Multiple sequence alignment - TraesCS6D01G109000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G109000 chr6D 100.000 3356 0 0 1 3356 73586994 73590349 0.000000e+00 6198.0
1 TraesCS6D01G109000 chr6D 86.471 1774 185 25 631 2369 379721077 379722830 0.000000e+00 1895.0
2 TraesCS6D01G109000 chr6D 84.760 853 109 11 997 1828 65390042 65389190 0.000000e+00 835.0
3 TraesCS6D01G109000 chr6D 83.160 576 81 13 1908 2476 65389182 65388616 2.310000e-141 512.0
4 TraesCS6D01G109000 chr6D 97.561 41 1 0 2790 2830 73589739 73589779 1.670000e-08 71.3
5 TraesCS6D01G109000 chr6D 97.561 41 1 0 2746 2786 73589783 73589823 1.670000e-08 71.3
6 TraesCS6D01G109000 chr6D 87.302 63 2 4 2730 2789 389427607 389427666 2.160000e-07 67.6
7 TraesCS6D01G109000 chr6D 95.238 42 1 1 2797 2837 389427629 389427670 7.770000e-07 65.8
8 TraesCS6D01G109000 chr6A 94.870 2261 87 20 271 2520 90031970 90034212 0.000000e+00 3506.0
9 TraesCS6D01G109000 chr6A 86.471 1774 184 25 631 2369 520872831 520871079 0.000000e+00 1895.0
10 TraesCS6D01G109000 chr6A 90.308 227 6 4 2453 2676 90034207 90034420 1.970000e-72 283.0
11 TraesCS6D01G109000 chr6B 93.488 2150 96 11 554 2693 147961042 147963157 0.000000e+00 3155.0
12 TraesCS6D01G109000 chr6B 86.584 1774 177 30 631 2369 566538293 566536546 0.000000e+00 1901.0
13 TraesCS6D01G109000 chr6B 85.731 841 98 11 997 1820 140451421 140450586 0.000000e+00 869.0
14 TraesCS6D01G109000 chr6B 83.216 566 82 12 1907 2466 140433974 140433416 1.070000e-139 507.0
15 TraesCS6D01G109000 chr6B 83.039 566 83 12 1907 2466 140450565 140450007 5.000000e-138 501.0
16 TraesCS6D01G109000 chr6B 82.862 566 84 12 1907 2466 140412817 140412259 2.330000e-136 496.0
17 TraesCS6D01G109000 chr6B 82.415 381 48 9 1456 1820 140423851 140423474 6.990000e-82 315.0
18 TraesCS6D01G109000 chr6B 82.152 381 48 11 1456 1820 140413214 140412838 3.250000e-80 309.0
19 TraesCS6D01G109000 chr6B 83.794 253 20 12 262 513 147960810 147961042 1.570000e-53 220.0
20 TraesCS6D01G109000 chr6B 87.222 180 23 0 3175 3354 147963575 147963754 4.390000e-49 206.0
21 TraesCS6D01G109000 chr6B 88.667 150 16 1 3123 3272 148314226 148314374 7.400000e-42 182.0
22 TraesCS6D01G109000 chr7A 92.442 172 12 1 709 879 310667508 310667679 9.300000e-61 244.0
23 TraesCS6D01G109000 chr7A 89.820 167 17 0 713 879 509847773 509847939 7.290000e-52 215.0
24 TraesCS6D01G109000 chr7A 83.333 72 10 2 2719 2789 188844229 188844159 7.770000e-07 65.8
25 TraesCS6D01G109000 chr7A 97.222 36 1 0 2802 2837 188844190 188844155 1.010000e-05 62.1
26 TraesCS6D01G109000 chr7B 88.372 172 19 1 709 879 334444344 334444173 4.390000e-49 206.0
27 TraesCS6D01G109000 chr7B 84.404 109 15 1 996 1104 33935872 33935766 4.580000e-19 106.0
28 TraesCS6D01G109000 chr2D 86.014 143 19 1 3134 3275 61969975 61970117 5.800000e-33 152.0
29 TraesCS6D01G109000 chr2D 94.444 36 2 0 2755 2790 387734169 387734134 4.680000e-04 56.5
30 TraesCS6D01G109000 chr2D 100.000 30 0 0 2799 2828 387734169 387734140 4.680000e-04 56.5
31 TraesCS6D01G109000 chr5D 87.156 109 14 0 1004 1112 363231567 363231675 1.260000e-24 124.0
32 TraesCS6D01G109000 chr4A 100.000 30 0 0 2755 2784 153780345 153780374 4.680000e-04 56.5
33 TraesCS6D01G109000 chr4A 100.000 30 0 0 2799 2828 153780345 153780374 4.680000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G109000 chr6D 73586994 73590349 3355 False 2113.533333 6198 98.374 1 3356 3 chr6D.!!$F2 3355
1 TraesCS6D01G109000 chr6D 379721077 379722830 1753 False 1895.000000 1895 86.471 631 2369 1 chr6D.!!$F1 1738
2 TraesCS6D01G109000 chr6D 65388616 65390042 1426 True 673.500000 835 83.960 997 2476 2 chr6D.!!$R1 1479
3 TraesCS6D01G109000 chr6A 520871079 520872831 1752 True 1895.000000 1895 86.471 631 2369 1 chr6A.!!$R1 1738
4 TraesCS6D01G109000 chr6A 90031970 90034420 2450 False 1894.500000 3506 92.589 271 2676 2 chr6A.!!$F1 2405
5 TraesCS6D01G109000 chr6B 566536546 566538293 1747 True 1901.000000 1901 86.584 631 2369 1 chr6B.!!$R3 1738
6 TraesCS6D01G109000 chr6B 147960810 147963754 2944 False 1193.666667 3155 88.168 262 3354 3 chr6B.!!$F2 3092
7 TraesCS6D01G109000 chr6B 140450007 140451421 1414 True 685.000000 869 84.385 997 2466 2 chr6B.!!$R5 1469
8 TraesCS6D01G109000 chr6B 140433416 140433974 558 True 507.000000 507 83.216 1907 2466 1 chr6B.!!$R2 559
9 TraesCS6D01G109000 chr6B 140412259 140413214 955 True 402.500000 496 82.507 1456 2466 2 chr6B.!!$R4 1010

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
527 528 0.032403 TGCTGCTGATTTGGTTGTGC 59.968 50.0 0.0 0.0 0.00 4.57 F
1587 1607 0.179161 CGTCCAAGGAGAGTACTGCG 60.179 60.0 0.0 0.0 39.46 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 1784 1.277842 TGTTCCTCCATGCGCTTTCTA 59.722 47.619 9.73 0.0 0.00 2.10 R
2640 2770 0.038526 ACGACAATGACGGACACCTC 60.039 55.000 10.02 0.0 34.93 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.482627 CTTGTCTGTTATATGGTCTAGATTTCC 57.517 37.037 0.00 0.00 0.00 3.13
29 30 7.963532 TGTCTGTTATATGGTCTAGATTTCCC 58.036 38.462 0.00 0.00 0.00 3.97
30 31 7.789831 TGTCTGTTATATGGTCTAGATTTCCCT 59.210 37.037 0.00 0.00 0.00 4.20
31 32 8.652290 GTCTGTTATATGGTCTAGATTTCCCTT 58.348 37.037 0.00 0.00 0.00 3.95
32 33 8.871125 TCTGTTATATGGTCTAGATTTCCCTTC 58.129 37.037 0.00 0.00 0.00 3.46
33 34 7.974504 TGTTATATGGTCTAGATTTCCCTTCC 58.025 38.462 0.00 0.00 0.00 3.46
34 35 7.794683 TGTTATATGGTCTAGATTTCCCTTCCT 59.205 37.037 0.00 0.00 0.00 3.36
35 36 6.943899 ATATGGTCTAGATTTCCCTTCCTC 57.056 41.667 0.00 0.00 0.00 3.71
36 37 4.074799 TGGTCTAGATTTCCCTTCCTCA 57.925 45.455 0.00 0.00 0.00 3.86
37 38 4.033709 TGGTCTAGATTTCCCTTCCTCAG 58.966 47.826 0.00 0.00 0.00 3.35
38 39 4.034410 GGTCTAGATTTCCCTTCCTCAGT 58.966 47.826 0.00 0.00 0.00 3.41
39 40 5.209659 GGTCTAGATTTCCCTTCCTCAGTA 58.790 45.833 0.00 0.00 0.00 2.74
40 41 5.841783 GGTCTAGATTTCCCTTCCTCAGTAT 59.158 44.000 0.00 0.00 0.00 2.12
41 42 6.327887 GGTCTAGATTTCCCTTCCTCAGTATT 59.672 42.308 0.00 0.00 0.00 1.89
42 43 7.147461 GGTCTAGATTTCCCTTCCTCAGTATTT 60.147 40.741 0.00 0.00 0.00 1.40
43 44 7.713073 GTCTAGATTTCCCTTCCTCAGTATTTG 59.287 40.741 0.00 0.00 0.00 2.32
44 45 6.394345 AGATTTCCCTTCCTCAGTATTTGT 57.606 37.500 0.00 0.00 0.00 2.83
45 46 6.794534 AGATTTCCCTTCCTCAGTATTTGTT 58.205 36.000 0.00 0.00 0.00 2.83
46 47 7.241628 AGATTTCCCTTCCTCAGTATTTGTTT 58.758 34.615 0.00 0.00 0.00 2.83
47 48 6.894339 TTTCCCTTCCTCAGTATTTGTTTC 57.106 37.500 0.00 0.00 0.00 2.78
48 49 4.918588 TCCCTTCCTCAGTATTTGTTTCC 58.081 43.478 0.00 0.00 0.00 3.13
49 50 4.352595 TCCCTTCCTCAGTATTTGTTTCCA 59.647 41.667 0.00 0.00 0.00 3.53
50 51 5.076873 CCCTTCCTCAGTATTTGTTTCCAA 58.923 41.667 0.00 0.00 0.00 3.53
51 52 5.716703 CCCTTCCTCAGTATTTGTTTCCAAT 59.283 40.000 0.00 0.00 0.00 3.16
52 53 6.889722 CCCTTCCTCAGTATTTGTTTCCAATA 59.110 38.462 0.00 0.00 0.00 1.90
53 54 7.561356 CCCTTCCTCAGTATTTGTTTCCAATAT 59.439 37.037 0.00 0.00 0.00 1.28
54 55 9.627123 CCTTCCTCAGTATTTGTTTCCAATATA 57.373 33.333 0.00 0.00 0.00 0.86
68 69 9.473007 TGTTTCCAATATAGTTGAATGGATTGA 57.527 29.630 0.00 0.00 39.74 2.57
69 70 9.956720 GTTTCCAATATAGTTGAATGGATTGAG 57.043 33.333 0.00 0.00 39.74 3.02
70 71 8.696043 TTCCAATATAGTTGAATGGATTGAGG 57.304 34.615 0.00 0.00 39.74 3.86
71 72 7.815383 TCCAATATAGTTGAATGGATTGAGGT 58.185 34.615 0.00 0.00 35.33 3.85
72 73 7.939039 TCCAATATAGTTGAATGGATTGAGGTC 59.061 37.037 0.00 0.00 35.33 3.85
73 74 7.095060 CCAATATAGTTGAATGGATTGAGGTCG 60.095 40.741 0.00 0.00 32.82 4.79
74 75 3.703001 AGTTGAATGGATTGAGGTCGT 57.297 42.857 0.00 0.00 0.00 4.34
75 76 4.021102 AGTTGAATGGATTGAGGTCGTT 57.979 40.909 0.00 0.00 0.00 3.85
76 77 3.753272 AGTTGAATGGATTGAGGTCGTTG 59.247 43.478 0.00 0.00 0.00 4.10
77 78 2.710377 TGAATGGATTGAGGTCGTTGG 58.290 47.619 0.00 0.00 0.00 3.77
78 79 2.017049 GAATGGATTGAGGTCGTTGGG 58.983 52.381 0.00 0.00 0.00 4.12
79 80 0.991920 ATGGATTGAGGTCGTTGGGT 59.008 50.000 0.00 0.00 0.00 4.51
80 81 0.768622 TGGATTGAGGTCGTTGGGTT 59.231 50.000 0.00 0.00 0.00 4.11
81 82 1.271163 TGGATTGAGGTCGTTGGGTTC 60.271 52.381 0.00 0.00 0.00 3.62
82 83 1.003233 GGATTGAGGTCGTTGGGTTCT 59.997 52.381 0.00 0.00 0.00 3.01
83 84 2.235402 GGATTGAGGTCGTTGGGTTCTA 59.765 50.000 0.00 0.00 0.00 2.10
84 85 2.825861 TTGAGGTCGTTGGGTTCTAC 57.174 50.000 0.00 0.00 0.00 2.59
85 86 1.707106 TGAGGTCGTTGGGTTCTACA 58.293 50.000 0.00 0.00 0.00 2.74
86 87 2.040939 TGAGGTCGTTGGGTTCTACAA 58.959 47.619 0.00 0.00 0.00 2.41
87 88 2.435069 TGAGGTCGTTGGGTTCTACAAA 59.565 45.455 0.00 0.00 0.00 2.83
88 89 3.071892 TGAGGTCGTTGGGTTCTACAAAT 59.928 43.478 0.00 0.00 0.00 2.32
89 90 4.070009 GAGGTCGTTGGGTTCTACAAATT 58.930 43.478 0.00 0.00 0.00 1.82
90 91 4.070009 AGGTCGTTGGGTTCTACAAATTC 58.930 43.478 0.00 0.00 0.00 2.17
91 92 3.816523 GGTCGTTGGGTTCTACAAATTCA 59.183 43.478 0.00 0.00 0.00 2.57
92 93 4.083484 GGTCGTTGGGTTCTACAAATTCAG 60.083 45.833 0.00 0.00 0.00 3.02
93 94 4.514066 GTCGTTGGGTTCTACAAATTCAGT 59.486 41.667 0.00 0.00 0.00 3.41
94 95 5.008316 GTCGTTGGGTTCTACAAATTCAGTT 59.992 40.000 0.00 0.00 0.00 3.16
95 96 5.591067 TCGTTGGGTTCTACAAATTCAGTTT 59.409 36.000 0.00 0.00 0.00 2.66
96 97 6.095720 TCGTTGGGTTCTACAAATTCAGTTTT 59.904 34.615 0.00 0.00 0.00 2.43
97 98 7.282675 TCGTTGGGTTCTACAAATTCAGTTTTA 59.717 33.333 0.00 0.00 0.00 1.52
98 99 8.079809 CGTTGGGTTCTACAAATTCAGTTTTAT 58.920 33.333 0.00 0.00 0.00 1.40
99 100 9.406828 GTTGGGTTCTACAAATTCAGTTTTATC 57.593 33.333 0.00 0.00 0.00 1.75
100 101 8.934023 TGGGTTCTACAAATTCAGTTTTATCT 57.066 30.769 0.00 0.00 0.00 1.98
101 102 9.362151 TGGGTTCTACAAATTCAGTTTTATCTT 57.638 29.630 0.00 0.00 0.00 2.40
113 114 8.792830 TTCAGTTTTATCTTTCTACATGGAGG 57.207 34.615 4.74 0.00 0.00 4.30
114 115 6.823689 TCAGTTTTATCTTTCTACATGGAGGC 59.176 38.462 4.74 0.00 0.00 4.70
115 116 6.599244 CAGTTTTATCTTTCTACATGGAGGCA 59.401 38.462 4.74 0.00 0.00 4.75
116 117 7.284034 CAGTTTTATCTTTCTACATGGAGGCAT 59.716 37.037 4.74 0.00 0.00 4.40
117 118 7.284034 AGTTTTATCTTTCTACATGGAGGCATG 59.716 37.037 4.74 0.00 38.46 4.06
118 119 2.923121 TCTTTCTACATGGAGGCATGC 58.077 47.619 9.90 9.90 36.08 4.06
119 120 2.239402 TCTTTCTACATGGAGGCATGCA 59.761 45.455 21.36 0.00 36.08 3.96
120 121 2.042686 TTCTACATGGAGGCATGCAC 57.957 50.000 21.36 12.64 36.08 4.57
121 122 0.911053 TCTACATGGAGGCATGCACA 59.089 50.000 21.36 15.34 36.08 4.57
122 123 1.491754 TCTACATGGAGGCATGCACAT 59.508 47.619 21.36 16.94 36.08 3.21
123 124 2.092267 TCTACATGGAGGCATGCACATT 60.092 45.455 21.36 12.58 36.08 2.71
124 125 0.821517 ACATGGAGGCATGCACATTG 59.178 50.000 21.36 14.79 36.08 2.82
125 126 0.821517 CATGGAGGCATGCACATTGT 59.178 50.000 21.36 0.00 0.00 2.71
126 127 1.206132 CATGGAGGCATGCACATTGTT 59.794 47.619 21.36 0.00 0.00 2.83
127 128 0.604073 TGGAGGCATGCACATTGTTG 59.396 50.000 21.36 0.00 0.00 3.33
128 129 0.604578 GGAGGCATGCACATTGTTGT 59.395 50.000 21.36 0.00 36.15 3.32
129 130 1.001181 GGAGGCATGCACATTGTTGTT 59.999 47.619 21.36 0.00 32.34 2.83
130 131 2.548493 GGAGGCATGCACATTGTTGTTT 60.548 45.455 21.36 0.00 32.34 2.83
131 132 3.305950 GGAGGCATGCACATTGTTGTTTA 60.306 43.478 21.36 0.00 32.34 2.01
132 133 4.305769 GAGGCATGCACATTGTTGTTTAA 58.694 39.130 21.36 0.00 32.34 1.52
133 134 4.701765 AGGCATGCACATTGTTGTTTAAA 58.298 34.783 21.36 0.00 32.34 1.52
134 135 5.121811 AGGCATGCACATTGTTGTTTAAAA 58.878 33.333 21.36 0.00 32.34 1.52
135 136 5.007528 AGGCATGCACATTGTTGTTTAAAAC 59.992 36.000 21.36 0.00 32.34 2.43
136 137 5.007528 GGCATGCACATTGTTGTTTAAAACT 59.992 36.000 21.36 0.00 32.34 2.66
137 138 6.201806 GGCATGCACATTGTTGTTTAAAACTA 59.798 34.615 21.36 0.00 32.34 2.24
138 139 7.095271 GGCATGCACATTGTTGTTTAAAACTAT 60.095 33.333 21.36 0.00 32.34 2.12
139 140 7.741216 GCATGCACATTGTTGTTTAAAACTATG 59.259 33.333 14.21 10.83 44.03 2.23
140 141 7.171447 TGCACATTGTTGTTTAAAACTATGC 57.829 32.000 11.80 7.43 42.99 3.14
141 142 6.758416 TGCACATTGTTGTTTAAAACTATGCA 59.242 30.769 11.80 0.00 42.99 3.96
142 143 7.278646 TGCACATTGTTGTTTAAAACTATGCAA 59.721 29.630 11.80 0.17 42.99 4.08
143 144 8.119226 GCACATTGTTGTTTAAAACTATGCAAA 58.881 29.630 11.80 0.00 42.99 3.68
144 145 9.419737 CACATTGTTGTTTAAAACTATGCAAAC 57.580 29.630 11.80 0.00 42.99 2.93
145 146 9.377312 ACATTGTTGTTTAAAACTATGCAAACT 57.623 25.926 11.80 0.00 42.99 2.66
149 150 9.209175 TGTTGTTTAAAACTATGCAAACTTTGT 57.791 25.926 3.48 0.00 33.16 2.83
164 165 9.518906 TGCAAACTTTGTAATTATATCTGCATG 57.481 29.630 3.48 0.00 30.52 4.06
165 166 8.482429 GCAAACTTTGTAATTATATCTGCATGC 58.518 33.333 11.82 11.82 0.00 4.06
166 167 8.971321 CAAACTTTGTAATTATATCTGCATGCC 58.029 33.333 16.68 0.00 0.00 4.40
167 168 8.469309 AACTTTGTAATTATATCTGCATGCCT 57.531 30.769 16.68 2.24 0.00 4.75
168 169 7.879070 ACTTTGTAATTATATCTGCATGCCTG 58.121 34.615 16.68 8.40 0.00 4.85
169 170 6.822667 TTGTAATTATATCTGCATGCCTGG 57.177 37.500 16.68 5.64 0.00 4.45
170 171 6.125589 TGTAATTATATCTGCATGCCTGGA 57.874 37.500 16.68 11.22 0.00 3.86
171 172 6.175471 TGTAATTATATCTGCATGCCTGGAG 58.825 40.000 16.68 5.76 41.86 3.86
175 176 3.489391 TCTGCATGCCTGGAGATTG 57.511 52.632 16.68 0.00 43.99 2.67
176 177 0.622136 TCTGCATGCCTGGAGATTGT 59.378 50.000 16.68 0.00 43.99 2.71
177 178 1.005097 TCTGCATGCCTGGAGATTGTT 59.995 47.619 16.68 0.00 43.99 2.83
178 179 1.822990 CTGCATGCCTGGAGATTGTTT 59.177 47.619 16.68 0.00 43.06 2.83
179 180 1.546923 TGCATGCCTGGAGATTGTTTG 59.453 47.619 16.68 0.00 0.00 2.93
180 181 1.547372 GCATGCCTGGAGATTGTTTGT 59.453 47.619 6.36 0.00 0.00 2.83
181 182 2.754552 GCATGCCTGGAGATTGTTTGTA 59.245 45.455 6.36 0.00 0.00 2.41
182 183 3.428045 GCATGCCTGGAGATTGTTTGTAC 60.428 47.826 6.36 0.00 0.00 2.90
183 184 3.788227 TGCCTGGAGATTGTTTGTACT 57.212 42.857 0.00 0.00 0.00 2.73
184 185 4.098914 TGCCTGGAGATTGTTTGTACTT 57.901 40.909 0.00 0.00 0.00 2.24
185 186 5.235850 TGCCTGGAGATTGTTTGTACTTA 57.764 39.130 0.00 0.00 0.00 2.24
186 187 5.626142 TGCCTGGAGATTGTTTGTACTTAA 58.374 37.500 0.00 0.00 0.00 1.85
187 188 6.245408 TGCCTGGAGATTGTTTGTACTTAAT 58.755 36.000 0.00 0.00 0.00 1.40
188 189 6.719370 TGCCTGGAGATTGTTTGTACTTAATT 59.281 34.615 0.00 0.00 0.00 1.40
189 190 7.232534 TGCCTGGAGATTGTTTGTACTTAATTT 59.767 33.333 0.00 0.00 0.00 1.82
190 191 8.736244 GCCTGGAGATTGTTTGTACTTAATTTA 58.264 33.333 0.00 0.00 0.00 1.40
192 193 9.774742 CTGGAGATTGTTTGTACTTAATTTAGC 57.225 33.333 0.00 0.00 0.00 3.09
193 194 9.290988 TGGAGATTGTTTGTACTTAATTTAGCA 57.709 29.630 0.00 0.00 0.00 3.49
194 195 9.774742 GGAGATTGTTTGTACTTAATTTAGCAG 57.225 33.333 0.00 0.00 0.00 4.24
241 242 7.770801 TTTTATCGTATGTCCTGATTCAGTG 57.229 36.000 12.54 4.65 0.00 3.66
242 243 6.465439 TTATCGTATGTCCTGATTCAGTGT 57.535 37.500 12.54 0.00 0.00 3.55
243 244 4.801330 TCGTATGTCCTGATTCAGTGTT 57.199 40.909 12.54 0.00 0.00 3.32
244 245 5.147330 TCGTATGTCCTGATTCAGTGTTT 57.853 39.130 12.54 0.00 0.00 2.83
245 246 4.929211 TCGTATGTCCTGATTCAGTGTTTG 59.071 41.667 12.54 0.00 0.00 2.93
246 247 4.436050 CGTATGTCCTGATTCAGTGTTTGC 60.436 45.833 12.54 0.00 0.00 3.68
247 248 2.929641 TGTCCTGATTCAGTGTTTGCA 58.070 42.857 12.54 0.00 0.00 4.08
248 249 2.618241 TGTCCTGATTCAGTGTTTGCAC 59.382 45.455 12.54 0.00 45.57 4.57
286 287 9.394767 TCATCTTTGCATCTTGCTAGTAAAATA 57.605 29.630 0.75 0.00 45.31 1.40
292 293 7.706159 TGCATCTTGCTAGTAAAATATGTTGG 58.294 34.615 0.75 0.00 45.31 3.77
295 296 7.320443 TCTTGCTAGTAAAATATGTTGGCTG 57.680 36.000 0.00 0.00 0.00 4.85
301 302 4.949856 AGTAAAATATGTTGGCTGGTGGAG 59.050 41.667 0.00 0.00 0.00 3.86
306 307 0.325933 TGTTGGCTGGTGGAGAGATG 59.674 55.000 0.00 0.00 0.00 2.90
339 340 5.065613 ACATGCCCCTTGTATGATATTGT 57.934 39.130 0.00 0.00 39.21 2.71
342 343 4.717877 TGCCCCTTGTATGATATTGTGAG 58.282 43.478 0.00 0.00 0.00 3.51
344 345 5.368230 TGCCCCTTGTATGATATTGTGAGTA 59.632 40.000 0.00 0.00 0.00 2.59
346 347 6.467677 CCCCTTGTATGATATTGTGAGTAGG 58.532 44.000 0.00 0.00 0.00 3.18
357 358 8.758829 TGATATTGTGAGTAGGTGTAATCAGTT 58.241 33.333 0.00 0.00 34.01 3.16
360 361 7.534723 TTGTGAGTAGGTGTAATCAGTTAGT 57.465 36.000 0.00 0.00 34.01 2.24
361 362 6.920817 TGTGAGTAGGTGTAATCAGTTAGTG 58.079 40.000 0.00 0.00 34.01 2.74
362 363 6.492429 TGTGAGTAGGTGTAATCAGTTAGTGT 59.508 38.462 0.00 0.00 34.01 3.55
363 364 7.014905 TGTGAGTAGGTGTAATCAGTTAGTGTT 59.985 37.037 0.00 0.00 34.01 3.32
364 365 8.517878 GTGAGTAGGTGTAATCAGTTAGTGTTA 58.482 37.037 0.00 0.00 34.01 2.41
365 366 9.081204 TGAGTAGGTGTAATCAGTTAGTGTTAA 57.919 33.333 0.00 0.00 29.94 2.01
370 371 9.010029 AGGTGTAATCAGTTAGTGTTAATTTGG 57.990 33.333 0.00 0.00 0.00 3.28
404 405 6.660521 TCTCATTGACTTGAAGTTTGCCATAT 59.339 34.615 0.00 0.00 0.00 1.78
406 407 8.347004 TCATTGACTTGAAGTTTGCCATATAA 57.653 30.769 0.00 0.00 0.00 0.98
414 415 5.476599 TGAAGTTTGCCATATAAGTGCTGTT 59.523 36.000 0.00 0.00 0.00 3.16
437 438 7.812191 TGTTTATAAATGTTCATTTCGCTGCTT 59.188 29.630 13.03 0.00 0.00 3.91
460 461 8.512138 GCTTATTTGGTTGTGTAAGAAGTGTAT 58.488 33.333 0.00 0.00 0.00 2.29
513 514 3.879295 TCCAATGTCTATTTAGCTGCTGC 59.121 43.478 13.43 7.62 40.05 5.25
527 528 0.032403 TGCTGCTGATTTGGTTGTGC 59.968 50.000 0.00 0.00 0.00 4.57
533 534 3.560481 TGCTGATTTGGTTGTGCATTTTG 59.440 39.130 0.00 0.00 0.00 2.44
552 553 6.463995 TTTTGCTAGCTTCCTTTCTTCAAA 57.536 33.333 17.23 0.23 0.00 2.69
562 563 6.072230 GCTTCCTTTCTTCAAAGATGCTTAGT 60.072 38.462 0.00 0.00 41.60 2.24
615 616 9.965902 AATAATGTAGACCTTTCTCTTCAATGT 57.034 29.630 0.00 0.00 32.75 2.71
704 706 5.656480 TCTTTCACTTGTTTTAAACCAGGC 58.344 37.500 12.48 0.00 0.00 4.85
779 784 7.014615 ACCTTCTTTTATGTCTGAACAAGCATT 59.985 33.333 0.00 0.00 39.30 3.56
813 818 1.704628 TCAGTTGGATTGCTGGGAGAA 59.295 47.619 0.00 0.00 33.81 2.87
919 924 2.908428 TTGCCACTGCCTGTGCTG 60.908 61.111 0.00 0.00 44.92 4.41
925 930 1.543208 CCACTGCCTGTGCTGAAAGTA 60.543 52.381 0.00 0.00 44.92 2.24
980 1000 2.809299 GCCACATCTGATAGCATCTGCA 60.809 50.000 4.79 0.00 45.16 4.41
992 1012 2.683867 AGCATCTGCAGCAGAAAGATTC 59.316 45.455 28.78 13.44 44.04 2.52
1267 1287 1.035139 CACTTCAAAGCTGGCTGGTT 58.965 50.000 2.78 2.78 38.10 3.67
1587 1607 0.179161 CGTCCAAGGAGAGTACTGCG 60.179 60.000 0.00 0.00 39.46 5.18
1806 1853 0.250467 TGCTTGCCACTGAAGAGACC 60.250 55.000 0.00 0.00 0.00 3.85
1841 1897 3.650950 GGCCCAGCACAAGGAGGA 61.651 66.667 0.00 0.00 0.00 3.71
1872 1928 1.888512 GGCACATCAAAGGCTGAAGAA 59.111 47.619 0.00 0.00 37.67 2.52
2014 2073 2.935481 CCCTGCCCCTGAAGGACA 60.935 66.667 0.00 0.00 38.24 4.02
2148 2207 1.203441 TGCTCCTGCTCCAGTCCATT 61.203 55.000 0.00 0.00 40.48 3.16
2526 2655 0.603707 AGCACCGTGTGATGGACAAG 60.604 55.000 8.04 0.00 35.91 3.16
2541 2670 3.128349 GGACAAGTTGCGTTGAAGACTA 58.872 45.455 1.81 0.00 0.00 2.59
2628 2758 3.970610 CGCTGTCACTTGATTGTCTTTTG 59.029 43.478 0.00 0.00 0.00 2.44
2634 2764 7.028962 TGTCACTTGATTGTCTTTTGAAGTTG 58.971 34.615 0.00 0.00 0.00 3.16
2635 2765 7.029563 GTCACTTGATTGTCTTTTGAAGTTGT 58.970 34.615 0.00 0.00 0.00 3.32
2636 2766 7.008628 GTCACTTGATTGTCTTTTGAAGTTGTG 59.991 37.037 0.00 0.00 0.00 3.33
2637 2767 6.808212 CACTTGATTGTCTTTTGAAGTTGTGT 59.192 34.615 0.00 0.00 0.00 3.72
2638 2768 7.329226 CACTTGATTGTCTTTTGAAGTTGTGTT 59.671 33.333 0.00 0.00 0.00 3.32
2639 2769 7.872483 ACTTGATTGTCTTTTGAAGTTGTGTTT 59.128 29.630 0.00 0.00 0.00 2.83
2640 2770 7.579589 TGATTGTCTTTTGAAGTTGTGTTTG 57.420 32.000 0.00 0.00 0.00 2.93
2641 2771 7.374272 TGATTGTCTTTTGAAGTTGTGTTTGA 58.626 30.769 0.00 0.00 0.00 2.69
2666 2804 1.273886 TCCGTCATTGTCGTGGATCAA 59.726 47.619 0.00 0.00 0.00 2.57
2680 2818 5.293324 TCGTGGATCAATATTTGAAACGGAG 59.707 40.000 16.43 2.05 43.95 4.63
2681 2819 5.273944 GTGGATCAATATTTGAAACGGAGC 58.726 41.667 0.00 0.00 43.95 4.70
2693 2831 5.250235 TGAAACGGAGCAATGTTTGTAAA 57.750 34.783 5.15 0.00 38.35 2.01
2694 2832 5.651530 TGAAACGGAGCAATGTTTGTAAAA 58.348 33.333 5.15 0.00 38.35 1.52
2695 2833 6.100004 TGAAACGGAGCAATGTTTGTAAAAA 58.900 32.000 5.15 0.00 38.35 1.94
2718 2856 6.911250 AAAATTGTATCCGACCTTTTTCCT 57.089 33.333 0.00 0.00 0.00 3.36
2720 2858 6.997239 AATTGTATCCGACCTTTTTCCTAC 57.003 37.500 0.00 0.00 0.00 3.18
2722 2860 5.334724 TGTATCCGACCTTTTTCCTACTC 57.665 43.478 0.00 0.00 0.00 2.59
2726 2864 2.305052 CCGACCTTTTTCCTACTCCCTT 59.695 50.000 0.00 0.00 0.00 3.95
2728 2866 3.751698 CGACCTTTTTCCTACTCCCTTTG 59.248 47.826 0.00 0.00 0.00 2.77
2729 2867 4.726583 GACCTTTTTCCTACTCCCTTTGT 58.273 43.478 0.00 0.00 0.00 2.83
2732 2870 5.597182 ACCTTTTTCCTACTCCCTTTGTTTC 59.403 40.000 0.00 0.00 0.00 2.78
2735 2873 4.781775 TTCCTACTCCCTTTGTTTCACA 57.218 40.909 0.00 0.00 0.00 3.58
2736 2874 4.781775 TCCTACTCCCTTTGTTTCACAA 57.218 40.909 0.00 0.00 36.11 3.33
2737 2875 5.319043 TCCTACTCCCTTTGTTTCACAAT 57.681 39.130 0.00 0.00 38.00 2.71
2738 2876 5.070001 TCCTACTCCCTTTGTTTCACAATG 58.930 41.667 0.00 0.00 38.00 2.82
2739 2877 4.827284 CCTACTCCCTTTGTTTCACAATGT 59.173 41.667 0.00 0.00 38.00 2.71
2740 2878 6.001460 CCTACTCCCTTTGTTTCACAATGTA 58.999 40.000 0.00 0.00 38.00 2.29
2741 2879 6.149474 CCTACTCCCTTTGTTTCACAATGTAG 59.851 42.308 0.00 0.00 38.00 2.74
2742 2880 5.445964 ACTCCCTTTGTTTCACAATGTAGT 58.554 37.500 0.00 0.00 38.00 2.73
2743 2881 5.891551 ACTCCCTTTGTTTCACAATGTAGTT 59.108 36.000 0.00 0.00 38.00 2.24
2744 2882 6.142818 TCCCTTTGTTTCACAATGTAGTTG 57.857 37.500 0.00 0.00 38.00 3.16
2755 2893 4.836125 CAATGTAGTTGTGCCTGAACTT 57.164 40.909 0.00 0.00 35.30 2.66
2756 2894 5.186996 CAATGTAGTTGTGCCTGAACTTT 57.813 39.130 0.00 0.00 35.30 2.66
2757 2895 5.215160 CAATGTAGTTGTGCCTGAACTTTC 58.785 41.667 0.00 0.00 35.30 2.62
2758 2896 2.869801 TGTAGTTGTGCCTGAACTTTCG 59.130 45.455 0.00 0.00 35.30 3.46
2759 2897 2.325583 AGTTGTGCCTGAACTTTCGA 57.674 45.000 0.00 0.00 28.94 3.71
2760 2898 2.213499 AGTTGTGCCTGAACTTTCGAG 58.787 47.619 0.00 0.00 28.94 4.04
2761 2899 2.158957 AGTTGTGCCTGAACTTTCGAGA 60.159 45.455 0.00 0.00 28.94 4.04
2762 2900 2.808543 GTTGTGCCTGAACTTTCGAGAT 59.191 45.455 0.00 0.00 0.00 2.75
2763 2901 2.688507 TGTGCCTGAACTTTCGAGATC 58.311 47.619 0.00 0.00 0.00 2.75
2764 2902 2.300152 TGTGCCTGAACTTTCGAGATCT 59.700 45.455 0.00 0.00 0.00 2.75
2765 2903 3.509967 TGTGCCTGAACTTTCGAGATCTA 59.490 43.478 0.00 0.00 0.00 1.98
2766 2904 4.021456 TGTGCCTGAACTTTCGAGATCTAA 60.021 41.667 0.00 0.00 0.00 2.10
2767 2905 4.929808 GTGCCTGAACTTTCGAGATCTAAA 59.070 41.667 0.00 0.00 0.00 1.85
2768 2906 5.582665 GTGCCTGAACTTTCGAGATCTAAAT 59.417 40.000 0.00 0.00 0.00 1.40
2769 2907 6.092807 GTGCCTGAACTTTCGAGATCTAAATT 59.907 38.462 0.00 0.00 0.00 1.82
2770 2908 6.655003 TGCCTGAACTTTCGAGATCTAAATTT 59.345 34.615 0.00 0.00 0.00 1.82
2771 2909 6.963805 GCCTGAACTTTCGAGATCTAAATTTG 59.036 38.462 0.00 0.00 0.00 2.32
2772 2910 7.148407 GCCTGAACTTTCGAGATCTAAATTTGA 60.148 37.037 0.00 0.00 0.00 2.69
2773 2911 8.887717 CCTGAACTTTCGAGATCTAAATTTGAT 58.112 33.333 0.00 2.08 0.00 2.57
2774 2912 9.913451 CTGAACTTTCGAGATCTAAATTTGATC 57.087 33.333 16.47 16.47 40.26 2.92
2775 2913 9.435688 TGAACTTTCGAGATCTAAATTTGATCA 57.564 29.630 21.90 0.00 41.85 2.92
2794 2932 8.945481 TTGATCATAAATTTAACCAATGCCTG 57.055 30.769 1.21 0.00 0.00 4.85
2795 2933 8.076910 TGATCATAAATTTAACCAATGCCTGT 57.923 30.769 1.21 0.00 0.00 4.00
2796 2934 9.194972 TGATCATAAATTTAACCAATGCCTGTA 57.805 29.630 1.21 0.00 0.00 2.74
2797 2935 9.463443 GATCATAAATTTAACCAATGCCTGTAC 57.537 33.333 1.21 0.00 0.00 2.90
2798 2936 8.588290 TCATAAATTTAACCAATGCCTGTACT 57.412 30.769 1.21 0.00 0.00 2.73
2799 2937 9.030452 TCATAAATTTAACCAATGCCTGTACTT 57.970 29.630 1.21 0.00 0.00 2.24
2800 2938 9.651913 CATAAATTTAACCAATGCCTGTACTTT 57.348 29.630 1.21 0.00 0.00 2.66
2801 2939 9.869757 ATAAATTTAACCAATGCCTGTACTTTC 57.130 29.630 1.21 0.00 0.00 2.62
2802 2940 5.365403 TTTAACCAATGCCTGTACTTTCG 57.635 39.130 0.00 0.00 0.00 3.46
2803 2941 2.851263 ACCAATGCCTGTACTTTCGA 57.149 45.000 0.00 0.00 0.00 3.71
2804 2942 2.699954 ACCAATGCCTGTACTTTCGAG 58.300 47.619 0.00 0.00 0.00 4.04
2805 2943 2.301870 ACCAATGCCTGTACTTTCGAGA 59.698 45.455 0.00 0.00 0.00 4.04
2806 2944 3.055094 ACCAATGCCTGTACTTTCGAGAT 60.055 43.478 0.00 0.00 0.00 2.75
2807 2945 3.557595 CCAATGCCTGTACTTTCGAGATC 59.442 47.826 0.00 0.00 0.00 2.75
2808 2946 4.437239 CAATGCCTGTACTTTCGAGATCT 58.563 43.478 0.00 0.00 0.00 2.75
2809 2947 5.451937 CCAATGCCTGTACTTTCGAGATCTA 60.452 44.000 0.00 0.00 0.00 1.98
2810 2948 5.854010 ATGCCTGTACTTTCGAGATCTAA 57.146 39.130 0.00 0.00 0.00 2.10
2811 2949 5.654603 TGCCTGTACTTTCGAGATCTAAA 57.345 39.130 0.00 0.00 0.00 1.85
2812 2950 6.222038 TGCCTGTACTTTCGAGATCTAAAT 57.778 37.500 0.00 0.00 0.00 1.40
2813 2951 6.640518 TGCCTGTACTTTCGAGATCTAAATT 58.359 36.000 0.00 0.00 0.00 1.82
2814 2952 7.103641 TGCCTGTACTTTCGAGATCTAAATTT 58.896 34.615 0.00 0.00 0.00 1.82
2815 2953 7.064609 TGCCTGTACTTTCGAGATCTAAATTTG 59.935 37.037 0.00 0.00 0.00 2.32
2816 2954 7.277981 GCCTGTACTTTCGAGATCTAAATTTGA 59.722 37.037 0.00 0.00 0.00 2.69
2817 2955 9.319143 CCTGTACTTTCGAGATCTAAATTTGAT 57.681 33.333 0.00 2.08 0.00 2.57
2819 2957 9.869757 TGTACTTTCGAGATCTAAATTTGATCA 57.130 29.630 21.90 0.00 41.85 2.92
2847 2985 2.629763 AAACGAGTTTGACGGCGC 59.370 55.556 6.90 0.00 34.93 6.53
2848 2986 2.174969 AAACGAGTTTGACGGCGCA 61.175 52.632 10.83 2.81 34.93 6.09
2849 2987 1.707239 AAACGAGTTTGACGGCGCAA 61.707 50.000 10.83 9.89 34.93 4.85
2850 2988 2.101209 AACGAGTTTGACGGCGCAAG 62.101 55.000 10.83 4.90 43.44 4.01
2851 2989 2.307309 CGAGTTTGACGGCGCAAGA 61.307 57.895 10.83 1.36 43.02 3.02
2852 2990 1.827315 CGAGTTTGACGGCGCAAGAA 61.827 55.000 10.83 0.00 43.02 2.52
2853 2991 0.306533 GAGTTTGACGGCGCAAGAAA 59.693 50.000 10.83 0.00 43.02 2.52
2854 2992 0.307760 AGTTTGACGGCGCAAGAAAG 59.692 50.000 10.83 0.00 43.02 2.62
2855 2993 1.008995 TTTGACGGCGCAAGAAAGC 60.009 52.632 10.83 0.00 43.02 3.51
2873 3011 2.445274 CGTGAGCGCACTACATTGT 58.555 52.632 18.64 0.00 42.93 2.71
2874 3012 0.790207 CGTGAGCGCACTACATTGTT 59.210 50.000 18.64 0.00 42.93 2.83
2875 3013 1.462378 CGTGAGCGCACTACATTGTTG 60.462 52.381 18.64 0.00 42.93 3.33
2876 3014 1.798223 GTGAGCGCACTACATTGTTGA 59.202 47.619 13.84 0.00 41.84 3.18
2877 3015 2.223144 GTGAGCGCACTACATTGTTGAA 59.777 45.455 13.84 0.00 41.84 2.69
2878 3016 3.073678 TGAGCGCACTACATTGTTGAAT 58.926 40.909 11.47 0.00 0.00 2.57
2879 3017 3.120234 TGAGCGCACTACATTGTTGAATG 60.120 43.478 11.47 0.00 44.11 2.67
2880 3018 2.162208 AGCGCACTACATTGTTGAATGG 59.838 45.455 11.47 0.00 43.00 3.16
2881 3019 2.161410 GCGCACTACATTGTTGAATGGA 59.839 45.455 0.30 0.00 43.00 3.41
2891 3029 6.950842 ACATTGTTGAATGGAGAGAGTATCA 58.049 36.000 0.00 0.00 43.00 2.15
2892 3030 7.571919 ACATTGTTGAATGGAGAGAGTATCAT 58.428 34.615 0.00 0.00 43.00 2.45
2893 3031 8.051535 ACATTGTTGAATGGAGAGAGTATCATT 58.948 33.333 0.00 0.00 43.00 2.57
2894 3032 7.854557 TTGTTGAATGGAGAGAGTATCATTG 57.145 36.000 0.00 0.00 37.82 2.82
2895 3033 6.950842 TGTTGAATGGAGAGAGTATCATTGT 58.049 36.000 0.00 0.00 37.82 2.71
2896 3034 8.078060 TGTTGAATGGAGAGAGTATCATTGTA 57.922 34.615 0.00 0.00 37.82 2.41
2897 3035 8.200120 TGTTGAATGGAGAGAGTATCATTGTAG 58.800 37.037 0.00 0.00 37.82 2.74
2898 3036 7.904558 TGAATGGAGAGAGTATCATTGTAGT 57.095 36.000 0.00 0.00 37.82 2.73
2899 3037 7.946207 TGAATGGAGAGAGTATCATTGTAGTC 58.054 38.462 0.00 0.00 37.82 2.59
2900 3038 6.909550 ATGGAGAGAGTATCATTGTAGTCC 57.090 41.667 0.00 0.00 37.82 3.85
2901 3039 6.019656 TGGAGAGAGTATCATTGTAGTCCT 57.980 41.667 0.00 0.00 37.82 3.85
2902 3040 6.436027 TGGAGAGAGTATCATTGTAGTCCTT 58.564 40.000 0.00 0.00 37.82 3.36
2921 3059 4.842380 TCCTTGGTATATAACTGCCTACCC 59.158 45.833 0.00 0.00 34.05 3.69
2923 3061 5.309806 CCTTGGTATATAACTGCCTACCCTT 59.690 44.000 0.00 0.00 34.05 3.95
2924 3062 6.429521 TTGGTATATAACTGCCTACCCTTC 57.570 41.667 0.00 0.00 34.05 3.46
2925 3063 5.723355 TGGTATATAACTGCCTACCCTTCT 58.277 41.667 0.00 0.00 34.05 2.85
2928 3066 6.042897 GGTATATAACTGCCTACCCTTCTGTT 59.957 42.308 0.00 0.00 0.00 3.16
2929 3067 2.568623 AACTGCCTACCCTTCTGTTG 57.431 50.000 0.00 0.00 0.00 3.33
2930 3068 0.036875 ACTGCCTACCCTTCTGTTGC 59.963 55.000 0.00 0.00 0.00 4.17
2931 3069 0.326264 CTGCCTACCCTTCTGTTGCT 59.674 55.000 0.00 0.00 0.00 3.91
2932 3070 0.324943 TGCCTACCCTTCTGTTGCTC 59.675 55.000 0.00 0.00 0.00 4.26
2935 3264 0.608640 CTACCCTTCTGTTGCTCGGT 59.391 55.000 0.00 0.00 0.00 4.69
2938 3267 1.628846 ACCCTTCTGTTGCTCGGTATT 59.371 47.619 0.00 0.00 0.00 1.89
2939 3268 2.835764 ACCCTTCTGTTGCTCGGTATTA 59.164 45.455 0.00 0.00 0.00 0.98
2943 3272 4.094442 CCTTCTGTTGCTCGGTATTAAACC 59.906 45.833 0.00 0.00 45.77 3.27
2948 3277 3.825143 TGCTCGGTATTAAACCCTACC 57.175 47.619 0.00 0.00 46.62 3.18
2949 3278 3.106054 TGCTCGGTATTAAACCCTACCA 58.894 45.455 4.34 0.00 46.62 3.25
2950 3279 3.118665 TGCTCGGTATTAAACCCTACCAC 60.119 47.826 4.34 0.00 46.62 4.16
2958 3287 6.522977 GGTATTAAACCCTACCACAAAGGTCT 60.523 42.308 0.00 0.00 45.25 3.85
2959 3288 7.964891 GGTATTAAACCCTACCACAAAGGTCTT 60.965 40.741 0.00 0.00 45.25 3.01
2968 3297 3.000727 CCACAAAGGTCTTTAGCGGTAG 58.999 50.000 0.00 0.00 0.00 3.18
2971 3300 1.201424 AAGGTCTTTAGCGGTAGGGG 58.799 55.000 0.00 0.00 0.00 4.79
2972 3301 1.145598 GGTCTTTAGCGGTAGGGGC 59.854 63.158 0.00 0.00 0.00 5.80
2973 3302 1.335882 GGTCTTTAGCGGTAGGGGCT 61.336 60.000 0.00 0.00 44.35 5.19
2975 3304 1.758862 GTCTTTAGCGGTAGGGGCTTA 59.241 52.381 0.00 0.00 41.80 3.09
2976 3305 1.758862 TCTTTAGCGGTAGGGGCTTAC 59.241 52.381 0.00 0.00 41.80 2.34
2977 3306 1.761198 CTTTAGCGGTAGGGGCTTACT 59.239 52.381 0.00 0.00 41.80 2.24
2978 3307 1.870064 TTAGCGGTAGGGGCTTACTT 58.130 50.000 0.00 0.00 41.80 2.24
2979 3308 1.870064 TAGCGGTAGGGGCTTACTTT 58.130 50.000 0.00 0.00 41.80 2.66
2980 3309 1.870064 AGCGGTAGGGGCTTACTTTA 58.130 50.000 0.00 0.00 37.50 1.85
2983 3312 3.969312 AGCGGTAGGGGCTTACTTTATAA 59.031 43.478 0.00 0.00 37.50 0.98
2984 3313 4.596212 AGCGGTAGGGGCTTACTTTATAAT 59.404 41.667 0.00 0.00 37.50 1.28
2985 3314 5.072736 AGCGGTAGGGGCTTACTTTATAATT 59.927 40.000 0.00 0.00 37.50 1.40
2986 3315 5.180680 GCGGTAGGGGCTTACTTTATAATTG 59.819 44.000 0.00 0.00 0.00 2.32
2987 3316 6.293698 CGGTAGGGGCTTACTTTATAATTGT 58.706 40.000 0.00 0.00 0.00 2.71
2988 3317 7.444299 CGGTAGGGGCTTACTTTATAATTGTA 58.556 38.462 0.00 0.00 0.00 2.41
2989 3318 7.933033 CGGTAGGGGCTTACTTTATAATTGTAA 59.067 37.037 9.66 9.66 0.00 2.41
2990 3319 9.803507 GGTAGGGGCTTACTTTATAATTGTAAT 57.196 33.333 10.19 2.13 0.00 1.89
3030 3378 9.712305 TTCCATAGTTCTCTTTCTAAGTTTCAG 57.288 33.333 0.00 0.00 0.00 3.02
3055 3403 9.845740 AGTAATGAATATAAATAGCACCACACA 57.154 29.630 0.00 0.00 0.00 3.72
3057 3405 8.752005 AATGAATATAAATAGCACCACACAGT 57.248 30.769 0.00 0.00 0.00 3.55
3058 3406 9.845740 AATGAATATAAATAGCACCACACAGTA 57.154 29.630 0.00 0.00 0.00 2.74
3059 3407 9.845740 ATGAATATAAATAGCACCACACAGTAA 57.154 29.630 0.00 0.00 0.00 2.24
3060 3408 9.104965 TGAATATAAATAGCACCACACAGTAAC 57.895 33.333 0.00 0.00 0.00 2.50
3061 3409 9.104965 GAATATAAATAGCACCACACAGTAACA 57.895 33.333 0.00 0.00 0.00 2.41
3062 3410 9.627123 AATATAAATAGCACCACACAGTAACAT 57.373 29.630 0.00 0.00 0.00 2.71
3065 3413 6.737254 AATAGCACCACACAGTAACATAAC 57.263 37.500 0.00 0.00 0.00 1.89
3066 3414 4.351874 AGCACCACACAGTAACATAACT 57.648 40.909 0.00 0.00 0.00 2.24
3067 3415 4.714632 AGCACCACACAGTAACATAACTT 58.285 39.130 0.00 0.00 0.00 2.66
3068 3416 4.515191 AGCACCACACAGTAACATAACTTG 59.485 41.667 0.00 0.00 0.00 3.16
3069 3417 4.513692 GCACCACACAGTAACATAACTTGA 59.486 41.667 0.00 0.00 0.00 3.02
3070 3418 5.008217 GCACCACACAGTAACATAACTTGAA 59.992 40.000 0.00 0.00 0.00 2.69
3071 3419 6.427150 CACCACACAGTAACATAACTTGAAC 58.573 40.000 0.00 0.00 0.00 3.18
3072 3420 6.037720 CACCACACAGTAACATAACTTGAACA 59.962 38.462 0.00 0.00 0.00 3.18
3073 3421 6.770785 ACCACACAGTAACATAACTTGAACAT 59.229 34.615 0.00 0.00 0.00 2.71
3074 3422 7.284489 ACCACACAGTAACATAACTTGAACATT 59.716 33.333 0.00 0.00 0.00 2.71
3075 3423 8.779303 CCACACAGTAACATAACTTGAACATTA 58.221 33.333 0.00 0.00 0.00 1.90
3114 3462 4.336153 TCACACATCATAACATGCATCACC 59.664 41.667 0.00 0.00 0.00 4.02
3117 3465 3.887110 ACATCATAACATGCATCACCCAG 59.113 43.478 0.00 0.00 0.00 4.45
3119 3467 3.812262 TCATAACATGCATCACCCAGAG 58.188 45.455 0.00 0.00 0.00 3.35
3123 3471 4.719026 AACATGCATCACCCAGAGATAT 57.281 40.909 0.00 0.00 0.00 1.63
3125 3473 5.417754 ACATGCATCACCCAGAGATATAG 57.582 43.478 0.00 0.00 0.00 1.31
3126 3474 4.842948 ACATGCATCACCCAGAGATATAGT 59.157 41.667 0.00 0.00 0.00 2.12
3127 3475 5.046735 ACATGCATCACCCAGAGATATAGTC 60.047 44.000 0.00 0.00 0.00 2.59
3130 3478 4.284490 GCATCACCCAGAGATATAGTCCAA 59.716 45.833 0.00 0.00 0.00 3.53
3131 3479 5.046014 GCATCACCCAGAGATATAGTCCAAT 60.046 44.000 0.00 0.00 0.00 3.16
3132 3480 6.404708 CATCACCCAGAGATATAGTCCAATG 58.595 44.000 0.00 0.00 0.00 2.82
3133 3481 5.467738 TCACCCAGAGATATAGTCCAATGT 58.532 41.667 0.00 0.00 0.00 2.71
3134 3482 6.620429 TCACCCAGAGATATAGTCCAATGTA 58.380 40.000 0.00 0.00 0.00 2.29
3135 3483 6.721668 TCACCCAGAGATATAGTCCAATGTAG 59.278 42.308 0.00 0.00 0.00 2.74
3136 3484 5.482175 ACCCAGAGATATAGTCCAATGTAGC 59.518 44.000 0.00 0.00 0.00 3.58
3137 3485 5.481824 CCCAGAGATATAGTCCAATGTAGCA 59.518 44.000 0.00 0.00 0.00 3.49
3138 3486 6.393990 CCAGAGATATAGTCCAATGTAGCAC 58.606 44.000 0.00 0.00 0.00 4.40
3139 3487 6.015095 CCAGAGATATAGTCCAATGTAGCACA 60.015 42.308 0.00 0.00 0.00 4.57
3140 3488 7.310299 CCAGAGATATAGTCCAATGTAGCACAT 60.310 40.741 0.00 0.00 41.31 3.21
3141 3489 8.743714 CAGAGATATAGTCCAATGTAGCACATA 58.256 37.037 2.80 0.00 37.97 2.29
3142 3490 8.965819 AGAGATATAGTCCAATGTAGCACATAG 58.034 37.037 2.80 0.00 37.97 2.23
3143 3491 8.657387 AGATATAGTCCAATGTAGCACATAGT 57.343 34.615 2.80 0.00 37.97 2.12
3144 3492 9.094578 AGATATAGTCCAATGTAGCACATAGTT 57.905 33.333 2.80 0.00 37.97 2.24
3145 3493 9.712305 GATATAGTCCAATGTAGCACATAGTTT 57.288 33.333 2.80 0.00 37.97 2.66
3148 3496 7.611213 AGTCCAATGTAGCACATAGTTTTAC 57.389 36.000 2.80 0.00 37.97 2.01
3149 3497 7.165485 AGTCCAATGTAGCACATAGTTTTACA 58.835 34.615 2.80 0.00 37.97 2.41
3150 3498 7.829211 AGTCCAATGTAGCACATAGTTTTACAT 59.171 33.333 2.80 0.00 37.97 2.29
3151 3499 9.104965 GTCCAATGTAGCACATAGTTTTACATA 57.895 33.333 2.80 0.00 37.97 2.29
3152 3500 9.845740 TCCAATGTAGCACATAGTTTTACATAT 57.154 29.630 2.80 0.00 37.97 1.78
3225 3573 4.401925 AGCCAACATAAGTTCTGAAGCTT 58.598 39.130 0.00 0.00 35.28 3.74
3246 3594 2.770699 GCACCAAGCTCAATATGCTC 57.229 50.000 0.00 0.00 40.22 4.26
3259 3607 7.175816 AGCTCAATATGCTCGAATACTAGAAGA 59.824 37.037 0.00 0.00 35.67 2.87
3277 3625 3.512033 AGAGAAGTAAGTGACCATCGC 57.488 47.619 0.00 0.00 0.00 4.58
3284 3632 2.366469 AGTGACCATCGCCACTTCT 58.634 52.632 0.00 0.00 40.40 2.85
3292 3640 2.158986 CCATCGCCACTTCTCTCATCTT 60.159 50.000 0.00 0.00 0.00 2.40
3300 3648 4.313282 CACTTCTCTCATCTTGCTCAACA 58.687 43.478 0.00 0.00 0.00 3.33
3302 3650 5.411977 CACTTCTCTCATCTTGCTCAACATT 59.588 40.000 0.00 0.00 0.00 2.71
3320 3668 4.583871 ACATTCGCTTCTTCCTCATCTTT 58.416 39.130 0.00 0.00 0.00 2.52
3323 3671 2.834549 TCGCTTCTTCCTCATCTTTCCT 59.165 45.455 0.00 0.00 0.00 3.36
3326 3674 3.308046 GCTTCTTCCTCATCTTTCCTGGT 60.308 47.826 0.00 0.00 0.00 4.00
3329 3677 3.772025 TCTTCCTCATCTTTCCTGGTCTC 59.228 47.826 0.00 0.00 0.00 3.36
3341 3689 0.325933 CTGGTCTCCTCAACATGGCA 59.674 55.000 0.00 0.00 0.00 4.92
3344 3692 1.271597 GGTCTCCTCAACATGGCAAGT 60.272 52.381 0.00 0.00 0.00 3.16
3349 3697 1.069022 CCTCAACATGGCAAGTCAACG 60.069 52.381 0.00 0.00 0.00 4.10
3354 3702 2.034879 ATGGCAAGTCAACGAGGCG 61.035 57.895 0.00 0.00 0.00 5.52
3355 3703 3.423154 GGCAAGTCAACGAGGCGG 61.423 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.482627 GGAAATCTAGACCATATAACAGACAAG 57.517 37.037 0.00 0.00 0.00 3.16
3 4 8.429641 GGGAAATCTAGACCATATAACAGACAA 58.570 37.037 0.00 0.00 0.00 3.18
4 5 7.789831 AGGGAAATCTAGACCATATAACAGACA 59.210 37.037 0.00 0.00 0.00 3.41
5 6 8.196378 AGGGAAATCTAGACCATATAACAGAC 57.804 38.462 0.00 0.00 0.00 3.51
6 7 8.798975 AAGGGAAATCTAGACCATATAACAGA 57.201 34.615 0.00 0.00 0.00 3.41
7 8 8.097662 GGAAGGGAAATCTAGACCATATAACAG 58.902 40.741 0.00 0.00 0.00 3.16
8 9 7.794683 AGGAAGGGAAATCTAGACCATATAACA 59.205 37.037 0.00 0.00 0.00 2.41
9 10 8.208575 AGGAAGGGAAATCTAGACCATATAAC 57.791 38.462 0.00 0.00 0.00 1.89
10 11 8.016652 TGAGGAAGGGAAATCTAGACCATATAA 58.983 37.037 0.00 0.00 0.00 0.98
11 12 7.544650 TGAGGAAGGGAAATCTAGACCATATA 58.455 38.462 0.00 0.00 0.00 0.86
12 13 6.393897 TGAGGAAGGGAAATCTAGACCATAT 58.606 40.000 0.00 0.00 0.00 1.78
13 14 5.788430 TGAGGAAGGGAAATCTAGACCATA 58.212 41.667 0.00 0.00 0.00 2.74
14 15 4.635473 TGAGGAAGGGAAATCTAGACCAT 58.365 43.478 0.00 0.00 0.00 3.55
15 16 4.033709 CTGAGGAAGGGAAATCTAGACCA 58.966 47.826 0.00 0.00 0.00 4.02
16 17 4.034410 ACTGAGGAAGGGAAATCTAGACC 58.966 47.826 0.00 0.00 0.00 3.85
17 18 6.987403 ATACTGAGGAAGGGAAATCTAGAC 57.013 41.667 0.00 0.00 0.00 2.59
18 19 7.403231 ACAAATACTGAGGAAGGGAAATCTAGA 59.597 37.037 0.00 0.00 0.00 2.43
19 20 7.569240 ACAAATACTGAGGAAGGGAAATCTAG 58.431 38.462 0.00 0.00 0.00 2.43
20 21 7.510675 ACAAATACTGAGGAAGGGAAATCTA 57.489 36.000 0.00 0.00 0.00 1.98
21 22 6.394345 ACAAATACTGAGGAAGGGAAATCT 57.606 37.500 0.00 0.00 0.00 2.40
22 23 7.363007 GGAAACAAATACTGAGGAAGGGAAATC 60.363 40.741 0.00 0.00 0.00 2.17
23 24 6.437477 GGAAACAAATACTGAGGAAGGGAAAT 59.563 38.462 0.00 0.00 0.00 2.17
24 25 5.773176 GGAAACAAATACTGAGGAAGGGAAA 59.227 40.000 0.00 0.00 0.00 3.13
25 26 5.163034 TGGAAACAAATACTGAGGAAGGGAA 60.163 40.000 0.00 0.00 37.44 3.97
26 27 4.352595 TGGAAACAAATACTGAGGAAGGGA 59.647 41.667 0.00 0.00 37.44 4.20
27 28 4.662278 TGGAAACAAATACTGAGGAAGGG 58.338 43.478 0.00 0.00 37.44 3.95
42 43 9.473007 TCAATCCATTCAACTATATTGGAAACA 57.527 29.630 0.00 0.00 39.74 2.83
43 44 9.956720 CTCAATCCATTCAACTATATTGGAAAC 57.043 33.333 0.00 0.00 39.74 2.78
44 45 9.135189 CCTCAATCCATTCAACTATATTGGAAA 57.865 33.333 0.00 0.00 39.74 3.13
45 46 8.281531 ACCTCAATCCATTCAACTATATTGGAA 58.718 33.333 0.00 0.00 39.74 3.53
46 47 7.815383 ACCTCAATCCATTCAACTATATTGGA 58.185 34.615 0.00 0.00 40.54 3.53
47 48 7.095060 CGACCTCAATCCATTCAACTATATTGG 60.095 40.741 0.00 0.00 0.00 3.16
48 49 7.442364 ACGACCTCAATCCATTCAACTATATTG 59.558 37.037 0.00 0.00 0.00 1.90
49 50 7.509546 ACGACCTCAATCCATTCAACTATATT 58.490 34.615 0.00 0.00 0.00 1.28
50 51 7.067496 ACGACCTCAATCCATTCAACTATAT 57.933 36.000 0.00 0.00 0.00 0.86
51 52 6.479972 ACGACCTCAATCCATTCAACTATA 57.520 37.500 0.00 0.00 0.00 1.31
52 53 5.359194 ACGACCTCAATCCATTCAACTAT 57.641 39.130 0.00 0.00 0.00 2.12
53 54 4.819105 ACGACCTCAATCCATTCAACTA 57.181 40.909 0.00 0.00 0.00 2.24
54 55 3.703001 ACGACCTCAATCCATTCAACT 57.297 42.857 0.00 0.00 0.00 3.16
55 56 3.119849 CCAACGACCTCAATCCATTCAAC 60.120 47.826 0.00 0.00 0.00 3.18
56 57 3.081061 CCAACGACCTCAATCCATTCAA 58.919 45.455 0.00 0.00 0.00 2.69
57 58 2.617788 CCCAACGACCTCAATCCATTCA 60.618 50.000 0.00 0.00 0.00 2.57
58 59 2.017049 CCCAACGACCTCAATCCATTC 58.983 52.381 0.00 0.00 0.00 2.67
59 60 1.354368 ACCCAACGACCTCAATCCATT 59.646 47.619 0.00 0.00 0.00 3.16
60 61 0.991920 ACCCAACGACCTCAATCCAT 59.008 50.000 0.00 0.00 0.00 3.41
61 62 0.768622 AACCCAACGACCTCAATCCA 59.231 50.000 0.00 0.00 0.00 3.41
62 63 1.003233 AGAACCCAACGACCTCAATCC 59.997 52.381 0.00 0.00 0.00 3.01
63 64 2.474410 AGAACCCAACGACCTCAATC 57.526 50.000 0.00 0.00 0.00 2.67
64 65 2.635915 TGTAGAACCCAACGACCTCAAT 59.364 45.455 0.00 0.00 0.00 2.57
65 66 2.040939 TGTAGAACCCAACGACCTCAA 58.959 47.619 0.00 0.00 0.00 3.02
66 67 1.707106 TGTAGAACCCAACGACCTCA 58.293 50.000 0.00 0.00 0.00 3.86
67 68 2.825861 TTGTAGAACCCAACGACCTC 57.174 50.000 0.00 0.00 0.00 3.85
68 69 3.782656 ATTTGTAGAACCCAACGACCT 57.217 42.857 0.00 0.00 0.00 3.85
69 70 3.816523 TGAATTTGTAGAACCCAACGACC 59.183 43.478 0.00 0.00 0.00 4.79
70 71 4.514066 ACTGAATTTGTAGAACCCAACGAC 59.486 41.667 0.00 0.00 0.00 4.34
71 72 4.710324 ACTGAATTTGTAGAACCCAACGA 58.290 39.130 0.00 0.00 0.00 3.85
72 73 5.432885 AACTGAATTTGTAGAACCCAACG 57.567 39.130 0.00 0.00 0.00 4.10
73 74 9.406828 GATAAAACTGAATTTGTAGAACCCAAC 57.593 33.333 0.00 0.00 0.00 3.77
74 75 9.362151 AGATAAAACTGAATTTGTAGAACCCAA 57.638 29.630 0.00 0.00 0.00 4.12
75 76 8.934023 AGATAAAACTGAATTTGTAGAACCCA 57.066 30.769 0.00 0.00 0.00 4.51
87 88 9.401058 CCTCCATGTAGAAAGATAAAACTGAAT 57.599 33.333 0.00 0.00 0.00 2.57
88 89 7.336931 GCCTCCATGTAGAAAGATAAAACTGAA 59.663 37.037 0.00 0.00 0.00 3.02
89 90 6.823689 GCCTCCATGTAGAAAGATAAAACTGA 59.176 38.462 0.00 0.00 0.00 3.41
90 91 6.599244 TGCCTCCATGTAGAAAGATAAAACTG 59.401 38.462 0.00 0.00 0.00 3.16
91 92 6.721318 TGCCTCCATGTAGAAAGATAAAACT 58.279 36.000 0.00 0.00 0.00 2.66
92 93 7.420800 CATGCCTCCATGTAGAAAGATAAAAC 58.579 38.462 0.00 0.00 43.07 2.43
93 94 7.572523 CATGCCTCCATGTAGAAAGATAAAA 57.427 36.000 0.00 0.00 43.07 1.52
106 107 5.483751 ACAACAATGTGCATGCCTCCATG 62.484 47.826 16.68 10.34 41.11 3.66
107 108 1.206132 CAACAATGTGCATGCCTCCAT 59.794 47.619 16.68 11.73 0.00 3.41
108 109 0.604073 CAACAATGTGCATGCCTCCA 59.396 50.000 16.68 9.76 0.00 3.86
109 110 0.604578 ACAACAATGTGCATGCCTCC 59.395 50.000 16.68 3.55 38.69 4.30
110 111 2.443887 AACAACAATGTGCATGCCTC 57.556 45.000 16.68 9.13 40.46 4.70
111 112 2.914695 AAACAACAATGTGCATGCCT 57.085 40.000 16.68 0.00 40.46 4.75
112 113 5.007528 AGTTTTAAACAACAATGTGCATGCC 59.992 36.000 16.68 7.25 40.46 4.40
113 114 6.046885 AGTTTTAAACAACAATGTGCATGC 57.953 33.333 11.82 11.82 40.46 4.06
114 115 7.741216 GCATAGTTTTAAACAACAATGTGCATG 59.259 33.333 10.60 0.00 40.46 4.06
115 116 7.440556 TGCATAGTTTTAAACAACAATGTGCAT 59.559 29.630 10.60 0.00 40.46 3.96
116 117 6.758416 TGCATAGTTTTAAACAACAATGTGCA 59.242 30.769 10.60 11.39 40.46 4.57
117 118 7.171447 TGCATAGTTTTAAACAACAATGTGC 57.829 32.000 10.60 9.15 40.46 4.57
118 119 9.419737 GTTTGCATAGTTTTAAACAACAATGTG 57.580 29.630 10.60 0.00 40.46 3.21
119 120 9.377312 AGTTTGCATAGTTTTAAACAACAATGT 57.623 25.926 10.60 0.00 43.14 2.71
123 124 9.209175 ACAAAGTTTGCATAGTTTTAAACAACA 57.791 25.926 15.59 0.00 35.93 3.33
138 139 9.518906 CATGCAGATATAATTACAAAGTTTGCA 57.481 29.630 15.59 4.09 40.40 4.08
139 140 8.482429 GCATGCAGATATAATTACAAAGTTTGC 58.518 33.333 14.21 0.00 0.00 3.68
140 141 8.971321 GGCATGCAGATATAATTACAAAGTTTG 58.029 33.333 21.36 14.13 0.00 2.93
141 142 8.917088 AGGCATGCAGATATAATTACAAAGTTT 58.083 29.630 21.36 0.00 0.00 2.66
142 143 8.355169 CAGGCATGCAGATATAATTACAAAGTT 58.645 33.333 21.36 0.00 0.00 2.66
143 144 7.040201 CCAGGCATGCAGATATAATTACAAAGT 60.040 37.037 21.36 0.00 0.00 2.66
144 145 7.175467 TCCAGGCATGCAGATATAATTACAAAG 59.825 37.037 21.36 0.00 0.00 2.77
145 146 7.003482 TCCAGGCATGCAGATATAATTACAAA 58.997 34.615 21.36 0.00 0.00 2.83
146 147 6.541907 TCCAGGCATGCAGATATAATTACAA 58.458 36.000 21.36 0.00 0.00 2.41
147 148 6.013466 TCTCCAGGCATGCAGATATAATTACA 60.013 38.462 21.36 0.00 0.00 2.41
148 149 6.409704 TCTCCAGGCATGCAGATATAATTAC 58.590 40.000 21.36 0.00 0.00 1.89
149 150 6.625532 TCTCCAGGCATGCAGATATAATTA 57.374 37.500 21.36 0.00 0.00 1.40
150 151 5.509832 TCTCCAGGCATGCAGATATAATT 57.490 39.130 21.36 0.00 0.00 1.40
151 152 5.712084 ATCTCCAGGCATGCAGATATAAT 57.288 39.130 21.36 1.41 0.00 1.28
152 153 5.221986 ACAATCTCCAGGCATGCAGATATAA 60.222 40.000 21.36 0.00 0.00 0.98
153 154 4.287845 ACAATCTCCAGGCATGCAGATATA 59.712 41.667 21.36 0.34 0.00 0.86
154 155 3.074094 ACAATCTCCAGGCATGCAGATAT 59.926 43.478 21.36 8.19 0.00 1.63
155 156 2.440627 ACAATCTCCAGGCATGCAGATA 59.559 45.455 21.36 6.11 0.00 1.98
156 157 1.214673 ACAATCTCCAGGCATGCAGAT 59.785 47.619 21.36 15.69 0.00 2.90
157 158 0.622136 ACAATCTCCAGGCATGCAGA 59.378 50.000 21.36 13.96 0.00 4.26
158 159 1.471119 AACAATCTCCAGGCATGCAG 58.529 50.000 21.36 11.29 0.00 4.41
159 160 1.546923 CAAACAATCTCCAGGCATGCA 59.453 47.619 21.36 0.00 0.00 3.96
160 161 1.547372 ACAAACAATCTCCAGGCATGC 59.453 47.619 9.90 9.90 0.00 4.06
161 162 4.012374 AGTACAAACAATCTCCAGGCATG 58.988 43.478 0.00 0.00 0.00 4.06
162 163 4.307032 AGTACAAACAATCTCCAGGCAT 57.693 40.909 0.00 0.00 0.00 4.40
163 164 3.788227 AGTACAAACAATCTCCAGGCA 57.212 42.857 0.00 0.00 0.00 4.75
164 165 6.759497 ATTAAGTACAAACAATCTCCAGGC 57.241 37.500 0.00 0.00 0.00 4.85
166 167 9.774742 GCTAAATTAAGTACAAACAATCTCCAG 57.225 33.333 0.00 0.00 0.00 3.86
167 168 9.290988 TGCTAAATTAAGTACAAACAATCTCCA 57.709 29.630 0.00 0.00 0.00 3.86
168 169 9.774742 CTGCTAAATTAAGTACAAACAATCTCC 57.225 33.333 0.00 0.00 0.00 3.71
215 216 9.476202 CACTGAATCAGGACATACGATAAAATA 57.524 33.333 15.38 0.00 35.51 1.40
216 217 7.987458 ACACTGAATCAGGACATACGATAAAAT 59.013 33.333 15.38 0.00 35.51 1.82
217 218 7.327975 ACACTGAATCAGGACATACGATAAAA 58.672 34.615 15.38 0.00 35.51 1.52
218 219 6.873997 ACACTGAATCAGGACATACGATAAA 58.126 36.000 15.38 0.00 35.51 1.40
219 220 6.465439 ACACTGAATCAGGACATACGATAA 57.535 37.500 15.38 0.00 35.51 1.75
220 221 6.465439 AACACTGAATCAGGACATACGATA 57.535 37.500 15.38 0.00 35.51 2.92
221 222 5.344743 AACACTGAATCAGGACATACGAT 57.655 39.130 15.38 0.00 35.51 3.73
222 223 4.801330 AACACTGAATCAGGACATACGA 57.199 40.909 15.38 0.00 35.51 3.43
223 224 4.436050 GCAAACACTGAATCAGGACATACG 60.436 45.833 15.38 0.00 35.51 3.06
224 225 4.455533 TGCAAACACTGAATCAGGACATAC 59.544 41.667 15.38 0.82 35.51 2.39
225 226 4.455533 GTGCAAACACTGAATCAGGACATA 59.544 41.667 15.38 0.00 43.85 2.29
226 227 3.254166 GTGCAAACACTGAATCAGGACAT 59.746 43.478 15.38 0.00 43.85 3.06
227 228 2.618241 GTGCAAACACTGAATCAGGACA 59.382 45.455 15.38 0.68 43.85 4.02
228 229 3.273919 GTGCAAACACTGAATCAGGAC 57.726 47.619 15.38 0.00 43.85 3.85
253 254 6.988109 GCAAGATGCAAAGATGATGTAATC 57.012 37.500 0.00 0.00 44.26 1.75
286 287 1.064906 CATCTCTCCACCAGCCAACAT 60.065 52.381 0.00 0.00 0.00 2.71
292 293 2.763448 AGAAGTACATCTCTCCACCAGC 59.237 50.000 0.00 0.00 0.00 4.85
295 296 5.594725 TGTATCAGAAGTACATCTCTCCACC 59.405 44.000 0.00 0.00 0.00 4.61
301 302 5.233988 GGGCATGTATCAGAAGTACATCTC 58.766 45.833 0.00 0.00 39.95 2.75
306 307 4.130118 CAAGGGGCATGTATCAGAAGTAC 58.870 47.826 0.00 0.00 0.00 2.73
339 340 7.534723 AACACTAACTGATTACACCTACTCA 57.465 36.000 0.00 0.00 0.00 3.41
344 345 9.010029 CCAAATTAACACTAACTGATTACACCT 57.990 33.333 0.00 0.00 0.00 4.00
358 359 8.974060 TGAGACTAAACTTCCAAATTAACACT 57.026 30.769 0.00 0.00 0.00 3.55
381 382 6.839124 ATATGGCAAACTTCAAGTCAATGA 57.161 33.333 0.00 0.00 0.00 2.57
382 383 8.246180 ACTTATATGGCAAACTTCAAGTCAATG 58.754 33.333 0.00 0.00 0.00 2.82
387 388 5.711976 AGCACTTATATGGCAAACTTCAAGT 59.288 36.000 0.00 0.00 0.00 3.16
406 407 7.273381 GCGAAATGAACATTTATAAACAGCACT 59.727 33.333 11.89 0.00 40.77 4.40
430 431 2.704725 ACACAACCAAATAAGCAGCG 57.295 45.000 0.00 0.00 0.00 5.18
437 438 8.380099 AGGATACACTTCTTACACAACCAAATA 58.620 33.333 0.00 0.00 41.41 1.40
460 461 2.775911 CATCACTGCAGAAAGGAGGA 57.224 50.000 23.35 6.20 40.51 3.71
492 493 4.220533 GCAGCAGCTAAATAGACATTGG 57.779 45.455 0.00 0.00 37.91 3.16
513 514 4.136517 GCAAAATGCACAACCAAATCAG 57.863 40.909 0.00 0.00 44.26 2.90
527 528 6.017400 TGAAGAAAGGAAGCTAGCAAAATG 57.983 37.500 18.83 0.00 0.00 2.32
533 534 5.675827 GCATCTTTGAAGAAAGGAAGCTAGC 60.676 44.000 6.62 6.62 39.36 3.42
552 553 1.280133 TGCTGGCTGAACTAAGCATCT 59.720 47.619 0.00 0.00 45.43 2.90
562 563 0.819259 GACACAGGTTGCTGGCTGAA 60.819 55.000 0.00 0.00 0.00 3.02
779 784 3.849574 TCCAACTGATCCCAAATAGACCA 59.150 43.478 0.00 0.00 0.00 4.02
919 924 3.274095 AGCTGCAGGGAGATTACTTTC 57.726 47.619 17.12 0.00 0.00 2.62
925 930 3.495806 GCAATAGTAGCTGCAGGGAGATT 60.496 47.826 17.12 0.00 38.48 2.40
992 1012 1.022982 TTGCAGCGCCATCTTGAGAG 61.023 55.000 2.29 0.00 0.00 3.20
1267 1287 6.309712 CTTCTTGATGAAGTTCTCAAGCAA 57.690 37.500 25.02 20.51 45.12 3.91
1737 1784 1.277842 TGTTCCTCCATGCGCTTTCTA 59.722 47.619 9.73 0.00 0.00 2.10
1806 1853 2.739379 GGCCTGTTTCTTCTTCTTCTCG 59.261 50.000 0.00 0.00 0.00 4.04
1872 1928 3.806949 TTCTGCTTACCATTGGAGGTT 57.193 42.857 10.37 0.00 43.08 3.50
2014 2073 2.158505 CCTCAAAGAGGGCATCCATCAT 60.159 50.000 5.13 0.00 45.43 2.45
2148 2207 4.617520 TTGCCGCAGAACGCCTCA 62.618 61.111 0.00 0.00 41.76 3.86
2526 2655 9.459640 TCATATATAACTAGTCTTCAACGCAAC 57.540 33.333 0.00 0.00 0.00 4.17
2573 2703 4.394300 GTCAGCCAAGGCAGCATATATAAG 59.606 45.833 14.40 0.00 44.88 1.73
2628 2758 2.031683 CGGACACCTCAAACACAACTTC 59.968 50.000 0.00 0.00 0.00 3.01
2634 2764 1.878953 ATGACGGACACCTCAAACAC 58.121 50.000 0.00 0.00 0.00 3.32
2635 2765 2.217750 CAATGACGGACACCTCAAACA 58.782 47.619 0.00 0.00 0.00 2.83
2636 2766 2.218603 ACAATGACGGACACCTCAAAC 58.781 47.619 0.00 0.00 0.00 2.93
2637 2767 2.489971 GACAATGACGGACACCTCAAA 58.510 47.619 0.00 0.00 0.00 2.69
2638 2768 1.604438 CGACAATGACGGACACCTCAA 60.604 52.381 0.00 0.00 0.00 3.02
2639 2769 0.038618 CGACAATGACGGACACCTCA 60.039 55.000 0.00 0.00 0.00 3.86
2640 2770 0.038526 ACGACAATGACGGACACCTC 60.039 55.000 10.02 0.00 34.93 3.85
2641 2771 0.319555 CACGACAATGACGGACACCT 60.320 55.000 10.02 0.00 34.93 4.00
2666 2804 6.454795 ACAAACATTGCTCCGTTTCAAATAT 58.545 32.000 0.00 0.00 33.14 1.28
2694 2832 7.297936 AGGAAAAAGGTCGGATACAATTTTT 57.702 32.000 0.00 0.00 33.78 1.94
2695 2833 6.911250 AGGAAAAAGGTCGGATACAATTTT 57.089 33.333 0.00 0.00 0.00 1.82
2696 2834 7.173032 AGTAGGAAAAAGGTCGGATACAATTT 58.827 34.615 0.00 0.00 0.00 1.82
2697 2835 6.718294 AGTAGGAAAAAGGTCGGATACAATT 58.282 36.000 0.00 0.00 0.00 2.32
2698 2836 6.309389 AGTAGGAAAAAGGTCGGATACAAT 57.691 37.500 0.00 0.00 0.00 2.71
2701 2839 4.442612 GGGAGTAGGAAAAAGGTCGGATAC 60.443 50.000 0.00 0.00 0.00 2.24
2703 2841 2.504585 GGGAGTAGGAAAAAGGTCGGAT 59.495 50.000 0.00 0.00 0.00 4.18
2705 2843 1.907255 AGGGAGTAGGAAAAAGGTCGG 59.093 52.381 0.00 0.00 0.00 4.79
2706 2844 3.697619 AAGGGAGTAGGAAAAAGGTCG 57.302 47.619 0.00 0.00 0.00 4.79
2707 2845 4.726583 ACAAAGGGAGTAGGAAAAAGGTC 58.273 43.478 0.00 0.00 0.00 3.85
2709 2847 5.596772 TGAAACAAAGGGAGTAGGAAAAAGG 59.403 40.000 0.00 0.00 0.00 3.11
2710 2848 6.504398 GTGAAACAAAGGGAGTAGGAAAAAG 58.496 40.000 0.00 0.00 36.32 2.27
2711 2849 6.459670 GTGAAACAAAGGGAGTAGGAAAAA 57.540 37.500 0.00 0.00 36.32 1.94
2735 2873 4.024048 CGAAAGTTCAGGCACAACTACATT 60.024 41.667 1.93 0.00 32.71 2.71
2736 2874 3.498397 CGAAAGTTCAGGCACAACTACAT 59.502 43.478 1.93 0.00 32.71 2.29
2737 2875 2.869801 CGAAAGTTCAGGCACAACTACA 59.130 45.455 1.93 0.00 32.71 2.74
2738 2876 3.128349 TCGAAAGTTCAGGCACAACTAC 58.872 45.455 1.93 0.49 32.71 2.73
2739 2877 3.069016 TCTCGAAAGTTCAGGCACAACTA 59.931 43.478 1.93 0.00 32.71 2.24
2740 2878 2.158957 TCTCGAAAGTTCAGGCACAACT 60.159 45.455 0.00 0.00 35.51 3.16
2741 2879 2.210116 TCTCGAAAGTTCAGGCACAAC 58.790 47.619 0.00 0.00 0.00 3.32
2742 2880 2.613026 TCTCGAAAGTTCAGGCACAA 57.387 45.000 0.00 0.00 0.00 3.33
2743 2881 2.300152 AGATCTCGAAAGTTCAGGCACA 59.700 45.455 0.00 0.00 0.00 4.57
2744 2882 2.966050 AGATCTCGAAAGTTCAGGCAC 58.034 47.619 0.00 0.00 0.00 5.01
2745 2883 4.801330 TTAGATCTCGAAAGTTCAGGCA 57.199 40.909 0.00 0.00 0.00 4.75
2746 2884 6.670077 AATTTAGATCTCGAAAGTTCAGGC 57.330 37.500 0.00 0.00 0.00 4.85
2747 2885 8.256611 TCAAATTTAGATCTCGAAAGTTCAGG 57.743 34.615 0.00 0.00 29.13 3.86
2748 2886 9.913451 GATCAAATTTAGATCTCGAAAGTTCAG 57.087 33.333 16.74 0.00 39.01 3.02
2749 2887 9.435688 TGATCAAATTTAGATCTCGAAAGTTCA 57.564 29.630 21.04 0.00 41.85 3.18
2768 2906 9.381033 CAGGCATTGGTTAAATTTATGATCAAA 57.619 29.630 0.00 0.00 0.00 2.69
2769 2907 8.538701 ACAGGCATTGGTTAAATTTATGATCAA 58.461 29.630 0.00 0.00 0.00 2.57
2770 2908 8.076910 ACAGGCATTGGTTAAATTTATGATCA 57.923 30.769 0.00 0.00 0.00 2.92
2771 2909 9.463443 GTACAGGCATTGGTTAAATTTATGATC 57.537 33.333 0.00 0.00 0.00 2.92
2772 2910 9.200817 AGTACAGGCATTGGTTAAATTTATGAT 57.799 29.630 0.00 0.00 0.00 2.45
2773 2911 8.588290 AGTACAGGCATTGGTTAAATTTATGA 57.412 30.769 0.00 0.00 0.00 2.15
2774 2912 9.651913 AAAGTACAGGCATTGGTTAAATTTATG 57.348 29.630 0.00 0.00 0.00 1.90
2775 2913 9.869757 GAAAGTACAGGCATTGGTTAAATTTAT 57.130 29.630 0.00 0.00 0.00 1.40
2776 2914 8.024285 CGAAAGTACAGGCATTGGTTAAATTTA 58.976 33.333 0.00 0.00 0.00 1.40
2777 2915 6.866248 CGAAAGTACAGGCATTGGTTAAATTT 59.134 34.615 0.00 0.00 0.00 1.82
2778 2916 6.207810 TCGAAAGTACAGGCATTGGTTAAATT 59.792 34.615 0.00 0.00 0.00 1.82
2779 2917 5.708230 TCGAAAGTACAGGCATTGGTTAAAT 59.292 36.000 0.00 0.00 0.00 1.40
2780 2918 5.064558 TCGAAAGTACAGGCATTGGTTAAA 58.935 37.500 0.00 0.00 0.00 1.52
2781 2919 4.643463 TCGAAAGTACAGGCATTGGTTAA 58.357 39.130 0.00 0.00 0.00 2.01
2782 2920 4.020928 TCTCGAAAGTACAGGCATTGGTTA 60.021 41.667 0.00 0.00 0.00 2.85
2783 2921 3.074412 CTCGAAAGTACAGGCATTGGTT 58.926 45.455 0.00 0.00 0.00 3.67
2784 2922 2.301870 TCTCGAAAGTACAGGCATTGGT 59.698 45.455 0.00 0.00 0.00 3.67
2785 2923 2.972625 TCTCGAAAGTACAGGCATTGG 58.027 47.619 0.00 0.00 0.00 3.16
2786 2924 4.437239 AGATCTCGAAAGTACAGGCATTG 58.563 43.478 0.00 0.00 0.00 2.82
2787 2925 4.744795 AGATCTCGAAAGTACAGGCATT 57.255 40.909 0.00 0.00 0.00 3.56
2788 2926 5.854010 TTAGATCTCGAAAGTACAGGCAT 57.146 39.130 0.00 0.00 0.00 4.40
2789 2927 5.654603 TTTAGATCTCGAAAGTACAGGCA 57.345 39.130 0.00 0.00 0.00 4.75
2790 2928 7.277981 TCAAATTTAGATCTCGAAAGTACAGGC 59.722 37.037 0.00 0.00 0.00 4.85
2791 2929 8.703604 TCAAATTTAGATCTCGAAAGTACAGG 57.296 34.615 0.00 0.00 0.00 4.00
2793 2931 9.869757 TGATCAAATTTAGATCTCGAAAGTACA 57.130 29.630 21.04 0.00 41.85 2.90
2830 2968 1.707239 TTGCGCCGTCAAACTCGTTT 61.707 50.000 4.18 0.00 0.00 3.60
2831 2969 2.101209 CTTGCGCCGTCAAACTCGTT 62.101 55.000 4.18 0.00 0.00 3.85
2832 2970 2.586635 TTGCGCCGTCAAACTCGT 60.587 55.556 4.18 0.00 0.00 4.18
2833 2971 1.827315 TTCTTGCGCCGTCAAACTCG 61.827 55.000 4.18 0.00 0.00 4.18
2834 2972 0.306533 TTTCTTGCGCCGTCAAACTC 59.693 50.000 4.18 0.00 0.00 3.01
2835 2973 0.307760 CTTTCTTGCGCCGTCAAACT 59.692 50.000 4.18 0.00 0.00 2.66
2836 2974 1.268778 GCTTTCTTGCGCCGTCAAAC 61.269 55.000 4.18 0.00 0.00 2.93
2837 2975 1.008995 GCTTTCTTGCGCCGTCAAA 60.009 52.632 4.18 0.00 0.00 2.69
2838 2976 2.637025 GCTTTCTTGCGCCGTCAA 59.363 55.556 4.18 0.00 0.00 3.18
2856 2994 1.798223 TCAACAATGTAGTGCGCTCAC 59.202 47.619 9.73 0.00 43.44 3.51
2857 2995 2.162319 TCAACAATGTAGTGCGCTCA 57.838 45.000 9.73 2.11 0.00 4.26
2858 2996 3.419915 CATTCAACAATGTAGTGCGCTC 58.580 45.455 9.73 4.74 35.53 5.03
2859 2997 2.162208 CCATTCAACAATGTAGTGCGCT 59.838 45.455 9.73 4.58 38.22 5.92
2860 2998 2.161410 TCCATTCAACAATGTAGTGCGC 59.839 45.455 0.00 0.00 38.22 6.09
2861 2999 3.684305 TCTCCATTCAACAATGTAGTGCG 59.316 43.478 0.00 0.00 38.22 5.34
2862 3000 4.937620 TCTCTCCATTCAACAATGTAGTGC 59.062 41.667 0.00 0.00 38.22 4.40
2863 3001 6.169094 ACTCTCTCCATTCAACAATGTAGTG 58.831 40.000 0.00 0.00 38.22 2.74
2864 3002 6.365970 ACTCTCTCCATTCAACAATGTAGT 57.634 37.500 0.00 0.00 38.22 2.73
2865 3003 8.200120 TGATACTCTCTCCATTCAACAATGTAG 58.800 37.037 0.00 0.00 38.22 2.74
2866 3004 8.078060 TGATACTCTCTCCATTCAACAATGTA 57.922 34.615 0.00 0.00 38.22 2.29
2867 3005 6.950842 TGATACTCTCTCCATTCAACAATGT 58.049 36.000 0.00 0.00 38.22 2.71
2868 3006 8.343366 CAATGATACTCTCTCCATTCAACAATG 58.657 37.037 0.00 0.00 39.45 2.82
2869 3007 8.051535 ACAATGATACTCTCTCCATTCAACAAT 58.948 33.333 0.00 0.00 0.00 2.71
2870 3008 7.397221 ACAATGATACTCTCTCCATTCAACAA 58.603 34.615 0.00 0.00 0.00 2.83
2871 3009 6.950842 ACAATGATACTCTCTCCATTCAACA 58.049 36.000 0.00 0.00 0.00 3.33
2872 3010 8.200792 ACTACAATGATACTCTCTCCATTCAAC 58.799 37.037 0.00 0.00 0.00 3.18
2873 3011 8.311395 ACTACAATGATACTCTCTCCATTCAA 57.689 34.615 0.00 0.00 0.00 2.69
2874 3012 7.014711 GGACTACAATGATACTCTCTCCATTCA 59.985 40.741 0.00 0.00 0.00 2.57
2875 3013 7.232534 AGGACTACAATGATACTCTCTCCATTC 59.767 40.741 0.00 0.00 0.00 2.67
2876 3014 7.072562 AGGACTACAATGATACTCTCTCCATT 58.927 38.462 0.00 0.00 0.00 3.16
2877 3015 6.619464 AGGACTACAATGATACTCTCTCCAT 58.381 40.000 0.00 0.00 0.00 3.41
2878 3016 6.019656 AGGACTACAATGATACTCTCTCCA 57.980 41.667 0.00 0.00 0.00 3.86
2879 3017 6.239176 CCAAGGACTACAATGATACTCTCTCC 60.239 46.154 0.00 0.00 0.00 3.71
2880 3018 6.322712 ACCAAGGACTACAATGATACTCTCTC 59.677 42.308 0.00 0.00 0.00 3.20
2881 3019 6.198639 ACCAAGGACTACAATGATACTCTCT 58.801 40.000 0.00 0.00 0.00 3.10
2882 3020 6.472686 ACCAAGGACTACAATGATACTCTC 57.527 41.667 0.00 0.00 0.00 3.20
2883 3021 9.830186 ATATACCAAGGACTACAATGATACTCT 57.170 33.333 0.00 0.00 0.00 3.24
2889 3027 8.148351 GCAGTTATATACCAAGGACTACAATGA 58.852 37.037 0.00 0.00 0.00 2.57
2890 3028 7.387948 GGCAGTTATATACCAAGGACTACAATG 59.612 40.741 0.00 0.00 0.00 2.82
2891 3029 7.292591 AGGCAGTTATATACCAAGGACTACAAT 59.707 37.037 0.00 0.00 0.00 2.71
2892 3030 6.614087 AGGCAGTTATATACCAAGGACTACAA 59.386 38.462 0.00 0.00 0.00 2.41
2893 3031 6.141083 AGGCAGTTATATACCAAGGACTACA 58.859 40.000 0.00 0.00 0.00 2.74
2894 3032 6.667558 AGGCAGTTATATACCAAGGACTAC 57.332 41.667 0.00 0.00 0.00 2.73
2895 3033 6.723052 GGTAGGCAGTTATATACCAAGGACTA 59.277 42.308 0.00 0.00 38.05 2.59
2896 3034 5.543020 GGTAGGCAGTTATATACCAAGGACT 59.457 44.000 0.00 0.00 38.05 3.85
2897 3035 5.279859 GGGTAGGCAGTTATATACCAAGGAC 60.280 48.000 0.00 0.00 39.59 3.85
2898 3036 4.842380 GGGTAGGCAGTTATATACCAAGGA 59.158 45.833 0.00 0.00 39.59 3.36
2899 3037 4.844655 AGGGTAGGCAGTTATATACCAAGG 59.155 45.833 2.93 0.00 39.59 3.61
2900 3038 6.270231 AGAAGGGTAGGCAGTTATATACCAAG 59.730 42.308 2.93 0.00 39.59 3.61
2901 3039 6.042781 CAGAAGGGTAGGCAGTTATATACCAA 59.957 42.308 2.93 0.00 39.59 3.67
2902 3040 5.542635 CAGAAGGGTAGGCAGTTATATACCA 59.457 44.000 2.93 0.00 39.59 3.25
2921 3059 5.217895 GGTTTAATACCGAGCAACAGAAG 57.782 43.478 0.00 0.00 37.12 2.85
2948 3277 3.000727 CCTACCGCTAAAGACCTTTGTG 58.999 50.000 5.34 2.98 34.23 3.33
2949 3278 2.027469 CCCTACCGCTAAAGACCTTTGT 60.027 50.000 5.34 0.00 34.23 2.83
2950 3279 2.629051 CCCTACCGCTAAAGACCTTTG 58.371 52.381 5.34 0.00 34.23 2.77
2958 3287 1.870064 AGTAAGCCCCTACCGCTAAA 58.130 50.000 0.00 0.00 34.84 1.85
2959 3288 1.870064 AAGTAAGCCCCTACCGCTAA 58.130 50.000 0.00 0.00 34.84 3.09
2961 3290 1.870064 TAAAGTAAGCCCCTACCGCT 58.130 50.000 0.00 0.00 38.53 5.52
3033 3381 9.845740 TTACTGTGTGGTGCTATTTATATTCAT 57.154 29.630 0.00 0.00 0.00 2.57
3047 3395 6.037720 TGTTCAAGTTATGTTACTGTGTGGTG 59.962 38.462 0.00 0.00 0.00 4.17
3048 3396 6.116806 TGTTCAAGTTATGTTACTGTGTGGT 58.883 36.000 0.00 0.00 0.00 4.16
3049 3397 6.612247 TGTTCAAGTTATGTTACTGTGTGG 57.388 37.500 0.00 0.00 0.00 4.17
3083 3431 9.729281 TGCATGTTATGATGTGTGATATTATCT 57.271 29.630 5.33 0.00 0.00 1.98
3086 3434 9.504708 TGATGCATGTTATGATGTGTGATATTA 57.495 29.630 2.46 0.00 0.00 0.98
3087 3435 8.294577 GTGATGCATGTTATGATGTGTGATATT 58.705 33.333 2.46 0.00 0.00 1.28
3088 3436 7.094506 GGTGATGCATGTTATGATGTGTGATAT 60.095 37.037 2.46 0.00 0.00 1.63
3101 3449 5.830799 ATATCTCTGGGTGATGCATGTTA 57.169 39.130 2.46 0.00 0.00 2.41
3104 3452 5.417754 ACTATATCTCTGGGTGATGCATG 57.582 43.478 2.46 0.00 0.00 4.06
3114 3462 6.015095 TGTGCTACATTGGACTATATCTCTGG 60.015 42.308 0.00 0.00 0.00 3.86
3117 3465 8.744652 ACTATGTGCTACATTGGACTATATCTC 58.255 37.037 7.02 0.00 39.88 2.75
3119 3467 9.712305 AAACTATGTGCTACATTGGACTATATC 57.288 33.333 7.02 0.00 39.88 1.63
3123 3471 8.315482 TGTAAAACTATGTGCTACATTGGACTA 58.685 33.333 7.02 0.00 39.88 2.59
3125 3473 7.372451 TGTAAAACTATGTGCTACATTGGAC 57.628 36.000 7.02 4.75 39.88 4.02
3126 3474 9.845740 ATATGTAAAACTATGTGCTACATTGGA 57.154 29.630 7.02 0.00 39.88 3.53
3179 3527 9.443283 GCTATGTTGAACTATTTGCTATCTTTG 57.557 33.333 0.00 0.00 0.00 2.77
3180 3528 8.624776 GGCTATGTTGAACTATTTGCTATCTTT 58.375 33.333 0.00 0.00 0.00 2.52
3181 3529 7.775093 TGGCTATGTTGAACTATTTGCTATCTT 59.225 33.333 0.00 0.00 0.00 2.40
3182 3530 7.282585 TGGCTATGTTGAACTATTTGCTATCT 58.717 34.615 0.00 0.00 0.00 1.98
3183 3531 7.496529 TGGCTATGTTGAACTATTTGCTATC 57.503 36.000 0.00 0.00 0.00 2.08
3184 3532 7.339212 TGTTGGCTATGTTGAACTATTTGCTAT 59.661 33.333 0.00 0.00 0.00 2.97
3235 3583 8.726068 TCTCTTCTAGTATTCGAGCATATTGAG 58.274 37.037 0.00 0.00 0.00 3.02
3238 3586 9.073475 ACTTCTCTTCTAGTATTCGAGCATATT 57.927 33.333 0.00 0.00 0.00 1.28
3240 3588 9.557061 TTACTTCTCTTCTAGTATTCGAGCATA 57.443 33.333 0.00 0.00 0.00 3.14
3241 3589 6.952773 ACTTCTCTTCTAGTATTCGAGCAT 57.047 37.500 0.00 0.00 0.00 3.79
3245 3593 8.881743 GTCACTTACTTCTCTTCTAGTATTCGA 58.118 37.037 0.00 0.00 0.00 3.71
3246 3594 8.124199 GGTCACTTACTTCTCTTCTAGTATTCG 58.876 40.741 0.00 0.00 0.00 3.34
3259 3607 1.899814 TGGCGATGGTCACTTACTTCT 59.100 47.619 0.00 0.00 0.00 2.85
3277 3625 3.606595 TGAGCAAGATGAGAGAAGTGG 57.393 47.619 0.00 0.00 0.00 4.00
3284 3632 2.674852 GCGAATGTTGAGCAAGATGAGA 59.325 45.455 0.00 0.00 0.00 3.27
3292 3640 1.806542 GGAAGAAGCGAATGTTGAGCA 59.193 47.619 0.00 0.00 0.00 4.26
3300 3648 4.080638 AGGAAAGATGAGGAAGAAGCGAAT 60.081 41.667 0.00 0.00 0.00 3.34
3302 3650 2.834549 AGGAAAGATGAGGAAGAAGCGA 59.165 45.455 0.00 0.00 0.00 4.93
3320 3668 1.279496 CCATGTTGAGGAGACCAGGA 58.721 55.000 0.00 0.00 0.00 3.86
3323 3671 0.770499 TTGCCATGTTGAGGAGACCA 59.230 50.000 0.00 0.00 0.00 4.02
3326 3674 1.699083 TGACTTGCCATGTTGAGGAGA 59.301 47.619 0.00 0.00 0.00 3.71
3329 3677 1.069022 CGTTGACTTGCCATGTTGAGG 60.069 52.381 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.