Multiple sequence alignment - TraesCS6D01G107700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G107700 chr6D 100.000 3835 0 0 4870 8704 71524765 71528599 0.000000e+00 7083.0
1 TraesCS6D01G107700 chr6D 100.000 3488 0 0 1 3488 71519896 71523383 0.000000e+00 6442.0
2 TraesCS6D01G107700 chr6D 100.000 806 0 0 3812 4617 71523707 71524512 0.000000e+00 1489.0
3 TraesCS6D01G107700 chr6A 94.143 2800 92 35 5637 8406 88069464 88072221 0.000000e+00 4196.0
4 TraesCS6D01G107700 chr6A 96.576 1811 33 7 703 2512 88063879 88065661 0.000000e+00 2974.0
5 TraesCS6D01G107700 chr6A 96.264 910 21 3 2583 3483 88065658 88066563 0.000000e+00 1480.0
6 TraesCS6D01G107700 chr6A 91.744 860 22 8 4870 5681 88068603 88069461 0.000000e+00 1149.0
7 TraesCS6D01G107700 chr6A 94.908 707 33 1 1 704 88063119 88063825 0.000000e+00 1103.0
8 TraesCS6D01G107700 chr6A 99.154 473 2 2 3843 4314 88066905 88067376 0.000000e+00 850.0
9 TraesCS6D01G107700 chr6A 98.718 312 4 0 4306 4617 88067701 88068012 9.870000e-154 555.0
10 TraesCS6D01G107700 chr6A 93.814 97 5 1 8609 8704 178967574 178967670 2.530000e-30 145.0
11 TraesCS6D01G107700 chr6A 93.814 97 5 1 8609 8704 467255385 467255481 2.530000e-30 145.0
12 TraesCS6D01G107700 chr6A 83.051 118 7 7 2504 2619 554462877 554462983 2.590000e-15 95.3
13 TraesCS6D01G107700 chr6B 92.958 2400 82 17 5637 8028 146143490 146145810 0.000000e+00 3415.0
14 TraesCS6D01G107700 chr6B 96.101 1821 48 5 703 2512 146138258 146140066 0.000000e+00 2948.0
15 TraesCS6D01G107700 chr6B 95.633 916 30 2 2583 3488 146140063 146140978 0.000000e+00 1461.0
16 TraesCS6D01G107700 chr6B 96.438 786 25 2 3812 4596 146140997 146141780 0.000000e+00 1293.0
17 TraesCS6D01G107700 chr6B 92.162 740 37 7 4962 5681 146142749 146143487 0.000000e+00 1026.0
18 TraesCS6D01G107700 chr6B 89.175 739 42 13 1 704 146136977 146137712 0.000000e+00 887.0
19 TraesCS6D01G107700 chr6B 91.710 386 21 6 325 704 146137824 146138204 7.740000e-145 525.0
20 TraesCS6D01G107700 chr3B 93.043 115 7 1 8490 8604 310907128 310907015 5.400000e-37 167.0
21 TraesCS6D01G107700 chr3B 94.805 77 2 1 2508 2582 702846728 702846804 1.530000e-22 119.0
22 TraesCS6D01G107700 chr3B 93.421 76 3 1 2511 2584 702846804 702846729 2.570000e-20 111.0
23 TraesCS6D01G107700 chr7A 96.739 92 3 0 8612 8703 163162520 163162611 4.210000e-33 154.0
24 TraesCS6D01G107700 chrUn 95.699 93 4 0 8612 8704 314867368 314867460 5.440000e-32 150.0
25 TraesCS6D01G107700 chr1A 93.814 97 5 1 8609 8704 89197877 89197973 2.530000e-30 145.0
26 TraesCS6D01G107700 chr1A 93.814 97 5 1 8609 8704 524024752 524024848 2.530000e-30 145.0
27 TraesCS6D01G107700 chr1A 94.681 94 4 1 8612 8704 559317116 559317023 2.530000e-30 145.0
28 TraesCS6D01G107700 chr1A 93.814 97 5 1 8609 8704 567755245 567755341 2.530000e-30 145.0
29 TraesCS6D01G107700 chr1A 93.814 97 5 1 8609 8704 567904726 567904822 2.530000e-30 145.0
30 TraesCS6D01G107700 chr2A 93.827 81 1 2 2509 2585 125206094 125206174 1.530000e-22 119.0
31 TraesCS6D01G107700 chr2A 92.500 80 2 1 2509 2584 125206173 125206094 2.570000e-20 111.0
32 TraesCS6D01G107700 chr1D 83.582 134 12 2 8487 8610 394459614 394459747 5.520000e-22 117.0
33 TraesCS6D01G107700 chr7B 90.361 83 5 3 2505 2586 85782873 85782953 1.200000e-18 106.0
34 TraesCS6D01G107700 chr7B 88.750 80 8 1 2509 2587 624756272 624756351 7.190000e-16 97.1
35 TraesCS6D01G107700 chr2D 89.286 84 2 3 2509 2585 459482677 459482760 2.000000e-16 99.0
36 TraesCS6D01G107700 chr1B 90.789 76 4 1 2509 2584 162082355 162082283 2.000000e-16 99.0
37 TraesCS6D01G107700 chr1B 79.167 96 12 6 8521 8612 386088549 386088458 9.440000e-05 60.2
38 TraesCS6D01G107700 chr5D 87.654 81 8 1 2509 2587 352731625 352731545 9.300000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G107700 chr6D 71519896 71528599 8703 False 5004.666667 7083 100.000000 1 8704 3 chr6D.!!$F1 8703
1 TraesCS6D01G107700 chr6A 88063119 88072221 9102 False 1758.142857 4196 95.929571 1 8406 7 chr6A.!!$F4 8405
2 TraesCS6D01G107700 chr6B 146136977 146145810 8833 False 1650.714286 3415 93.453857 1 8028 7 chr6B.!!$F1 8027

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 332 0.384230 ACGCGCAAATCGTTTGTCTG 60.384 50.000 5.73 0.00 42.56 3.51 F
656 1184 1.759293 CGATACGCTCACGGTCTCGA 61.759 60.000 0.00 0.00 46.04 4.04 F
2524 3131 0.702902 AACTACTCCCTCTGTCCGGA 59.297 55.000 0.00 0.00 0.00 5.14 F
2580 3187 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
2583 3190 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59 F
4952 6568 1.299648 GGGTGTAGTCTGCATGCCA 59.700 57.895 16.68 0.96 0.00 4.92 F
6451 8171 0.535102 ACTCCTTGTGAAACCAGCCG 60.535 55.000 0.00 0.00 34.36 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1269 1853 0.251832 TCCTCCTGACTGGTCCTGTC 60.252 60.000 19.34 19.34 37.07 3.51 R
2561 3168 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 R
4371 5322 1.413118 AAAGCCCCAACCTGTTGAAG 58.587 50.000 11.47 3.68 42.93 3.02 R
4952 6568 4.765339 GCAGACCAGTAAAAACCCTTACAT 59.235 41.667 0.00 0.00 34.75 2.29 R
5051 6672 0.601057 GCGGCCTGTACCAATGTTTT 59.399 50.000 0.00 0.00 0.00 2.43 R
7023 8744 0.396139 TATCGTGTACCCGCCTCCTT 60.396 55.000 0.00 0.00 0.00 3.36 R
8461 10226 0.036388 GGATTGACAGTCCTTGCGGA 60.036 55.000 9.67 0.00 36.83 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
307 332 0.384230 ACGCGCAAATCGTTTGTCTG 60.384 50.000 5.73 0.00 42.56 3.51
319 344 3.135712 TCGTTTGTCTGGCATGGGTATAT 59.864 43.478 0.00 0.00 0.00 0.86
379 412 4.412796 TCCGTAGAGCTGCTACTACTAA 57.587 45.455 23.83 15.23 45.92 2.24
469 502 2.922955 TGTCCCCAATTGATCCCTTGTA 59.077 45.455 7.12 0.00 0.00 2.41
509 542 5.580691 TCTTATTTGTCAGGACACTATTGCG 59.419 40.000 0.77 0.00 41.67 4.85
527 560 2.672874 TGCGTCACTGTAAGATCATTGC 59.327 45.455 0.00 0.00 37.43 3.56
548 581 3.002348 GCCAAAGCTATAGCACCGTTAAG 59.998 47.826 26.07 8.04 45.16 1.85
642 1170 3.496884 TGCTGAACACCTTTTCACGATAC 59.503 43.478 0.00 0.00 32.02 2.24
647 1175 2.288579 ACACCTTTTCACGATACGCTCA 60.289 45.455 0.00 0.00 0.00 4.26
648 1176 2.092211 CACCTTTTCACGATACGCTCAC 59.908 50.000 0.00 0.00 0.00 3.51
656 1184 1.759293 CGATACGCTCACGGTCTCGA 61.759 60.000 0.00 0.00 46.04 4.04
762 1345 3.747193 CTTGCGCCAAGTGTACTAAATG 58.253 45.455 4.18 0.00 36.79 2.32
770 1353 6.019801 CGCCAAGTGTACTAAATGTATGTCTC 60.020 42.308 0.00 0.00 33.23 3.36
874 1458 5.692115 TGTATGGACAGAGCATTTCCTTA 57.308 39.130 0.00 0.00 0.00 2.69
933 1517 6.699242 ATACTCATCATGATGTCCCATTCT 57.301 37.500 30.01 9.62 39.72 2.40
1269 1853 1.400242 GCTGCTACTGGAAAAACTGCG 60.400 52.381 0.00 0.00 0.00 5.18
1434 2018 1.679977 CTGGAATGGGCACAGGTGG 60.680 63.158 0.00 0.00 0.00 4.61
1452 2036 3.281332 GGCACCACTCTCTCTCTCT 57.719 57.895 0.00 0.00 0.00 3.10
1453 2037 1.102978 GGCACCACTCTCTCTCTCTC 58.897 60.000 0.00 0.00 0.00 3.20
1454 2038 1.340991 GGCACCACTCTCTCTCTCTCT 60.341 57.143 0.00 0.00 0.00 3.10
1455 2039 2.017049 GCACCACTCTCTCTCTCTCTC 58.983 57.143 0.00 0.00 0.00 3.20
1456 2040 2.356125 GCACCACTCTCTCTCTCTCTCT 60.356 54.545 0.00 0.00 0.00 3.10
1457 2041 3.535561 CACCACTCTCTCTCTCTCTCTC 58.464 54.545 0.00 0.00 0.00 3.20
1458 2042 3.198635 CACCACTCTCTCTCTCTCTCTCT 59.801 52.174 0.00 0.00 0.00 3.10
1459 2043 3.452627 ACCACTCTCTCTCTCTCTCTCTC 59.547 52.174 0.00 0.00 0.00 3.20
1460 2044 3.708631 CCACTCTCTCTCTCTCTCTCTCT 59.291 52.174 0.00 0.00 0.00 3.10
1461 2045 4.202202 CCACTCTCTCTCTCTCTCTCTCTC 60.202 54.167 0.00 0.00 0.00 3.20
1462 2046 4.648762 CACTCTCTCTCTCTCTCTCTCTCT 59.351 50.000 0.00 0.00 0.00 3.10
1481 2077 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1621 2217 6.183361 ACACAGTTTTAGGCTACTCCAGTTTA 60.183 38.462 0.00 0.00 37.29 2.01
1791 2387 5.048921 GTGGCCATTGATGACTGATCTATTG 60.049 44.000 9.72 0.00 31.55 1.90
2015 2612 4.509230 CACTTTACTCGTGCTGCATATGAT 59.491 41.667 5.27 0.00 0.00 2.45
2260 2866 2.961741 GTGATGCCTCCAGATGAGTCTA 59.038 50.000 0.00 0.00 39.65 2.59
2481 3088 3.328050 CCTCCTCTAGACAAAAGTGGGTT 59.672 47.826 0.00 0.00 0.00 4.11
2483 3090 5.189934 CCTCCTCTAGACAAAAGTGGGTTAT 59.810 44.000 0.00 0.00 0.00 1.89
2518 3125 6.693315 TTTGTTTTCAAACTACTCCCTCTG 57.307 37.500 4.14 0.00 43.72 3.35
2519 3126 5.367945 TGTTTTCAAACTACTCCCTCTGT 57.632 39.130 4.14 0.00 39.59 3.41
2520 3127 5.365619 TGTTTTCAAACTACTCCCTCTGTC 58.634 41.667 4.14 0.00 39.59 3.51
2521 3128 4.618920 TTTCAAACTACTCCCTCTGTCC 57.381 45.455 0.00 0.00 0.00 4.02
2522 3129 2.168496 TCAAACTACTCCCTCTGTCCG 58.832 52.381 0.00 0.00 0.00 4.79
2523 3130 1.204941 CAAACTACTCCCTCTGTCCGG 59.795 57.143 0.00 0.00 0.00 5.14
2524 3131 0.702902 AACTACTCCCTCTGTCCGGA 59.297 55.000 0.00 0.00 0.00 5.14
2525 3132 0.702902 ACTACTCCCTCTGTCCGGAA 59.297 55.000 5.23 0.00 0.00 4.30
2526 3133 1.076677 ACTACTCCCTCTGTCCGGAAA 59.923 52.381 5.23 0.00 0.00 3.13
2527 3134 2.292323 ACTACTCCCTCTGTCCGGAAAT 60.292 50.000 5.23 0.00 0.00 2.17
2528 3135 2.544844 ACTCCCTCTGTCCGGAAATA 57.455 50.000 5.23 0.00 0.00 1.40
2529 3136 2.108970 ACTCCCTCTGTCCGGAAATAC 58.891 52.381 5.23 0.00 0.00 1.89
2530 3137 2.292323 ACTCCCTCTGTCCGGAAATACT 60.292 50.000 5.23 0.00 0.00 2.12
2531 3138 2.766828 CTCCCTCTGTCCGGAAATACTT 59.233 50.000 5.23 0.00 0.00 2.24
2532 3139 2.500098 TCCCTCTGTCCGGAAATACTTG 59.500 50.000 5.23 0.00 0.00 3.16
2533 3140 2.236395 CCCTCTGTCCGGAAATACTTGT 59.764 50.000 5.23 0.00 0.00 3.16
2534 3141 3.522553 CCTCTGTCCGGAAATACTTGTC 58.477 50.000 5.23 0.00 0.00 3.18
2535 3142 3.522553 CTCTGTCCGGAAATACTTGTCC 58.477 50.000 5.23 0.00 0.00 4.02
2536 3143 3.170717 TCTGTCCGGAAATACTTGTCCT 58.829 45.455 5.23 0.00 0.00 3.85
2537 3144 4.346730 TCTGTCCGGAAATACTTGTCCTA 58.653 43.478 5.23 0.00 0.00 2.94
2538 3145 4.401519 TCTGTCCGGAAATACTTGTCCTAG 59.598 45.833 5.23 0.00 0.00 3.02
2539 3146 4.346730 TGTCCGGAAATACTTGTCCTAGA 58.653 43.478 5.23 0.00 0.00 2.43
2540 3147 4.773674 TGTCCGGAAATACTTGTCCTAGAA 59.226 41.667 5.23 0.00 0.00 2.10
2541 3148 5.246656 TGTCCGGAAATACTTGTCCTAGAAA 59.753 40.000 5.23 0.00 0.00 2.52
2542 3149 6.070424 TGTCCGGAAATACTTGTCCTAGAAAT 60.070 38.462 5.23 0.00 0.00 2.17
2543 3150 6.258068 GTCCGGAAATACTTGTCCTAGAAATG 59.742 42.308 5.23 0.00 0.00 2.32
2544 3151 5.527582 CCGGAAATACTTGTCCTAGAAATGG 59.472 44.000 0.00 0.00 0.00 3.16
2545 3152 5.527582 CGGAAATACTTGTCCTAGAAATGGG 59.472 44.000 0.00 0.00 0.00 4.00
2546 3153 6.424032 GGAAATACTTGTCCTAGAAATGGGT 58.576 40.000 0.00 0.00 0.00 4.51
2547 3154 6.542735 GGAAATACTTGTCCTAGAAATGGGTC 59.457 42.308 0.00 0.00 0.00 4.46
2548 3155 5.632034 ATACTTGTCCTAGAAATGGGTCC 57.368 43.478 0.00 0.00 0.00 4.46
2549 3156 3.256704 ACTTGTCCTAGAAATGGGTCCA 58.743 45.455 0.00 0.00 0.00 4.02
2550 3157 3.852578 ACTTGTCCTAGAAATGGGTCCAT 59.147 43.478 0.00 0.00 38.46 3.41
2570 3177 6.346096 TCCATTTCTAGGACAAGTATTTCCG 58.654 40.000 0.00 0.00 36.95 4.30
2571 3178 5.527582 CCATTTCTAGGACAAGTATTTCCGG 59.472 44.000 0.00 0.00 36.95 5.14
2572 3179 6.346096 CATTTCTAGGACAAGTATTTCCGGA 58.654 40.000 0.00 0.00 36.95 5.14
2573 3180 4.996788 TCTAGGACAAGTATTTCCGGAC 57.003 45.455 1.83 0.00 36.95 4.79
2574 3181 2.667473 AGGACAAGTATTTCCGGACG 57.333 50.000 1.83 0.00 36.95 4.79
2575 3182 1.206371 AGGACAAGTATTTCCGGACGG 59.794 52.381 1.83 3.96 36.95 4.79
2576 3183 1.205417 GGACAAGTATTTCCGGACGGA 59.795 52.381 1.83 9.76 43.52 4.69
2577 3184 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2578 3185 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2579 3186 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2580 3187 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2581 3188 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2582 3189 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2583 3190 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2601 3208 5.758784 GGGAGTACTAGGTTGCACATATTTC 59.241 44.000 0.00 0.00 0.00 2.17
2935 3542 5.984926 ACAATTTTCATGTCATGTTGGTGTC 59.015 36.000 12.54 0.00 0.00 3.67
3001 3608 2.025416 TGGACTGATGTAACCATTGGGG 60.025 50.000 7.78 0.00 44.81 4.96
3087 3694 4.433283 GCAATACGCAAAAGCTGTTCAATG 60.433 41.667 0.00 0.00 41.79 2.82
3088 3695 1.490621 ACGCAAAAGCTGTTCAATGC 58.509 45.000 0.00 0.00 0.00 3.56
3265 3882 3.569194 TCTTGTTGCCTGTTTACTCCA 57.431 42.857 0.00 0.00 0.00 3.86
3427 4044 6.833342 AAATTCTGTTTGTGCAAGATGAAC 57.167 33.333 0.00 0.00 0.00 3.18
4273 4891 7.775093 TGAGGTGTATTTTGCTAAGCAGAATAT 59.225 33.333 0.00 0.00 43.73 1.28
4322 5273 6.528537 ACTGCATTTTGAATTAGCCATGTA 57.471 33.333 0.00 0.00 0.00 2.29
4371 5322 4.330074 AGTTACTCATCAGCATTACGTTGC 59.670 41.667 3.99 3.99 43.09 4.17
4952 6568 1.299648 GGGTGTAGTCTGCATGCCA 59.700 57.895 16.68 0.96 0.00 4.92
4997 6614 6.159988 TGCCCAAAAACTGGTATTTTTATCG 58.840 36.000 0.00 0.00 44.76 2.92
5080 6721 1.302383 TACAGGCCGCCGAAATTGTG 61.302 55.000 10.68 1.79 0.00 3.33
5216 6857 1.838112 TTTGTTCTGCTGGCCATAGG 58.162 50.000 5.51 0.00 0.00 2.57
5282 6944 5.380043 AGCATGAACTAAATCCATCGGAAT 58.620 37.500 0.00 0.00 34.34 3.01
5400 7065 5.506317 CGAGATTCCTCATTGGGTTTATTGC 60.506 44.000 0.00 0.00 39.39 3.56
5401 7066 5.271598 AGATTCCTCATTGGGTTTATTGCA 58.728 37.500 0.00 0.00 36.20 4.08
5522 7187 2.346766 TGCTGAAAGTGAGCTTCCAA 57.653 45.000 0.00 0.00 37.35 3.53
5593 7258 8.698973 TTGAAAAGGTGAGTAATGTTGGATTA 57.301 30.769 0.00 0.00 0.00 1.75
5596 7261 9.406828 GAAAAGGTGAGTAATGTTGGATTAAAC 57.593 33.333 0.00 0.00 0.00 2.01
5884 7604 6.375174 TCACTAACCAATGTCTGATCCATTTG 59.625 38.462 0.00 0.00 30.28 2.32
5926 7646 3.981071 AATACAAGGTGTGCTGCTCTA 57.019 42.857 0.00 0.00 0.00 2.43
6012 7732 2.889045 AGCATGTGTTTGCATTCTCACT 59.111 40.909 0.00 0.00 45.23 3.41
6068 7788 9.326339 CTTACTTTTCTTATTTCCGTTTGCTAC 57.674 33.333 0.00 0.00 0.00 3.58
6070 7790 7.136772 ACTTTTCTTATTTCCGTTTGCTACAC 58.863 34.615 0.00 0.00 0.00 2.90
6172 7892 0.771755 AGTTCAGGGTTGGGAAGGTC 59.228 55.000 0.00 0.00 0.00 3.85
6233 7953 2.127708 ACCAAACAGTCCACTCTTCCT 58.872 47.619 0.00 0.00 0.00 3.36
6451 8171 0.535102 ACTCCTTGTGAAACCAGCCG 60.535 55.000 0.00 0.00 34.36 5.52
6482 8202 9.199982 CGAAAAGTGGACTATTTCAGTAGTTTA 57.800 33.333 11.53 0.00 37.72 2.01
6919 8640 4.012374 TGGAAGTTCAGGCAAGATTGATC 58.988 43.478 5.01 0.00 0.00 2.92
6945 8666 7.052873 CAGTGGACAATTCATATCTTCTTCCT 58.947 38.462 0.00 0.00 0.00 3.36
7022 8743 4.113354 CCCGAATCAACTAGTAGAACTGC 58.887 47.826 3.59 0.00 0.00 4.40
7023 8744 4.381612 CCCGAATCAACTAGTAGAACTGCA 60.382 45.833 3.59 0.00 0.00 4.41
7103 8824 6.034577 GTCAAGGTACAAAGACAAAAGTTTGC 59.965 38.462 3.68 0.00 41.79 3.68
7195 8916 8.740906 ACTCTGATTAGATTCGTTCTAACTGAA 58.259 33.333 11.11 3.76 46.96 3.02
7331 9052 1.617947 ATCCAGTGGCCTTCTCGGAC 61.618 60.000 3.51 0.00 43.30 4.79
7337 9058 3.379445 GCCTTCTCGGACGACCCA 61.379 66.667 0.00 0.00 33.16 4.51
7343 9064 1.263356 TCTCGGACGACCCATTCTTT 58.737 50.000 0.00 0.00 34.14 2.52
7418 9139 2.367202 GGATCCGGTGGCCTTCTCA 61.367 63.158 3.32 0.00 0.00 3.27
7494 9215 2.182030 CCGCTTCTCACGAGGACC 59.818 66.667 0.00 0.00 0.00 4.46
7550 9271 1.080093 GATCCAGAACGTGTGCGGA 60.080 57.895 0.00 0.00 43.45 5.54
7902 9629 5.361857 GGTGTTACTAGTATACAAGGGCAGA 59.638 44.000 15.13 0.00 0.00 4.26
7904 9631 7.232127 GGTGTTACTAGTATACAAGGGCAGATA 59.768 40.741 15.13 0.00 0.00 1.98
8005 9732 7.488322 CAAACTTTTGGTAACCTCAATTCTCA 58.512 34.615 0.00 0.00 34.59 3.27
8032 9760 4.698201 TTTCCATTTCAGTTTTTCCCCC 57.302 40.909 0.00 0.00 0.00 5.40
8036 9796 3.769300 CCATTTCAGTTTTTCCCCCTAGG 59.231 47.826 0.06 0.06 0.00 3.02
8039 9799 4.546224 TTCAGTTTTTCCCCCTAGGTTT 57.454 40.909 8.29 0.00 36.75 3.27
8041 9801 5.666474 TCAGTTTTTCCCCCTAGGTTTAA 57.334 39.130 8.29 0.00 36.75 1.52
8045 9805 8.403474 TCAGTTTTTCCCCCTAGGTTTAATTAT 58.597 33.333 8.29 0.00 36.75 1.28
8077 9837 8.060931 TGCTACTGAGAGATAATATTGCTAGG 57.939 38.462 0.00 0.00 0.00 3.02
8078 9838 6.978080 GCTACTGAGAGATAATATTGCTAGGC 59.022 42.308 0.00 0.00 0.00 3.93
8079 9839 6.924913 ACTGAGAGATAATATTGCTAGGCA 57.075 37.500 0.00 0.00 36.47 4.75
8092 9852 5.357742 TTGCTAGGCAATTCATCTCTACA 57.642 39.130 0.51 0.00 43.99 2.74
8097 9857 6.015856 GCTAGGCAATTCATCTCTACACTCTA 60.016 42.308 0.00 0.00 0.00 2.43
8108 9868 3.017442 TCTACACTCTATCGTGCAGCTT 58.983 45.455 0.00 0.00 38.45 3.74
8109 9869 2.001812 ACACTCTATCGTGCAGCTTG 57.998 50.000 0.00 0.00 38.45 4.01
8111 9871 2.191802 CACTCTATCGTGCAGCTTGAG 58.808 52.381 0.00 0.00 0.00 3.02
8124 9884 4.933563 TTGAGCAGCAGCCACGCA 62.934 61.111 0.00 0.00 43.56 5.24
8125 9885 4.710167 TGAGCAGCAGCCACGCAT 62.710 61.111 0.00 0.00 43.56 4.73
8127 9887 2.046023 AGCAGCAGCCACGCATAA 60.046 55.556 0.00 0.00 43.56 1.90
8129 9889 3.723364 GCAGCAGCCACGCATAACG 62.723 63.158 0.00 0.00 40.97 3.18
8143 9903 4.934666 CGCATAACGCACATCTTATAGTG 58.065 43.478 0.00 0.00 42.60 2.74
8157 9917 6.614694 TCTTATAGTGCAGTGGGTTTCTTA 57.385 37.500 3.69 0.00 0.00 2.10
8177 9937 5.248477 TCTTAATAGTGCTTGAGGGTTCACT 59.752 40.000 0.00 0.00 41.93 3.41
8219 9981 2.635915 TGTTCATGGGAAGTAACGAGGT 59.364 45.455 0.00 0.00 32.62 3.85
8220 9982 3.000727 GTTCATGGGAAGTAACGAGGTG 58.999 50.000 0.00 0.00 32.62 4.00
8221 9983 2.531771 TCATGGGAAGTAACGAGGTGA 58.468 47.619 0.00 0.00 0.00 4.02
8222 9984 3.104512 TCATGGGAAGTAACGAGGTGAT 58.895 45.455 0.00 0.00 0.00 3.06
8223 9985 3.132289 TCATGGGAAGTAACGAGGTGATC 59.868 47.826 0.00 0.00 0.00 2.92
8233 9995 3.170791 ACGAGGTGATCACATTAGCAG 57.829 47.619 26.47 12.32 0.00 4.24
8247 10009 4.156008 ACATTAGCAGTTTGATCGGGAAAC 59.844 41.667 0.08 0.08 34.15 2.78
8253 10015 1.463444 GTTTGATCGGGAAACGGTGAG 59.537 52.381 0.00 0.00 44.45 3.51
8257 10019 1.541310 ATCGGGAAACGGTGAGCTCA 61.541 55.000 13.74 13.74 44.45 4.26
8274 10036 1.534595 CTCAAAGACAGTTCCAGCTGC 59.465 52.381 8.66 0.00 39.96 5.25
8304 10068 0.739462 CCTTCGGACGTATGCTGCAA 60.739 55.000 6.36 0.00 0.00 4.08
8306 10070 1.665679 CTTCGGACGTATGCTGCAATT 59.334 47.619 6.36 0.00 0.00 2.32
8321 10085 2.950975 TGCAATTTCACTGCACTCTGAA 59.049 40.909 0.00 0.00 44.67 3.02
8322 10086 3.380954 TGCAATTTCACTGCACTCTGAAA 59.619 39.130 10.41 10.41 44.67 2.69
8329 10093 0.535102 CTGCACTCTGAAACCCCGTT 60.535 55.000 0.00 0.00 0.00 4.44
8330 10094 0.817634 TGCACTCTGAAACCCCGTTG 60.818 55.000 0.00 0.00 0.00 4.10
8334 10099 1.235724 CTCTGAAACCCCGTTGGAAC 58.764 55.000 0.00 0.00 38.00 3.62
8350 10115 0.871057 GAACAGTCCTTGCTGCTGAC 59.129 55.000 0.00 5.38 39.96 3.51
8368 10133 2.203015 AGTGTCGCTGCAAACGGT 60.203 55.556 8.74 0.00 0.00 4.83
8396 10161 2.877786 CCTTGAACAAATTTTGGCCACC 59.122 45.455 3.88 0.00 34.12 4.61
8402 10167 2.705127 ACAAATTTTGGCCACCATCACT 59.295 40.909 3.88 0.00 31.53 3.41
8406 10171 2.079170 TTTGGCCACCATCACTCAAA 57.921 45.000 3.88 0.00 31.53 2.69
8407 10172 1.619654 TTGGCCACCATCACTCAAAG 58.380 50.000 3.88 0.00 31.53 2.77
8408 10173 0.895100 TGGCCACCATCACTCAAAGC 60.895 55.000 0.00 0.00 0.00 3.51
8409 10174 1.598701 GGCCACCATCACTCAAAGCC 61.599 60.000 0.00 0.00 0.00 4.35
8410 10175 0.895100 GCCACCATCACTCAAAGCCA 60.895 55.000 0.00 0.00 0.00 4.75
8411 10176 0.883833 CCACCATCACTCAAAGCCAC 59.116 55.000 0.00 0.00 0.00 5.01
8412 10177 1.608055 CACCATCACTCAAAGCCACA 58.392 50.000 0.00 0.00 0.00 4.17
8413 10178 1.955778 CACCATCACTCAAAGCCACAA 59.044 47.619 0.00 0.00 0.00 3.33
8414 10179 2.559668 CACCATCACTCAAAGCCACAAT 59.440 45.455 0.00 0.00 0.00 2.71
8415 10180 2.559668 ACCATCACTCAAAGCCACAATG 59.440 45.455 0.00 0.00 0.00 2.82
8416 10181 2.821378 CCATCACTCAAAGCCACAATGA 59.179 45.455 0.00 0.00 0.00 2.57
8417 10182 3.366679 CCATCACTCAAAGCCACAATGAC 60.367 47.826 0.00 0.00 0.00 3.06
8418 10183 3.213206 TCACTCAAAGCCACAATGACT 57.787 42.857 0.00 0.00 0.00 3.41
8419 10184 2.880268 TCACTCAAAGCCACAATGACTG 59.120 45.455 0.00 0.00 0.00 3.51
8420 10185 2.880268 CACTCAAAGCCACAATGACTGA 59.120 45.455 0.00 0.00 0.00 3.41
8421 10186 3.058432 CACTCAAAGCCACAATGACTGAG 60.058 47.826 0.00 0.00 35.92 3.35
8422 10187 2.486982 CTCAAAGCCACAATGACTGAGG 59.513 50.000 0.00 0.00 38.73 3.86
8423 10188 2.158623 TCAAAGCCACAATGACTGAGGT 60.159 45.455 0.00 0.00 38.03 3.85
8424 10189 1.901591 AAGCCACAATGACTGAGGTG 58.098 50.000 0.00 0.00 38.03 4.00
8425 10190 0.607489 AGCCACAATGACTGAGGTGC 60.607 55.000 0.00 0.00 38.03 5.01
8426 10191 1.589716 GCCACAATGACTGAGGTGCC 61.590 60.000 0.00 0.00 38.03 5.01
8427 10192 1.300971 CCACAATGACTGAGGTGCCG 61.301 60.000 0.00 0.00 31.47 5.69
8428 10193 0.603707 CACAATGACTGAGGTGCCGT 60.604 55.000 0.00 0.00 0.00 5.68
8429 10194 0.320771 ACAATGACTGAGGTGCCGTC 60.321 55.000 0.00 0.00 0.00 4.79
8430 10195 1.021390 CAATGACTGAGGTGCCGTCC 61.021 60.000 0.00 0.00 0.00 4.79
8431 10196 2.185310 AATGACTGAGGTGCCGTCCC 62.185 60.000 0.00 0.00 0.00 4.46
8432 10197 2.997897 GACTGAGGTGCCGTCCCT 60.998 66.667 0.00 0.00 34.11 4.20
8436 10201 3.462678 GAGGTGCCGTCCCTCTCC 61.463 72.222 5.31 0.00 44.29 3.71
8439 10204 4.436998 GTGCCGTCCCTCTCCGTG 62.437 72.222 0.00 0.00 0.00 4.94
8442 10207 4.135153 CCGTCCCTCTCCGTGCTG 62.135 72.222 0.00 0.00 0.00 4.41
8443 10208 4.803426 CGTCCCTCTCCGTGCTGC 62.803 72.222 0.00 0.00 0.00 5.25
8444 10209 4.459089 GTCCCTCTCCGTGCTGCC 62.459 72.222 0.00 0.00 0.00 4.85
8481 10246 3.231734 CGCAAGGACTGTCAATCCA 57.768 52.632 10.38 0.00 38.86 3.41
8482 10247 0.798776 CGCAAGGACTGTCAATCCAC 59.201 55.000 10.38 0.00 38.86 4.02
8483 10248 1.168714 GCAAGGACTGTCAATCCACC 58.831 55.000 10.38 0.00 38.86 4.61
8484 10249 1.545428 GCAAGGACTGTCAATCCACCA 60.545 52.381 10.38 0.00 38.86 4.17
8485 10250 2.154462 CAAGGACTGTCAATCCACCAC 58.846 52.381 10.38 0.00 38.86 4.16
8486 10251 0.693049 AGGACTGTCAATCCACCACC 59.307 55.000 10.38 0.00 38.86 4.61
8487 10252 0.693049 GGACTGTCAATCCACCACCT 59.307 55.000 10.38 0.00 36.15 4.00
8488 10253 1.339151 GGACTGTCAATCCACCACCTC 60.339 57.143 10.38 0.00 36.15 3.85
8489 10254 1.347707 GACTGTCAATCCACCACCTCA 59.652 52.381 2.24 0.00 0.00 3.86
8490 10255 1.349026 ACTGTCAATCCACCACCTCAG 59.651 52.381 0.00 0.00 0.00 3.35
8491 10256 0.692476 TGTCAATCCACCACCTCAGG 59.308 55.000 0.00 0.00 0.00 3.86
8492 10257 0.678048 GTCAATCCACCACCTCAGGC 60.678 60.000 0.00 0.00 0.00 4.85
8493 10258 1.379044 CAATCCACCACCTCAGGCC 60.379 63.158 0.00 0.00 0.00 5.19
8494 10259 1.542375 AATCCACCACCTCAGGCCT 60.542 57.895 0.00 0.00 0.00 5.19
8495 10260 1.142688 AATCCACCACCTCAGGCCTT 61.143 55.000 0.00 0.00 0.00 4.35
8496 10261 1.856539 ATCCACCACCTCAGGCCTTG 61.857 60.000 0.00 0.00 0.00 3.61
8497 10262 2.833913 CCACCACCTCAGGCCTTGT 61.834 63.158 0.00 0.00 0.00 3.16
8498 10263 1.151450 CACCACCTCAGGCCTTGTT 59.849 57.895 0.00 0.00 0.00 2.83
8499 10264 0.890996 CACCACCTCAGGCCTTGTTC 60.891 60.000 0.00 0.00 0.00 3.18
8500 10265 1.672356 CCACCTCAGGCCTTGTTCG 60.672 63.158 0.00 0.00 0.00 3.95
8501 10266 1.672356 CACCTCAGGCCTTGTTCGG 60.672 63.158 0.00 1.25 0.00 4.30
8502 10267 2.147387 ACCTCAGGCCTTGTTCGGT 61.147 57.895 0.00 1.99 0.00 4.69
8503 10268 1.073199 CCTCAGGCCTTGTTCGGTT 59.927 57.895 0.00 0.00 0.00 4.44
8504 10269 0.323629 CCTCAGGCCTTGTTCGGTTA 59.676 55.000 0.00 0.00 0.00 2.85
8505 10270 1.439679 CTCAGGCCTTGTTCGGTTAC 58.560 55.000 0.00 0.00 0.00 2.50
8506 10271 0.320073 TCAGGCCTTGTTCGGTTACG 60.320 55.000 0.00 0.00 42.74 3.18
8507 10272 1.670083 AGGCCTTGTTCGGTTACGC 60.670 57.895 0.00 0.00 40.69 4.42
8508 10273 2.683859 GGCCTTGTTCGGTTACGCC 61.684 63.158 0.00 0.00 40.69 5.68
8509 10274 2.683859 GCCTTGTTCGGTTACGCCC 61.684 63.158 0.00 0.00 40.69 6.13
8510 10275 1.004200 CCTTGTTCGGTTACGCCCT 60.004 57.895 0.00 0.00 40.69 5.19
8511 10276 0.604511 CCTTGTTCGGTTACGCCCTT 60.605 55.000 0.00 0.00 40.69 3.95
8512 10277 1.232119 CTTGTTCGGTTACGCCCTTT 58.768 50.000 0.00 0.00 40.69 3.11
8513 10278 0.945813 TTGTTCGGTTACGCCCTTTG 59.054 50.000 0.00 0.00 40.69 2.77
8514 10279 0.106335 TGTTCGGTTACGCCCTTTGA 59.894 50.000 0.00 0.00 40.69 2.69
8515 10280 1.270947 TGTTCGGTTACGCCCTTTGAT 60.271 47.619 0.00 0.00 40.69 2.57
8516 10281 2.028294 TGTTCGGTTACGCCCTTTGATA 60.028 45.455 0.00 0.00 40.69 2.15
8517 10282 3.002102 GTTCGGTTACGCCCTTTGATAA 58.998 45.455 0.00 0.00 40.69 1.75
8518 10283 2.896168 TCGGTTACGCCCTTTGATAAG 58.104 47.619 0.00 0.00 40.69 1.73
8519 10284 2.496871 TCGGTTACGCCCTTTGATAAGA 59.503 45.455 0.00 0.00 40.69 2.10
8520 10285 2.864343 CGGTTACGCCCTTTGATAAGAG 59.136 50.000 0.00 0.00 32.92 2.85
8521 10286 3.203716 GGTTACGCCCTTTGATAAGAGG 58.796 50.000 0.00 0.00 32.92 3.69
8522 10287 3.118519 GGTTACGCCCTTTGATAAGAGGA 60.119 47.826 0.00 0.00 34.91 3.71
8523 10288 4.444449 GGTTACGCCCTTTGATAAGAGGAT 60.444 45.833 0.00 0.00 34.91 3.24
8524 10289 3.933861 ACGCCCTTTGATAAGAGGATT 57.066 42.857 0.00 0.00 34.91 3.01
8525 10290 3.545703 ACGCCCTTTGATAAGAGGATTG 58.454 45.455 0.00 0.00 34.91 2.67
8526 10291 2.880890 CGCCCTTTGATAAGAGGATTGG 59.119 50.000 0.00 0.00 34.91 3.16
8527 10292 3.433598 CGCCCTTTGATAAGAGGATTGGA 60.434 47.826 0.00 0.00 34.91 3.53
8528 10293 4.140536 GCCCTTTGATAAGAGGATTGGAG 58.859 47.826 0.00 0.00 34.91 3.86
8529 10294 4.723309 CCCTTTGATAAGAGGATTGGAGG 58.277 47.826 0.00 0.00 34.91 4.30
8530 10295 4.446889 CCCTTTGATAAGAGGATTGGAGGG 60.447 50.000 0.00 0.00 34.91 4.30
8531 10296 4.446889 CCTTTGATAAGAGGATTGGAGGGG 60.447 50.000 0.00 0.00 34.91 4.79
8532 10297 3.724966 TGATAAGAGGATTGGAGGGGA 57.275 47.619 0.00 0.00 0.00 4.81
8533 10298 4.234170 TGATAAGAGGATTGGAGGGGAT 57.766 45.455 0.00 0.00 0.00 3.85
8534 10299 4.581233 TGATAAGAGGATTGGAGGGGATT 58.419 43.478 0.00 0.00 0.00 3.01
8535 10300 4.984268 TGATAAGAGGATTGGAGGGGATTT 59.016 41.667 0.00 0.00 0.00 2.17
8536 10301 5.436374 TGATAAGAGGATTGGAGGGGATTTT 59.564 40.000 0.00 0.00 0.00 1.82
8537 10302 3.677156 AGAGGATTGGAGGGGATTTTG 57.323 47.619 0.00 0.00 0.00 2.44
8538 10303 3.201363 AGAGGATTGGAGGGGATTTTGA 58.799 45.455 0.00 0.00 0.00 2.69
8539 10304 3.053320 AGAGGATTGGAGGGGATTTTGAC 60.053 47.826 0.00 0.00 0.00 3.18
8540 10305 2.929043 AGGATTGGAGGGGATTTTGACT 59.071 45.455 0.00 0.00 0.00 3.41
8541 10306 3.337909 AGGATTGGAGGGGATTTTGACTT 59.662 43.478 0.00 0.00 0.00 3.01
8542 10307 3.448660 GGATTGGAGGGGATTTTGACTTG 59.551 47.826 0.00 0.00 0.00 3.16
8543 10308 1.923356 TGGAGGGGATTTTGACTTGC 58.077 50.000 0.00 0.00 0.00 4.01
8544 10309 1.146774 TGGAGGGGATTTTGACTTGCA 59.853 47.619 0.00 0.00 0.00 4.08
8545 10310 1.821136 GGAGGGGATTTTGACTTGCAG 59.179 52.381 0.00 0.00 0.00 4.41
8546 10311 2.555227 GGAGGGGATTTTGACTTGCAGA 60.555 50.000 0.00 0.00 0.00 4.26
8547 10312 2.751806 GAGGGGATTTTGACTTGCAGAG 59.248 50.000 0.00 0.00 0.00 3.35
8548 10313 1.821136 GGGGATTTTGACTTGCAGAGG 59.179 52.381 0.00 0.00 0.00 3.69
8549 10314 2.555227 GGGGATTTTGACTTGCAGAGGA 60.555 50.000 0.00 0.00 0.00 3.71
8550 10315 3.359950 GGGATTTTGACTTGCAGAGGAT 58.640 45.455 0.00 0.00 0.00 3.24
8551 10316 3.766051 GGGATTTTGACTTGCAGAGGATT 59.234 43.478 0.00 0.00 0.00 3.01
8552 10317 4.949856 GGGATTTTGACTTGCAGAGGATTA 59.050 41.667 0.00 0.00 0.00 1.75
8553 10318 5.418840 GGGATTTTGACTTGCAGAGGATTAA 59.581 40.000 0.00 0.00 0.00 1.40
8554 10319 6.071391 GGGATTTTGACTTGCAGAGGATTAAA 60.071 38.462 0.00 0.00 0.00 1.52
8555 10320 7.364144 GGGATTTTGACTTGCAGAGGATTAAAT 60.364 37.037 0.00 0.00 0.00 1.40
8556 10321 7.704047 GGATTTTGACTTGCAGAGGATTAAATC 59.296 37.037 0.00 0.00 0.00 2.17
8557 10322 7.523293 TTTTGACTTGCAGAGGATTAAATCA 57.477 32.000 0.00 0.00 0.00 2.57
8558 10323 7.523293 TTTGACTTGCAGAGGATTAAATCAA 57.477 32.000 0.00 0.00 0.00 2.57
8559 10324 6.500684 TGACTTGCAGAGGATTAAATCAAC 57.499 37.500 0.00 0.00 0.00 3.18
8560 10325 5.415701 TGACTTGCAGAGGATTAAATCAACC 59.584 40.000 0.00 0.00 0.00 3.77
8561 10326 5.574188 ACTTGCAGAGGATTAAATCAACCT 58.426 37.500 0.00 0.00 35.29 3.50
8562 10327 5.649831 ACTTGCAGAGGATTAAATCAACCTC 59.350 40.000 0.00 0.00 46.28 3.85
8568 10333 6.641169 GAGGATTAAATCAACCTCAATCCC 57.359 41.667 0.00 0.00 43.73 3.85
8569 10334 6.347061 AGGATTAAATCAACCTCAATCCCT 57.653 37.500 7.79 0.00 43.73 4.20
8570 10335 6.131961 AGGATTAAATCAACCTCAATCCCTG 58.868 40.000 7.79 0.00 43.73 4.45
8571 10336 5.221322 GGATTAAATCAACCTCAATCCCTGC 60.221 44.000 0.00 0.00 39.05 4.85
8572 10337 2.149973 AATCAACCTCAATCCCTGCC 57.850 50.000 0.00 0.00 0.00 4.85
8573 10338 1.002069 ATCAACCTCAATCCCTGCCA 58.998 50.000 0.00 0.00 0.00 4.92
8574 10339 0.776810 TCAACCTCAATCCCTGCCAA 59.223 50.000 0.00 0.00 0.00 4.52
8575 10340 1.146774 TCAACCTCAATCCCTGCCAAA 59.853 47.619 0.00 0.00 0.00 3.28
8576 10341 1.969923 CAACCTCAATCCCTGCCAAAA 59.030 47.619 0.00 0.00 0.00 2.44
8577 10342 1.632589 ACCTCAATCCCTGCCAAAAC 58.367 50.000 0.00 0.00 0.00 2.43
8578 10343 0.897621 CCTCAATCCCTGCCAAAACC 59.102 55.000 0.00 0.00 0.00 3.27
8579 10344 0.527565 CTCAATCCCTGCCAAAACCG 59.472 55.000 0.00 0.00 0.00 4.44
8580 10345 0.178975 TCAATCCCTGCCAAAACCGT 60.179 50.000 0.00 0.00 0.00 4.83
8581 10346 0.678950 CAATCCCTGCCAAAACCGTT 59.321 50.000 0.00 0.00 0.00 4.44
8582 10347 0.678950 AATCCCTGCCAAAACCGTTG 59.321 50.000 0.00 0.00 0.00 4.10
8583 10348 1.815817 ATCCCTGCCAAAACCGTTGC 61.816 55.000 0.00 0.00 0.00 4.17
8584 10349 2.790791 CCCTGCCAAAACCGTTGCA 61.791 57.895 0.00 0.00 0.00 4.08
8585 10350 1.591327 CCTGCCAAAACCGTTGCAC 60.591 57.895 0.00 0.00 0.00 4.57
8586 10351 1.140589 CTGCCAAAACCGTTGCACA 59.859 52.632 0.00 0.00 0.00 4.57
8587 10352 0.459237 CTGCCAAAACCGTTGCACAA 60.459 50.000 0.00 0.00 0.00 3.33
8588 10353 0.737715 TGCCAAAACCGTTGCACAAC 60.738 50.000 3.37 3.37 37.92 3.32
8589 10354 1.425267 GCCAAAACCGTTGCACAACC 61.425 55.000 7.88 0.00 38.03 3.77
8590 10355 0.808060 CCAAAACCGTTGCACAACCC 60.808 55.000 7.88 0.00 38.03 4.11
8591 10356 0.174617 CAAAACCGTTGCACAACCCT 59.825 50.000 7.88 0.00 38.03 4.34
8592 10357 0.174617 AAAACCGTTGCACAACCCTG 59.825 50.000 7.88 0.29 38.03 4.45
8593 10358 0.968393 AAACCGTTGCACAACCCTGT 60.968 50.000 7.88 0.87 38.03 4.00
8594 10359 1.381165 AACCGTTGCACAACCCTGTC 61.381 55.000 7.88 0.00 38.03 3.51
8595 10360 1.821759 CCGTTGCACAACCCTGTCA 60.822 57.895 7.88 0.00 38.03 3.58
8596 10361 1.648720 CGTTGCACAACCCTGTCAG 59.351 57.895 7.88 0.00 38.03 3.51
8597 10362 1.360192 GTTGCACAACCCTGTCAGC 59.640 57.895 1.97 0.00 35.36 4.26
8598 10363 1.827789 TTGCACAACCCTGTCAGCC 60.828 57.895 0.00 0.00 31.64 4.85
8599 10364 3.357079 GCACAACCCTGTCAGCCG 61.357 66.667 0.00 0.00 31.64 5.52
8600 10365 2.425592 CACAACCCTGTCAGCCGA 59.574 61.111 0.00 0.00 31.64 5.54
8601 10366 1.227823 CACAACCCTGTCAGCCGAA 60.228 57.895 0.00 0.00 31.64 4.30
8602 10367 1.227853 ACAACCCTGTCAGCCGAAC 60.228 57.895 0.00 0.00 0.00 3.95
8603 10368 1.227823 CAACCCTGTCAGCCGAACA 60.228 57.895 0.00 0.00 0.00 3.18
8604 10369 1.227853 AACCCTGTCAGCCGAACAC 60.228 57.895 0.00 0.00 0.00 3.32
8605 10370 1.978455 AACCCTGTCAGCCGAACACA 61.978 55.000 0.00 0.00 0.00 3.72
8606 10371 1.669115 CCCTGTCAGCCGAACACAG 60.669 63.158 0.00 0.00 37.81 3.66
8607 10372 2.320587 CCTGTCAGCCGAACACAGC 61.321 63.158 0.00 0.00 36.91 4.40
8608 10373 2.280797 TGTCAGCCGAACACAGCC 60.281 61.111 0.00 0.00 0.00 4.85
8609 10374 2.031163 GTCAGCCGAACACAGCCT 59.969 61.111 0.00 0.00 0.00 4.58
8610 10375 2.029844 GTCAGCCGAACACAGCCTC 61.030 63.158 0.00 0.00 0.00 4.70
8611 10376 2.031012 CAGCCGAACACAGCCTCA 59.969 61.111 0.00 0.00 0.00 3.86
8612 10377 2.031516 CAGCCGAACACAGCCTCAG 61.032 63.158 0.00 0.00 0.00 3.35
8613 10378 2.743928 GCCGAACACAGCCTCAGG 60.744 66.667 0.00 0.00 0.00 3.86
8625 10390 2.810439 GCCTCAGGCTAGTCATAGTG 57.190 55.000 9.09 0.00 46.69 2.74
8626 10391 1.342819 GCCTCAGGCTAGTCATAGTGG 59.657 57.143 9.09 0.00 46.69 4.00
8627 10392 1.967066 CCTCAGGCTAGTCATAGTGGG 59.033 57.143 0.00 0.00 0.00 4.61
8628 10393 1.967066 CTCAGGCTAGTCATAGTGGGG 59.033 57.143 0.00 0.00 0.00 4.96
8629 10394 1.291033 TCAGGCTAGTCATAGTGGGGT 59.709 52.381 0.00 0.00 0.00 4.95
8630 10395 2.516702 TCAGGCTAGTCATAGTGGGGTA 59.483 50.000 0.00 0.00 0.00 3.69
8631 10396 3.052414 TCAGGCTAGTCATAGTGGGGTAA 60.052 47.826 0.00 0.00 0.00 2.85
8632 10397 3.069729 CAGGCTAGTCATAGTGGGGTAAC 59.930 52.174 0.00 0.00 0.00 2.50
8633 10398 3.052033 AGGCTAGTCATAGTGGGGTAACT 60.052 47.826 0.00 0.00 0.00 2.24
8634 10399 3.710165 GGCTAGTCATAGTGGGGTAACTT 59.290 47.826 0.00 0.00 0.00 2.66
8635 10400 4.897670 GGCTAGTCATAGTGGGGTAACTTA 59.102 45.833 0.00 0.00 0.00 2.24
8636 10401 5.010820 GGCTAGTCATAGTGGGGTAACTTAG 59.989 48.000 0.00 0.00 0.00 2.18
8637 10402 5.832060 GCTAGTCATAGTGGGGTAACTTAGA 59.168 44.000 0.00 0.00 0.00 2.10
8638 10403 6.494146 GCTAGTCATAGTGGGGTAACTTAGAT 59.506 42.308 0.00 0.00 0.00 1.98
8639 10404 7.668886 GCTAGTCATAGTGGGGTAACTTAGATA 59.331 40.741 0.00 0.00 0.00 1.98
8640 10405 9.233649 CTAGTCATAGTGGGGTAACTTAGATAG 57.766 40.741 0.00 0.00 0.00 2.08
8641 10406 7.593653 AGTCATAGTGGGGTAACTTAGATAGT 58.406 38.462 0.00 0.00 39.32 2.12
8642 10407 8.730948 AGTCATAGTGGGGTAACTTAGATAGTA 58.269 37.037 0.00 0.00 35.54 1.82
8643 10408 9.359653 GTCATAGTGGGGTAACTTAGATAGTAA 57.640 37.037 0.00 0.00 35.54 2.24
8644 10409 9.359653 TCATAGTGGGGTAACTTAGATAGTAAC 57.640 37.037 0.00 0.00 35.54 2.50
8645 10410 9.364653 CATAGTGGGGTAACTTAGATAGTAACT 57.635 37.037 0.00 0.00 35.54 2.24
8646 10411 9.948747 ATAGTGGGGTAACTTAGATAGTAACTT 57.051 33.333 0.00 0.00 35.54 2.66
8648 10413 9.774071 AGTGGGGTAACTTAGATAGTAACTTAA 57.226 33.333 0.00 0.00 35.54 1.85
8649 10414 9.809096 GTGGGGTAACTTAGATAGTAACTTAAC 57.191 37.037 0.00 0.00 35.54 2.01
8650 10415 9.545928 TGGGGTAACTTAGATAGTAACTTAACA 57.454 33.333 0.00 0.00 35.54 2.41
8651 10416 9.809096 GGGGTAACTTAGATAGTAACTTAACAC 57.191 37.037 0.00 0.00 35.54 3.32
8657 10422 9.263446 ACTTAGATAGTAACTTAACACATCCCA 57.737 33.333 0.00 0.00 34.56 4.37
8660 10425 8.375493 AGATAGTAACTTAACACATCCCAAGA 57.625 34.615 0.00 0.00 0.00 3.02
8661 10426 8.993424 AGATAGTAACTTAACACATCCCAAGAT 58.007 33.333 0.00 0.00 0.00 2.40
8665 10430 9.975218 AGTAACTTAACACATCCCAAGATAATT 57.025 29.630 0.00 0.00 0.00 1.40
8668 10433 9.927668 AACTTAACACATCCCAAGATAATTTTG 57.072 29.630 0.00 0.00 0.00 2.44
8669 10434 8.034804 ACTTAACACATCCCAAGATAATTTTGC 58.965 33.333 0.00 0.00 0.00 3.68
8670 10435 6.610075 AACACATCCCAAGATAATTTTGCT 57.390 33.333 0.00 0.00 0.00 3.91
8671 10436 6.610075 ACACATCCCAAGATAATTTTGCTT 57.390 33.333 0.00 0.00 0.00 3.91
8672 10437 6.400568 ACACATCCCAAGATAATTTTGCTTG 58.599 36.000 0.00 0.00 38.90 4.01
8673 10438 6.014327 ACACATCCCAAGATAATTTTGCTTGT 60.014 34.615 0.00 1.19 37.82 3.16
8674 10439 6.311935 CACATCCCAAGATAATTTTGCTTGTG 59.688 38.462 0.00 7.48 37.82 3.33
8675 10440 6.014327 ACATCCCAAGATAATTTTGCTTGTGT 60.014 34.615 0.00 0.00 37.82 3.72
8676 10441 5.782047 TCCCAAGATAATTTTGCTTGTGTG 58.218 37.500 0.00 0.00 37.82 3.82
8677 10442 4.931002 CCCAAGATAATTTTGCTTGTGTGG 59.069 41.667 0.00 0.00 37.82 4.17
8678 10443 4.389687 CCAAGATAATTTTGCTTGTGTGGC 59.610 41.667 0.00 0.00 37.82 5.01
8679 10444 4.870123 AGATAATTTTGCTTGTGTGGCA 57.130 36.364 0.00 0.00 37.97 4.92
8680 10445 5.212532 AGATAATTTTGCTTGTGTGGCAA 57.787 34.783 0.00 0.00 46.12 4.52
8688 10453 5.521906 TTGCTTGTGTGGCAACTATTTAA 57.478 34.783 0.00 0.00 43.50 1.52
8689 10454 5.720371 TGCTTGTGTGGCAACTATTTAAT 57.280 34.783 0.00 0.00 36.71 1.40
8690 10455 5.468592 TGCTTGTGTGGCAACTATTTAATG 58.531 37.500 0.00 0.00 36.71 1.90
8691 10456 5.242615 TGCTTGTGTGGCAACTATTTAATGA 59.757 36.000 0.00 0.00 36.71 2.57
8692 10457 5.801947 GCTTGTGTGGCAACTATTTAATGAG 59.198 40.000 0.00 0.00 32.90 2.90
8693 10458 5.895636 TGTGTGGCAACTATTTAATGAGG 57.104 39.130 0.00 0.00 37.61 3.86
8694 10459 5.565509 TGTGTGGCAACTATTTAATGAGGA 58.434 37.500 0.00 0.00 37.61 3.71
8695 10460 6.007076 TGTGTGGCAACTATTTAATGAGGAA 58.993 36.000 0.00 0.00 37.61 3.36
8696 10461 6.491745 TGTGTGGCAACTATTTAATGAGGAAA 59.508 34.615 0.00 0.00 37.61 3.13
8697 10462 7.029563 GTGTGGCAACTATTTAATGAGGAAAG 58.970 38.462 0.00 0.00 37.61 2.62
8698 10463 6.945435 TGTGGCAACTATTTAATGAGGAAAGA 59.055 34.615 0.00 0.00 37.61 2.52
8699 10464 7.121168 TGTGGCAACTATTTAATGAGGAAAGAG 59.879 37.037 0.00 0.00 32.59 2.85
8700 10465 6.603201 TGGCAACTATTTAATGAGGAAAGAGG 59.397 38.462 0.00 0.00 30.97 3.69
8701 10466 6.603599 GGCAACTATTTAATGAGGAAAGAGGT 59.396 38.462 0.00 0.00 30.97 3.85
8702 10467 7.415653 GGCAACTATTTAATGAGGAAAGAGGTG 60.416 40.741 3.95 3.95 42.85 4.00
8703 10468 7.475840 CAACTATTTAATGAGGAAAGAGGTGC 58.524 38.462 0.00 0.00 36.39 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
307 332 0.037590 TTCCGCCATATACCCATGCC 59.962 55.000 0.00 0.00 0.00 4.40
328 353 3.627395 TGCATACAGGGTTCAACTAGG 57.373 47.619 0.00 0.00 0.00 3.02
379 412 1.808945 CTCGAAATGGAACTTGCTGCT 59.191 47.619 0.00 0.00 0.00 4.24
509 542 5.627499 TTTGGCAATGATCTTACAGTGAC 57.373 39.130 0.00 0.00 43.05 3.67
527 560 4.439057 TCTTAACGGTGCTATAGCTTTGG 58.561 43.478 24.61 13.62 42.66 3.28
575 611 1.003851 CAACAGTCAAACGACGGTGT 58.996 50.000 0.00 0.00 40.35 4.16
642 1170 1.797933 CAAGTCGAGACCGTGAGCG 60.798 63.158 0.00 0.00 37.05 5.03
647 1175 1.215647 GATGCCAAGTCGAGACCGT 59.784 57.895 0.00 0.00 37.05 4.83
648 1176 0.526524 GAGATGCCAAGTCGAGACCG 60.527 60.000 0.00 0.00 37.07 4.79
656 1184 0.403271 ACAAGCCAGAGATGCCAAGT 59.597 50.000 0.00 0.00 0.00 3.16
762 1345 9.069082 AGTCATACACCTATTACTGAGACATAC 57.931 37.037 0.00 0.00 0.00 2.39
1097 1681 0.676782 GGTATTGTGGCGAGTTGGCT 60.677 55.000 5.40 0.00 45.14 4.75
1269 1853 0.251832 TCCTCCTGACTGGTCCTGTC 60.252 60.000 19.34 19.34 37.07 3.51
1434 2018 1.102978 GAGAGAGAGAGAGTGGTGCC 58.897 60.000 0.00 0.00 0.00 5.01
1439 2023 4.648762 AGAGAGAGAGAGAGAGAGAGAGTG 59.351 50.000 0.00 0.00 0.00 3.51
1440 2024 4.877773 AGAGAGAGAGAGAGAGAGAGAGT 58.122 47.826 0.00 0.00 0.00 3.24
1441 2025 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1442 2026 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1443 2027 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1444 2028 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1445 2029 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1446 2030 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1447 2031 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1448 2032 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1449 2033 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1450 2034 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1451 2035 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1452 2036 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1453 2037 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1454 2038 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1455 2039 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1456 2040 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1457 2041 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1458 2042 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1459 2043 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
1460 2044 4.078922 AGGAGAGAGAGAGAGAGAGAGAGA 60.079 50.000 0.00 0.00 0.00 3.10
1461 2045 4.039004 CAGGAGAGAGAGAGAGAGAGAGAG 59.961 54.167 0.00 0.00 0.00 3.20
1462 2046 3.963374 CAGGAGAGAGAGAGAGAGAGAGA 59.037 52.174 0.00 0.00 0.00 3.10
1481 2077 4.487714 TCCTTTACCAGCAATAGACAGG 57.512 45.455 0.00 0.00 0.00 4.00
1546 2142 8.218488 AGAATTGAAGATATTTACAGGTACCCC 58.782 37.037 8.74 0.00 0.00 4.95
1621 2217 8.876275 AATTCATGCGCATAATTGTTCTAAAT 57.124 26.923 24.84 4.77 0.00 1.40
1705 2301 4.993905 AGAAACAAACAGCAAGTGGTTAC 58.006 39.130 0.00 0.00 31.77 2.50
2015 2612 2.986728 AGAGCAAAAAGAGTAAGGGGGA 59.013 45.455 0.00 0.00 0.00 4.81
2510 3117 2.389715 AGTATTTCCGGACAGAGGGAG 58.610 52.381 1.83 0.00 33.01 4.30
2511 3118 2.500098 CAAGTATTTCCGGACAGAGGGA 59.500 50.000 1.83 0.00 0.00 4.20
2512 3119 2.236395 ACAAGTATTTCCGGACAGAGGG 59.764 50.000 1.83 0.00 0.00 4.30
2513 3120 3.522553 GACAAGTATTTCCGGACAGAGG 58.477 50.000 1.83 0.00 0.00 3.69
2514 3121 3.195825 AGGACAAGTATTTCCGGACAGAG 59.804 47.826 1.83 0.00 36.95 3.35
2515 3122 3.170717 AGGACAAGTATTTCCGGACAGA 58.829 45.455 1.83 0.00 36.95 3.41
2516 3123 3.611766 AGGACAAGTATTTCCGGACAG 57.388 47.619 1.83 0.00 36.95 3.51
2517 3124 4.346730 TCTAGGACAAGTATTTCCGGACA 58.653 43.478 1.83 0.00 36.95 4.02
2518 3125 4.996788 TCTAGGACAAGTATTTCCGGAC 57.003 45.455 1.83 0.00 36.95 4.79
2519 3126 6.346096 CATTTCTAGGACAAGTATTTCCGGA 58.654 40.000 0.00 0.00 36.95 5.14
2520 3127 5.527582 CCATTTCTAGGACAAGTATTTCCGG 59.472 44.000 0.00 0.00 36.95 5.14
2521 3128 5.527582 CCCATTTCTAGGACAAGTATTTCCG 59.472 44.000 0.00 0.00 36.95 4.30
2522 3129 6.424032 ACCCATTTCTAGGACAAGTATTTCC 58.576 40.000 0.00 0.00 0.00 3.13
2523 3130 6.542735 GGACCCATTTCTAGGACAAGTATTTC 59.457 42.308 0.00 0.00 0.00 2.17
2524 3131 6.011981 TGGACCCATTTCTAGGACAAGTATTT 60.012 38.462 0.00 0.00 0.00 1.40
2525 3132 5.491078 TGGACCCATTTCTAGGACAAGTATT 59.509 40.000 0.00 0.00 0.00 1.89
2526 3133 5.036916 TGGACCCATTTCTAGGACAAGTAT 58.963 41.667 0.00 0.00 0.00 2.12
2527 3134 4.431378 TGGACCCATTTCTAGGACAAGTA 58.569 43.478 0.00 0.00 0.00 2.24
2528 3135 3.256704 TGGACCCATTTCTAGGACAAGT 58.743 45.455 0.00 0.00 0.00 3.16
2529 3136 4.510167 ATGGACCCATTTCTAGGACAAG 57.490 45.455 0.00 0.00 31.82 3.16
2530 3137 4.946160 AATGGACCCATTTCTAGGACAA 57.054 40.909 8.40 0.00 43.32 3.18
2546 3153 6.346096 CGGAAATACTTGTCCTAGAAATGGA 58.654 40.000 0.00 0.00 0.00 3.41
2547 3154 5.527582 CCGGAAATACTTGTCCTAGAAATGG 59.472 44.000 0.00 0.00 0.00 3.16
2548 3155 6.258068 GTCCGGAAATACTTGTCCTAGAAATG 59.742 42.308 5.23 0.00 0.00 2.32
2549 3156 6.346896 GTCCGGAAATACTTGTCCTAGAAAT 58.653 40.000 5.23 0.00 0.00 2.17
2550 3157 5.622914 CGTCCGGAAATACTTGTCCTAGAAA 60.623 44.000 5.23 0.00 0.00 2.52
2551 3158 4.142315 CGTCCGGAAATACTTGTCCTAGAA 60.142 45.833 5.23 0.00 0.00 2.10
2552 3159 3.379372 CGTCCGGAAATACTTGTCCTAGA 59.621 47.826 5.23 0.00 0.00 2.43
2553 3160 3.490419 CCGTCCGGAAATACTTGTCCTAG 60.490 52.174 5.23 0.00 37.50 3.02
2554 3161 2.428171 CCGTCCGGAAATACTTGTCCTA 59.572 50.000 5.23 0.00 37.50 2.94
2555 3162 1.206371 CCGTCCGGAAATACTTGTCCT 59.794 52.381 5.23 0.00 37.50 3.85
2556 3163 1.205417 TCCGTCCGGAAATACTTGTCC 59.795 52.381 5.23 0.00 42.05 4.02
2557 3164 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2558 3165 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2559 3166 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2560 3167 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2561 3168 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2562 3169 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2563 3170 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2564 3171 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2565 3172 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2566 3173 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2567 3174 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
2568 3175 0.534652 CTAGTACTCCCTCCGTCCGG 60.535 65.000 0.00 0.00 0.00 5.14
2569 3176 0.534652 CCTAGTACTCCCTCCGTCCG 60.535 65.000 0.00 0.00 0.00 4.79
2570 3177 0.550432 ACCTAGTACTCCCTCCGTCC 59.450 60.000 0.00 0.00 0.00 4.79
2571 3178 2.022934 CAACCTAGTACTCCCTCCGTC 58.977 57.143 0.00 0.00 0.00 4.79
2572 3179 1.959028 GCAACCTAGTACTCCCTCCGT 60.959 57.143 0.00 0.00 0.00 4.69
2573 3180 0.745468 GCAACCTAGTACTCCCTCCG 59.255 60.000 0.00 0.00 0.00 4.63
2574 3181 1.481363 GTGCAACCTAGTACTCCCTCC 59.519 57.143 0.00 0.00 0.00 4.30
2575 3182 2.176889 TGTGCAACCTAGTACTCCCTC 58.823 52.381 0.00 0.00 34.36 4.30
2576 3183 2.320681 TGTGCAACCTAGTACTCCCT 57.679 50.000 0.00 0.00 34.36 4.20
2577 3184 4.957684 ATATGTGCAACCTAGTACTCCC 57.042 45.455 0.00 0.00 34.36 4.30
2578 3185 6.480320 CAGAAATATGTGCAACCTAGTACTCC 59.520 42.308 0.00 0.00 34.36 3.85
2579 3186 7.042335 ACAGAAATATGTGCAACCTAGTACTC 58.958 38.462 0.00 0.00 34.36 2.59
2580 3187 6.947464 ACAGAAATATGTGCAACCTAGTACT 58.053 36.000 0.00 0.00 34.36 2.73
2581 3188 8.601476 GTTACAGAAATATGTGCAACCTAGTAC 58.399 37.037 0.00 0.00 34.36 2.73
2582 3189 8.315482 TGTTACAGAAATATGTGCAACCTAGTA 58.685 33.333 0.00 0.00 34.36 1.82
2583 3190 7.165485 TGTTACAGAAATATGTGCAACCTAGT 58.835 34.615 0.00 0.00 34.36 2.57
2935 3542 9.971922 GAAAGGATTGAATGGATAAAACTATGG 57.028 33.333 0.00 0.00 0.00 2.74
3001 3608 6.655003 TCACCTTCCAGAGTTATTTGATGTTC 59.345 38.462 0.00 0.00 0.00 3.18
3087 3694 1.799994 ACAATTTCCGCATGCAAAAGC 59.200 42.857 19.57 0.00 0.00 3.51
3088 3695 4.471157 AAACAATTTCCGCATGCAAAAG 57.529 36.364 19.57 10.78 0.00 2.27
3133 3740 6.603940 TCCCTTGATTTCATTTAAAGGTGG 57.396 37.500 0.00 0.00 36.47 4.61
3347 3964 6.041423 TGAGAGATTGCACAATACAGAGAA 57.959 37.500 0.00 0.00 0.00 2.87
3427 4044 8.470040 AATGTGCATTTACAGCTTCTAAAATG 57.530 30.769 12.30 12.30 40.59 2.32
3818 4435 8.519526 ACGATAAAAGAAGTGGATGCATAAAAA 58.480 29.630 0.00 0.00 0.00 1.94
3819 4436 8.050778 ACGATAAAAGAAGTGGATGCATAAAA 57.949 30.769 0.00 0.00 0.00 1.52
3820 4437 7.624360 ACGATAAAAGAAGTGGATGCATAAA 57.376 32.000 0.00 0.00 0.00 1.40
3821 4438 7.624360 AACGATAAAAGAAGTGGATGCATAA 57.376 32.000 0.00 0.00 0.00 1.90
3822 4439 7.624360 AAACGATAAAAGAAGTGGATGCATA 57.376 32.000 0.00 0.00 0.00 3.14
3823 4440 6.515272 AAACGATAAAAGAAGTGGATGCAT 57.485 33.333 0.00 0.00 0.00 3.96
4322 5273 3.951037 TCAAGGTGCAACTAACACACAAT 59.049 39.130 3.69 0.00 39.87 2.71
4371 5322 1.413118 AAAGCCCCAACCTGTTGAAG 58.587 50.000 11.47 3.68 42.93 3.02
4952 6568 4.765339 GCAGACCAGTAAAAACCCTTACAT 59.235 41.667 0.00 0.00 34.75 2.29
5051 6672 0.601057 GCGGCCTGTACCAATGTTTT 59.399 50.000 0.00 0.00 0.00 2.43
5063 6704 1.861542 TTCACAATTTCGGCGGCCTG 61.862 55.000 18.34 10.55 0.00 4.85
5216 6857 5.660460 ACTTCAACCAAAAATTGAGACCAC 58.340 37.500 0.00 0.00 37.38 4.16
5400 7065 6.650807 AGAACACATATCCACAGTTACAAGTG 59.349 38.462 1.81 1.81 35.56 3.16
5401 7066 6.769512 AGAACACATATCCACAGTTACAAGT 58.230 36.000 0.00 0.00 0.00 3.16
5603 7268 6.978659 GCTGTAATCAGTAATACACAGCTGTA 59.021 38.462 21.20 5.19 44.96 2.74
5659 7324 6.506538 AGGGTAATTGACTAGCAGAATGAT 57.493 37.500 0.00 0.00 39.69 2.45
5677 7342 1.697432 CCCAGTCAGTGTCAAAGGGTA 59.303 52.381 0.00 0.00 0.00 3.69
5884 7604 3.988379 TTGAACCACTTGTCAATCTGC 57.012 42.857 0.00 0.00 0.00 4.26
5926 7646 0.543277 TGCATGCCTTCCGATCTCTT 59.457 50.000 16.68 0.00 0.00 2.85
6068 7788 2.033675 TGACAGCTGAATGTTTGCAGTG 59.966 45.455 23.35 0.00 34.66 3.66
6070 7790 2.606308 GGTGACAGCTGAATGTTTGCAG 60.606 50.000 23.35 0.00 32.25 4.41
6180 7900 5.542635 AGACAGTTATACAGTCCAAGGTTGA 59.457 40.000 0.00 0.00 35.52 3.18
6233 7953 9.173021 TCAGTCAAAGTCAAAATTACTTGAGAA 57.827 29.630 0.00 0.00 37.26 2.87
6451 8171 6.424207 ACTGAAATAGTCCACTTTTCGACTTC 59.576 38.462 0.00 0.00 39.92 3.01
6482 8202 7.998580 TCTAAAACCGTTTGAATTGTAACCTT 58.001 30.769 0.00 0.00 0.00 3.50
6782 8503 5.974158 TGTGTGTTGAAAATATTTGACCACG 59.026 36.000 0.39 0.00 0.00 4.94
6919 8640 6.261826 GGAAGAAGATATGAATTGTCCACTGG 59.738 42.308 0.00 0.00 0.00 4.00
7022 8743 1.956629 ATCGTGTACCCGCCTCCTTG 61.957 60.000 0.00 0.00 0.00 3.61
7023 8744 0.396139 TATCGTGTACCCGCCTCCTT 60.396 55.000 0.00 0.00 0.00 3.36
7072 8793 3.133362 TGTCTTTGTACCTTGACTTCGGT 59.867 43.478 9.52 0.00 37.31 4.69
7103 8824 7.601856 TCTGCAAATTACCCAAGATAAACAAG 58.398 34.615 0.00 0.00 0.00 3.16
7183 8904 6.468319 CGTTAGGAGTACATTCAGTTAGAACG 59.532 42.308 0.00 0.00 39.49 3.95
7188 8909 6.579666 ACACGTTAGGAGTACATTCAGTTA 57.420 37.500 0.00 0.00 0.00 2.24
7195 8916 3.994392 CTGCAAACACGTTAGGAGTACAT 59.006 43.478 0.00 0.00 0.00 2.29
7331 9052 1.368641 TCGCATCAAAGAATGGGTCG 58.631 50.000 0.00 0.00 39.76 4.79
7337 9058 7.714377 GGATATGATAGGATCGCATCAAAGAAT 59.286 37.037 10.78 4.61 34.96 2.40
7343 9064 4.100035 GTGGGATATGATAGGATCGCATCA 59.900 45.833 9.53 9.53 44.03 3.07
7418 9139 2.169352 CACATCCAGGAAAGGATCGTCT 59.831 50.000 0.00 0.00 45.16 4.18
7902 9629 7.128883 ACTCCAACCCATTAAGACCAGTAATAT 59.871 37.037 0.00 0.00 0.00 1.28
7904 9631 5.253096 ACTCCAACCCATTAAGACCAGTAAT 59.747 40.000 0.00 0.00 0.00 1.89
8022 9750 7.340232 ACGATAATTAAACCTAGGGGGAAAAAC 59.660 37.037 14.81 0.00 38.76 2.43
8028 9756 7.094506 GCAATAACGATAATTAAACCTAGGGGG 60.095 40.741 14.81 0.00 41.89 5.40
8029 9757 7.664318 AGCAATAACGATAATTAAACCTAGGGG 59.336 37.037 14.81 0.00 38.88 4.79
8030 9758 8.617290 AGCAATAACGATAATTAAACCTAGGG 57.383 34.615 14.81 0.00 0.00 3.53
8071 9831 4.406972 AGTGTAGAGATGAATTGCCTAGCA 59.593 41.667 0.00 0.00 36.47 3.49
8072 9832 4.954875 AGTGTAGAGATGAATTGCCTAGC 58.045 43.478 0.00 0.00 0.00 3.42
8073 9833 6.403866 AGAGTGTAGAGATGAATTGCCTAG 57.596 41.667 0.00 0.00 0.00 3.02
8074 9834 7.094592 CGATAGAGTGTAGAGATGAATTGCCTA 60.095 40.741 0.00 0.00 39.76 3.93
8075 9835 6.294453 CGATAGAGTGTAGAGATGAATTGCCT 60.294 42.308 0.00 0.00 39.76 4.75
8076 9836 5.861251 CGATAGAGTGTAGAGATGAATTGCC 59.139 44.000 0.00 0.00 39.76 4.52
8077 9837 6.362016 CACGATAGAGTGTAGAGATGAATTGC 59.638 42.308 0.00 0.00 37.35 3.56
8078 9838 6.362016 GCACGATAGAGTGTAGAGATGAATTG 59.638 42.308 0.00 0.00 43.61 2.32
8079 9839 6.039829 TGCACGATAGAGTGTAGAGATGAATT 59.960 38.462 0.00 0.00 43.61 2.17
8080 9840 5.532779 TGCACGATAGAGTGTAGAGATGAAT 59.467 40.000 0.00 0.00 43.61 2.57
8081 9841 4.881850 TGCACGATAGAGTGTAGAGATGAA 59.118 41.667 0.00 0.00 43.61 2.57
8082 9842 4.451900 TGCACGATAGAGTGTAGAGATGA 58.548 43.478 0.00 0.00 43.61 2.92
8083 9843 4.820284 TGCACGATAGAGTGTAGAGATG 57.180 45.455 0.00 0.00 43.61 2.90
8089 9849 2.752903 TCAAGCTGCACGATAGAGTGTA 59.247 45.455 1.02 0.00 43.61 2.90
8090 9850 1.546029 TCAAGCTGCACGATAGAGTGT 59.454 47.619 1.02 0.00 43.61 3.55
8091 9851 2.191802 CTCAAGCTGCACGATAGAGTG 58.808 52.381 1.02 0.00 44.47 3.51
8092 9852 1.470632 GCTCAAGCTGCACGATAGAGT 60.471 52.381 1.02 0.00 37.78 3.24
8097 9857 3.886340 CTGCTCAAGCTGCACGAT 58.114 55.556 1.02 0.00 42.66 3.73
8108 9868 2.801483 TTATGCGTGGCTGCTGCTCA 62.801 55.000 15.64 8.89 39.59 4.26
8109 9869 2.108514 TTATGCGTGGCTGCTGCTC 61.109 57.895 15.64 6.34 39.59 4.26
8111 9871 2.100991 GTTATGCGTGGCTGCTGC 59.899 61.111 7.10 7.10 38.76 5.25
8130 9890 4.142609 ACCCACTGCACTATAAGATGTG 57.857 45.455 0.00 0.00 37.26 3.21
8131 9891 4.844349 AACCCACTGCACTATAAGATGT 57.156 40.909 0.00 0.00 0.00 3.06
8132 9892 5.431765 AGAAACCCACTGCACTATAAGATG 58.568 41.667 0.00 0.00 0.00 2.90
8134 9894 5.499004 AAGAAACCCACTGCACTATAAGA 57.501 39.130 0.00 0.00 0.00 2.10
8136 9896 8.545472 ACTATTAAGAAACCCACTGCACTATAA 58.455 33.333 0.00 0.00 0.00 0.98
8137 9897 7.985184 CACTATTAAGAAACCCACTGCACTATA 59.015 37.037 0.00 0.00 0.00 1.31
8138 9898 6.823689 CACTATTAAGAAACCCACTGCACTAT 59.176 38.462 0.00 0.00 0.00 2.12
8139 9899 6.170506 CACTATTAAGAAACCCACTGCACTA 58.829 40.000 0.00 0.00 0.00 2.74
8140 9900 5.003804 CACTATTAAGAAACCCACTGCACT 58.996 41.667 0.00 0.00 0.00 4.40
8141 9901 4.379499 GCACTATTAAGAAACCCACTGCAC 60.379 45.833 0.00 0.00 0.00 4.57
8142 9902 3.756434 GCACTATTAAGAAACCCACTGCA 59.244 43.478 0.00 0.00 0.00 4.41
8143 9903 4.010349 AGCACTATTAAGAAACCCACTGC 58.990 43.478 0.00 0.00 0.00 4.40
8144 9904 5.705441 TCAAGCACTATTAAGAAACCCACTG 59.295 40.000 0.00 0.00 0.00 3.66
8145 9905 5.876357 TCAAGCACTATTAAGAAACCCACT 58.124 37.500 0.00 0.00 0.00 4.00
8146 9906 5.123979 CCTCAAGCACTATTAAGAAACCCAC 59.876 44.000 0.00 0.00 0.00 4.61
8157 9917 4.042187 AGAAGTGAACCCTCAAGCACTATT 59.958 41.667 0.00 0.00 40.43 1.73
8215 9977 4.937620 TCAAACTGCTAATGTGATCACCTC 59.062 41.667 22.85 7.94 0.00 3.85
8219 9981 4.571984 CCGATCAAACTGCTAATGTGATCA 59.428 41.667 11.33 0.00 43.04 2.92
8220 9982 4.024556 CCCGATCAAACTGCTAATGTGATC 60.025 45.833 0.00 0.00 40.67 2.92
8221 9983 3.879295 CCCGATCAAACTGCTAATGTGAT 59.121 43.478 0.00 0.00 0.00 3.06
8222 9984 3.055458 TCCCGATCAAACTGCTAATGTGA 60.055 43.478 0.00 0.00 0.00 3.58
8223 9985 3.270027 TCCCGATCAAACTGCTAATGTG 58.730 45.455 0.00 0.00 0.00 3.21
8233 9995 1.463444 CTCACCGTTTCCCGATCAAAC 59.537 52.381 0.00 0.00 39.56 2.93
8247 10009 1.795286 GAACTGTCTTTGAGCTCACCG 59.205 52.381 18.03 10.56 0.00 4.94
8253 10015 1.534595 CAGCTGGAACTGTCTTTGAGC 59.465 52.381 5.57 0.00 32.78 4.26
8257 10019 0.183492 TGGCAGCTGGAACTGTCTTT 59.817 50.000 17.12 0.00 42.88 2.52
8274 10036 4.479993 CCGAAGGCTGGGAGCTGG 62.480 72.222 0.00 0.00 46.14 4.85
8287 10051 1.732941 AATTGCAGCATACGTCCGAA 58.267 45.000 0.00 0.00 0.00 4.30
8304 10068 2.887152 GGGTTTCAGAGTGCAGTGAAAT 59.113 45.455 17.38 0.00 42.91 2.17
8306 10070 1.476833 GGGGTTTCAGAGTGCAGTGAA 60.477 52.381 0.00 0.00 0.00 3.18
8321 10085 1.149854 GGACTGTTCCAACGGGGTT 59.850 57.895 3.36 0.00 42.30 4.11
8322 10086 1.350310 AAGGACTGTTCCAACGGGGT 61.350 55.000 3.36 0.00 45.72 4.95
8329 10093 0.535780 CAGCAGCAAGGACTGTTCCA 60.536 55.000 0.00 0.00 45.72 3.53
8330 10094 0.250467 TCAGCAGCAAGGACTGTTCC 60.250 55.000 0.00 0.00 43.22 3.62
8334 10099 0.250209 ACTGTCAGCAGCAAGGACTG 60.250 55.000 0.00 13.55 46.30 3.51
8368 10133 1.698506 AATTTGTTCAAGGGTCGGCA 58.301 45.000 0.00 0.00 0.00 5.69
8373 10138 2.507471 TGGCCAAAATTTGTTCAAGGGT 59.493 40.909 0.61 0.00 0.00 4.34
8396 10161 3.504906 AGTCATTGTGGCTTTGAGTGATG 59.495 43.478 0.00 0.00 0.00 3.07
8402 10167 2.158623 ACCTCAGTCATTGTGGCTTTGA 60.159 45.455 0.00 0.00 42.90 2.69
8406 10171 0.607489 GCACCTCAGTCATTGTGGCT 60.607 55.000 0.00 0.00 42.90 4.75
8407 10172 1.589716 GGCACCTCAGTCATTGTGGC 61.590 60.000 0.00 0.00 42.90 5.01
8408 10173 1.300971 CGGCACCTCAGTCATTGTGG 61.301 60.000 0.00 0.00 44.34 4.17
8409 10174 0.603707 ACGGCACCTCAGTCATTGTG 60.604 55.000 0.00 0.00 0.00 3.33
8410 10175 0.320771 GACGGCACCTCAGTCATTGT 60.321 55.000 0.00 0.00 39.30 2.71
8411 10176 1.021390 GGACGGCACCTCAGTCATTG 61.021 60.000 0.00 0.00 40.93 2.82
8412 10177 1.296715 GGACGGCACCTCAGTCATT 59.703 57.895 0.00 0.00 40.93 2.57
8413 10178 2.660064 GGGACGGCACCTCAGTCAT 61.660 63.158 0.00 0.00 40.93 3.06
8414 10179 3.311110 GGGACGGCACCTCAGTCA 61.311 66.667 0.00 0.00 40.93 3.41
8415 10180 2.997897 AGGGACGGCACCTCAGTC 60.998 66.667 0.00 0.00 38.86 3.51
8422 10187 4.436998 CACGGAGAGGGACGGCAC 62.437 72.222 0.00 0.00 0.00 5.01
8425 10190 4.135153 CAGCACGGAGAGGGACGG 62.135 72.222 0.00 0.00 0.00 4.79
8426 10191 4.803426 GCAGCACGGAGAGGGACG 62.803 72.222 0.00 0.00 0.00 4.79
8427 10192 4.459089 GGCAGCACGGAGAGGGAC 62.459 72.222 0.00 0.00 0.00 4.46
8452 10217 2.746277 CCTTGCGGAAGGGGTTCG 60.746 66.667 26.79 0.69 44.76 3.95
8459 10224 1.734465 GATTGACAGTCCTTGCGGAAG 59.266 52.381 10.08 10.08 42.08 3.46
8460 10225 1.610624 GGATTGACAGTCCTTGCGGAA 60.611 52.381 9.67 0.00 42.08 4.30
8461 10226 0.036388 GGATTGACAGTCCTTGCGGA 60.036 55.000 9.67 0.00 36.83 5.54
8462 10227 0.321564 TGGATTGACAGTCCTTGCGG 60.322 55.000 17.07 0.00 36.68 5.69
8463 10228 0.798776 GTGGATTGACAGTCCTTGCG 59.201 55.000 17.07 0.00 36.68 4.85
8464 10229 1.168714 GGTGGATTGACAGTCCTTGC 58.831 55.000 17.07 8.02 36.68 4.01
8465 10230 2.154462 GTGGTGGATTGACAGTCCTTG 58.846 52.381 17.07 0.00 36.68 3.61
8466 10231 1.073923 GGTGGTGGATTGACAGTCCTT 59.926 52.381 17.07 0.00 36.68 3.36
8467 10232 0.693049 GGTGGTGGATTGACAGTCCT 59.307 55.000 17.07 0.00 36.68 3.85
8468 10233 0.693049 AGGTGGTGGATTGACAGTCC 59.307 55.000 10.00 10.00 36.26 3.85
8469 10234 1.347707 TGAGGTGGTGGATTGACAGTC 59.652 52.381 0.00 0.00 0.00 3.51
8470 10235 1.349026 CTGAGGTGGTGGATTGACAGT 59.651 52.381 0.00 0.00 0.00 3.55
8471 10236 1.339438 CCTGAGGTGGTGGATTGACAG 60.339 57.143 0.00 0.00 0.00 3.51
8472 10237 0.692476 CCTGAGGTGGTGGATTGACA 59.308 55.000 0.00 0.00 0.00 3.58
8473 10238 0.678048 GCCTGAGGTGGTGGATTGAC 60.678 60.000 0.00 0.00 0.00 3.18
8474 10239 1.685224 GCCTGAGGTGGTGGATTGA 59.315 57.895 0.00 0.00 0.00 2.57
8475 10240 1.379044 GGCCTGAGGTGGTGGATTG 60.379 63.158 0.00 0.00 0.00 2.67
8476 10241 1.142688 AAGGCCTGAGGTGGTGGATT 61.143 55.000 5.69 0.00 0.00 3.01
8477 10242 1.542375 AAGGCCTGAGGTGGTGGAT 60.542 57.895 5.69 0.00 0.00 3.41
8478 10243 2.121963 AAGGCCTGAGGTGGTGGA 60.122 61.111 5.69 0.00 0.00 4.02
8479 10244 2.034687 CAAGGCCTGAGGTGGTGG 59.965 66.667 5.69 0.00 0.00 4.61
8480 10245 0.890996 GAACAAGGCCTGAGGTGGTG 60.891 60.000 5.69 0.14 0.00 4.17
8481 10246 1.456287 GAACAAGGCCTGAGGTGGT 59.544 57.895 5.69 0.00 0.00 4.16
8482 10247 1.672356 CGAACAAGGCCTGAGGTGG 60.672 63.158 5.69 0.00 0.00 4.61
8483 10248 1.672356 CCGAACAAGGCCTGAGGTG 60.672 63.158 5.69 2.48 0.00 4.00
8484 10249 1.705997 AACCGAACAAGGCCTGAGGT 61.706 55.000 5.69 9.14 34.18 3.85
8485 10250 0.323629 TAACCGAACAAGGCCTGAGG 59.676 55.000 5.69 8.42 33.69 3.86
8486 10251 1.439679 GTAACCGAACAAGGCCTGAG 58.560 55.000 5.69 4.64 33.69 3.35
8487 10252 0.320073 CGTAACCGAACAAGGCCTGA 60.320 55.000 5.69 0.00 35.63 3.86
8488 10253 1.908066 GCGTAACCGAACAAGGCCTG 61.908 60.000 5.69 2.82 35.63 4.85
8489 10254 1.670083 GCGTAACCGAACAAGGCCT 60.670 57.895 0.00 0.00 35.63 5.19
8490 10255 2.683859 GGCGTAACCGAACAAGGCC 61.684 63.158 0.00 0.00 37.05 5.19
8491 10256 2.683859 GGGCGTAACCGAACAAGGC 61.684 63.158 0.00 0.00 40.62 4.35
8492 10257 0.604511 AAGGGCGTAACCGAACAAGG 60.605 55.000 0.00 0.00 40.62 3.61
8493 10258 1.069500 CAAAGGGCGTAACCGAACAAG 60.069 52.381 0.00 0.00 40.62 3.16
8494 10259 0.945813 CAAAGGGCGTAACCGAACAA 59.054 50.000 0.00 0.00 40.62 2.83
8495 10260 0.106335 TCAAAGGGCGTAACCGAACA 59.894 50.000 0.00 0.00 40.62 3.18
8496 10261 1.445871 ATCAAAGGGCGTAACCGAAC 58.554 50.000 0.00 0.00 40.62 3.95
8497 10262 3.055963 TCTTATCAAAGGGCGTAACCGAA 60.056 43.478 0.00 0.00 40.62 4.30
8498 10263 2.496871 TCTTATCAAAGGGCGTAACCGA 59.503 45.455 0.00 0.00 40.62 4.69
8499 10264 2.864343 CTCTTATCAAAGGGCGTAACCG 59.136 50.000 0.00 0.00 40.62 4.44
8500 10265 3.118519 TCCTCTTATCAAAGGGCGTAACC 60.119 47.826 0.00 0.00 31.17 2.85
8501 10266 4.133013 TCCTCTTATCAAAGGGCGTAAC 57.867 45.455 0.00 0.00 31.17 2.50
8502 10267 5.123227 CAATCCTCTTATCAAAGGGCGTAA 58.877 41.667 0.00 0.00 31.17 3.18
8503 10268 4.444306 CCAATCCTCTTATCAAAGGGCGTA 60.444 45.833 0.00 0.00 31.17 4.42
8504 10269 3.545703 CAATCCTCTTATCAAAGGGCGT 58.454 45.455 0.00 0.00 31.17 5.68
8505 10270 2.880890 CCAATCCTCTTATCAAAGGGCG 59.119 50.000 0.00 0.00 31.17 6.13
8506 10271 4.140536 CTCCAATCCTCTTATCAAAGGGC 58.859 47.826 0.00 0.00 31.17 5.19
8507 10272 4.446889 CCCTCCAATCCTCTTATCAAAGGG 60.447 50.000 0.00 0.00 34.23 3.95
8508 10273 4.446889 CCCCTCCAATCCTCTTATCAAAGG 60.447 50.000 0.00 0.00 33.22 3.11
8509 10274 4.413520 TCCCCTCCAATCCTCTTATCAAAG 59.586 45.833 0.00 0.00 0.00 2.77
8510 10275 4.379875 TCCCCTCCAATCCTCTTATCAAA 58.620 43.478 0.00 0.00 0.00 2.69
8511 10276 4.021007 TCCCCTCCAATCCTCTTATCAA 57.979 45.455 0.00 0.00 0.00 2.57
8512 10277 3.724966 TCCCCTCCAATCCTCTTATCA 57.275 47.619 0.00 0.00 0.00 2.15
8513 10278 5.590976 AAATCCCCTCCAATCCTCTTATC 57.409 43.478 0.00 0.00 0.00 1.75
8514 10279 5.436374 TCAAAATCCCCTCCAATCCTCTTAT 59.564 40.000 0.00 0.00 0.00 1.73
8515 10280 4.793520 TCAAAATCCCCTCCAATCCTCTTA 59.206 41.667 0.00 0.00 0.00 2.10
8516 10281 3.597868 TCAAAATCCCCTCCAATCCTCTT 59.402 43.478 0.00 0.00 0.00 2.85
8517 10282 3.053320 GTCAAAATCCCCTCCAATCCTCT 60.053 47.826 0.00 0.00 0.00 3.69
8518 10283 3.053320 AGTCAAAATCCCCTCCAATCCTC 60.053 47.826 0.00 0.00 0.00 3.71
8519 10284 2.929043 AGTCAAAATCCCCTCCAATCCT 59.071 45.455 0.00 0.00 0.00 3.24
8520 10285 3.388552 AGTCAAAATCCCCTCCAATCC 57.611 47.619 0.00 0.00 0.00 3.01
8521 10286 3.118992 GCAAGTCAAAATCCCCTCCAATC 60.119 47.826 0.00 0.00 0.00 2.67
8522 10287 2.833943 GCAAGTCAAAATCCCCTCCAAT 59.166 45.455 0.00 0.00 0.00 3.16
8523 10288 2.247358 GCAAGTCAAAATCCCCTCCAA 58.753 47.619 0.00 0.00 0.00 3.53
8524 10289 1.146774 TGCAAGTCAAAATCCCCTCCA 59.853 47.619 0.00 0.00 0.00 3.86
8525 10290 1.821136 CTGCAAGTCAAAATCCCCTCC 59.179 52.381 0.00 0.00 0.00 4.30
8526 10291 2.751806 CTCTGCAAGTCAAAATCCCCTC 59.248 50.000 0.00 0.00 33.76 4.30
8527 10292 2.556114 CCTCTGCAAGTCAAAATCCCCT 60.556 50.000 0.00 0.00 33.76 4.79
8528 10293 1.821136 CCTCTGCAAGTCAAAATCCCC 59.179 52.381 0.00 0.00 33.76 4.81
8529 10294 2.795329 TCCTCTGCAAGTCAAAATCCC 58.205 47.619 0.00 0.00 33.76 3.85
8530 10295 6.515272 TTAATCCTCTGCAAGTCAAAATCC 57.485 37.500 0.00 0.00 33.76 3.01
8531 10296 8.246180 TGATTTAATCCTCTGCAAGTCAAAATC 58.754 33.333 2.22 0.00 33.76 2.17
8532 10297 8.125978 TGATTTAATCCTCTGCAAGTCAAAAT 57.874 30.769 2.22 0.00 33.76 1.82
8533 10298 7.523293 TGATTTAATCCTCTGCAAGTCAAAA 57.477 32.000 2.22 0.00 33.76 2.44
8534 10299 7.370383 GTTGATTTAATCCTCTGCAAGTCAAA 58.630 34.615 2.22 0.00 31.27 2.69
8535 10300 6.071952 GGTTGATTTAATCCTCTGCAAGTCAA 60.072 38.462 2.22 0.00 33.76 3.18
8536 10301 5.415701 GGTTGATTTAATCCTCTGCAAGTCA 59.584 40.000 2.22 0.00 33.76 3.41
8537 10302 5.649831 AGGTTGATTTAATCCTCTGCAAGTC 59.350 40.000 2.22 0.00 33.76 3.01
8538 10303 5.574188 AGGTTGATTTAATCCTCTGCAAGT 58.426 37.500 2.22 0.00 33.76 3.16
8539 10304 5.649395 TGAGGTTGATTTAATCCTCTGCAAG 59.351 40.000 11.00 0.00 44.57 4.01
8540 10305 5.569355 TGAGGTTGATTTAATCCTCTGCAA 58.431 37.500 11.00 0.00 44.57 4.08
8541 10306 5.178096 TGAGGTTGATTTAATCCTCTGCA 57.822 39.130 11.00 0.00 44.57 4.41
8542 10307 6.238869 GGATTGAGGTTGATTTAATCCTCTGC 60.239 42.308 11.00 3.09 44.57 4.26
8543 10308 6.264067 GGGATTGAGGTTGATTTAATCCTCTG 59.736 42.308 12.44 0.00 43.87 3.35
8544 10309 6.161170 AGGGATTGAGGTTGATTTAATCCTCT 59.839 38.462 12.44 6.79 43.87 3.69
8545 10310 6.264067 CAGGGATTGAGGTTGATTTAATCCTC 59.736 42.308 12.44 3.66 43.87 3.71
8546 10311 6.131961 CAGGGATTGAGGTTGATTTAATCCT 58.868 40.000 12.44 0.00 43.87 3.24
8547 10312 5.221322 GCAGGGATTGAGGTTGATTTAATCC 60.221 44.000 2.22 0.00 43.74 3.01
8548 10313 5.221322 GGCAGGGATTGAGGTTGATTTAATC 60.221 44.000 0.00 0.00 0.00 1.75
8549 10314 4.651045 GGCAGGGATTGAGGTTGATTTAAT 59.349 41.667 0.00 0.00 0.00 1.40
8550 10315 4.023291 GGCAGGGATTGAGGTTGATTTAA 58.977 43.478 0.00 0.00 0.00 1.52
8551 10316 3.011144 TGGCAGGGATTGAGGTTGATTTA 59.989 43.478 0.00 0.00 0.00 1.40
8552 10317 2.225343 TGGCAGGGATTGAGGTTGATTT 60.225 45.455 0.00 0.00 0.00 2.17
8553 10318 1.358787 TGGCAGGGATTGAGGTTGATT 59.641 47.619 0.00 0.00 0.00 2.57
8554 10319 1.002069 TGGCAGGGATTGAGGTTGAT 58.998 50.000 0.00 0.00 0.00 2.57
8555 10320 0.776810 TTGGCAGGGATTGAGGTTGA 59.223 50.000 0.00 0.00 0.00 3.18
8556 10321 1.631405 TTTGGCAGGGATTGAGGTTG 58.369 50.000 0.00 0.00 0.00 3.77
8557 10322 1.970640 GTTTTGGCAGGGATTGAGGTT 59.029 47.619 0.00 0.00 0.00 3.50
8558 10323 1.632589 GTTTTGGCAGGGATTGAGGT 58.367 50.000 0.00 0.00 0.00 3.85
8559 10324 0.897621 GGTTTTGGCAGGGATTGAGG 59.102 55.000 0.00 0.00 0.00 3.86
8560 10325 0.527565 CGGTTTTGGCAGGGATTGAG 59.472 55.000 0.00 0.00 0.00 3.02
8561 10326 0.178975 ACGGTTTTGGCAGGGATTGA 60.179 50.000 0.00 0.00 0.00 2.57
8562 10327 0.678950 AACGGTTTTGGCAGGGATTG 59.321 50.000 0.00 0.00 0.00 2.67
8563 10328 0.678950 CAACGGTTTTGGCAGGGATT 59.321 50.000 0.00 0.00 0.00 3.01
8564 10329 1.815817 GCAACGGTTTTGGCAGGGAT 61.816 55.000 0.00 0.00 0.00 3.85
8565 10330 2.494530 GCAACGGTTTTGGCAGGGA 61.495 57.895 0.00 0.00 0.00 4.20
8566 10331 2.028925 GCAACGGTTTTGGCAGGG 59.971 61.111 0.00 0.00 0.00 4.45
8567 10332 1.591327 GTGCAACGGTTTTGGCAGG 60.591 57.895 4.79 0.00 36.86 4.85
8568 10333 0.459237 TTGTGCAACGGTTTTGGCAG 60.459 50.000 4.79 0.00 42.39 4.85
8569 10334 0.737715 GTTGTGCAACGGTTTTGGCA 60.738 50.000 0.75 0.75 42.39 4.92
8570 10335 1.425267 GGTTGTGCAACGGTTTTGGC 61.425 55.000 8.70 0.00 42.39 4.52
8571 10336 0.808060 GGGTTGTGCAACGGTTTTGG 60.808 55.000 8.70 0.00 42.39 3.28
8572 10337 0.174617 AGGGTTGTGCAACGGTTTTG 59.825 50.000 8.70 0.00 42.39 2.44
8573 10338 0.174617 CAGGGTTGTGCAACGGTTTT 59.825 50.000 8.70 0.00 42.39 2.43
8574 10339 0.968393 ACAGGGTTGTGCAACGGTTT 60.968 50.000 8.70 0.00 42.39 3.27
8575 10340 1.379309 ACAGGGTTGTGCAACGGTT 60.379 52.632 8.70 0.00 42.39 4.44
8576 10341 1.822186 GACAGGGTTGTGCAACGGT 60.822 57.895 8.70 7.05 42.39 4.83
8577 10342 1.785041 CTGACAGGGTTGTGCAACGG 61.785 60.000 8.70 4.31 42.39 4.44
8578 10343 1.648720 CTGACAGGGTTGTGCAACG 59.351 57.895 8.70 0.00 42.39 4.10
8579 10344 1.360192 GCTGACAGGGTTGTGCAAC 59.640 57.895 4.26 6.52 37.76 4.17
8580 10345 1.827789 GGCTGACAGGGTTGTGCAA 60.828 57.895 4.26 0.00 37.76 4.08
8581 10346 2.203337 GGCTGACAGGGTTGTGCA 60.203 61.111 4.26 0.00 37.76 4.57
8582 10347 3.357079 CGGCTGACAGGGTTGTGC 61.357 66.667 4.26 0.00 37.76 4.57
8583 10348 1.227823 TTCGGCTGACAGGGTTGTG 60.228 57.895 4.26 0.00 37.76 3.33
8584 10349 1.227853 GTTCGGCTGACAGGGTTGT 60.228 57.895 4.26 0.00 41.18 3.32
8585 10350 1.227823 TGTTCGGCTGACAGGGTTG 60.228 57.895 4.26 0.00 0.00 3.77
8586 10351 1.227853 GTGTTCGGCTGACAGGGTT 60.228 57.895 4.26 0.00 0.00 4.11
8587 10352 2.383245 CTGTGTTCGGCTGACAGGGT 62.383 60.000 4.26 0.00 34.63 4.34
8588 10353 1.669115 CTGTGTTCGGCTGACAGGG 60.669 63.158 4.26 0.00 34.63 4.45
8589 10354 2.320587 GCTGTGTTCGGCTGACAGG 61.321 63.158 13.17 4.99 42.20 4.00
8590 10355 2.320587 GGCTGTGTTCGGCTGACAG 61.321 63.158 8.20 8.20 44.62 3.51
8591 10356 2.280797 GGCTGTGTTCGGCTGACA 60.281 61.111 0.00 0.00 44.62 3.58
8592 10357 2.029844 GAGGCTGTGTTCGGCTGAC 61.030 63.158 0.00 0.00 44.62 3.51
8593 10358 2.343758 GAGGCTGTGTTCGGCTGA 59.656 61.111 0.00 0.00 44.62 4.26
8594 10359 2.031012 TGAGGCTGTGTTCGGCTG 59.969 61.111 0.00 0.00 44.62 4.85
8595 10360 2.345244 CTGAGGCTGTGTTCGGCT 59.655 61.111 0.00 0.00 44.62 5.52
8596 10361 2.743928 CCTGAGGCTGTGTTCGGC 60.744 66.667 0.00 0.00 44.51 5.54
8597 10362 2.743928 GCCTGAGGCTGTGTTCGG 60.744 66.667 17.96 0.00 46.69 4.30
8607 10372 1.967066 CCCACTATGACTAGCCTGAGG 59.033 57.143 0.00 0.00 0.00 3.86
8608 10373 1.967066 CCCCACTATGACTAGCCTGAG 59.033 57.143 0.00 0.00 0.00 3.35
8609 10374 1.291033 ACCCCACTATGACTAGCCTGA 59.709 52.381 0.00 0.00 0.00 3.86
8610 10375 1.794714 ACCCCACTATGACTAGCCTG 58.205 55.000 0.00 0.00 0.00 4.85
8611 10376 3.052033 AGTTACCCCACTATGACTAGCCT 60.052 47.826 0.00 0.00 0.00 4.58
8612 10377 3.306613 AGTTACCCCACTATGACTAGCC 58.693 50.000 0.00 0.00 0.00 3.93
8613 10378 5.832060 TCTAAGTTACCCCACTATGACTAGC 59.168 44.000 0.00 0.00 0.00 3.42
8614 10379 9.233649 CTATCTAAGTTACCCCACTATGACTAG 57.766 40.741 0.00 0.00 0.00 2.57
8615 10380 8.730948 ACTATCTAAGTTACCCCACTATGACTA 58.269 37.037 0.00 0.00 33.35 2.59
8616 10381 7.593653 ACTATCTAAGTTACCCCACTATGACT 58.406 38.462 0.00 0.00 33.35 3.41
8617 10382 7.836479 ACTATCTAAGTTACCCCACTATGAC 57.164 40.000 0.00 0.00 33.35 3.06
8618 10383 9.359653 GTTACTATCTAAGTTACCCCACTATGA 57.640 37.037 0.00 0.00 39.80 2.15
8619 10384 9.364653 AGTTACTATCTAAGTTACCCCACTATG 57.635 37.037 0.00 0.00 38.28 2.23
8620 10385 9.948747 AAGTTACTATCTAAGTTACCCCACTAT 57.051 33.333 0.00 0.00 38.28 2.12
8622 10387 9.774071 TTAAGTTACTATCTAAGTTACCCCACT 57.226 33.333 0.00 0.00 38.28 4.00
8623 10388 9.809096 GTTAAGTTACTATCTAAGTTACCCCAC 57.191 37.037 0.00 0.00 38.28 4.61
8624 10389 9.545928 TGTTAAGTTACTATCTAAGTTACCCCA 57.454 33.333 0.00 0.00 38.28 4.96
8625 10390 9.809096 GTGTTAAGTTACTATCTAAGTTACCCC 57.191 37.037 0.00 0.00 38.28 4.95
8631 10396 9.263446 TGGGATGTGTTAAGTTACTATCTAAGT 57.737 33.333 0.00 0.00 42.62 2.24
8634 10399 9.483489 TCTTGGGATGTGTTAAGTTACTATCTA 57.517 33.333 0.00 0.00 0.00 1.98
8635 10400 8.375493 TCTTGGGATGTGTTAAGTTACTATCT 57.625 34.615 0.00 0.00 0.00 1.98
8639 10404 9.975218 AATTATCTTGGGATGTGTTAAGTTACT 57.025 29.630 0.00 0.00 33.71 2.24
8642 10407 9.927668 CAAAATTATCTTGGGATGTGTTAAGTT 57.072 29.630 0.00 0.00 33.71 2.66
8643 10408 8.034804 GCAAAATTATCTTGGGATGTGTTAAGT 58.965 33.333 0.00 0.00 33.71 2.24
8644 10409 8.253113 AGCAAAATTATCTTGGGATGTGTTAAG 58.747 33.333 0.00 0.00 33.71 1.85
8645 10410 8.133024 AGCAAAATTATCTTGGGATGTGTTAA 57.867 30.769 0.00 0.00 33.71 2.01
8646 10411 7.716799 AGCAAAATTATCTTGGGATGTGTTA 57.283 32.000 0.00 0.00 33.71 2.41
8647 10412 6.610075 AGCAAAATTATCTTGGGATGTGTT 57.390 33.333 0.00 0.00 33.71 3.32
8648 10413 6.014327 ACAAGCAAAATTATCTTGGGATGTGT 60.014 34.615 14.65 0.00 40.93 3.72
8649 10414 6.311935 CACAAGCAAAATTATCTTGGGATGTG 59.688 38.462 14.65 0.00 42.23 3.21
8650 10415 6.014327 ACACAAGCAAAATTATCTTGGGATGT 60.014 34.615 17.86 10.82 42.23 3.06
8651 10416 6.311935 CACACAAGCAAAATTATCTTGGGATG 59.688 38.462 17.86 11.11 42.23 3.51
8652 10417 6.400568 CACACAAGCAAAATTATCTTGGGAT 58.599 36.000 17.86 5.33 42.23 3.85
8653 10418 5.279406 CCACACAAGCAAAATTATCTTGGGA 60.279 40.000 17.86 0.00 42.23 4.37
8654 10419 4.931002 CCACACAAGCAAAATTATCTTGGG 59.069 41.667 12.29 12.29 44.43 4.12
8655 10420 4.389687 GCCACACAAGCAAAATTATCTTGG 59.610 41.667 14.65 8.77 40.93 3.61
8656 10421 4.989797 TGCCACACAAGCAAAATTATCTTG 59.010 37.500 10.76 10.76 41.99 3.02
8657 10422 5.212532 TGCCACACAAGCAAAATTATCTT 57.787 34.783 0.00 0.00 37.28 2.40
8658 10423 4.870123 TGCCACACAAGCAAAATTATCT 57.130 36.364 0.00 0.00 37.28 1.98
8667 10432 5.242615 TCATTAAATAGTTGCCACACAAGCA 59.757 36.000 0.00 0.00 39.50 3.91
8668 10433 5.708948 TCATTAAATAGTTGCCACACAAGC 58.291 37.500 0.00 0.00 39.50 4.01
8669 10434 6.150976 TCCTCATTAAATAGTTGCCACACAAG 59.849 38.462 0.00 0.00 39.50 3.16
8670 10435 6.007076 TCCTCATTAAATAGTTGCCACACAA 58.993 36.000 0.00 0.00 35.33 3.33
8671 10436 5.565509 TCCTCATTAAATAGTTGCCACACA 58.434 37.500 0.00 0.00 0.00 3.72
8672 10437 6.509418 TTCCTCATTAAATAGTTGCCACAC 57.491 37.500 0.00 0.00 0.00 3.82
8673 10438 6.945435 TCTTTCCTCATTAAATAGTTGCCACA 59.055 34.615 0.00 0.00 0.00 4.17
8674 10439 7.391148 TCTTTCCTCATTAAATAGTTGCCAC 57.609 36.000 0.00 0.00 0.00 5.01
8675 10440 6.603201 CCTCTTTCCTCATTAAATAGTTGCCA 59.397 38.462 0.00 0.00 0.00 4.92
8676 10441 6.603599 ACCTCTTTCCTCATTAAATAGTTGCC 59.396 38.462 0.00 0.00 0.00 4.52
8677 10442 7.475840 CACCTCTTTCCTCATTAAATAGTTGC 58.524 38.462 0.00 0.00 0.00 4.17
8678 10443 7.475840 GCACCTCTTTCCTCATTAAATAGTTG 58.524 38.462 0.00 0.00 0.00 3.16
8679 10444 7.631717 GCACCTCTTTCCTCATTAAATAGTT 57.368 36.000 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.