67.6
47 TraesCS6D01G112000 chr3B 92.617 149 9 2 7550 7698 161629929 161629783 6.300000e-51 213.0
48 TraesCS6D01G112000 chr3A 92.568 148 10 1 7550 7697 555395217 555395363 2.260000e-50 211.0
49 TraesCS6D01G112000 chr2A 92.000 150 11 1 7550 7699 768202010 768201862 8.140000e-50 209.0
50 TraesCS6D01G112000 chr2A 90.728 151 13 1 7547 7697 24030832 24030981 4.900000e-47 200.0
51 TraesCS6D01G112000 chr2B 91.892 148 11 1 7550 7697 35370748 35370894 1.050000e-48 206.0
52 TraesCS6D01G112000 chr2B 88.889 135 10 5 7873 8002 510899391 510899257 2.310000e-35 161.0
53 TraesCS6D01G112000 chr2B 87.640 89 9 1 2823 2909 11400213 11400125 1.420000e-17 102.0
54 TraesCS6D01G112000 chr5A 90.850 153 13 1 7550 7702 55787302 55787453 3.790000e-48 204.0
55 TraesCS6D01G112000 chr1A 90.667 150 13 1 7550 7699 12767221 12767073 1.760000e-46 198.0
56 TraesCS6D01G112000 chr7D 90.066 151 12 3 7550 7700 92163211 92163358 8.200000e-45 193.0
57 TraesCS6D01G112000 chrUn 89.865 148 14 1 7550 7697 215044805 215044659 1.060000e-43 189.0
58 TraesCS6D01G112000 chrUn 93.333 45 3 0 7164 7208 326919416 326919372 5.190000e-07 67.6
59 TraesCS6D01G112000 chrUn 84.127 63 7 1 7163 7222 100628830 100628768 3.120000e-04 58.4
60 TraesCS6D01G112000 chr2D 93.976 83 4 1 2832 2914 13924112 13924031 3.030000e-24 124.0
61 TraesCS6D01G112000 chr2D 87.778 90 8 1 2823 2909 8682947 8682858 1.420000e-17 102.0
62 TraesCS6D01G112000 chr4D 91.566 83 7 0 2821 2903 50157157 50157239 1.830000e-21 115.0
63 TraesCS6D01G112000 chr1D 100.000 36 0 0 2821 2856 97912632 97912597 5.190000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G112000 chr6D 78537956 78545963 8007 True 14789.000000 14789 100.000000 1 8008 1 chr6D.!!$R4 8007
1 TraesCS6D01G112000 chr6D 78356305 78357788 1483 True 1356.000000 1356 83.691000 4237 5727 1 chr6D.!!$R2 1490
2 TraesCS6D01G112000 chr6D 78757775 78765033 7258 False 1288.800000 3301 85.033000 4 7302 5 chr6D.!!$F1 7298
3 TraesCS6D01G112000 chr6D 78500045 78500946 901 True 955.000000 955 86.057000 4236 5135 1 chr6D.!!$R3 899
4 TraesCS6D01G112000 chr6D 78302150 78304430 2280 True 499.000000 689 80.547000 4803 7007 3 chr6D.!!$R6 2204
5 TraesCS6D01G112000 chr6D 78334874 78335422 548 True 492.000000 492 82.909000 1187 1734 1 chr6D.!!$R1 547
6 TraesCS6D01G112000 chr6B 151297039 151304706 7667 True 5782.500000 7308 94.382000 1 7550 2 chr6B.!!$R2 7549
7 TraesCS6D01G112000 chr6B 151377373 151384620 7247 False 1657.750000 3459 83.899250 1 7302 4 chr6B.!!$F2 7301
8 TraesCS6D01G112000 chr6B 151148862 151154874 6012 True 511.400000 634 82.973800 1187 6899 5 chr6B.!!$R1 5712
9 TraesCS6D01G112000 chr6A 94196879 94200552 3673 True 4826.000000 4826 90.540000 3837 7501 1 chr6A.!!$R2 3664
10 TraesCS6D01G112000 chr6A 94206298 94212107 5809 True 1723.000000 2916 93.442667 1 3841 3 chr6A.!!$R6 3840
11 TraesCS6D01G112000 chr6A 94232276 94240044 7768 False 1058.666667 1897 85.174833 588 7300 6 chr6A.!!$F2 6712
12 TraesCS6D01G112000 chr6A 94069887 94070396 509 True 542.000000 542 85.880000 5217 5730 1 chr6A.!!$R1 513
13 TraesCS6D01G112000 chr6A 94075145 94076307 1162 True 447.500000 496 84.563500 4284 5219 2 chr6A.!!$R5 935
14 TraesCS6D01G112000 chr6A 93890121 93895952 5831 True 415.571429 527 82.654000 1187 6899 7 chr6A.!!$R4 5712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.170561 CAAGGACGACTCCACTACCG 59.829 60.000 0.00 0.00 39.39 4.02 F
1319 1585 1.057851 TCACCCCTGGAGAAAACCGT 61.058 55.000 0.00 0.00 0.00 4.83 F
1876 2150 0.461961 GGCTGAGTATCTTGCGGACT 59.538 55.000 0.00 0.00 36.46 3.85 F
2800 4852 1.202639 TGTCGTTGCCATGTCACTTCT 60.203 47.619 0.00 0.00 0.00 2.85 F
2801 4853 2.036604 TGTCGTTGCCATGTCACTTCTA 59.963 45.455 0.00 0.00 0.00 2.10 F
3443 5855 2.041081 ACTTAAACATGCCAGTGCCCTA 59.959 45.455 0.00 0.00 36.33 3.53 F
5090 8505 0.911769 TGTACCAATAGCTGCTGCCT 59.088 50.000 13.43 2.55 40.80 4.75 F
6174 11235 0.761187 TAGCAGCCATCCACAGATCC 59.239 55.000 0.00 0.00 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1854 2120 0.176680 CCGCAAGATACTCAGCCACT 59.823 55.000 0.00 0.00 43.02 4.00 R
2970 5362 3.001736 GCAGGCAAGCTTTAAGATACTCG 59.998 47.826 0.00 0.00 0.00 4.18 R
3423 5834 1.549203 AGGGCACTGGCATGTTTAAG 58.451 50.000 4.78 0.00 43.71 1.85 R
3807 6353 2.549754 CACGGGCAATCCAAGATATGTC 59.450 50.000 0.00 0.00 34.36 3.06 R
4230 7040 4.553156 GCATTGCCAGAAAAATGTTGTGTG 60.553 41.667 0.00 0.00 36.39 3.82 R
5225 8666 1.039856 GGCAAGCACTTTTCCTTCCA 58.960 50.000 0.00 0.00 0.00 3.53 R
6596 11749 0.041684 TGATGAGCTCCAGGAGGACA 59.958 55.000 18.83 4.19 39.61 4.02 R
7724 12965 0.029834 CGCCAAGCATGCTAATCACC 59.970 55.000 23.00 5.69 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.170561 CAAGGACGACTCCACTACCG 59.829 60.000 0.00 0.00 39.39 4.02
22 23 3.061260 GACGACTCCACTACCGGGC 62.061 68.421 6.32 0.00 0.00 6.13
278 281 5.567037 ATTGGTAGATCATTGAATCCGGA 57.433 39.130 6.61 6.61 0.00 5.14
371 390 5.679906 CGCATAATAAGCAATGAGGTACAC 58.320 41.667 0.00 0.00 0.00 2.90
386 405 2.422832 GGTACACTAGTCTTCCCTGACG 59.577 54.545 0.00 0.00 41.47 4.35
585 668 2.678336 GGTTCTGTTCCGGAGCTTAATG 59.322 50.000 19.73 4.94 0.00 1.90
628 723 3.493176 GCATGGGATTTACTTGCCATTCC 60.493 47.826 0.00 0.00 44.54 3.01
662 757 7.437713 TTCTACTATGAGATGACCAAACCAT 57.562 36.000 0.00 0.00 0.00 3.55
767 862 4.344102 TCCTTTCTATTGGTGGGAGATACG 59.656 45.833 0.00 0.00 0.00 3.06
872 975 6.183361 ACCCTCCTGATCTATAATTGTGGAAC 60.183 42.308 0.00 0.00 37.35 3.62
1005 1192 3.631145 TTGCTCACAAGAAGCATGAAC 57.369 42.857 0.00 0.00 38.43 3.18
1078 1265 4.060038 CCTGATTATCTAGGCGTGTTGT 57.940 45.455 0.00 0.00 0.00 3.32
1109 1298 9.780413 CAATTCTTATTTCTTACTGCTCTTTCC 57.220 33.333 0.00 0.00 0.00 3.13
1158 1347 2.686405 CTGCATTGCTCATAGCCAAAGA 59.314 45.455 10.49 0.00 41.51 2.52
1305 1571 4.487714 TCAGACTATGGTTTCATCACCC 57.512 45.455 0.00 0.00 35.73 4.61
1319 1585 1.057851 TCACCCCTGGAGAAAACCGT 61.058 55.000 0.00 0.00 0.00 4.83
1745 2011 4.047125 CGGTTCCACATGGGGCCT 62.047 66.667 9.95 0.00 37.22 5.19
1776 2042 7.933033 ACGGTTCAGTAATCAGGTTAGTTTTTA 59.067 33.333 0.00 0.00 0.00 1.52
1876 2150 0.461961 GGCTGAGTATCTTGCGGACT 59.538 55.000 0.00 0.00 36.46 3.85
1881 2155 4.268884 GCTGAGTATCTTGCGGACTAAAAG 59.731 45.833 0.00 0.00 34.92 2.27
1882 2156 4.755411 TGAGTATCTTGCGGACTAAAAGG 58.245 43.478 0.00 0.00 34.92 3.11
1884 2158 5.046878 TGAGTATCTTGCGGACTAAAAGGAA 60.047 40.000 0.00 0.00 34.92 3.36
1910 2212 2.444421 AGGACTGTAGACTGTAACCGG 58.556 52.381 0.00 0.00 0.00 5.28
1927 2229 4.432980 ACCGGTGCTTTTAGCCTTATAT 57.567 40.909 6.12 0.00 41.51 0.86
1928 2230 4.788679 ACCGGTGCTTTTAGCCTTATATT 58.211 39.130 6.12 0.00 41.51 1.28
2542 2851 6.726299 TCCTGGAGATGGTATGGATTTACTAG 59.274 42.308 0.00 0.00 0.00 2.57
2656 4672 6.642540 GCAGAAGTTTATTTTTCAACCCTGAG 59.357 38.462 0.00 0.00 31.09 3.35
2798 4850 1.896220 ATGTCGTTGCCATGTCACTT 58.104 45.000 0.00 0.00 0.00 3.16
2799 4851 1.225855 TGTCGTTGCCATGTCACTTC 58.774 50.000 0.00 0.00 0.00 3.01
2800 4852 1.202639 TGTCGTTGCCATGTCACTTCT 60.203 47.619 0.00 0.00 0.00 2.85
2801 4853 2.036604 TGTCGTTGCCATGTCACTTCTA 59.963 45.455 0.00 0.00 0.00 2.10
2850 5239 6.833041 TCCCTCTGTAACAAAATGTAAGACA 58.167 36.000 0.00 0.00 0.00 3.41
3423 5834 5.297776 CCCATCATCATTTCTTACTGTGGAC 59.702 44.000 0.00 0.00 0.00 4.02
3426 5837 7.770433 CCATCATCATTTCTTACTGTGGACTTA 59.230 37.037 0.00 0.00 0.00 2.24
3443 5855 2.041081 ACTTAAACATGCCAGTGCCCTA 59.959 45.455 0.00 0.00 36.33 3.53
3807 6353 3.543680 TCTTCTTAGAATCAAGGCGGG 57.456 47.619 0.00 0.00 0.00 6.13
3918 6466 2.171003 CTTCCCCATTTGTCTTCACCC 58.829 52.381 0.00 0.00 0.00 4.61
4127 6913 6.073447 TCTGTTATTCCTTGCAGGGATTTA 57.927 37.500 19.53 10.82 34.67 1.40
4178 6964 3.740832 CGAATTTTCTTGGGCAACTTTCC 59.259 43.478 0.00 0.00 0.00 3.13
4230 7040 6.881602 ACTTATCTGTTTGTCCTTGAATCTCC 59.118 38.462 0.00 0.00 0.00 3.71
4257 7071 5.221501 ACAACATTTTTCTGGCAATGCTACT 60.222 36.000 4.82 0.00 34.26 2.57
4573 7435 8.389603 TGCTTTTCAATTTCTTTGATTGTTCAC 58.610 29.630 0.00 0.00 43.73 3.18
4581 7444 9.796120 AATTTCTTTGATTGTTCACTCGTAAAA 57.204 25.926 0.00 0.00 0.00 1.52
4977 8389 8.908903 TGACTAACCTTGTACATTTTGAATTGT 58.091 29.630 0.00 0.00 0.00 2.71
5090 8505 0.911769 TGTACCAATAGCTGCTGCCT 59.088 50.000 13.43 2.55 40.80 4.75
5176 8599 7.809806 CAGATGGAAGTAATGGTTTCTGTTTTC 59.190 37.037 0.00 0.00 0.00 2.29
5290 8735 1.393883 GCTAAGCGAAACACTACTGGC 59.606 52.381 0.00 0.00 0.00 4.85
5300 8745 5.428253 GAAACACTACTGGCCATGAAGATA 58.572 41.667 5.51 0.00 0.00 1.98
5499 8972 5.635120 AGAGTTTCTGGCTGAGGTAAAAAT 58.365 37.500 0.00 0.00 0.00 1.82
5530 9004 8.492673 TCAATGTGAAGAAGTTATACATGTCC 57.507 34.615 0.00 0.00 32.75 4.02
5584 9063 2.158593 TGTCTCGTTCCCCCAAATTTCA 60.159 45.455 0.00 0.00 0.00 2.69
5784 10256 7.867403 TCATCACAAGAATTTAGTTTCTTTGGC 59.133 33.333 0.00 0.00 41.95 4.52
5964 10516 8.706492 ATTTGAACGACGGAACTATTACATTA 57.294 30.769 0.00 0.00 0.00 1.90
6117 11178 3.123620 CTCAGTTGGGAGCAGCGC 61.124 66.667 0.00 0.00 0.00 5.92
6169 11230 2.624495 AGGATATAGCAGCCATCCACA 58.376 47.619 16.78 0.00 40.67 4.17
6170 11231 2.570752 AGGATATAGCAGCCATCCACAG 59.429 50.000 16.78 0.00 40.67 3.66
6171 11232 2.568956 GGATATAGCAGCCATCCACAGA 59.431 50.000 11.70 0.00 38.50 3.41
6172 11233 3.199508 GGATATAGCAGCCATCCACAGAT 59.800 47.826 11.70 0.00 38.50 2.90
6173 11234 2.855209 ATAGCAGCCATCCACAGATC 57.145 50.000 0.00 0.00 0.00 2.75
6174 11235 0.761187 TAGCAGCCATCCACAGATCC 59.239 55.000 0.00 0.00 0.00 3.36
6175 11236 1.225426 GCAGCCATCCACAGATCCA 59.775 57.895 0.00 0.00 0.00 3.41
6176 11237 1.099879 GCAGCCATCCACAGATCCAC 61.100 60.000 0.00 0.00 0.00 4.02
6368 11434 3.733709 CCTGACCAAGGCTTTCAGT 57.266 52.632 21.47 10.25 39.93 3.41
6447 11513 2.797156 GAGTACGTCATGCACATCATCC 59.203 50.000 0.00 0.00 31.79 3.51
6483 11627 9.429359 CCTATGTATCCACTTGTCTTCAATATC 57.571 37.037 0.00 0.00 32.82 1.63
6548 11701 4.760204 GTCTACCAATTGTGCAGGTACTTT 59.240 41.667 4.43 0.00 34.60 2.66
6596 11749 0.179029 ACCTGTACAGCTTTGGCGTT 60.179 50.000 17.86 0.00 44.37 4.84
6638 11791 2.452064 CCATGCCCCGGTCATACCT 61.452 63.158 0.00 0.00 35.66 3.08
6643 11796 2.692024 TGCCCCGGTCATACCTATTAA 58.308 47.619 0.00 0.00 35.66 1.40
6928 12081 2.716017 CGACCTGTCCTGGAGAGGC 61.716 68.421 33.35 25.03 45.59 4.70
7052 12228 0.739112 CTGGAGGTTTGAGCGCTCTC 60.739 60.000 35.27 24.07 39.78 3.20
7080 12256 3.134458 CCTTTCTGATAAGCCGTCATCC 58.866 50.000 0.00 0.00 0.00 3.51
7174 12354 7.463961 AGAATTGTGATGAAAGAAGCTCAAT 57.536 32.000 0.00 0.00 0.00 2.57
7212 12403 0.893727 ATGTTCTGGTTTGGACGGCC 60.894 55.000 0.00 0.00 0.00 6.13
7216 12407 4.966787 TGGTTTGGACGGCCTGCC 62.967 66.667 9.82 8.80 34.31 4.85
7330 12538 3.741830 TTTGACGAGGTGCACGCCA 62.742 57.895 11.45 0.00 0.00 5.69
7408 12639 1.118965 TCCGGCTGGTCTCACTTCAA 61.119 55.000 12.43 0.00 36.30 2.69
7442 12673 2.890847 GATCCTGTGTCACGGCCTCG 62.891 65.000 6.25 0.00 43.02 4.63
7470 12711 2.352960 GGCTTAAGAGACAAATCAGCCG 59.647 50.000 6.67 0.00 36.27 5.52
7471 12712 3.003480 GCTTAAGAGACAAATCAGCCGT 58.997 45.455 6.67 0.00 0.00 5.68
7474 12715 2.086054 AGAGACAAATCAGCCGTGTC 57.914 50.000 0.00 0.00 41.62 3.67
7501 12742 5.829391 TGACATGGATCAATCAGGGTTTATG 59.171 40.000 0.00 0.00 0.00 1.90
7507 12748 0.923358 AATCAGGGTTTATGGCGGGA 59.077 50.000 0.00 0.00 0.00 5.14
7547 12788 4.101898 TGCGGAAGGCCTCTATTATTTGTA 59.898 41.667 5.23 0.00 42.61 2.41
7550 12791 5.696724 CGGAAGGCCTCTATTATTTGTAGTG 59.303 44.000 5.23 0.00 0.00 2.74
7551 12792 6.592870 GGAAGGCCTCTATTATTTGTAGTGT 58.407 40.000 5.23 0.00 0.00 3.55
7552 12793 7.054751 GGAAGGCCTCTATTATTTGTAGTGTT 58.945 38.462 5.23 0.00 0.00 3.32
7553 12794 7.556635 GGAAGGCCTCTATTATTTGTAGTGTTT 59.443 37.037 5.23 0.00 0.00 2.83
7554 12795 8.879427 AAGGCCTCTATTATTTGTAGTGTTTT 57.121 30.769 5.23 0.00 0.00 2.43
7555 12796 9.969001 AAGGCCTCTATTATTTGTAGTGTTTTA 57.031 29.630 5.23 0.00 0.00 1.52
7556 12797 9.969001 AGGCCTCTATTATTTGTAGTGTTTTAA 57.031 29.630 0.00 0.00 0.00 1.52
7565 12806 4.950434 TGTAGTGTTTTAAATAGCGGGC 57.050 40.909 0.00 0.00 0.00 6.13
7566 12807 4.581868 TGTAGTGTTTTAAATAGCGGGCT 58.418 39.130 0.00 0.00 0.00 5.19
7567 12808 5.732633 TGTAGTGTTTTAAATAGCGGGCTA 58.267 37.500 2.42 2.42 0.00 3.93
7568 12809 6.350906 TGTAGTGTTTTAAATAGCGGGCTAT 58.649 36.000 7.36 7.36 40.63 2.97
7569 12810 5.751243 AGTGTTTTAAATAGCGGGCTATG 57.249 39.130 13.53 0.00 39.03 2.23
7570 12811 4.578928 AGTGTTTTAAATAGCGGGCTATGG 59.421 41.667 13.53 0.00 39.03 2.74
7571 12812 3.316868 TGTTTTAAATAGCGGGCTATGGC 59.683 43.478 13.53 0.00 39.03 4.40
7572 12813 2.940994 TTAAATAGCGGGCTATGGCA 57.059 45.000 13.53 0.00 39.03 4.92
7573 12814 2.940994 TAAATAGCGGGCTATGGCAA 57.059 45.000 13.53 0.00 39.03 4.52
7574 12815 2.292828 AAATAGCGGGCTATGGCAAT 57.707 45.000 13.53 0.00 39.03 3.56
7575 12816 3.433306 AAATAGCGGGCTATGGCAATA 57.567 42.857 13.53 0.00 39.03 1.90
7576 12817 3.652057 AATAGCGGGCTATGGCAATAT 57.348 42.857 13.53 0.00 39.03 1.28
7577 12818 4.771114 AATAGCGGGCTATGGCAATATA 57.229 40.909 13.53 0.00 39.03 0.86
7578 12819 2.698855 AGCGGGCTATGGCAATATAG 57.301 50.000 2.58 0.00 40.87 1.31
7579 12820 1.909302 AGCGGGCTATGGCAATATAGT 59.091 47.619 2.58 0.00 40.87 2.12
7580 12821 2.009774 GCGGGCTATGGCAATATAGTG 58.990 52.381 2.58 0.00 40.87 2.74
7581 12822 2.632377 CGGGCTATGGCAATATAGTGG 58.368 52.381 2.58 0.00 40.87 4.00
7582 12823 2.369394 GGGCTATGGCAATATAGTGGC 58.631 52.381 18.75 18.75 44.09 5.01
7601 12842 5.782893 TGGCAACACTTAAAAACAGCTAT 57.217 34.783 0.00 0.00 46.17 2.97
7602 12843 6.885952 TGGCAACACTTAAAAACAGCTATA 57.114 33.333 0.00 0.00 46.17 1.31
7603 12844 6.908825 TGGCAACACTTAAAAACAGCTATAG 58.091 36.000 0.00 0.00 46.17 1.31
7604 12845 5.800438 GGCAACACTTAAAAACAGCTATAGC 59.200 40.000 17.33 17.33 42.49 2.97
7618 12859 3.377656 TAGCTGGGCTATAGCGGC 58.622 61.111 18.30 19.74 45.61 6.53
7619 12860 1.533033 TAGCTGGGCTATAGCGGCA 60.533 57.895 26.14 15.52 45.61 5.69
7620 12861 1.118965 TAGCTGGGCTATAGCGGCAA 61.119 55.000 26.14 11.09 45.61 4.52
7621 12862 1.525995 GCTGGGCTATAGCGGCAAA 60.526 57.895 18.30 1.50 43.26 3.68
7622 12863 0.890996 GCTGGGCTATAGCGGCAAAT 60.891 55.000 18.30 0.00 43.26 2.32
7623 12864 1.609208 CTGGGCTATAGCGGCAAATT 58.391 50.000 18.30 0.00 43.26 1.82
7624 12865 1.267806 CTGGGCTATAGCGGCAAATTG 59.732 52.381 18.30 0.00 43.26 2.32
7625 12866 1.318576 GGGCTATAGCGGCAAATTGT 58.681 50.000 18.30 0.00 43.26 2.71
7626 12867 2.158740 TGGGCTATAGCGGCAAATTGTA 60.159 45.455 18.30 0.00 43.26 2.41
7627 12868 2.225727 GGGCTATAGCGGCAAATTGTAC 59.774 50.000 18.30 0.00 43.26 2.90
7628 12869 2.875933 GGCTATAGCGGCAAATTGTACA 59.124 45.455 18.30 0.00 43.26 2.90
7629 12870 3.502211 GGCTATAGCGGCAAATTGTACAT 59.498 43.478 18.30 0.00 43.26 2.29
7630 12871 4.466828 GCTATAGCGGCAAATTGTACATG 58.533 43.478 9.40 0.00 0.00 3.21
7631 12872 4.213270 GCTATAGCGGCAAATTGTACATGA 59.787 41.667 9.40 0.00 0.00 3.07
7632 12873 5.277779 GCTATAGCGGCAAATTGTACATGAA 60.278 40.000 9.40 0.00 0.00 2.57
7633 12874 3.932545 AGCGGCAAATTGTACATGAAA 57.067 38.095 0.00 0.00 0.00 2.69
7634 12875 4.454728 AGCGGCAAATTGTACATGAAAT 57.545 36.364 0.00 0.00 0.00 2.17
7635 12876 4.423732 AGCGGCAAATTGTACATGAAATC 58.576 39.130 0.00 0.00 0.00 2.17
7636 12877 4.082300 AGCGGCAAATTGTACATGAAATCA 60.082 37.500 0.00 0.00 0.00 2.57
7637 12878 4.805192 GCGGCAAATTGTACATGAAATCAT 59.195 37.500 0.00 0.00 36.96 2.45
7638 12879 5.291614 GCGGCAAATTGTACATGAAATCATT 59.708 36.000 0.00 0.00 33.61 2.57
7639 12880 6.183360 GCGGCAAATTGTACATGAAATCATTT 60.183 34.615 0.00 0.00 33.61 2.32
7640 12881 7.009999 GCGGCAAATTGTACATGAAATCATTTA 59.990 33.333 0.00 0.00 33.61 1.40
7641 12882 9.033481 CGGCAAATTGTACATGAAATCATTTAT 57.967 29.630 0.00 0.00 33.61 1.40
7645 12886 8.801715 AATTGTACATGAAATCATTTATCGGC 57.198 30.769 0.00 0.00 33.61 5.54
7646 12887 6.934048 TGTACATGAAATCATTTATCGGCA 57.066 33.333 0.00 0.00 33.61 5.69
7647 12888 7.326968 TGTACATGAAATCATTTATCGGCAA 57.673 32.000 0.00 0.00 33.61 4.52
7648 12889 7.192913 TGTACATGAAATCATTTATCGGCAAC 58.807 34.615 0.00 0.00 33.61 4.17
7649 12890 6.206395 ACATGAAATCATTTATCGGCAACA 57.794 33.333 0.00 0.00 33.61 3.33
7650 12891 6.808829 ACATGAAATCATTTATCGGCAACAT 58.191 32.000 0.00 0.00 33.61 2.71
7651 12892 6.698329 ACATGAAATCATTTATCGGCAACATG 59.302 34.615 0.00 0.00 37.06 3.21
7652 12893 5.042593 TGAAATCATTTATCGGCAACATGC 58.957 37.500 0.00 0.00 44.08 4.06
7653 12894 4.924305 AATCATTTATCGGCAACATGCT 57.076 36.364 2.00 0.00 44.28 3.79
7654 12895 3.969117 TCATTTATCGGCAACATGCTC 57.031 42.857 2.00 0.00 44.28 4.26
7655 12896 3.277715 TCATTTATCGGCAACATGCTCA 58.722 40.909 2.00 0.00 44.28 4.26
7656 12897 3.693578 TCATTTATCGGCAACATGCTCAA 59.306 39.130 2.00 0.00 44.28 3.02
7657 12898 4.157472 TCATTTATCGGCAACATGCTCAAA 59.843 37.500 2.00 0.00 44.28 2.69
7658 12899 3.485947 TTATCGGCAACATGCTCAAAC 57.514 42.857 2.00 0.00 44.28 2.93
7659 12900 1.246649 ATCGGCAACATGCTCAAACA 58.753 45.000 2.00 0.00 44.28 2.83
7660 12901 1.028130 TCGGCAACATGCTCAAACAA 58.972 45.000 2.00 0.00 44.28 2.83
7661 12902 1.130955 CGGCAACATGCTCAAACAAC 58.869 50.000 2.00 0.00 44.28 3.32
7662 12903 1.269206 CGGCAACATGCTCAAACAACT 60.269 47.619 2.00 0.00 44.28 3.16
7663 12904 2.031245 CGGCAACATGCTCAAACAACTA 60.031 45.455 2.00 0.00 44.28 2.24
7664 12905 3.366273 CGGCAACATGCTCAAACAACTAT 60.366 43.478 2.00 0.00 44.28 2.12
7665 12906 4.142708 CGGCAACATGCTCAAACAACTATA 60.143 41.667 2.00 0.00 44.28 1.31
7666 12907 5.335127 GGCAACATGCTCAAACAACTATAG 58.665 41.667 0.00 0.00 44.28 1.31
7667 12908 4.795278 GCAACATGCTCAAACAACTATAGC 59.205 41.667 0.00 0.00 40.96 2.97
7668 12909 4.864916 ACATGCTCAAACAACTATAGCG 57.135 40.909 0.00 0.00 35.95 4.26
7669 12910 3.623060 ACATGCTCAAACAACTATAGCGG 59.377 43.478 0.00 0.00 35.95 5.52
7670 12911 2.627945 TGCTCAAACAACTATAGCGGG 58.372 47.619 0.00 0.00 35.95 6.13
7671 12912 1.940613 GCTCAAACAACTATAGCGGGG 59.059 52.381 0.00 0.00 0.00 5.73
7672 12913 1.940613 CTCAAACAACTATAGCGGGGC 59.059 52.381 0.00 0.00 0.00 5.80
7673 12914 1.557832 TCAAACAACTATAGCGGGGCT 59.442 47.619 0.00 0.00 43.41 5.19
7674 12915 2.767394 TCAAACAACTATAGCGGGGCTA 59.233 45.455 0.00 0.00 45.55 3.93
7697 12938 9.635520 GCTATAGCCGACTATTTAAAACTATGA 57.364 33.333 14.13 0.00 39.81 2.15
7719 12960 7.009568 TGATTATTTGTTGTTGTTGTTTGGC 57.990 32.000 0.00 0.00 0.00 4.52
7720 12961 5.456192 TTATTTGTTGTTGTTGTTTGGCG 57.544 34.783 0.00 0.00 0.00 5.69
7721 12962 1.714794 TTGTTGTTGTTGTTTGGCGG 58.285 45.000 0.00 0.00 0.00 6.13
7722 12963 0.888619 TGTTGTTGTTGTTTGGCGGA 59.111 45.000 0.00 0.00 0.00 5.54
7723 12964 1.272490 TGTTGTTGTTGTTTGGCGGAA 59.728 42.857 0.00 0.00 0.00 4.30
7724 12965 1.923864 GTTGTTGTTGTTTGGCGGAAG 59.076 47.619 0.00 0.00 0.00 3.46
7725 12966 0.457851 TGTTGTTGTTTGGCGGAAGG 59.542 50.000 0.00 0.00 0.00 3.46
7726 12967 0.458260 GTTGTTGTTTGGCGGAAGGT 59.542 50.000 0.00 0.00 0.00 3.50
7727 12968 0.457851 TTGTTGTTTGGCGGAAGGTG 59.542 50.000 0.00 0.00 0.00 4.00
7728 12969 0.394488 TGTTGTTTGGCGGAAGGTGA 60.394 50.000 0.00 0.00 0.00 4.02
7729 12970 0.958822 GTTGTTTGGCGGAAGGTGAT 59.041 50.000 0.00 0.00 0.00 3.06
7730 12971 1.339929 GTTGTTTGGCGGAAGGTGATT 59.660 47.619 0.00 0.00 0.00 2.57
7731 12972 2.554893 GTTGTTTGGCGGAAGGTGATTA 59.445 45.455 0.00 0.00 0.00 1.75
7732 12973 2.432444 TGTTTGGCGGAAGGTGATTAG 58.568 47.619 0.00 0.00 0.00 1.73
7733 12974 1.132453 GTTTGGCGGAAGGTGATTAGC 59.868 52.381 0.00 0.00 0.00 3.09
7734 12975 0.326595 TTGGCGGAAGGTGATTAGCA 59.673 50.000 0.00 0.00 0.00 3.49
7735 12976 0.546122 TGGCGGAAGGTGATTAGCAT 59.454 50.000 0.00 0.00 0.00 3.79
7736 12977 0.947244 GGCGGAAGGTGATTAGCATG 59.053 55.000 0.00 0.00 0.00 4.06
7737 12978 0.308993 GCGGAAGGTGATTAGCATGC 59.691 55.000 10.51 10.51 0.00 4.06
7738 12979 1.959042 CGGAAGGTGATTAGCATGCT 58.041 50.000 25.99 25.99 0.00 3.79
7739 12980 2.292267 CGGAAGGTGATTAGCATGCTT 58.708 47.619 28.02 8.95 0.00 3.91
7740 12981 2.032550 CGGAAGGTGATTAGCATGCTTG 59.967 50.000 28.02 0.00 0.00 4.01
7741 12982 2.360165 GGAAGGTGATTAGCATGCTTGG 59.640 50.000 28.02 0.00 0.00 3.61
7742 12983 1.396653 AGGTGATTAGCATGCTTGGC 58.603 50.000 28.02 15.30 0.00 4.52
7743 12984 0.029834 GGTGATTAGCATGCTTGGCG 59.970 55.000 28.02 0.00 36.08 5.69
7744 12985 0.734889 GTGATTAGCATGCTTGGCGT 59.265 50.000 28.02 7.60 36.08 5.68
7745 12986 1.133025 GTGATTAGCATGCTTGGCGTT 59.867 47.619 28.02 1.31 36.08 4.84
7746 12987 1.401552 TGATTAGCATGCTTGGCGTTC 59.598 47.619 28.02 13.65 36.08 3.95
7747 12988 0.378257 ATTAGCATGCTTGGCGTTCG 59.622 50.000 28.02 0.00 36.08 3.95
7748 12989 1.643868 TTAGCATGCTTGGCGTTCGG 61.644 55.000 28.02 0.00 36.08 4.30
7749 12990 4.481112 GCATGCTTGGCGTTCGGG 62.481 66.667 11.37 0.00 0.00 5.14
7750 12991 4.481112 CATGCTTGGCGTTCGGGC 62.481 66.667 0.00 0.00 42.69 6.13
7757 12998 3.580916 GGCGTTCGGGCATGTTTA 58.419 55.556 0.00 0.00 41.77 2.01
7758 12999 1.427819 GGCGTTCGGGCATGTTTAG 59.572 57.895 0.00 0.00 41.77 1.85
7759 13000 1.226295 GCGTTCGGGCATGTTTAGC 60.226 57.895 0.00 0.00 0.00 3.09
7760 13001 1.917782 GCGTTCGGGCATGTTTAGCA 61.918 55.000 0.00 0.00 0.00 3.49
7761 13002 0.732571 CGTTCGGGCATGTTTAGCAT 59.267 50.000 0.00 0.00 38.60 3.79
7771 13012 3.932545 ATGTTTAGCATGTTTGGCGAA 57.067 38.095 0.00 0.00 36.26 4.70
7772 13013 3.717400 TGTTTAGCATGTTTGGCGAAA 57.283 38.095 0.00 0.00 34.27 3.46
7773 13014 3.637432 TGTTTAGCATGTTTGGCGAAAG 58.363 40.909 0.00 0.00 36.71 2.62
7774 13015 5.380573 ATGTTTAGCATGTTTGGCGAAAGC 61.381 41.667 0.00 0.00 46.87 3.51
7788 13029 1.324736 CGAAAGCCACTAATCTCGTGC 59.675 52.381 0.00 0.00 0.00 5.34
7789 13030 2.622436 GAAAGCCACTAATCTCGTGCT 58.378 47.619 0.00 0.00 0.00 4.40
7790 13031 2.770164 AAGCCACTAATCTCGTGCTT 57.230 45.000 0.00 0.00 0.00 3.91
7791 13032 2.301577 AGCCACTAATCTCGTGCTTC 57.698 50.000 0.00 0.00 0.00 3.86
7792 13033 1.550524 AGCCACTAATCTCGTGCTTCA 59.449 47.619 0.00 0.00 0.00 3.02
7793 13034 2.169352 AGCCACTAATCTCGTGCTTCAT 59.831 45.455 0.00 0.00 0.00 2.57
7794 13035 2.286294 GCCACTAATCTCGTGCTTCATG 59.714 50.000 0.00 0.00 0.00 3.07
7795 13036 2.286294 CCACTAATCTCGTGCTTCATGC 59.714 50.000 0.00 0.00 43.25 4.06
7807 13048 3.029320 GCTTCATGCATGTTTGGTTGA 57.971 42.857 25.43 2.14 42.31 3.18
7808 13049 3.391965 GCTTCATGCATGTTTGGTTGAA 58.608 40.909 25.43 10.42 42.31 2.69
7809 13050 3.430895 GCTTCATGCATGTTTGGTTGAAG 59.569 43.478 25.43 19.56 41.72 3.02
7810 13051 3.029320 TCATGCATGTTTGGTTGAAGC 57.971 42.857 25.43 0.00 0.00 3.86
7811 13052 2.070783 CATGCATGTTTGGTTGAAGCC 58.929 47.619 18.91 0.00 0.00 4.35
7812 13053 1.117994 TGCATGTTTGGTTGAAGCCA 58.882 45.000 0.00 0.00 36.62 4.75
7813 13054 1.202510 TGCATGTTTGGTTGAAGCCAC 60.203 47.619 0.00 0.00 38.42 5.01
7814 13055 1.069049 GCATGTTTGGTTGAAGCCACT 59.931 47.619 0.00 0.00 38.42 4.00
7815 13056 2.295909 GCATGTTTGGTTGAAGCCACTA 59.704 45.455 0.00 0.00 38.42 2.74
7816 13057 3.243704 GCATGTTTGGTTGAAGCCACTAA 60.244 43.478 0.00 0.00 38.42 2.24
7817 13058 4.298332 CATGTTTGGTTGAAGCCACTAAC 58.702 43.478 0.00 0.00 38.42 2.34
7818 13059 2.691011 TGTTTGGTTGAAGCCACTAACC 59.309 45.455 0.00 0.00 43.20 2.85
7822 13063 1.611977 GGTTGAAGCCACTAACCAACC 59.388 52.381 0.00 0.00 46.41 3.77
7823 13064 2.583143 GTTGAAGCCACTAACCAACCT 58.417 47.619 0.00 0.00 33.13 3.50
7824 13065 2.956333 GTTGAAGCCACTAACCAACCTT 59.044 45.455 0.00 0.00 33.13 3.50
7825 13066 2.582052 TGAAGCCACTAACCAACCTTG 58.418 47.619 0.00 0.00 0.00 3.61
7826 13067 2.173782 TGAAGCCACTAACCAACCTTGA 59.826 45.455 0.00 0.00 0.00 3.02
7827 13068 2.271944 AGCCACTAACCAACCTTGAC 57.728 50.000 0.00 0.00 0.00 3.18
7828 13069 1.774856 AGCCACTAACCAACCTTGACT 59.225 47.619 0.00 0.00 0.00 3.41
7829 13070 2.174854 AGCCACTAACCAACCTTGACTT 59.825 45.455 0.00 0.00 0.00 3.01
7830 13071 2.293399 GCCACTAACCAACCTTGACTTG 59.707 50.000 0.00 0.00 0.00 3.16
7831 13072 2.293399 CCACTAACCAACCTTGACTTGC 59.707 50.000 0.00 0.00 0.00 4.01
7832 13073 3.214328 CACTAACCAACCTTGACTTGCT 58.786 45.455 0.00 0.00 0.00 3.91
7833 13074 3.632145 CACTAACCAACCTTGACTTGCTT 59.368 43.478 0.00 0.00 0.00 3.91
7834 13075 3.883489 ACTAACCAACCTTGACTTGCTTC 59.117 43.478 0.00 0.00 0.00 3.86
7835 13076 2.435372 ACCAACCTTGACTTGCTTCA 57.565 45.000 0.00 0.00 0.00 3.02
7836 13077 2.024414 ACCAACCTTGACTTGCTTCAC 58.976 47.619 0.00 0.00 0.00 3.18
7837 13078 2.023673 CCAACCTTGACTTGCTTCACA 58.976 47.619 0.00 0.00 0.00 3.58
7838 13079 2.624838 CCAACCTTGACTTGCTTCACAT 59.375 45.455 0.00 0.00 0.00 3.21
7839 13080 3.551454 CCAACCTTGACTTGCTTCACATG 60.551 47.826 0.00 0.00 0.00 3.21
7840 13081 2.233271 ACCTTGACTTGCTTCACATGG 58.767 47.619 0.00 0.00 34.95 3.66
7841 13082 2.233271 CCTTGACTTGCTTCACATGGT 58.767 47.619 0.00 0.00 0.00 3.55
7842 13083 3.181445 ACCTTGACTTGCTTCACATGGTA 60.181 43.478 0.00 0.00 38.42 3.25
7843 13084 3.438087 CCTTGACTTGCTTCACATGGTAG 59.562 47.826 0.00 0.00 0.00 3.18
7844 13085 2.426522 TGACTTGCTTCACATGGTAGC 58.573 47.619 0.00 3.30 35.50 3.58
7845 13086 2.224499 TGACTTGCTTCACATGGTAGCA 60.224 45.455 12.75 12.75 42.71 3.49
7846 13087 3.012518 GACTTGCTTCACATGGTAGCAT 58.987 45.455 16.15 0.40 43.72 3.79
7847 13088 2.751259 ACTTGCTTCACATGGTAGCATG 59.249 45.455 28.72 28.72 43.72 4.06
7848 13089 2.495155 TGCTTCACATGGTAGCATGT 57.505 45.000 30.00 30.00 45.70 3.21
7849 13090 2.794103 TGCTTCACATGGTAGCATGTT 58.206 42.857 32.35 18.01 43.24 2.71
7850 13091 3.156293 TGCTTCACATGGTAGCATGTTT 58.844 40.909 32.35 14.09 43.24 2.83
7851 13092 3.573538 TGCTTCACATGGTAGCATGTTTT 59.426 39.130 32.35 13.40 43.24 2.43
7852 13093 4.764308 TGCTTCACATGGTAGCATGTTTTA 59.236 37.500 32.35 20.08 43.24 1.52
7853 13094 5.242615 TGCTTCACATGGTAGCATGTTTTAA 59.757 36.000 32.35 24.41 43.24 1.52
7854 13095 5.801947 GCTTCACATGGTAGCATGTTTTAAG 59.198 40.000 32.35 30.33 43.24 1.85
7855 13096 6.570378 GCTTCACATGGTAGCATGTTTTAAGT 60.570 38.462 32.35 11.33 43.24 2.24
7856 13097 7.361713 GCTTCACATGGTAGCATGTTTTAAGTA 60.362 37.037 32.35 16.44 43.24 2.24
7857 13098 7.609760 TCACATGGTAGCATGTTTTAAGTAG 57.390 36.000 32.35 20.36 43.24 2.57
7858 13099 7.165485 TCACATGGTAGCATGTTTTAAGTAGT 58.835 34.615 32.35 9.28 43.24 2.73
7859 13100 8.315482 TCACATGGTAGCATGTTTTAAGTAGTA 58.685 33.333 32.35 7.39 43.24 1.82
7860 13101 9.109393 CACATGGTAGCATGTTTTAAGTAGTAT 57.891 33.333 32.35 8.61 43.24 2.12
7901 13142 8.742554 AAAAGCATTACCTAAACAATTCTTCG 57.257 30.769 0.00 0.00 0.00 3.79
7902 13143 7.681939 AAGCATTACCTAAACAATTCTTCGA 57.318 32.000 0.00 0.00 0.00 3.71
7903 13144 7.681939 AGCATTACCTAAACAATTCTTCGAA 57.318 32.000 0.00 0.00 0.00 3.71
7904 13145 8.281212 AGCATTACCTAAACAATTCTTCGAAT 57.719 30.769 0.00 0.00 0.00 3.34
7905 13146 8.739972 AGCATTACCTAAACAATTCTTCGAATT 58.260 29.630 0.00 0.00 0.00 2.17
7906 13147 8.798153 GCATTACCTAAACAATTCTTCGAATTG 58.202 33.333 21.38 21.38 41.91 2.32
7909 13150 7.745620 ACCTAAACAATTCTTCGAATTGACT 57.254 32.000 26.88 17.96 39.36 3.41
7910 13151 8.166422 ACCTAAACAATTCTTCGAATTGACTT 57.834 30.769 26.88 21.31 39.36 3.01
7911 13152 8.076178 ACCTAAACAATTCTTCGAATTGACTTG 58.924 33.333 26.88 13.85 39.36 3.16
7912 13153 8.289618 CCTAAACAATTCTTCGAATTGACTTGA 58.710 33.333 26.88 10.88 39.36 3.02
7913 13154 9.663904 CTAAACAATTCTTCGAATTGACTTGAA 57.336 29.630 26.88 9.43 39.36 2.69
7914 13155 7.914537 AACAATTCTTCGAATTGACTTGAAC 57.085 32.000 26.88 0.00 39.36 3.18
7915 13156 6.438763 ACAATTCTTCGAATTGACTTGAACC 58.561 36.000 26.88 0.00 39.36 3.62
7916 13157 6.039270 ACAATTCTTCGAATTGACTTGAACCA 59.961 34.615 26.88 0.00 39.36 3.67
7917 13158 6.633500 ATTCTTCGAATTGACTTGAACCAA 57.367 33.333 0.00 0.00 0.00 3.67
7918 13159 6.443934 TTCTTCGAATTGACTTGAACCAAA 57.556 33.333 0.00 0.00 0.00 3.28
7919 13160 6.633500 TCTTCGAATTGACTTGAACCAAAT 57.367 33.333 0.00 0.00 0.00 2.32
7920 13161 7.737972 TCTTCGAATTGACTTGAACCAAATA 57.262 32.000 0.00 0.00 0.00 1.40
7921 13162 8.160521 TCTTCGAATTGACTTGAACCAAATAA 57.839 30.769 0.00 0.00 0.00 1.40
7922 13163 8.792633 TCTTCGAATTGACTTGAACCAAATAAT 58.207 29.630 0.00 0.00 0.00 1.28
7923 13164 9.410556 CTTCGAATTGACTTGAACCAAATAATT 57.589 29.630 0.00 0.00 0.00 1.40
7924 13165 9.757227 TTCGAATTGACTTGAACCAAATAATTT 57.243 25.926 0.00 0.00 0.00 1.82
7925 13166 9.190858 TCGAATTGACTTGAACCAAATAATTTG 57.809 29.630 0.00 0.00 40.32 2.32
7941 13182 9.835389 CAAATAATTTGGGATTTGTATGGATGT 57.165 29.630 4.04 0.00 37.96 3.06
7942 13183 9.835389 AAATAATTTGGGATTTGTATGGATGTG 57.165 29.630 0.00 0.00 0.00 3.21
7943 13184 4.734398 TTTGGGATTTGTATGGATGTGC 57.266 40.909 0.00 0.00 0.00 4.57
7944 13185 3.668141 TGGGATTTGTATGGATGTGCT 57.332 42.857 0.00 0.00 0.00 4.40
7945 13186 4.787135 TGGGATTTGTATGGATGTGCTA 57.213 40.909 0.00 0.00 0.00 3.49
7946 13187 4.717877 TGGGATTTGTATGGATGTGCTAG 58.282 43.478 0.00 0.00 0.00 3.42
7947 13188 3.503748 GGGATTTGTATGGATGTGCTAGC 59.496 47.826 8.10 8.10 0.00 3.42
7948 13189 4.136796 GGATTTGTATGGATGTGCTAGCA 58.863 43.478 14.93 14.93 0.00 3.49
7949 13190 4.214971 GGATTTGTATGGATGTGCTAGCAG 59.785 45.833 20.03 0.00 0.00 4.24
7950 13191 3.912496 TTGTATGGATGTGCTAGCAGT 57.088 42.857 20.03 10.24 0.00 4.40
7951 13192 3.912496 TGTATGGATGTGCTAGCAGTT 57.088 42.857 20.03 8.52 0.00 3.16
7952 13193 4.220693 TGTATGGATGTGCTAGCAGTTT 57.779 40.909 20.03 5.59 0.00 2.66
7953 13194 3.940852 TGTATGGATGTGCTAGCAGTTTG 59.059 43.478 20.03 0.00 0.00 2.93
7954 13195 2.857186 TGGATGTGCTAGCAGTTTGA 57.143 45.000 20.03 0.00 0.00 2.69
7955 13196 3.138884 TGGATGTGCTAGCAGTTTGAA 57.861 42.857 20.03 0.00 0.00 2.69
7956 13197 3.076621 TGGATGTGCTAGCAGTTTGAAG 58.923 45.455 20.03 0.00 0.00 3.02
7957 13198 3.077359 GGATGTGCTAGCAGTTTGAAGT 58.923 45.455 20.03 0.00 0.00 3.01
7958 13199 3.503748 GGATGTGCTAGCAGTTTGAAGTT 59.496 43.478 20.03 0.00 0.00 2.66
7959 13200 4.022849 GGATGTGCTAGCAGTTTGAAGTTT 60.023 41.667 20.03 0.00 0.00 2.66
7960 13201 4.291540 TGTGCTAGCAGTTTGAAGTTTG 57.708 40.909 20.03 0.00 0.00 2.93
7961 13202 3.944650 TGTGCTAGCAGTTTGAAGTTTGA 59.055 39.130 20.03 0.00 0.00 2.69
7962 13203 4.035558 TGTGCTAGCAGTTTGAAGTTTGAG 59.964 41.667 20.03 0.00 0.00 3.02
7963 13204 3.003689 TGCTAGCAGTTTGAAGTTTGAGC 59.996 43.478 14.93 0.00 0.00 4.26
7964 13205 3.610349 GCTAGCAGTTTGAAGTTTGAGCC 60.610 47.826 10.63 0.00 0.00 4.70
7965 13206 1.683385 AGCAGTTTGAAGTTTGAGCCC 59.317 47.619 0.00 0.00 0.00 5.19
7966 13207 1.408702 GCAGTTTGAAGTTTGAGCCCA 59.591 47.619 0.00 0.00 0.00 5.36
7967 13208 2.159114 GCAGTTTGAAGTTTGAGCCCAA 60.159 45.455 0.00 0.00 0.00 4.12
7968 13209 3.678529 GCAGTTTGAAGTTTGAGCCCAAA 60.679 43.478 0.00 0.00 39.74 3.28
7969 13210 4.114794 CAGTTTGAAGTTTGAGCCCAAAG 58.885 43.478 0.00 0.00 42.37 2.77
7970 13211 3.132824 AGTTTGAAGTTTGAGCCCAAAGG 59.867 43.478 0.00 0.00 42.37 3.11
7971 13212 2.452600 TGAAGTTTGAGCCCAAAGGT 57.547 45.000 0.00 0.00 42.37 3.50
7972 13213 3.586470 TGAAGTTTGAGCCCAAAGGTA 57.414 42.857 0.00 0.00 42.37 3.08
7973 13214 3.904717 TGAAGTTTGAGCCCAAAGGTAA 58.095 40.909 0.00 0.00 42.37 2.85
7974 13215 3.888930 TGAAGTTTGAGCCCAAAGGTAAG 59.111 43.478 0.00 0.00 42.37 2.34
7975 13216 2.876581 AGTTTGAGCCCAAAGGTAAGG 58.123 47.619 0.00 0.00 42.37 2.69
7982 13223 3.266240 CCAAAGGTAAGGGACAGGC 57.734 57.895 0.00 0.00 0.00 4.85
7983 13224 0.404040 CCAAAGGTAAGGGACAGGCA 59.596 55.000 0.00 0.00 0.00 4.75
7984 13225 1.203001 CCAAAGGTAAGGGACAGGCAA 60.203 52.381 0.00 0.00 0.00 4.52
7985 13226 2.593026 CAAAGGTAAGGGACAGGCAAA 58.407 47.619 0.00 0.00 0.00 3.68
7986 13227 2.962421 CAAAGGTAAGGGACAGGCAAAA 59.038 45.455 0.00 0.00 0.00 2.44
7987 13228 3.322191 AAGGTAAGGGACAGGCAAAAA 57.678 42.857 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.615424 ACTACCCGGCCAGTGGATT 60.615 57.895 15.20 0.00 0.00 3.01
371 390 4.641094 AGTGATAACGTCAGGGAAGACTAG 59.359 45.833 0.00 0.00 37.56 2.57
585 668 4.666237 GCCTCAAGCATTTCAGTGTATTC 58.334 43.478 0.00 0.00 42.97 1.75
662 757 4.421131 AGAAGAAAGGCTGTCCTCTCTTA 58.579 43.478 0.00 0.00 46.93 2.10
767 862 4.882671 ACAGTTTCGTCATGATAATGGC 57.117 40.909 0.00 0.00 29.46 4.40
796 898 4.150897 ACGCTCCAATAAGAAATGGCTA 57.849 40.909 0.00 0.00 36.62 3.93
872 975 5.404066 TCATATGCGTATTACGGTTGTCATG 59.596 40.000 17.26 3.93 42.82 3.07
1005 1192 2.928334 AGGAGAATTGCTGCACATAGG 58.072 47.619 0.00 0.00 37.43 2.57
1071 1258 5.880054 AATAAGAATTGAGGGACAACACG 57.120 39.130 0.00 0.00 41.52 4.49
1078 1265 7.633789 AGCAGTAAGAAATAAGAATTGAGGGA 58.366 34.615 0.00 0.00 0.00 4.20
1109 1298 6.086765 GCTTCACATTGTGTATTTTCTGAACG 59.913 38.462 16.06 0.00 34.79 3.95
1305 1571 0.609131 ATGCCACGGTTTTCTCCAGG 60.609 55.000 0.00 0.00 0.00 4.45
1319 1585 2.388735 ACGTAATCTGAGGAGATGCCA 58.611 47.619 0.00 0.00 39.04 4.92
1519 1785 2.911484 AGCTAACTTCATGCCAGTAGC 58.089 47.619 9.13 9.13 44.14 3.58
1745 2011 4.084287 ACCTGATTACTGAACCGTCTGTA 58.916 43.478 0.00 0.00 37.20 2.74
1808 2074 3.666883 TGGCGCTAACACATATTTTCG 57.333 42.857 7.64 0.00 0.00 3.46
1815 2081 2.401583 TCAAGATGGCGCTAACACAT 57.598 45.000 7.64 0.56 0.00 3.21
1817 2083 2.279741 TGATCAAGATGGCGCTAACAC 58.720 47.619 7.64 0.00 0.00 3.32
1854 2120 0.176680 CCGCAAGATACTCAGCCACT 59.823 55.000 0.00 0.00 43.02 4.00
1891 2193 2.094854 CACCGGTTACAGTCTACAGTCC 60.095 54.545 2.97 0.00 0.00 3.85
1927 2229 5.205056 ACCCTGTGGACAAAACTTATGAAA 58.795 37.500 0.00 0.00 34.81 2.69
1928 2230 4.798882 ACCCTGTGGACAAAACTTATGAA 58.201 39.130 0.00 0.00 34.81 2.57
2542 2851 7.623925 GCTCTGGAGTACGTACTAATATAGCAC 60.624 44.444 27.44 11.83 36.50 4.40
2798 4850 7.907389 ACTTCACAATCCTGAACTTACATAGA 58.093 34.615 0.00 0.00 0.00 1.98
2799 4851 9.823647 ATACTTCACAATCCTGAACTTACATAG 57.176 33.333 0.00 0.00 0.00 2.23
2801 4853 9.167311 GAATACTTCACAATCCTGAACTTACAT 57.833 33.333 0.00 0.00 0.00 2.29
2970 5362 3.001736 GCAGGCAAGCTTTAAGATACTCG 59.998 47.826 0.00 0.00 0.00 4.18
3423 5834 1.549203 AGGGCACTGGCATGTTTAAG 58.451 50.000 4.78 0.00 43.71 1.85
3426 5837 2.236489 AATAGGGCACTGGCATGTTT 57.764 45.000 0.00 0.00 43.71 2.83
3807 6353 2.549754 CACGGGCAATCCAAGATATGTC 59.450 50.000 0.00 0.00 34.36 3.06
3918 6466 9.401058 AGTTTTCTGACATATATTTTCCCTGAG 57.599 33.333 0.00 0.00 0.00 3.35
4230 7040 4.553156 GCATTGCCAGAAAAATGTTGTGTG 60.553 41.667 0.00 0.00 36.39 3.82
4421 7253 8.098286 AGCATTACTTAGTTACATGTTGGTGTA 58.902 33.333 2.30 0.00 33.62 2.90
4458 7293 4.747540 TTACTGACATGTGACATTGCAC 57.252 40.909 1.15 0.00 39.22 4.57
4977 8389 1.199615 TGCATTATCACCGACCCTGA 58.800 50.000 0.00 0.00 0.00 3.86
5176 8599 6.149633 GGAAATACAAAACTGTGTAAGGCAG 58.850 40.000 0.00 0.00 37.52 4.85
5219 8642 6.183360 GGCAAGCACTTTTCCTTCCATATAAT 60.183 38.462 0.00 0.00 0.00 1.28
5225 8666 1.039856 GGCAAGCACTTTTCCTTCCA 58.960 50.000 0.00 0.00 0.00 3.53
5290 8735 8.843262 TCAAGTAATGCTGATTTATCTTCATGG 58.157 33.333 0.00 0.00 0.00 3.66
5300 8745 5.245531 TCGGTTCTCAAGTAATGCTGATTT 58.754 37.500 0.00 0.00 0.00 2.17
5584 9063 5.932619 TTGTACACAGATGGCTACACTAT 57.067 39.130 0.00 0.00 0.00 2.12
5689 10161 9.766277 GTCTTTCAGATAATTTAAGCAGAACAG 57.234 33.333 0.00 0.00 0.00 3.16
5784 10256 0.610174 TCTGTCCTTGCAGTAGCCAG 59.390 55.000 0.00 0.00 41.13 4.85
5964 10516 8.421002 AGGTTTATGCAGTTTTTGTTTGAGTAT 58.579 29.630 0.00 0.00 0.00 2.12
5976 10528 8.806146 ACAGATAATTCAAGGTTTATGCAGTTT 58.194 29.630 0.00 0.00 0.00 2.66
6117 11178 1.590932 CATCAAGGGCGATCTGAAGG 58.409 55.000 0.00 0.00 0.00 3.46
6169 11230 4.551215 AATCTCAGGACCTAGTGGATCT 57.449 45.455 0.00 0.00 37.04 2.75
6170 11231 4.651503 TGAAATCTCAGGACCTAGTGGATC 59.348 45.833 0.00 0.00 37.04 3.36
6171 11232 4.624913 TGAAATCTCAGGACCTAGTGGAT 58.375 43.478 0.00 0.00 37.04 3.41
6172 11233 4.061131 TGAAATCTCAGGACCTAGTGGA 57.939 45.455 0.00 0.00 37.04 4.02
6173 11234 5.365021 AATGAAATCTCAGGACCTAGTGG 57.635 43.478 0.00 0.00 34.23 4.00
6174 11235 7.560368 AGTAAATGAAATCTCAGGACCTAGTG 58.440 38.462 0.00 0.00 34.23 2.74
6175 11236 7.147637 GGAGTAAATGAAATCTCAGGACCTAGT 60.148 40.741 0.00 0.00 34.23 2.57
6176 11237 7.070571 AGGAGTAAATGAAATCTCAGGACCTAG 59.929 40.741 0.00 0.00 34.23 3.02
6230 11296 6.256757 GCAGATACTCAAGACCTGTCATAAAC 59.743 42.308 0.00 0.00 0.00 2.01
6368 11434 5.172934 GTGGTTATATGTGTTTCGGAGTCA 58.827 41.667 0.00 0.00 0.00 3.41
6596 11749 0.041684 TGATGAGCTCCAGGAGGACA 59.958 55.000 18.83 4.19 39.61 4.02
6638 11791 5.471116 GTGGATGCTCATGCTGTCATTAATA 59.529 40.000 3.18 0.00 40.48 0.98
6643 11796 1.064979 TGTGGATGCTCATGCTGTCAT 60.065 47.619 3.18 0.00 40.48 3.06
7052 12228 3.797256 CGGCTTATCAGAAAGGTAAGACG 59.203 47.826 8.75 8.75 46.50 4.18
7080 12256 6.609237 TGAGAACATCACAAAGAAAGACAG 57.391 37.500 0.00 0.00 31.12 3.51
7151 12331 7.063074 CCAATTGAGCTTCTTTCATCACAATTC 59.937 37.037 7.12 0.00 35.51 2.17
7174 12354 9.627123 CAGAACATAAATTCCCTAGTAATCCAA 57.373 33.333 0.00 0.00 0.00 3.53
7216 12407 1.620819 ACACTGAGAAGCCTACCACTG 59.379 52.381 0.00 0.00 0.00 3.66
7221 12412 3.261137 ACCCTAAACACTGAGAAGCCTAC 59.739 47.826 0.00 0.00 0.00 3.18
7262 12467 4.553330 ACATGGACCAACTAAGACGAAT 57.447 40.909 0.00 0.00 0.00 3.34
7330 12538 2.261052 GTCGAGCTGAGCAGTGCT 59.739 61.111 19.86 19.86 43.88 4.40
7470 12711 3.684305 TGATTGATCCATGTCAACGACAC 59.316 43.478 0.00 0.00 45.65 3.67
7471 12712 3.934579 CTGATTGATCCATGTCAACGACA 59.065 43.478 1.17 0.00 46.90 4.35
7474 12715 2.615447 CCCTGATTGATCCATGTCAACG 59.385 50.000 1.17 0.00 40.60 4.10
7507 12748 2.930562 AACAGCGGCCTCCTCCTT 60.931 61.111 0.00 0.00 0.00 3.36
7547 12788 4.578928 CCATAGCCCGCTATTTAAAACACT 59.421 41.667 6.48 0.00 37.16 3.55
7550 12791 3.316868 TGCCATAGCCCGCTATTTAAAAC 59.683 43.478 6.48 0.00 37.16 2.43
7551 12792 3.556999 TGCCATAGCCCGCTATTTAAAA 58.443 40.909 6.48 0.00 37.16 1.52
7552 12793 3.216187 TGCCATAGCCCGCTATTTAAA 57.784 42.857 6.48 0.00 37.16 1.52
7553 12794 2.940994 TGCCATAGCCCGCTATTTAA 57.059 45.000 6.48 0.00 37.16 1.52
7554 12795 2.940994 TTGCCATAGCCCGCTATTTA 57.059 45.000 6.48 0.00 37.16 1.40
7555 12796 2.292828 ATTGCCATAGCCCGCTATTT 57.707 45.000 6.48 0.00 37.16 1.40
7556 12797 3.652057 ATATTGCCATAGCCCGCTATT 57.348 42.857 6.48 0.00 37.16 1.73
7557 12798 3.711704 ACTATATTGCCATAGCCCGCTAT 59.288 43.478 3.31 3.31 39.60 2.97
7558 12799 3.104512 ACTATATTGCCATAGCCCGCTA 58.895 45.455 0.00 0.00 38.69 4.26
7559 12800 1.909302 ACTATATTGCCATAGCCCGCT 59.091 47.619 0.00 0.00 38.69 5.52
7560 12801 2.009774 CACTATATTGCCATAGCCCGC 58.990 52.381 0.00 0.00 38.69 6.13
7561 12802 2.632377 CCACTATATTGCCATAGCCCG 58.368 52.381 0.00 0.00 38.69 6.13
7562 12803 2.290896 TGCCACTATATTGCCATAGCCC 60.291 50.000 0.00 0.00 38.69 5.19
7563 12804 3.071874 TGCCACTATATTGCCATAGCC 57.928 47.619 0.00 0.00 38.69 3.93
7564 12805 3.820467 TGTTGCCACTATATTGCCATAGC 59.180 43.478 0.00 0.00 40.48 2.97
7565 12806 5.362556 GTGTTGCCACTATATTGCCATAG 57.637 43.478 0.00 0.00 38.61 2.23
7578 12819 3.780902 AGCTGTTTTTAAGTGTTGCCAC 58.219 40.909 0.00 0.00 42.17 5.01
7579 12820 5.782893 ATAGCTGTTTTTAAGTGTTGCCA 57.217 34.783 0.00 0.00 0.00 4.92
7580 12821 5.800438 GCTATAGCTGTTTTTAAGTGTTGCC 59.200 40.000 17.75 0.00 38.21 4.52
7581 12822 6.854886 GCTATAGCTGTTTTTAAGTGTTGC 57.145 37.500 17.75 0.00 38.21 4.17
7601 12842 1.118965 TTGCCGCTATAGCCCAGCTA 61.119 55.000 19.00 12.92 45.55 3.32
7602 12843 1.983119 TTTGCCGCTATAGCCCAGCT 61.983 55.000 19.00 0.00 43.41 4.24
7603 12844 0.890996 ATTTGCCGCTATAGCCCAGC 60.891 55.000 19.00 18.27 37.91 4.85
7604 12845 1.267806 CAATTTGCCGCTATAGCCCAG 59.732 52.381 19.00 9.17 37.91 4.45
7605 12846 1.317613 CAATTTGCCGCTATAGCCCA 58.682 50.000 19.00 13.13 37.91 5.36
7606 12847 1.318576 ACAATTTGCCGCTATAGCCC 58.681 50.000 19.00 10.69 37.91 5.19
7607 12848 2.875933 TGTACAATTTGCCGCTATAGCC 59.124 45.455 19.00 6.59 37.91 3.93
7608 12849 4.213270 TCATGTACAATTTGCCGCTATAGC 59.787 41.667 15.09 15.09 37.78 2.97
7609 12850 5.922739 TCATGTACAATTTGCCGCTATAG 57.077 39.130 0.00 0.00 0.00 1.31
7610 12851 6.685527 TTTCATGTACAATTTGCCGCTATA 57.314 33.333 0.00 0.00 0.00 1.31
7611 12852 5.574891 TTTCATGTACAATTTGCCGCTAT 57.425 34.783 0.00 0.00 0.00 2.97
7612 12853 5.124617 TGATTTCATGTACAATTTGCCGCTA 59.875 36.000 0.00 0.00 0.00 4.26
7613 12854 3.932545 TTTCATGTACAATTTGCCGCT 57.067 38.095 0.00 0.00 0.00 5.52
7614 12855 4.172505 TGATTTCATGTACAATTTGCCGC 58.827 39.130 0.00 0.00 0.00 6.53
7615 12856 6.890663 AATGATTTCATGTACAATTTGCCG 57.109 33.333 0.00 0.00 36.56 5.69
7619 12860 9.248291 GCCGATAAATGATTTCATGTACAATTT 57.752 29.630 0.00 2.18 36.56 1.82
7620 12861 8.412456 TGCCGATAAATGATTTCATGTACAATT 58.588 29.630 0.00 0.00 36.56 2.32
7621 12862 7.939782 TGCCGATAAATGATTTCATGTACAAT 58.060 30.769 0.00 0.00 36.56 2.71
7622 12863 7.326968 TGCCGATAAATGATTTCATGTACAA 57.673 32.000 0.00 0.00 36.56 2.41
7623 12864 6.934048 TGCCGATAAATGATTTCATGTACA 57.066 33.333 0.00 0.00 36.56 2.90
7624 12865 7.192913 TGTTGCCGATAAATGATTTCATGTAC 58.807 34.615 0.00 0.00 36.56 2.90
7625 12866 7.326968 TGTTGCCGATAAATGATTTCATGTA 57.673 32.000 0.00 0.00 36.56 2.29
7626 12867 6.206395 TGTTGCCGATAAATGATTTCATGT 57.794 33.333 0.00 0.00 36.56 3.21
7627 12868 6.346279 GCATGTTGCCGATAAATGATTTCATG 60.346 38.462 0.00 1.09 37.42 3.07
7628 12869 5.693104 GCATGTTGCCGATAAATGATTTCAT 59.307 36.000 0.00 0.00 37.42 2.57
7629 12870 5.042593 GCATGTTGCCGATAAATGATTTCA 58.957 37.500 0.00 0.00 37.42 2.69
7630 12871 5.284079 AGCATGTTGCCGATAAATGATTTC 58.716 37.500 0.00 0.00 46.52 2.17
7631 12872 5.163530 TGAGCATGTTGCCGATAAATGATTT 60.164 36.000 0.00 0.00 46.52 2.17
7632 12873 4.338964 TGAGCATGTTGCCGATAAATGATT 59.661 37.500 0.00 0.00 46.52 2.57
7633 12874 3.884693 TGAGCATGTTGCCGATAAATGAT 59.115 39.130 0.00 0.00 46.52 2.45
7634 12875 3.277715 TGAGCATGTTGCCGATAAATGA 58.722 40.909 0.00 0.00 46.52 2.57
7635 12876 3.696281 TGAGCATGTTGCCGATAAATG 57.304 42.857 0.00 0.00 46.52 2.32
7636 12877 4.082300 TGTTTGAGCATGTTGCCGATAAAT 60.082 37.500 0.00 0.00 46.52 1.40
7637 12878 3.254411 TGTTTGAGCATGTTGCCGATAAA 59.746 39.130 0.00 0.00 46.52 1.40
7638 12879 2.816672 TGTTTGAGCATGTTGCCGATAA 59.183 40.909 0.00 0.00 46.52 1.75
7639 12880 2.431454 TGTTTGAGCATGTTGCCGATA 58.569 42.857 0.00 0.00 46.52 2.92
7640 12881 1.246649 TGTTTGAGCATGTTGCCGAT 58.753 45.000 0.00 0.00 46.52 4.18
7641 12882 1.028130 TTGTTTGAGCATGTTGCCGA 58.972 45.000 0.00 0.00 46.52 5.54
7642 12883 1.130955 GTTGTTTGAGCATGTTGCCG 58.869 50.000 0.00 0.00 46.52 5.69
7643 12884 2.514205 AGTTGTTTGAGCATGTTGCC 57.486 45.000 0.00 0.00 46.52 4.52
7644 12885 4.795278 GCTATAGTTGTTTGAGCATGTTGC 59.205 41.667 0.84 0.00 45.46 4.17
7645 12886 5.023920 CGCTATAGTTGTTTGAGCATGTTG 58.976 41.667 0.84 0.00 32.55 3.33
7646 12887 4.094887 CCGCTATAGTTGTTTGAGCATGTT 59.905 41.667 0.84 0.00 32.55 2.71
7647 12888 3.623060 CCGCTATAGTTGTTTGAGCATGT 59.377 43.478 0.84 0.00 32.55 3.21
7648 12889 3.002656 CCCGCTATAGTTGTTTGAGCATG 59.997 47.826 0.84 0.00 32.55 4.06
7649 12890 3.206150 CCCGCTATAGTTGTTTGAGCAT 58.794 45.455 0.84 0.00 32.55 3.79
7650 12891 2.627945 CCCGCTATAGTTGTTTGAGCA 58.372 47.619 0.84 0.00 32.55 4.26
7651 12892 1.940613 CCCCGCTATAGTTGTTTGAGC 59.059 52.381 0.84 0.00 0.00 4.26
7652 12893 1.940613 GCCCCGCTATAGTTGTTTGAG 59.059 52.381 0.84 0.00 0.00 3.02
7653 12894 1.557832 AGCCCCGCTATAGTTGTTTGA 59.442 47.619 0.84 0.00 36.99 2.69
7654 12895 2.038387 AGCCCCGCTATAGTTGTTTG 57.962 50.000 0.84 0.00 36.99 2.93
7671 12912 9.635520 TCATAGTTTTAAATAGTCGGCTATAGC 57.364 33.333 16.78 16.78 36.95 2.97
7693 12934 8.768955 GCCAAACAACAACAACAAATAATCATA 58.231 29.630 0.00 0.00 0.00 2.15
7694 12935 7.518052 CGCCAAACAACAACAACAAATAATCAT 60.518 33.333 0.00 0.00 0.00 2.45
7695 12936 6.237942 CGCCAAACAACAACAACAAATAATCA 60.238 34.615 0.00 0.00 0.00 2.57
7696 12937 6.126079 CGCCAAACAACAACAACAAATAATC 58.874 36.000 0.00 0.00 0.00 1.75
7697 12938 5.007136 CCGCCAAACAACAACAACAAATAAT 59.993 36.000 0.00 0.00 0.00 1.28
7698 12939 4.330074 CCGCCAAACAACAACAACAAATAA 59.670 37.500 0.00 0.00 0.00 1.40
7699 12940 3.865745 CCGCCAAACAACAACAACAAATA 59.134 39.130 0.00 0.00 0.00 1.40
7700 12941 2.675348 CCGCCAAACAACAACAACAAAT 59.325 40.909 0.00 0.00 0.00 2.32
7701 12942 2.069273 CCGCCAAACAACAACAACAAA 58.931 42.857 0.00 0.00 0.00 2.83
7702 12943 1.272490 TCCGCCAAACAACAACAACAA 59.728 42.857 0.00 0.00 0.00 2.83
7703 12944 0.888619 TCCGCCAAACAACAACAACA 59.111 45.000 0.00 0.00 0.00 3.33
7704 12945 1.923864 CTTCCGCCAAACAACAACAAC 59.076 47.619 0.00 0.00 0.00 3.32
7705 12946 1.134965 CCTTCCGCCAAACAACAACAA 60.135 47.619 0.00 0.00 0.00 2.83
7706 12947 0.457851 CCTTCCGCCAAACAACAACA 59.542 50.000 0.00 0.00 0.00 3.33
7707 12948 0.458260 ACCTTCCGCCAAACAACAAC 59.542 50.000 0.00 0.00 0.00 3.32
7708 12949 0.457851 CACCTTCCGCCAAACAACAA 59.542 50.000 0.00 0.00 0.00 2.83
7709 12950 0.394488 TCACCTTCCGCCAAACAACA 60.394 50.000 0.00 0.00 0.00 3.33
7710 12951 0.958822 ATCACCTTCCGCCAAACAAC 59.041 50.000 0.00 0.00 0.00 3.32
7711 12952 1.698506 AATCACCTTCCGCCAAACAA 58.301 45.000 0.00 0.00 0.00 2.83
7712 12953 2.432444 CTAATCACCTTCCGCCAAACA 58.568 47.619 0.00 0.00 0.00 2.83
7713 12954 1.132453 GCTAATCACCTTCCGCCAAAC 59.868 52.381 0.00 0.00 0.00 2.93
7714 12955 1.271652 TGCTAATCACCTTCCGCCAAA 60.272 47.619 0.00 0.00 0.00 3.28
7715 12956 0.326595 TGCTAATCACCTTCCGCCAA 59.673 50.000 0.00 0.00 0.00 4.52
7716 12957 0.546122 ATGCTAATCACCTTCCGCCA 59.454 50.000 0.00 0.00 0.00 5.69
7717 12958 0.947244 CATGCTAATCACCTTCCGCC 59.053 55.000 0.00 0.00 0.00 6.13
7718 12959 0.308993 GCATGCTAATCACCTTCCGC 59.691 55.000 11.37 0.00 0.00 5.54
7719 12960 1.959042 AGCATGCTAATCACCTTCCG 58.041 50.000 21.21 0.00 0.00 4.30
7720 12961 2.360165 CCAAGCATGCTAATCACCTTCC 59.640 50.000 23.00 0.00 0.00 3.46
7721 12962 2.223665 GCCAAGCATGCTAATCACCTTC 60.224 50.000 23.00 0.00 0.00 3.46
7722 12963 1.753073 GCCAAGCATGCTAATCACCTT 59.247 47.619 23.00 0.00 0.00 3.50
7723 12964 1.396653 GCCAAGCATGCTAATCACCT 58.603 50.000 23.00 0.00 0.00 4.00
7724 12965 0.029834 CGCCAAGCATGCTAATCACC 59.970 55.000 23.00 5.69 0.00 4.02
7725 12966 0.734889 ACGCCAAGCATGCTAATCAC 59.265 50.000 23.00 8.27 0.00 3.06
7726 12967 1.401552 GAACGCCAAGCATGCTAATCA 59.598 47.619 23.00 0.00 0.00 2.57
7727 12968 1.595489 CGAACGCCAAGCATGCTAATC 60.595 52.381 23.00 11.51 0.00 1.75
7728 12969 0.378257 CGAACGCCAAGCATGCTAAT 59.622 50.000 23.00 2.60 0.00 1.73
7729 12970 1.643868 CCGAACGCCAAGCATGCTAA 61.644 55.000 23.00 0.00 0.00 3.09
7730 12971 2.106074 CCGAACGCCAAGCATGCTA 61.106 57.895 23.00 0.00 0.00 3.49
7731 12972 3.434319 CCGAACGCCAAGCATGCT 61.434 61.111 16.30 16.30 0.00 3.79
7732 12973 4.481112 CCCGAACGCCAAGCATGC 62.481 66.667 10.51 10.51 0.00 4.06
7733 12974 4.481112 GCCCGAACGCCAAGCATG 62.481 66.667 0.00 0.00 0.00 4.06
7736 12977 4.481112 CATGCCCGAACGCCAAGC 62.481 66.667 0.00 0.00 0.00 4.01
7737 12978 2.141122 AAACATGCCCGAACGCCAAG 62.141 55.000 0.00 0.00 0.00 3.61
7738 12979 0.889638 TAAACATGCCCGAACGCCAA 60.890 50.000 0.00 0.00 0.00 4.52
7739 12980 1.302383 CTAAACATGCCCGAACGCCA 61.302 55.000 0.00 0.00 0.00 5.69
7740 12981 1.427819 CTAAACATGCCCGAACGCC 59.572 57.895 0.00 0.00 0.00 5.68
7741 12982 1.226295 GCTAAACATGCCCGAACGC 60.226 57.895 0.00 0.00 0.00 4.84
7742 12983 0.732571 ATGCTAAACATGCCCGAACG 59.267 50.000 0.00 0.00 37.70 3.95
7751 12992 3.932545 TTCGCCAAACATGCTAAACAT 57.067 38.095 0.00 0.00 40.66 2.71
7752 12993 3.637432 CTTTCGCCAAACATGCTAAACA 58.363 40.909 0.00 0.00 0.00 2.83
7753 12994 2.408368 GCTTTCGCCAAACATGCTAAAC 59.592 45.455 0.00 0.00 0.00 2.01
7754 12995 2.671596 GCTTTCGCCAAACATGCTAAA 58.328 42.857 0.00 0.00 0.00 1.85
7755 12996 2.346099 GCTTTCGCCAAACATGCTAA 57.654 45.000 0.00 0.00 0.00 3.09
7757 12998 4.972591 GCTTTCGCCAAACATGCT 57.027 50.000 0.00 0.00 0.00 3.79
7767 13008 1.324736 CACGAGATTAGTGGCTTTCGC 59.675 52.381 0.00 0.00 36.06 4.70
7768 13009 1.324736 GCACGAGATTAGTGGCTTTCG 59.675 52.381 0.00 0.00 39.80 3.46
7769 13010 2.622436 AGCACGAGATTAGTGGCTTTC 58.378 47.619 0.00 0.00 39.80 2.62
7770 13011 2.770164 AGCACGAGATTAGTGGCTTT 57.230 45.000 0.00 0.00 39.80 3.51
7771 13012 2.028112 TGAAGCACGAGATTAGTGGCTT 60.028 45.455 0.00 0.00 39.80 4.35
7772 13013 1.550524 TGAAGCACGAGATTAGTGGCT 59.449 47.619 0.00 0.00 39.80 4.75
7773 13014 2.010145 TGAAGCACGAGATTAGTGGC 57.990 50.000 0.00 0.00 39.80 5.01
7774 13015 2.286294 GCATGAAGCACGAGATTAGTGG 59.714 50.000 0.00 0.00 44.79 4.00
7775 13016 3.582444 GCATGAAGCACGAGATTAGTG 57.418 47.619 0.00 0.00 44.79 2.74
7787 13028 3.029320 TCAACCAAACATGCATGAAGC 57.971 42.857 32.75 0.00 45.96 3.86
7788 13029 3.430895 GCTTCAACCAAACATGCATGAAG 59.569 43.478 32.75 22.66 44.00 3.02
7789 13030 3.391965 GCTTCAACCAAACATGCATGAA 58.608 40.909 32.75 13.78 0.00 2.57
7790 13031 2.288948 GGCTTCAACCAAACATGCATGA 60.289 45.455 32.75 5.93 0.00 3.07
7791 13032 2.070783 GGCTTCAACCAAACATGCATG 58.929 47.619 25.09 25.09 0.00 4.06
7792 13033 1.693062 TGGCTTCAACCAAACATGCAT 59.307 42.857 0.00 0.00 36.55 3.96
7793 13034 1.117994 TGGCTTCAACCAAACATGCA 58.882 45.000 0.00 0.00 36.55 3.96
7794 13035 1.069049 AGTGGCTTCAACCAAACATGC 59.931 47.619 0.00 0.00 42.70 4.06
7795 13036 4.298332 GTTAGTGGCTTCAACCAAACATG 58.702 43.478 0.00 0.00 42.70 3.21
7796 13037 3.320826 GGTTAGTGGCTTCAACCAAACAT 59.679 43.478 9.02 0.00 42.70 2.71
7797 13038 2.691011 GGTTAGTGGCTTCAACCAAACA 59.309 45.455 9.02 0.00 42.70 2.83
7798 13039 2.691011 TGGTTAGTGGCTTCAACCAAAC 59.309 45.455 12.79 0.00 46.58 2.93
7799 13040 3.019799 TGGTTAGTGGCTTCAACCAAA 57.980 42.857 12.79 0.00 46.58 3.28
7800 13041 2.738587 TGGTTAGTGGCTTCAACCAA 57.261 45.000 12.79 1.04 46.58 3.67
7802 13043 1.611977 GGTTGGTTAGTGGCTTCAACC 59.388 52.381 7.62 7.62 46.65 3.77
7803 13044 2.583143 AGGTTGGTTAGTGGCTTCAAC 58.417 47.619 0.00 0.00 37.54 3.18
7804 13045 2.955660 CAAGGTTGGTTAGTGGCTTCAA 59.044 45.455 0.00 0.00 0.00 2.69
7805 13046 2.173782 TCAAGGTTGGTTAGTGGCTTCA 59.826 45.455 0.00 0.00 0.00 3.02
7806 13047 2.552743 GTCAAGGTTGGTTAGTGGCTTC 59.447 50.000 0.00 0.00 0.00 3.86
7807 13048 2.174854 AGTCAAGGTTGGTTAGTGGCTT 59.825 45.455 0.00 0.00 0.00 4.35
7808 13049 1.774856 AGTCAAGGTTGGTTAGTGGCT 59.225 47.619 0.00 0.00 0.00 4.75
7809 13050 2.271944 AGTCAAGGTTGGTTAGTGGC 57.728 50.000 0.00 0.00 0.00 5.01
7810 13051 2.293399 GCAAGTCAAGGTTGGTTAGTGG 59.707 50.000 0.00 0.00 0.00 4.00
7811 13052 3.214328 AGCAAGTCAAGGTTGGTTAGTG 58.786 45.455 0.00 0.00 31.65 2.74
7812 13053 3.577805 AGCAAGTCAAGGTTGGTTAGT 57.422 42.857 0.00 0.00 31.65 2.24
7813 13054 3.882888 TGAAGCAAGTCAAGGTTGGTTAG 59.117 43.478 0.60 0.00 43.73 2.34
7814 13055 3.630312 GTGAAGCAAGTCAAGGTTGGTTA 59.370 43.478 0.60 0.00 43.73 2.85
7815 13056 2.427095 GTGAAGCAAGTCAAGGTTGGTT 59.573 45.455 0.18 0.18 45.74 3.67
7816 13057 2.024414 GTGAAGCAAGTCAAGGTTGGT 58.976 47.619 0.00 0.00 37.22 3.67
7817 13058 2.023673 TGTGAAGCAAGTCAAGGTTGG 58.976 47.619 0.00 0.00 0.00 3.77
7818 13059 3.551454 CCATGTGAAGCAAGTCAAGGTTG 60.551 47.826 0.00 0.00 0.00 3.77
7819 13060 2.624838 CCATGTGAAGCAAGTCAAGGTT 59.375 45.455 0.00 0.00 0.00 3.50
7820 13061 2.233271 CCATGTGAAGCAAGTCAAGGT 58.767 47.619 0.00 0.00 0.00 3.50
7821 13062 2.233271 ACCATGTGAAGCAAGTCAAGG 58.767 47.619 0.00 0.00 0.00 3.61
7822 13063 3.120060 GCTACCATGTGAAGCAAGTCAAG 60.120 47.826 6.36 0.00 36.26 3.02
7823 13064 2.813754 GCTACCATGTGAAGCAAGTCAA 59.186 45.455 6.36 0.00 36.26 3.18
7824 13065 2.224499 TGCTACCATGTGAAGCAAGTCA 60.224 45.455 10.44 0.00 42.96 3.41
7825 13066 2.426522 TGCTACCATGTGAAGCAAGTC 58.573 47.619 10.44 0.00 42.96 3.01
7826 13067 2.566833 TGCTACCATGTGAAGCAAGT 57.433 45.000 10.44 0.00 42.96 3.16
7875 13116 9.191995 CGAAGAATTGTTTAGGTAATGCTTTTT 57.808 29.630 0.00 0.00 33.37 1.94
7876 13117 8.573035 TCGAAGAATTGTTTAGGTAATGCTTTT 58.427 29.630 0.00 0.00 33.37 2.27
7877 13118 8.106247 TCGAAGAATTGTTTAGGTAATGCTTT 57.894 30.769 0.00 0.00 33.37 3.51
7878 13119 7.681939 TCGAAGAATTGTTTAGGTAATGCTT 57.318 32.000 0.00 0.00 35.39 3.91
7879 13120 7.681939 TTCGAAGAATTGTTTAGGTAATGCT 57.318 32.000 0.00 0.00 45.90 3.79
7880 13121 8.798153 CAATTCGAAGAATTGTTTAGGTAATGC 58.202 33.333 21.00 0.00 45.90 3.56
7883 13124 9.280174 AGTCAATTCGAAGAATTGTTTAGGTAA 57.720 29.630 25.39 9.17 45.90 2.85
7884 13125 8.842358 AGTCAATTCGAAGAATTGTTTAGGTA 57.158 30.769 25.39 9.72 45.90 3.08
7885 13126 7.745620 AGTCAATTCGAAGAATTGTTTAGGT 57.254 32.000 25.39 9.88 45.90 3.08
7886 13127 8.289618 TCAAGTCAATTCGAAGAATTGTTTAGG 58.710 33.333 25.39 16.35 45.90 2.69
7887 13128 9.663904 TTCAAGTCAATTCGAAGAATTGTTTAG 57.336 29.630 25.39 17.50 45.90 1.85
7888 13129 9.445786 GTTCAAGTCAATTCGAAGAATTGTTTA 57.554 29.630 25.39 11.35 45.90 2.01
7889 13130 7.435192 GGTTCAAGTCAATTCGAAGAATTGTTT 59.565 33.333 25.39 19.84 45.90 2.83
7890 13131 6.918022 GGTTCAAGTCAATTCGAAGAATTGTT 59.082 34.615 25.39 15.77 45.90 2.83
7891 13132 6.039270 TGGTTCAAGTCAATTCGAAGAATTGT 59.961 34.615 25.39 11.90 45.90 2.71
7892 13133 6.437928 TGGTTCAAGTCAATTCGAAGAATTG 58.562 36.000 22.47 22.47 45.90 2.32
7893 13134 6.633500 TGGTTCAAGTCAATTCGAAGAATT 57.367 33.333 3.35 0.00 45.90 2.17
7894 13135 6.633500 TTGGTTCAAGTCAATTCGAAGAAT 57.367 33.333 3.35 0.00 45.90 2.40
7895 13136 6.443934 TTTGGTTCAAGTCAATTCGAAGAA 57.556 33.333 3.35 0.00 45.90 2.52
7896 13137 6.633500 ATTTGGTTCAAGTCAATTCGAAGA 57.367 33.333 3.35 0.00 0.00 2.87
7897 13138 8.970691 ATTATTTGGTTCAAGTCAATTCGAAG 57.029 30.769 3.35 0.00 0.00 3.79
7898 13139 9.757227 AAATTATTTGGTTCAAGTCAATTCGAA 57.243 25.926 0.00 0.00 0.00 3.71
7899 13140 9.190858 CAAATTATTTGGTTCAAGTCAATTCGA 57.809 29.630 9.63 0.00 37.01 3.71
7915 13156 9.835389 ACATCCATACAAATCCCAAATTATTTG 57.165 29.630 10.46 10.46 44.78 2.32
7916 13157 9.835389 CACATCCATACAAATCCCAAATTATTT 57.165 29.630 0.00 0.00 0.00 1.40
7917 13158 7.933033 GCACATCCATACAAATCCCAAATTATT 59.067 33.333 0.00 0.00 0.00 1.40
7918 13159 7.290714 AGCACATCCATACAAATCCCAAATTAT 59.709 33.333 0.00 0.00 0.00 1.28
7919 13160 6.610830 AGCACATCCATACAAATCCCAAATTA 59.389 34.615 0.00 0.00 0.00 1.40
7920 13161 5.426185 AGCACATCCATACAAATCCCAAATT 59.574 36.000 0.00 0.00 0.00 1.82
7921 13162 4.964262 AGCACATCCATACAAATCCCAAAT 59.036 37.500 0.00 0.00 0.00 2.32
7922 13163 4.352009 AGCACATCCATACAAATCCCAAA 58.648 39.130 0.00 0.00 0.00 3.28
7923 13164 3.979911 AGCACATCCATACAAATCCCAA 58.020 40.909 0.00 0.00 0.00 4.12
7924 13165 3.668141 AGCACATCCATACAAATCCCA 57.332 42.857 0.00 0.00 0.00 4.37
7925 13166 3.503748 GCTAGCACATCCATACAAATCCC 59.496 47.826 10.63 0.00 0.00 3.85
7926 13167 4.136796 TGCTAGCACATCCATACAAATCC 58.863 43.478 14.93 0.00 0.00 3.01
7927 13168 4.818546 ACTGCTAGCACATCCATACAAATC 59.181 41.667 14.93 0.00 0.00 2.17
7928 13169 4.785301 ACTGCTAGCACATCCATACAAAT 58.215 39.130 14.93 0.00 0.00 2.32
7929 13170 4.220693 ACTGCTAGCACATCCATACAAA 57.779 40.909 14.93 0.00 0.00 2.83
7930 13171 3.912496 ACTGCTAGCACATCCATACAA 57.088 42.857 14.93 0.00 0.00 2.41
7931 13172 3.912496 AACTGCTAGCACATCCATACA 57.088 42.857 14.93 0.00 0.00 2.29
7932 13173 4.191544 TCAAACTGCTAGCACATCCATAC 58.808 43.478 14.93 0.00 0.00 2.39
7933 13174 4.486125 TCAAACTGCTAGCACATCCATA 57.514 40.909 14.93 0.00 0.00 2.74
7934 13175 3.354948 TCAAACTGCTAGCACATCCAT 57.645 42.857 14.93 0.00 0.00 3.41
7935 13176 2.857186 TCAAACTGCTAGCACATCCA 57.143 45.000 14.93 0.00 0.00 3.41
7936 13177 3.077359 ACTTCAAACTGCTAGCACATCC 58.923 45.455 14.93 0.00 0.00 3.51
7937 13178 4.756084 AACTTCAAACTGCTAGCACATC 57.244 40.909 14.93 0.00 0.00 3.06
7938 13179 4.580167 TCAAACTTCAAACTGCTAGCACAT 59.420 37.500 14.93 1.47 0.00 3.21
7939 13180 3.944650 TCAAACTTCAAACTGCTAGCACA 59.055 39.130 14.93 0.00 0.00 4.57
7940 13181 4.531332 CTCAAACTTCAAACTGCTAGCAC 58.469 43.478 14.93 0.00 0.00 4.40
7941 13182 3.003689 GCTCAAACTTCAAACTGCTAGCA 59.996 43.478 18.22 18.22 0.00 3.49
7942 13183 3.559504 GCTCAAACTTCAAACTGCTAGC 58.440 45.455 8.10 8.10 0.00 3.42
7943 13184 3.057946 GGGCTCAAACTTCAAACTGCTAG 60.058 47.826 0.00 0.00 0.00 3.42
7944 13185 2.884639 GGGCTCAAACTTCAAACTGCTA 59.115 45.455 0.00 0.00 0.00 3.49
7945 13186 1.683385 GGGCTCAAACTTCAAACTGCT 59.317 47.619 0.00 0.00 0.00 4.24
7946 13187 1.408702 TGGGCTCAAACTTCAAACTGC 59.591 47.619 0.00 0.00 0.00 4.40
7947 13188 3.799281 TTGGGCTCAAACTTCAAACTG 57.201 42.857 0.00 0.00 0.00 3.16
7948 13189 3.132824 CCTTTGGGCTCAAACTTCAAACT 59.867 43.478 7.92 0.00 37.89 2.66
7949 13190 3.118775 ACCTTTGGGCTCAAACTTCAAAC 60.119 43.478 7.92 0.00 37.89 2.93
7950 13191 3.103742 ACCTTTGGGCTCAAACTTCAAA 58.896 40.909 7.92 0.00 37.89 2.69
7951 13192 2.745968 ACCTTTGGGCTCAAACTTCAA 58.254 42.857 7.92 0.00 37.89 2.69
7952 13193 2.452600 ACCTTTGGGCTCAAACTTCA 57.547 45.000 7.92 0.00 37.89 3.02
7953 13194 3.255888 CCTTACCTTTGGGCTCAAACTTC 59.744 47.826 7.92 0.00 37.89 3.01
7954 13195 3.230976 CCTTACCTTTGGGCTCAAACTT 58.769 45.455 7.92 0.00 37.89 2.66
7955 13196 2.490902 CCCTTACCTTTGGGCTCAAACT 60.491 50.000 7.92 0.00 37.89 2.66
7956 13197 1.893137 CCCTTACCTTTGGGCTCAAAC 59.107 52.381 7.92 0.00 37.89 2.93
7957 13198 1.783979 TCCCTTACCTTTGGGCTCAAA 59.216 47.619 12.09 12.09 43.04 2.69
7958 13199 1.074889 GTCCCTTACCTTTGGGCTCAA 59.925 52.381 0.00 0.00 43.04 3.02
7959 13200 0.696501 GTCCCTTACCTTTGGGCTCA 59.303 55.000 0.00 0.00 43.04 4.26
7960 13201 0.696501 TGTCCCTTACCTTTGGGCTC 59.303 55.000 0.00 0.00 43.04 4.70
7961 13202 0.698818 CTGTCCCTTACCTTTGGGCT 59.301 55.000 0.00 0.00 43.04 5.19
7962 13203 0.323451 CCTGTCCCTTACCTTTGGGC 60.323 60.000 0.00 0.00 43.04 5.36
7963 13204 0.323451 GCCTGTCCCTTACCTTTGGG 60.323 60.000 0.00 0.00 44.66 4.12
7964 13205 0.404040 TGCCTGTCCCTTACCTTTGG 59.596 55.000 0.00 0.00 0.00 3.28
7965 13206 2.286365 TTGCCTGTCCCTTACCTTTG 57.714 50.000 0.00 0.00 0.00 2.77
7966 13207 3.322191 TTTTGCCTGTCCCTTACCTTT 57.678 42.857 0.00 0.00 0.00 3.11
7967 13208 3.322191 TTTTTGCCTGTCCCTTACCTT 57.678 42.857 0.00 0.00 0.00 3.50
7986 13227 2.845363 CAGCCATTTCCTGCCTTTTT 57.155 45.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.