Multiple sequence alignment - TraesCS6D01G105500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G105500 chr6D 100.000 9149 0 0 1 9149 68905135 68914283 0.000000e+00 16896.0
1 TraesCS6D01G105500 chr6B 95.733 3234 71 15 2828 6059 143995825 143998993 0.000000e+00 5145.0
2 TraesCS6D01G105500 chr6B 94.335 2542 57 26 6053 8571 143999028 144001505 0.000000e+00 3816.0
3 TraesCS6D01G105500 chr6B 89.950 1791 95 31 625 2389 143993778 143995509 0.000000e+00 2231.0
4 TraesCS6D01G105500 chr6B 96.831 284 6 3 2388 2669 143995545 143995827 1.080000e-128 472.0
5 TraesCS6D01G105500 chr6B 98.291 117 1 1 9034 9149 144001998 144002114 4.330000e-48 204.0
6 TraesCS6D01G105500 chr6B 79.295 227 28 14 8564 8781 144001523 144001739 3.440000e-29 141.0
7 TraesCS6D01G105500 chr6B 77.682 233 36 9 8807 9037 144001733 144001951 2.680000e-25 128.0
8 TraesCS6D01G105500 chr6A 90.878 3212 127 59 2857 6059 87244537 87247591 0.000000e+00 4156.0
9 TraesCS6D01G105500 chr6A 95.309 1620 55 10 6959 8564 87248298 87249910 0.000000e+00 2551.0
10 TraesCS6D01G105500 chr6A 91.468 1758 87 25 560 2291 87242508 87244228 0.000000e+00 2357.0
11 TraesCS6D01G105500 chr6A 90.166 661 33 8 6071 6731 87247655 87248283 0.000000e+00 832.0
12 TraesCS6D01G105500 chr6A 90.129 233 15 4 2444 2669 87244244 87244475 6.950000e-76 296.0
13 TraesCS6D01G105500 chr6A 97.633 169 2 1 2667 2833 105042076 105041908 1.160000e-73 289.0
14 TraesCS6D01G105500 chr6A 80.952 273 25 10 1 254 87242236 87242500 3.370000e-44 191.0
15 TraesCS6D01G105500 chr6A 90.000 60 2 2 8969 9028 87250233 87250288 3.540000e-09 75.0
16 TraesCS6D01G105500 chr5A 97.126 174 3 1 2667 2838 429513630 429513457 8.990000e-75 292.0
17 TraesCS6D01G105500 chr2A 96.571 175 4 1 2664 2836 746756986 746757160 1.160000e-73 289.0
18 TraesCS6D01G105500 chr2A 87.129 101 12 1 312 412 197253345 197253444 7.510000e-21 113.0
19 TraesCS6D01G105500 chr4A 97.619 168 2 1 2665 2830 582530144 582529977 4.180000e-73 287.0
20 TraesCS6D01G105500 chr4A 93.846 65 4 0 9085 9149 9630591 9630655 2.100000e-16 99.0
21 TraesCS6D01G105500 chr1D 96.067 178 4 2 2660 2834 238940388 238940211 4.180000e-73 287.0
22 TraesCS6D01G105500 chr1D 98.462 65 1 0 9085 9149 439355646 439355710 2.090000e-21 115.0
23 TraesCS6D01G105500 chr1D 95.385 65 3 0 9085 9149 64330984 64331048 4.520000e-18 104.0
24 TraesCS6D01G105500 chr3A 96.532 173 4 1 2661 2831 264047573 264047745 1.500000e-72 285.0
25 TraesCS6D01G105500 chr3A 97.778 45 1 0 9085 9129 714783035 714783079 2.740000e-10 78.7
26 TraesCS6D01G105500 chr2D 96.512 172 5 1 2668 2839 576955386 576955556 5.410000e-72 283.0
27 TraesCS6D01G105500 chr4D 94.536 183 6 3 2661 2841 93338035 93338215 7.000000e-71 279.0
28 TraesCS6D01G105500 chr4D 94.972 179 6 2 2665 2841 477898792 477898969 2.520000e-70 278.0
29 TraesCS6D01G105500 chr3B 85.470 117 15 2 1173 1289 39229951 39229837 4.490000e-23 121.0
30 TraesCS6D01G105500 chr3D 98.462 65 1 0 9085 9149 579682922 579682986 2.090000e-21 115.0
31 TraesCS6D01G105500 chr1B 98.462 65 1 0 9085 9149 596170451 596170515 2.090000e-21 115.0
32 TraesCS6D01G105500 chr7D 74.915 295 49 16 1819 2095 532257338 532257625 2.700000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G105500 chr6D 68905135 68914283 9148 False 16896.000000 16896 100.000000 1 9149 1 chr6D.!!$F1 9148
1 TraesCS6D01G105500 chr6B 143993778 144002114 8336 False 1733.857143 5145 90.302429 625 9149 7 chr6B.!!$F1 8524
2 TraesCS6D01G105500 chr6A 87242236 87250288 8052 False 1494.000000 4156 89.843143 1 9028 7 chr6A.!!$F1 9027

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 511 0.245266 TACGTGATCAGAAAGCCGCA 59.755 50.000 0.00 0.0 0.00 5.69 F
493 512 0.391661 ACGTGATCAGAAAGCCGCAT 60.392 50.000 0.00 0.0 0.00 4.73 F
494 513 0.729116 CGTGATCAGAAAGCCGCATT 59.271 50.000 0.00 0.0 0.00 3.56 F
1517 1563 0.463620 GGCTCTAGTTCTGGCCTCTG 59.536 60.000 3.32 0.0 41.20 3.35 F
2112 2170 0.625316 TGTGCCTGCCATGTTCCTAT 59.375 50.000 0.00 0.0 0.00 2.57 F
2245 2303 1.071542 TCTGAAGGCGACATTGGTTCA 59.928 47.619 0.00 0.0 0.00 3.18 F
2682 2785 2.019807 TTTGTACTCCCTCCGTTCCT 57.980 50.000 0.00 0.0 0.00 3.36 F
3914 4083 2.099098 CGCCTTGTTGGTTTTCTTGTCT 59.901 45.455 0.00 0.0 38.35 3.41 F
4634 4805 1.032657 TCTCTCCTCGCTTTCCCTCG 61.033 60.000 0.00 0.0 0.00 4.63 F
5567 5738 0.178861 TGCTTCCTCTCCCCCTCTTT 60.179 55.000 0.00 0.0 0.00 2.52 F
5568 5739 0.254462 GCTTCCTCTCCCCCTCTTTG 59.746 60.000 0.00 0.0 0.00 2.77 F
6106 6371 1.140052 TCGCCCAGTCTTTTGTGAAGA 59.860 47.619 0.00 0.0 0.00 2.87 F
6878 7148 1.353694 AGAGATTGCTGGTCCTTGCTT 59.646 47.619 8.49 0.0 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1362 1408 0.107654 GTCCCAGCAGGCGAATAAGT 60.108 55.000 0.00 0.00 34.51 2.24 R
1372 1418 0.617413 AATCTGTGAGGTCCCAGCAG 59.383 55.000 0.00 0.00 0.00 4.24 R
1851 1907 1.078759 GCTTCGGGACAGACGTCATG 61.079 60.000 19.50 14.94 44.54 3.07 R
2967 3108 0.318699 GTTCCAACCTGGCGCTTTTC 60.319 55.000 7.64 0.00 37.47 2.29 R
3280 3425 0.387239 GCCGATGTCCAAAACAGCAC 60.387 55.000 0.00 0.00 44.69 4.40 R
3531 3698 2.229784 CTCCTGTTGTTGGAAAGATGCC 59.770 50.000 0.00 0.00 32.61 4.40 R
4624 4795 1.002011 AGGGAAAGCGAGGGAAAGC 60.002 57.895 0.00 0.00 0.00 3.51 R
4735 4906 1.205893 GAGGAGAGCTCACGGTCAAAT 59.794 52.381 17.77 0.00 40.07 2.32 R
5828 5999 1.550976 GGGTCTCCCAATATAGCCGAG 59.449 57.143 0.00 0.00 44.65 4.63 R
6946 7216 1.134220 ACAACTGGCGAAGTCCTTTGA 60.134 47.619 0.00 0.00 38.56 2.69 R
6948 7218 2.052782 AACAACTGGCGAAGTCCTTT 57.947 45.000 0.00 0.00 38.56 3.11 R
7618 7891 1.276421 AGAACAGTGACAATCCCTCCG 59.724 52.381 0.00 0.00 0.00 4.63 R
8726 9059 0.107017 ATCCCTCCAATGCTCAACCG 60.107 55.000 0.00 0.00 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.287525 CAAATCTAGGAAAAACTGGGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
38 39 2.071778 ACTGGGCAAAAGCTGAAAGA 57.928 45.000 0.00 0.00 34.07 2.52
68 78 4.340617 ACATCTAAAATCCGGAAAGGCAA 58.659 39.130 9.01 0.00 40.77 4.52
100 113 0.314935 CAAGGAAACGCCAAGCACAT 59.685 50.000 0.00 0.00 40.02 3.21
106 122 0.881118 AACGCCAAGCACATAAGTGG 59.119 50.000 0.00 0.00 45.98 4.00
108 124 1.137404 GCCAAGCACATAAGTGGCG 59.863 57.895 0.00 0.00 46.48 5.69
125 141 4.129737 GGCGGCTGAGAGCGTGTA 62.130 66.667 0.00 0.00 43.62 2.90
127 143 2.161486 GCGGCTGAGAGCGTGTAAG 61.161 63.158 0.00 0.00 43.62 2.34
128 144 1.213013 CGGCTGAGAGCGTGTAAGT 59.787 57.895 0.00 0.00 43.62 2.24
129 145 1.073216 CGGCTGAGAGCGTGTAAGTG 61.073 60.000 0.00 0.00 43.62 3.16
155 172 1.888018 CAAGGCTCTGCAATGGGTG 59.112 57.895 0.00 0.00 0.00 4.61
194 213 2.499685 GGCACCGCTCCGTTAGAT 59.500 61.111 0.00 0.00 0.00 1.98
195 214 1.883084 GGCACCGCTCCGTTAGATG 60.883 63.158 0.00 0.00 0.00 2.90
197 216 1.141881 CACCGCTCCGTTAGATGCT 59.858 57.895 0.00 0.00 0.00 3.79
198 217 0.872021 CACCGCTCCGTTAGATGCTC 60.872 60.000 0.00 0.00 0.00 4.26
199 218 1.038130 ACCGCTCCGTTAGATGCTCT 61.038 55.000 0.00 0.00 0.00 4.09
200 219 0.318275 CCGCTCCGTTAGATGCTCTC 60.318 60.000 0.00 0.00 0.00 3.20
201 220 0.658829 CGCTCCGTTAGATGCTCTCG 60.659 60.000 0.00 0.00 0.00 4.04
202 221 0.663688 GCTCCGTTAGATGCTCTCGA 59.336 55.000 0.00 0.00 0.00 4.04
203 222 1.268352 GCTCCGTTAGATGCTCTCGAT 59.732 52.381 0.00 0.00 0.00 3.59
204 223 2.920227 GCTCCGTTAGATGCTCTCGATG 60.920 54.545 0.00 0.00 0.00 3.84
216 235 0.964700 TCTCGATGGATGCTAGCCTG 59.035 55.000 13.29 0.00 0.00 4.85
248 267 3.627218 GTAGCATTCGCGCCCGAC 61.627 66.667 0.00 0.00 44.30 4.79
267 286 3.394836 GGCTCCTCTCGCCTGGTT 61.395 66.667 0.00 0.00 44.17 3.67
268 287 2.058595 GGCTCCTCTCGCCTGGTTA 61.059 63.158 0.00 0.00 44.17 2.85
269 288 1.439644 GCTCCTCTCGCCTGGTTAG 59.560 63.158 0.00 0.00 0.00 2.34
270 289 1.324005 GCTCCTCTCGCCTGGTTAGT 61.324 60.000 0.00 0.00 0.00 2.24
271 290 1.187087 CTCCTCTCGCCTGGTTAGTT 58.813 55.000 0.00 0.00 0.00 2.24
272 291 2.376109 CTCCTCTCGCCTGGTTAGTTA 58.624 52.381 0.00 0.00 0.00 2.24
273 292 2.097825 TCCTCTCGCCTGGTTAGTTAC 58.902 52.381 0.00 0.00 0.00 2.50
274 293 2.100989 CCTCTCGCCTGGTTAGTTACT 58.899 52.381 0.00 0.00 0.00 2.24
275 294 3.054139 TCCTCTCGCCTGGTTAGTTACTA 60.054 47.826 0.00 0.00 0.00 1.82
276 295 3.890147 CCTCTCGCCTGGTTAGTTACTAT 59.110 47.826 0.00 0.00 0.00 2.12
277 296 4.261656 CCTCTCGCCTGGTTAGTTACTATG 60.262 50.000 0.00 0.00 0.00 2.23
278 297 4.529897 TCTCGCCTGGTTAGTTACTATGA 58.470 43.478 0.00 0.00 0.00 2.15
279 298 4.951715 TCTCGCCTGGTTAGTTACTATGAA 59.048 41.667 0.00 0.00 0.00 2.57
280 299 5.419788 TCTCGCCTGGTTAGTTACTATGAAA 59.580 40.000 0.00 0.00 0.00 2.69
281 300 5.657474 TCGCCTGGTTAGTTACTATGAAAG 58.343 41.667 0.00 0.00 0.00 2.62
282 301 5.419788 TCGCCTGGTTAGTTACTATGAAAGA 59.580 40.000 0.00 0.00 0.00 2.52
283 302 6.071221 TCGCCTGGTTAGTTACTATGAAAGAA 60.071 38.462 0.00 0.00 0.00 2.52
284 303 6.592607 CGCCTGGTTAGTTACTATGAAAGAAA 59.407 38.462 0.00 0.00 0.00 2.52
285 304 7.201530 CGCCTGGTTAGTTACTATGAAAGAAAG 60.202 40.741 0.00 0.00 0.00 2.62
286 305 7.065923 GCCTGGTTAGTTACTATGAAAGAAAGG 59.934 40.741 0.00 0.00 0.00 3.11
287 306 7.065923 CCTGGTTAGTTACTATGAAAGAAAGGC 59.934 40.741 0.00 0.00 0.00 4.35
288 307 6.882678 TGGTTAGTTACTATGAAAGAAAGGCC 59.117 38.462 0.00 0.00 0.00 5.19
289 308 7.110810 GGTTAGTTACTATGAAAGAAAGGCCT 58.889 38.462 0.00 0.00 0.00 5.19
290 309 7.610692 GGTTAGTTACTATGAAAGAAAGGCCTT 59.389 37.037 13.78 13.78 0.00 4.35
291 310 8.666573 GTTAGTTACTATGAAAGAAAGGCCTTC 58.333 37.037 20.79 12.47 0.00 3.46
292 311 7.021998 AGTTACTATGAAAGAAAGGCCTTCT 57.978 36.000 20.79 14.65 46.92 2.85
293 312 7.106890 AGTTACTATGAAAGAAAGGCCTTCTC 58.893 38.462 20.79 17.62 44.00 2.87
294 313 5.770685 ACTATGAAAGAAAGGCCTTCTCT 57.229 39.130 20.79 19.52 44.00 3.10
295 314 6.133253 ACTATGAAAGAAAGGCCTTCTCTT 57.867 37.500 25.08 25.08 44.00 2.85
296 315 5.942826 ACTATGAAAGAAAGGCCTTCTCTTG 59.057 40.000 28.42 21.54 44.00 3.02
297 316 3.490348 TGAAAGAAAGGCCTTCTCTTGG 58.510 45.455 28.42 0.00 44.00 3.61
298 317 3.117512 TGAAAGAAAGGCCTTCTCTTGGT 60.118 43.478 28.42 20.05 44.00 3.67
299 318 4.104102 TGAAAGAAAGGCCTTCTCTTGGTA 59.896 41.667 28.42 19.87 44.00 3.25
300 319 4.936685 AAGAAAGGCCTTCTCTTGGTAT 57.063 40.909 27.74 10.31 44.00 2.73
301 320 4.936685 AGAAAGGCCTTCTCTTGGTATT 57.063 40.909 20.79 0.00 40.61 1.89
302 321 5.262455 AGAAAGGCCTTCTCTTGGTATTT 57.738 39.130 20.79 0.00 40.61 1.40
303 322 5.012893 AGAAAGGCCTTCTCTTGGTATTTG 58.987 41.667 20.79 0.00 40.61 2.32
304 323 2.728007 AGGCCTTCTCTTGGTATTTGC 58.272 47.619 0.00 0.00 0.00 3.68
305 324 2.310052 AGGCCTTCTCTTGGTATTTGCT 59.690 45.455 0.00 0.00 0.00 3.91
306 325 3.523564 AGGCCTTCTCTTGGTATTTGCTA 59.476 43.478 0.00 0.00 0.00 3.49
307 326 4.166919 AGGCCTTCTCTTGGTATTTGCTAT 59.833 41.667 0.00 0.00 0.00 2.97
308 327 4.889995 GGCCTTCTCTTGGTATTTGCTATT 59.110 41.667 0.00 0.00 0.00 1.73
309 328 5.009110 GGCCTTCTCTTGGTATTTGCTATTC 59.991 44.000 0.00 0.00 0.00 1.75
310 329 5.590259 GCCTTCTCTTGGTATTTGCTATTCA 59.410 40.000 0.00 0.00 0.00 2.57
311 330 6.095440 GCCTTCTCTTGGTATTTGCTATTCAA 59.905 38.462 0.00 0.00 0.00 2.69
313 332 8.522830 CCTTCTCTTGGTATTTGCTATTCAAAA 58.477 33.333 0.00 0.00 46.60 2.44
325 344 8.925161 TTTGCTATTCAAAATAAATTCGAGGG 57.075 30.769 0.00 0.00 41.36 4.30
326 345 6.503524 TGCTATTCAAAATAAATTCGAGGGC 58.496 36.000 0.00 0.00 0.00 5.19
327 346 6.321181 TGCTATTCAAAATAAATTCGAGGGCT 59.679 34.615 0.00 0.00 0.00 5.19
328 347 6.858478 GCTATTCAAAATAAATTCGAGGGCTC 59.142 38.462 0.00 0.00 0.00 4.70
329 348 5.576447 TTCAAAATAAATTCGAGGGCTCC 57.424 39.130 0.00 0.00 0.00 4.70
330 349 4.855340 TCAAAATAAATTCGAGGGCTCCT 58.145 39.130 0.00 0.00 36.03 3.69
331 350 4.640201 TCAAAATAAATTCGAGGGCTCCTG 59.360 41.667 0.00 0.00 31.76 3.86
332 351 3.933861 AATAAATTCGAGGGCTCCTGT 57.066 42.857 0.00 0.00 31.76 4.00
333 352 2.691409 TAAATTCGAGGGCTCCTGTG 57.309 50.000 0.00 0.00 31.76 3.66
334 353 0.678048 AAATTCGAGGGCTCCTGTGC 60.678 55.000 0.00 0.00 31.76 4.57
335 354 1.841302 AATTCGAGGGCTCCTGTGCA 61.841 55.000 0.00 0.00 31.76 4.57
336 355 1.841302 ATTCGAGGGCTCCTGTGCAA 61.841 55.000 0.00 0.00 31.76 4.08
337 356 2.032528 CGAGGGCTCCTGTGCAAA 59.967 61.111 0.00 0.00 31.76 3.68
338 357 1.600636 CGAGGGCTCCTGTGCAAAA 60.601 57.895 0.00 0.00 31.76 2.44
339 358 0.962356 CGAGGGCTCCTGTGCAAAAT 60.962 55.000 0.00 0.00 31.76 1.82
340 359 1.678728 CGAGGGCTCCTGTGCAAAATA 60.679 52.381 0.00 0.00 31.76 1.40
341 360 2.446435 GAGGGCTCCTGTGCAAAATAA 58.554 47.619 0.00 0.00 31.76 1.40
342 361 2.825532 GAGGGCTCCTGTGCAAAATAAA 59.174 45.455 0.00 0.00 31.76 1.40
343 362 3.238597 AGGGCTCCTGTGCAAAATAAAA 58.761 40.909 0.00 0.00 29.57 1.52
344 363 3.645687 AGGGCTCCTGTGCAAAATAAAAA 59.354 39.130 0.00 0.00 29.57 1.94
359 378 1.923619 AAAAACACGCGCACATTGC 59.076 47.368 5.73 0.00 40.69 3.56
360 379 1.486644 AAAAACACGCGCACATTGCC 61.487 50.000 5.73 0.00 41.12 4.52
361 380 4.681643 AACACGCGCACATTGCCG 62.682 61.111 5.73 7.27 41.12 5.69
366 385 3.472298 GCGCACATTGCCGCAAAG 61.472 61.111 10.42 8.45 41.12 2.77
367 386 3.472298 CGCACATTGCCGCAAAGC 61.472 61.111 10.42 13.21 41.12 3.51
382 401 4.801147 GCAAAGCGATATCTGTCATTGA 57.199 40.909 0.34 0.00 0.00 2.57
383 402 4.521943 GCAAAGCGATATCTGTCATTGAC 58.478 43.478 9.93 9.93 0.00 3.18
384 403 4.034394 GCAAAGCGATATCTGTCATTGACA 59.966 41.667 18.08 18.08 40.50 3.58
391 410 2.429494 TGTCATTGACAGCGGCCA 59.571 55.556 15.41 0.00 37.67 5.36
392 411 1.965930 TGTCATTGACAGCGGCCAC 60.966 57.895 15.41 0.00 37.67 5.01
393 412 2.741985 TCATTGACAGCGGCCACG 60.742 61.111 2.24 0.00 44.63 4.94
394 413 3.049674 CATTGACAGCGGCCACGT 61.050 61.111 2.24 0.00 43.45 4.49
395 414 3.049674 ATTGACAGCGGCCACGTG 61.050 61.111 9.08 9.08 43.45 4.49
435 454 3.314772 CGGCATATACGCACGCAA 58.685 55.556 0.00 0.00 0.00 4.85
436 455 1.639000 CGGCATATACGCACGCAAA 59.361 52.632 0.00 0.00 0.00 3.68
437 456 0.653323 CGGCATATACGCACGCAAAC 60.653 55.000 0.00 0.00 0.00 2.93
438 457 0.375454 GGCATATACGCACGCAAACA 59.625 50.000 0.00 0.00 0.00 2.83
439 458 1.594518 GGCATATACGCACGCAAACAG 60.595 52.381 0.00 0.00 0.00 3.16
440 459 1.730176 CATATACGCACGCAAACAGC 58.270 50.000 0.00 0.00 40.87 4.40
441 460 0.655733 ATATACGCACGCAAACAGCC 59.344 50.000 0.00 0.00 41.38 4.85
442 461 1.688422 TATACGCACGCAAACAGCCG 61.688 55.000 0.00 0.00 41.38 5.52
445 464 4.389576 GCACGCAAACAGCCGGAG 62.390 66.667 5.05 0.00 41.38 4.63
446 465 2.972505 CACGCAAACAGCCGGAGT 60.973 61.111 5.05 0.00 41.38 3.85
447 466 2.972505 ACGCAAACAGCCGGAGTG 60.973 61.111 5.05 3.64 41.38 3.51
448 467 2.664851 CGCAAACAGCCGGAGTGA 60.665 61.111 5.05 0.00 41.38 3.41
449 468 2.946762 GCAAACAGCCGGAGTGAC 59.053 61.111 5.05 0.00 37.23 3.67
450 469 2.617274 GCAAACAGCCGGAGTGACC 61.617 63.158 5.05 0.00 37.23 4.02
451 470 1.227823 CAAACAGCCGGAGTGACCA 60.228 57.895 5.05 0.00 38.90 4.02
452 471 0.606401 CAAACAGCCGGAGTGACCAT 60.606 55.000 5.05 0.00 38.90 3.55
453 472 0.981183 AAACAGCCGGAGTGACCATA 59.019 50.000 5.05 0.00 38.90 2.74
454 473 1.204146 AACAGCCGGAGTGACCATAT 58.796 50.000 5.05 0.00 38.90 1.78
455 474 1.204146 ACAGCCGGAGTGACCATATT 58.796 50.000 5.05 0.00 38.90 1.28
456 475 1.559682 ACAGCCGGAGTGACCATATTT 59.440 47.619 5.05 0.00 38.90 1.40
457 476 1.942657 CAGCCGGAGTGACCATATTTG 59.057 52.381 5.05 0.00 38.90 2.32
458 477 0.663153 GCCGGAGTGACCATATTTGC 59.337 55.000 5.05 0.00 38.90 3.68
459 478 2.016604 GCCGGAGTGACCATATTTGCA 61.017 52.381 5.05 0.00 38.90 4.08
460 479 1.670811 CCGGAGTGACCATATTTGCAC 59.329 52.381 0.00 0.00 38.90 4.57
461 480 1.670811 CGGAGTGACCATATTTGCACC 59.329 52.381 0.00 0.00 38.90 5.01
462 481 2.680805 CGGAGTGACCATATTTGCACCT 60.681 50.000 0.00 0.00 38.90 4.00
463 482 3.431626 CGGAGTGACCATATTTGCACCTA 60.432 47.826 0.00 0.00 38.90 3.08
464 483 4.523083 GGAGTGACCATATTTGCACCTAA 58.477 43.478 0.00 0.00 38.79 2.69
465 484 4.947388 GGAGTGACCATATTTGCACCTAAA 59.053 41.667 0.00 0.00 38.79 1.85
466 485 5.163652 GGAGTGACCATATTTGCACCTAAAC 60.164 44.000 0.00 0.00 38.79 2.01
467 486 5.321102 AGTGACCATATTTGCACCTAAACA 58.679 37.500 0.00 0.00 31.85 2.83
468 487 5.183140 AGTGACCATATTTGCACCTAAACAC 59.817 40.000 0.00 0.00 31.85 3.32
469 488 5.048364 GTGACCATATTTGCACCTAAACACA 60.048 40.000 0.00 0.00 0.00 3.72
470 489 5.536538 TGACCATATTTGCACCTAAACACAA 59.463 36.000 0.00 0.00 0.00 3.33
471 490 6.024552 ACCATATTTGCACCTAAACACAAG 57.975 37.500 0.00 0.00 0.00 3.16
472 491 5.538433 ACCATATTTGCACCTAAACACAAGT 59.462 36.000 0.00 0.00 0.00 3.16
473 492 6.041523 ACCATATTTGCACCTAAACACAAGTT 59.958 34.615 0.00 0.00 40.40 2.66
474 493 7.231722 ACCATATTTGCACCTAAACACAAGTTA 59.768 33.333 0.00 0.00 36.84 2.24
475 494 7.540745 CCATATTTGCACCTAAACACAAGTTAC 59.459 37.037 0.00 0.00 36.84 2.50
476 495 4.539509 TTGCACCTAAACACAAGTTACG 57.460 40.909 0.00 0.00 36.84 3.18
477 496 3.533547 TGCACCTAAACACAAGTTACGT 58.466 40.909 0.00 0.00 36.84 3.57
478 497 3.310227 TGCACCTAAACACAAGTTACGTG 59.690 43.478 0.00 0.00 36.84 4.49
479 498 3.556775 GCACCTAAACACAAGTTACGTGA 59.443 43.478 5.15 0.00 36.84 4.35
480 499 4.212636 GCACCTAAACACAAGTTACGTGAT 59.787 41.667 5.15 0.00 36.84 3.06
481 500 5.614013 GCACCTAAACACAAGTTACGTGATC 60.614 44.000 5.15 0.00 36.84 2.92
482 501 5.464057 CACCTAAACACAAGTTACGTGATCA 59.536 40.000 5.15 0.00 36.84 2.92
483 502 5.694910 ACCTAAACACAAGTTACGTGATCAG 59.305 40.000 5.15 0.00 36.84 2.90
484 503 5.924254 CCTAAACACAAGTTACGTGATCAGA 59.076 40.000 5.15 0.00 36.84 3.27
485 504 6.422701 CCTAAACACAAGTTACGTGATCAGAA 59.577 38.462 5.15 0.00 36.84 3.02
486 505 6.671614 AAACACAAGTTACGTGATCAGAAA 57.328 33.333 5.15 0.00 36.84 2.52
487 506 5.907197 ACACAAGTTACGTGATCAGAAAG 57.093 39.130 5.15 0.00 37.80 2.62
488 507 4.211374 ACACAAGTTACGTGATCAGAAAGC 59.789 41.667 5.15 0.00 37.80 3.51
489 508 3.746492 ACAAGTTACGTGATCAGAAAGCC 59.254 43.478 5.15 0.00 0.00 4.35
490 509 2.607187 AGTTACGTGATCAGAAAGCCG 58.393 47.619 0.00 0.00 0.00 5.52
491 510 1.060698 GTTACGTGATCAGAAAGCCGC 59.939 52.381 0.00 0.00 0.00 6.53
492 511 0.245266 TACGTGATCAGAAAGCCGCA 59.755 50.000 0.00 0.00 0.00 5.69
493 512 0.391661 ACGTGATCAGAAAGCCGCAT 60.392 50.000 0.00 0.00 0.00 4.73
494 513 0.729116 CGTGATCAGAAAGCCGCATT 59.271 50.000 0.00 0.00 0.00 3.56
495 514 1.131126 CGTGATCAGAAAGCCGCATTT 59.869 47.619 0.00 0.00 0.00 2.32
496 515 2.414559 CGTGATCAGAAAGCCGCATTTT 60.415 45.455 0.00 0.00 0.00 1.82
497 516 3.578688 GTGATCAGAAAGCCGCATTTTT 58.421 40.909 0.00 0.00 0.00 1.94
498 517 4.671508 CGTGATCAGAAAGCCGCATTTTTA 60.672 41.667 0.00 0.00 0.00 1.52
499 518 5.160641 GTGATCAGAAAGCCGCATTTTTAA 58.839 37.500 0.00 0.00 0.00 1.52
500 519 5.633182 GTGATCAGAAAGCCGCATTTTTAAA 59.367 36.000 0.00 0.00 0.00 1.52
501 520 5.863397 TGATCAGAAAGCCGCATTTTTAAAG 59.137 36.000 0.00 0.00 0.00 1.85
502 521 5.195001 TCAGAAAGCCGCATTTTTAAAGT 57.805 34.783 0.00 0.00 0.00 2.66
503 522 5.596845 TCAGAAAGCCGCATTTTTAAAGTT 58.403 33.333 0.00 0.00 0.00 2.66
504 523 6.045955 TCAGAAAGCCGCATTTTTAAAGTTT 58.954 32.000 0.00 0.00 0.00 2.66
505 524 6.019156 TCAGAAAGCCGCATTTTTAAAGTTTG 60.019 34.615 0.00 0.00 0.00 2.93
506 525 6.019156 CAGAAAGCCGCATTTTTAAAGTTTGA 60.019 34.615 0.00 0.00 0.00 2.69
507 526 6.536941 AGAAAGCCGCATTTTTAAAGTTTGAA 59.463 30.769 0.00 0.00 0.00 2.69
508 527 5.651172 AGCCGCATTTTTAAAGTTTGAAC 57.349 34.783 0.00 0.00 0.00 3.18
509 528 5.112686 AGCCGCATTTTTAAAGTTTGAACA 58.887 33.333 0.00 0.00 0.00 3.18
510 529 5.006261 AGCCGCATTTTTAAAGTTTGAACAC 59.994 36.000 0.00 0.00 0.00 3.32
511 530 5.733299 CCGCATTTTTAAAGTTTGAACACC 58.267 37.500 0.00 0.00 0.00 4.16
512 531 5.292101 CCGCATTTTTAAAGTTTGAACACCA 59.708 36.000 0.00 0.00 0.00 4.17
513 532 6.183360 CCGCATTTTTAAAGTTTGAACACCAA 60.183 34.615 0.00 0.00 0.00 3.67
514 533 7.237173 CGCATTTTTAAAGTTTGAACACCAAA 58.763 30.769 0.00 0.00 42.07 3.28
522 541 3.883830 TTTGAACACCAAACTGCACAT 57.116 38.095 0.00 0.00 39.65 3.21
523 542 3.435105 TTGAACACCAAACTGCACATC 57.565 42.857 0.00 0.00 0.00 3.06
524 543 1.680735 TGAACACCAAACTGCACATCC 59.319 47.619 0.00 0.00 0.00 3.51
525 544 1.680735 GAACACCAAACTGCACATCCA 59.319 47.619 0.00 0.00 0.00 3.41
526 545 1.774110 ACACCAAACTGCACATCCAA 58.226 45.000 0.00 0.00 0.00 3.53
527 546 1.408702 ACACCAAACTGCACATCCAAC 59.591 47.619 0.00 0.00 0.00 3.77
528 547 1.408340 CACCAAACTGCACATCCAACA 59.592 47.619 0.00 0.00 0.00 3.33
529 548 1.408702 ACCAAACTGCACATCCAACAC 59.591 47.619 0.00 0.00 0.00 3.32
530 549 1.408340 CCAAACTGCACATCCAACACA 59.592 47.619 0.00 0.00 0.00 3.72
531 550 2.159128 CCAAACTGCACATCCAACACAA 60.159 45.455 0.00 0.00 0.00 3.33
532 551 3.117794 CAAACTGCACATCCAACACAAG 58.882 45.455 0.00 0.00 0.00 3.16
533 552 2.057137 ACTGCACATCCAACACAAGT 57.943 45.000 0.00 0.00 0.00 3.16
534 553 2.378038 ACTGCACATCCAACACAAGTT 58.622 42.857 0.00 0.00 38.88 2.66
548 567 3.639538 CACAAGTTGTGCGACTAGTAGT 58.360 45.455 22.33 1.37 41.89 2.73
549 568 3.425525 CACAAGTTGTGCGACTAGTAGTG 59.574 47.826 22.33 1.62 41.89 2.74
550 569 3.317149 ACAAGTTGTGCGACTAGTAGTGA 59.683 43.478 7.76 0.00 0.00 3.41
551 570 4.022242 ACAAGTTGTGCGACTAGTAGTGAT 60.022 41.667 7.76 0.00 0.00 3.06
552 571 5.182570 ACAAGTTGTGCGACTAGTAGTGATA 59.817 40.000 7.76 0.00 0.00 2.15
553 572 6.127703 ACAAGTTGTGCGACTAGTAGTGATAT 60.128 38.462 7.76 0.00 0.00 1.63
554 573 6.452494 AGTTGTGCGACTAGTAGTGATATT 57.548 37.500 7.76 0.00 0.00 1.28
555 574 7.563888 AGTTGTGCGACTAGTAGTGATATTA 57.436 36.000 7.76 0.00 0.00 0.98
556 575 7.416022 AGTTGTGCGACTAGTAGTGATATTAC 58.584 38.462 7.76 0.00 0.00 1.89
557 576 6.309712 TGTGCGACTAGTAGTGATATTACC 57.690 41.667 7.76 0.00 0.00 2.85
558 577 6.060136 TGTGCGACTAGTAGTGATATTACCT 58.940 40.000 7.76 0.00 0.00 3.08
592 612 2.621668 GGGCCTTCTCTTGGTATTTGCT 60.622 50.000 0.84 0.00 0.00 3.91
598 618 3.334691 TCTCTTGGTATTTGCTGTTCCG 58.665 45.455 0.00 0.00 0.00 4.30
615 635 2.635443 CGCCCAACAAGCCCGAAAT 61.635 57.895 0.00 0.00 0.00 2.17
631 651 4.335416 CCGAAATACCAGCCCATCATTAT 58.665 43.478 0.00 0.00 0.00 1.28
661 681 0.736636 GCGTAAACCAGCCCATTACC 59.263 55.000 0.00 0.00 0.00 2.85
674 694 3.714487 ATTACCATTGGGCCGCGCT 62.714 57.895 5.56 0.00 37.90 5.92
699 719 3.326109 CGGAACCCGTCACAACAC 58.674 61.111 0.00 0.00 42.73 3.32
701 721 1.768112 CGGAACCCGTCACAACACAC 61.768 60.000 0.00 0.00 42.73 3.82
702 722 0.745128 GGAACCCGTCACAACACACA 60.745 55.000 0.00 0.00 0.00 3.72
703 723 1.088306 GAACCCGTCACAACACACAA 58.912 50.000 0.00 0.00 0.00 3.33
715 735 1.668419 ACACACAACAGAGTCCAAGC 58.332 50.000 0.00 0.00 0.00 4.01
884 910 2.225522 CCAGAAAATAAACCCCCACCCT 60.226 50.000 0.00 0.00 0.00 4.34
912 938 2.046411 TCGCCTCCGTACCGTACA 60.046 61.111 9.34 0.00 35.54 2.90
995 1037 4.867599 GCGTCCGTCCGTCCATCC 62.868 72.222 0.00 0.00 0.00 3.51
996 1038 3.445687 CGTCCGTCCGTCCATCCA 61.446 66.667 0.00 0.00 0.00 3.41
997 1039 2.494918 GTCCGTCCGTCCATCCAG 59.505 66.667 0.00 0.00 0.00 3.86
998 1040 3.458163 TCCGTCCGTCCATCCAGC 61.458 66.667 0.00 0.00 0.00 4.85
1133 1175 3.842923 CGATCTGGTGAGCGCCCT 61.843 66.667 2.29 0.00 45.01 5.19
1134 1176 2.586792 GATCTGGTGAGCGCCCTT 59.413 61.111 2.29 0.00 0.00 3.95
1251 1297 3.349006 CTTTGGTGCGCGCAGTCT 61.349 61.111 37.44 0.00 0.00 3.24
1357 1403 2.550606 CTCGAGAGCATGAGGTACTACC 59.449 54.545 6.58 0.00 41.55 3.18
1372 1418 5.767269 GGTACTACCTTCTACTTATTCGCC 58.233 45.833 0.00 0.00 34.73 5.54
1420 1466 0.743345 GTCCCCGAATTCTGTTCCGG 60.743 60.000 3.52 0.00 41.47 5.14
1497 1543 0.810648 GCGAATTTGATGAGTGGGCA 59.189 50.000 0.00 0.00 0.00 5.36
1517 1563 0.463620 GGCTCTAGTTCTGGCCTCTG 59.536 60.000 3.32 0.00 41.20 3.35
1525 1573 2.104170 GTTCTGGCCTCTGTAGCTACT 58.896 52.381 23.84 0.00 0.00 2.57
1549 1597 6.479972 TCTACCTGACGAACCATTATGAAT 57.520 37.500 0.00 0.00 0.00 2.57
1617 1665 6.109359 CCTCGACTGAGATTTTGACCTTTAT 58.891 40.000 0.00 0.00 45.57 1.40
1618 1666 7.265673 CCTCGACTGAGATTTTGACCTTTATA 58.734 38.462 0.00 0.00 45.57 0.98
1623 1671 7.112779 ACTGAGATTTTGACCTTTATACAGGG 58.887 38.462 9.73 0.00 38.42 4.45
1640 1688 3.031736 CAGGGAGGAGATTCGTTCCTTA 58.968 50.000 0.00 0.00 45.00 2.69
1668 1723 5.482908 TGTTTAGATTTCTGCTCTCTGTCC 58.517 41.667 0.00 0.00 0.00 4.02
1693 1748 6.093495 CGAATTCCTTGAATGTGTAGGCTTTA 59.907 38.462 0.00 0.00 32.14 1.85
1696 1751 5.488341 TCCTTGAATGTGTAGGCTTTAGTC 58.512 41.667 0.00 0.00 0.00 2.59
1703 1759 7.934665 TGAATGTGTAGGCTTTAGTCTTGTAAA 59.065 33.333 0.00 0.00 0.00 2.01
1836 1892 1.115467 CTACCAGGCAGGAGATTCGT 58.885 55.000 1.67 0.00 41.22 3.85
1866 1922 1.139734 CTCCATGACGTCTGTCCCG 59.860 63.158 17.92 0.00 44.86 5.14
1972 2030 3.671008 TTACGCTCACACCTGTTGTAT 57.329 42.857 0.00 0.00 35.67 2.29
2012 2070 7.914859 TGATTCTGGACATTGCTGATATATCT 58.085 34.615 13.79 0.00 0.00 1.98
2013 2071 7.822822 TGATTCTGGACATTGCTGATATATCTG 59.177 37.037 13.79 13.74 0.00 2.90
2014 2072 6.676990 TCTGGACATTGCTGATATATCTGT 57.323 37.500 17.80 11.54 0.00 3.41
2015 2073 7.071069 TCTGGACATTGCTGATATATCTGTT 57.929 36.000 17.80 4.48 0.00 3.16
2017 2075 7.015974 TCTGGACATTGCTGATATATCTGTTCT 59.984 37.037 17.80 3.77 0.00 3.01
2041 2099 2.295909 TGTTTTGCAGAAGTACATGGCC 59.704 45.455 0.00 0.00 0.00 5.36
2050 2108 2.890808 AGTACATGGCCGACATACTG 57.109 50.000 0.00 0.00 37.84 2.74
2112 2170 0.625316 TGTGCCTGCCATGTTCCTAT 59.375 50.000 0.00 0.00 0.00 2.57
2155 2213 1.135575 CCTTTCAGCGTGAATTGAGGC 60.136 52.381 1.02 1.02 36.11 4.70
2174 2232 2.620585 GGCTAGCCTGCTTAAGATTTGG 59.379 50.000 27.17 3.10 0.00 3.28
2175 2233 2.033927 GCTAGCCTGCTTAAGATTTGGC 59.966 50.000 6.67 12.61 40.54 4.52
2245 2303 1.071542 TCTGAAGGCGACATTGGTTCA 59.928 47.619 0.00 0.00 0.00 3.18
2345 2403 9.163903 CTGTTTTCGTTTTGTTTTGTGAATTTT 57.836 25.926 0.00 0.00 0.00 1.82
2396 2491 7.410174 AGGTATTTAGTTCATGTCCATCCAAA 58.590 34.615 0.00 0.00 0.00 3.28
2407 2502 5.930837 TGTCCATCCAAAAGTTCTGTTTT 57.069 34.783 0.00 0.00 0.00 2.43
2498 2599 9.628500 AGAGGTTAAAGTTTAGACAGTCATTTT 57.372 29.630 2.66 0.00 0.00 1.82
2671 2774 8.662781 TCTTATGTGATGGCTAATTTGTACTC 57.337 34.615 0.00 0.00 0.00 2.59
2672 2775 7.715249 TCTTATGTGATGGCTAATTTGTACTCC 59.285 37.037 0.00 0.00 0.00 3.85
2673 2776 4.523083 TGTGATGGCTAATTTGTACTCCC 58.477 43.478 0.00 0.00 0.00 4.30
2674 2777 4.227300 TGTGATGGCTAATTTGTACTCCCT 59.773 41.667 0.00 0.00 0.00 4.20
2675 2778 4.816925 GTGATGGCTAATTTGTACTCCCTC 59.183 45.833 0.00 0.00 0.00 4.30
2676 2779 3.926058 TGGCTAATTTGTACTCCCTCC 57.074 47.619 0.00 0.00 0.00 4.30
2677 2780 2.169769 TGGCTAATTTGTACTCCCTCCG 59.830 50.000 0.00 0.00 0.00 4.63
2678 2781 2.169978 GGCTAATTTGTACTCCCTCCGT 59.830 50.000 0.00 0.00 0.00 4.69
2679 2782 3.370209 GGCTAATTTGTACTCCCTCCGTT 60.370 47.826 0.00 0.00 0.00 4.44
2680 2783 3.869832 GCTAATTTGTACTCCCTCCGTTC 59.130 47.826 0.00 0.00 0.00 3.95
2681 2784 3.345508 AATTTGTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
2682 2785 2.019807 TTTGTACTCCCTCCGTTCCT 57.980 50.000 0.00 0.00 0.00 3.36
2683 2786 2.905415 TTGTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
2684 2787 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
2685 2788 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2686 2789 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2687 2790 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2688 2791 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2689 2792 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
2690 2793 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2691 2794 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2692 2795 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2693 2796 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2694 2797 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2695 2798 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2696 2799 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2697 2800 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2698 2801 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2699 2802 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2700 2803 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2701 2804 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2716 2819 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
2725 2828 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
2726 2829 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
2727 2830 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2728 2831 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2729 2832 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2730 2833 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2731 2834 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2732 2835 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2733 2836 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2734 2837 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2735 2838 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2736 2839 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2737 2840 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2738 2841 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2739 2842 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2740 2843 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2741 2844 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2742 2845 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2743 2846 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2744 2847 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2745 2848 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2746 2849 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2747 2850 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2748 2851 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2784 2887 9.682465 TCTATATACATCTGTATGTGGTAGTCC 57.318 37.037 12.10 0.00 45.99 3.85
2785 2888 9.462606 CTATATACATCTGTATGTGGTAGTCCA 57.537 37.037 12.10 0.00 45.99 4.02
2786 2889 8.901472 ATATACATCTGTATGTGGTAGTCCAT 57.099 34.615 12.10 0.00 45.99 3.41
2787 2890 5.957771 ACATCTGTATGTGGTAGTCCATT 57.042 39.130 0.00 0.00 44.79 3.16
2788 2891 6.313519 ACATCTGTATGTGGTAGTCCATTT 57.686 37.500 0.00 0.00 44.79 2.32
2789 2892 6.115446 ACATCTGTATGTGGTAGTCCATTTG 58.885 40.000 0.00 0.00 44.79 2.32
2790 2893 6.070251 ACATCTGTATGTGGTAGTCCATTTGA 60.070 38.462 0.00 0.00 44.79 2.69
2791 2894 6.367374 TCTGTATGTGGTAGTCCATTTGAA 57.633 37.500 0.00 0.00 46.20 2.69
2792 2895 6.774673 TCTGTATGTGGTAGTCCATTTGAAA 58.225 36.000 0.00 0.00 46.20 2.69
2793 2896 7.402054 TCTGTATGTGGTAGTCCATTTGAAAT 58.598 34.615 0.00 0.00 46.20 2.17
2794 2897 7.552687 TCTGTATGTGGTAGTCCATTTGAAATC 59.447 37.037 0.00 0.00 46.20 2.17
2795 2898 7.402054 TGTATGTGGTAGTCCATTTGAAATCT 58.598 34.615 0.00 0.00 46.20 2.40
2796 2899 7.552687 TGTATGTGGTAGTCCATTTGAAATCTC 59.447 37.037 0.00 0.00 46.20 2.75
2797 2900 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
2798 2901 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
2799 2902 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
2800 2903 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
2801 2904 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
2802 2905 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
2806 2909 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2807 2910 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2825 2928 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
2826 2929 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2827 2930 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
2828 2931 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
2829 2932 8.344939 ACAAATATTTAGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
2840 2943 7.069986 GGAATGGAGGGAGTATATAGCTATCA 58.930 42.308 10.16 0.00 0.00 2.15
2849 2952 7.397761 GGGAGTATATAGCTATCAGACCAAGTT 59.602 40.741 10.16 0.00 0.00 2.66
2871 3009 6.259829 AGTTTCCAATACATTGTTGGTTTTGC 59.740 34.615 7.27 0.00 45.05 3.68
2923 3064 7.839680 ATTGTTGGATTCTACTGAAACCTTT 57.160 32.000 6.63 0.00 43.14 3.11
2924 3065 7.654022 TTGTTGGATTCTACTGAAACCTTTT 57.346 32.000 6.63 0.00 43.14 2.27
2925 3066 7.654022 TGTTGGATTCTACTGAAACCTTTTT 57.346 32.000 6.63 0.00 43.14 1.94
2967 3108 4.797471 TGGTGAAATTGCTCAAGAATTCG 58.203 39.130 0.00 0.00 0.00 3.34
3112 3254 6.043358 GGAGGCTTAACTTCCTACCATATCTT 59.957 42.308 0.00 0.00 31.71 2.40
3280 3425 7.013464 TCCTATTCGCTCTAGTTCTCTAAAAGG 59.987 40.741 0.00 0.00 0.00 3.11
3315 3460 4.645136 ACATCGGCAGTCTCTAGTATTCAA 59.355 41.667 0.00 0.00 0.00 2.69
3461 3607 8.934023 AAGGATATTGGTAGTCAAAGTTTTGA 57.066 30.769 3.28 3.28 44.31 2.69
3531 3698 3.430333 ACTTTACTTGTGCCCAAAACG 57.570 42.857 0.00 0.00 0.00 3.60
3532 3699 2.100087 ACTTTACTTGTGCCCAAAACGG 59.900 45.455 0.00 0.00 0.00 4.44
3572 3739 2.900546 AGTGAGTAACTGGGTCTCCTTG 59.099 50.000 0.00 0.00 37.88 3.61
3589 3758 7.227512 GGTCTCCTTGTTGTAATATCCAATCTG 59.772 40.741 0.00 0.00 0.00 2.90
3858 4027 7.171653 TGAAAATTGTGGACATACATACTCCA 58.828 34.615 0.00 0.00 0.00 3.86
3866 4035 5.899547 TGGACATACATACTCCATCTGTTCT 59.100 40.000 0.00 0.00 0.00 3.01
3914 4083 2.099098 CGCCTTGTTGGTTTTCTTGTCT 59.901 45.455 0.00 0.00 38.35 3.41
4026 4195 2.880890 CCTGTAGCTATTCACCAATGGC 59.119 50.000 0.00 0.00 44.79 4.40
4046 4217 5.872963 TGGCTATACTGATGCATGATTTCT 58.127 37.500 2.46 0.00 0.00 2.52
4179 4350 8.213518 ACATTAGGTCATACACTGCTATTTTG 57.786 34.615 0.00 0.00 0.00 2.44
4210 4381 5.645067 TGCACATCTCTCTAAATGGTTTCTG 59.355 40.000 0.00 0.00 0.00 3.02
4225 4396 7.832503 ATGGTTTCTGTAAATTATTGCTTGC 57.167 32.000 0.00 0.00 0.00 4.01
4623 4794 4.926238 CGCCATGTATGTATTTCTCTCCTC 59.074 45.833 0.00 0.00 0.00 3.71
4624 4795 4.926238 GCCATGTATGTATTTCTCTCCTCG 59.074 45.833 0.00 0.00 0.00 4.63
4634 4805 1.032657 TCTCTCCTCGCTTTCCCTCG 61.033 60.000 0.00 0.00 0.00 4.63
4657 4828 1.098589 TCCCTCTTTCCACCTCCCTA 58.901 55.000 0.00 0.00 0.00 3.53
4672 4843 5.893255 CACCTCCCTATGAATTTTGATTCCA 59.107 40.000 0.00 0.00 0.00 3.53
4684 4855 8.112822 TGAATTTTGATTCCATCTGTACCCTTA 58.887 33.333 0.00 0.00 0.00 2.69
4693 4864 4.261801 CATCTGTACCCTTAACCTTGGTG 58.738 47.826 0.00 0.00 33.55 4.17
4760 4931 1.181786 CCGTGAGCTCTCCTCTTCTT 58.818 55.000 16.19 0.00 41.35 2.52
5129 5300 4.499188 GCCAGGTTAGTTTTTGTGGAGAAC 60.499 45.833 0.00 0.00 0.00 3.01
5130 5301 4.642885 CCAGGTTAGTTTTTGTGGAGAACA 59.357 41.667 0.00 0.00 36.85 3.18
5163 5334 3.494048 GGTCCATATGAGGCAAGAGTGAG 60.494 52.174 3.65 0.00 0.00 3.51
5164 5335 2.103771 TCCATATGAGGCAAGAGTGAGC 59.896 50.000 3.65 0.00 0.00 4.26
5165 5336 2.158856 CCATATGAGGCAAGAGTGAGCA 60.159 50.000 3.65 0.00 0.00 4.26
5166 5337 3.496337 CCATATGAGGCAAGAGTGAGCAT 60.496 47.826 3.65 0.00 0.00 3.79
5167 5338 2.803030 ATGAGGCAAGAGTGAGCATT 57.197 45.000 0.00 0.00 0.00 3.56
5168 5339 3.920231 ATGAGGCAAGAGTGAGCATTA 57.080 42.857 0.00 0.00 0.00 1.90
5313 5484 4.603131 AGCCTGGTACAATCACATCATTT 58.397 39.130 0.00 0.00 38.70 2.32
5565 5736 1.002792 CTGCTTCCTCTCCCCCTCT 59.997 63.158 0.00 0.00 0.00 3.69
5566 5737 0.620121 CTGCTTCCTCTCCCCCTCTT 60.620 60.000 0.00 0.00 0.00 2.85
5567 5738 0.178861 TGCTTCCTCTCCCCCTCTTT 60.179 55.000 0.00 0.00 0.00 2.52
5568 5739 0.254462 GCTTCCTCTCCCCCTCTTTG 59.746 60.000 0.00 0.00 0.00 2.77
5569 5740 1.958288 CTTCCTCTCCCCCTCTTTGA 58.042 55.000 0.00 0.00 0.00 2.69
5570 5741 2.486716 CTTCCTCTCCCCCTCTTTGAT 58.513 52.381 0.00 0.00 0.00 2.57
5571 5742 3.658725 CTTCCTCTCCCCCTCTTTGATA 58.341 50.000 0.00 0.00 0.00 2.15
5572 5743 4.238669 CTTCCTCTCCCCCTCTTTGATAT 58.761 47.826 0.00 0.00 0.00 1.63
5573 5744 4.302004 TCCTCTCCCCCTCTTTGATATT 57.698 45.455 0.00 0.00 0.00 1.28
5574 5745 5.434003 TCCTCTCCCCCTCTTTGATATTA 57.566 43.478 0.00 0.00 0.00 0.98
5575 5746 5.994629 TCCTCTCCCCCTCTTTGATATTAT 58.005 41.667 0.00 0.00 0.00 1.28
5576 5747 5.787494 TCCTCTCCCCCTCTTTGATATTATG 59.213 44.000 0.00 0.00 0.00 1.90
5577 5748 5.495640 CTCTCCCCCTCTTTGATATTATGC 58.504 45.833 0.00 0.00 0.00 3.14
5578 5749 4.289672 TCTCCCCCTCTTTGATATTATGCC 59.710 45.833 0.00 0.00 0.00 4.40
5579 5750 4.251169 TCCCCCTCTTTGATATTATGCCT 58.749 43.478 0.00 0.00 0.00 4.75
5580 5751 4.289672 TCCCCCTCTTTGATATTATGCCTC 59.710 45.833 0.00 0.00 0.00 4.70
5703 5874 3.763897 GTGCAATCTTGGGTCTTGGTATT 59.236 43.478 0.00 0.00 0.00 1.89
6105 6370 1.593196 TCGCCCAGTCTTTTGTGAAG 58.407 50.000 0.00 0.00 0.00 3.02
6106 6371 1.140052 TCGCCCAGTCTTTTGTGAAGA 59.860 47.619 0.00 0.00 0.00 2.87
6150 6415 7.452880 AGAAAGCTGATTGCAATTGTTACTA 57.547 32.000 14.33 0.00 45.94 1.82
6176 6441 9.840427 ATTGTTTTCATACTATGTTGTTGCTAC 57.160 29.630 0.00 0.00 0.00 3.58
6215 6480 6.427242 AGCTTATGCACACATCTTCATCATAG 59.573 38.462 3.16 0.00 42.74 2.23
6219 6484 3.624410 GCACACATCTTCATCATAGCACA 59.376 43.478 0.00 0.00 0.00 4.57
6220 6485 4.275196 GCACACATCTTCATCATAGCACAT 59.725 41.667 0.00 0.00 0.00 3.21
6758 7023 6.003326 TCTTGAATTTGTGCCTGATCAGTTA 58.997 36.000 21.11 6.99 0.00 2.24
6792 7057 4.694982 TCGCAGAGTTCATTAGAATGCAAA 59.305 37.500 0.00 0.00 37.20 3.68
6793 7058 5.181056 TCGCAGAGTTCATTAGAATGCAAAA 59.819 36.000 0.00 0.00 37.20 2.44
6843 7113 7.945033 TCAAAGCAAAACATTTTGATCCTAC 57.055 32.000 18.91 2.51 44.98 3.18
6844 7114 6.640499 TCAAAGCAAAACATTTTGATCCTACG 59.360 34.615 18.91 3.23 44.98 3.51
6848 7118 5.638596 AAAACATTTTGATCCTACGTCCC 57.361 39.130 0.00 0.00 0.00 4.46
6857 7127 3.659195 TGATCCTACGTCCCCCTAAGATA 59.341 47.826 0.00 0.00 0.00 1.98
6876 7146 1.831580 AAGAGATTGCTGGTCCTTGC 58.168 50.000 0.00 0.00 0.00 4.01
6878 7148 1.353694 AGAGATTGCTGGTCCTTGCTT 59.646 47.619 8.49 0.00 0.00 3.91
6879 7149 1.742268 GAGATTGCTGGTCCTTGCTTC 59.258 52.381 8.49 6.13 0.00 3.86
6882 7152 2.949177 TTGCTGGTCCTTGCTTCTTA 57.051 45.000 8.49 0.00 0.00 2.10
6944 7214 6.693315 AGTGTAACAAAAGTGCAACATACT 57.307 33.333 0.00 0.00 38.71 2.12
6945 7215 7.795482 AGTGTAACAAAAGTGCAACATACTA 57.205 32.000 0.00 0.00 38.71 1.82
6946 7216 8.391075 AGTGTAACAAAAGTGCAACATACTAT 57.609 30.769 0.00 0.00 38.71 2.12
6948 7218 8.286800 GTGTAACAAAAGTGCAACATACTATCA 58.713 33.333 0.00 0.00 36.19 2.15
6949 7219 8.841300 TGTAACAAAAGTGCAACATACTATCAA 58.159 29.630 0.00 0.00 41.43 2.57
6950 7220 9.672086 GTAACAAAAGTGCAACATACTATCAAA 57.328 29.630 0.00 0.00 41.43 2.69
6951 7221 8.801715 AACAAAAGTGCAACATACTATCAAAG 57.198 30.769 0.00 0.00 41.43 2.77
6952 7222 7.370383 ACAAAAGTGCAACATACTATCAAAGG 58.630 34.615 0.00 0.00 41.43 3.11
6953 7223 7.230510 ACAAAAGTGCAACATACTATCAAAGGA 59.769 33.333 0.00 0.00 41.43 3.36
6954 7224 6.743575 AAGTGCAACATACTATCAAAGGAC 57.256 37.500 0.00 0.00 41.43 3.85
6955 7225 6.054860 AGTGCAACATACTATCAAAGGACT 57.945 37.500 0.00 0.00 41.43 3.85
6956 7226 6.476378 AGTGCAACATACTATCAAAGGACTT 58.524 36.000 0.00 0.00 41.43 3.01
7009 7279 5.133322 ACTGGGACATTCTCCATGTTATGAT 59.867 40.000 0.00 0.00 46.96 2.45
7140 7412 2.878406 TCATGATGCAGATGCTGATGTG 59.122 45.455 6.35 0.00 42.66 3.21
7295 7568 6.835819 ATAGCTGGTATGCTTCGTAATCTA 57.164 37.500 0.00 0.00 43.74 1.98
7430 7703 5.647589 ACTTGCATATGCTGATCAGTTTTG 58.352 37.500 27.13 16.20 42.66 2.44
7475 7748 1.408969 GGCTTGTTCACCTTGGGAAA 58.591 50.000 0.00 0.00 0.00 3.13
7587 7860 7.283807 TCCAATATTGTTGGATTCATCTGACAG 59.716 37.037 14.25 0.00 43.17 3.51
7600 7873 5.684704 TCATCTGACAGTTCCTTTGTTCTT 58.315 37.500 1.59 0.00 0.00 2.52
7601 7874 6.122277 TCATCTGACAGTTCCTTTGTTCTTT 58.878 36.000 1.59 0.00 0.00 2.52
7602 7875 6.603201 TCATCTGACAGTTCCTTTGTTCTTTT 59.397 34.615 1.59 0.00 0.00 2.27
7603 7876 7.773224 TCATCTGACAGTTCCTTTGTTCTTTTA 59.227 33.333 1.59 0.00 0.00 1.52
7618 7891 7.391148 TGTTCTTTTATTTAGGATGGCACTC 57.609 36.000 0.00 0.00 0.00 3.51
7994 8269 3.188159 TGGCGACTGACAAGTAAGTTT 57.812 42.857 0.00 0.00 36.52 2.66
8009 8284 3.838244 AAGTTTGACTAGGACTGCACA 57.162 42.857 0.00 0.00 0.00 4.57
8017 8292 3.929610 GACTAGGACTGCACATGTTCTTC 59.070 47.826 0.00 0.00 0.00 2.87
8018 8293 1.800805 AGGACTGCACATGTTCTTCG 58.199 50.000 0.00 0.00 0.00 3.79
8027 8302 3.049912 CACATGTTCTTCGTCGTCTGAA 58.950 45.455 0.00 0.00 0.00 3.02
8091 8366 4.375406 AGGTACATCCCCCTGACG 57.625 61.111 0.00 0.00 36.75 4.35
8213 8491 2.125350 GCTTGGCAGACTCGGAGG 60.125 66.667 10.23 0.00 0.00 4.30
8214 8492 2.125350 CTTGGCAGACTCGGAGGC 60.125 66.667 10.23 6.31 0.00 4.70
8230 8508 1.157870 AGGCAAAGGTTGTCGTCACG 61.158 55.000 0.00 0.00 41.01 4.35
8252 8530 4.379302 GAGGATCCTTTGATATGCCCTT 57.621 45.455 17.42 0.00 0.00 3.95
8340 8618 0.465287 CAAGCTTGTTTGGTTGCCCT 59.535 50.000 18.65 0.00 38.35 5.19
8632 8965 2.432972 GCCTGGCCAAACGCAATG 60.433 61.111 7.01 0.00 40.31 2.82
8633 8966 2.432972 CCTGGCCAAACGCAATGC 60.433 61.111 7.01 0.00 40.31 3.56
8634 8967 2.339348 CTGGCCAAACGCAATGCA 59.661 55.556 7.01 0.00 40.31 3.96
8635 8968 2.023223 CTGGCCAAACGCAATGCAC 61.023 57.895 7.01 0.00 40.31 4.57
8636 8969 2.339712 GGCCAAACGCAATGCACT 59.660 55.556 5.91 0.00 40.31 4.40
8637 8970 1.300853 GGCCAAACGCAATGCACTT 60.301 52.632 5.91 0.00 40.31 3.16
8638 8971 0.038709 GGCCAAACGCAATGCACTTA 60.039 50.000 5.91 0.00 40.31 2.24
8640 8973 2.159310 GGCCAAACGCAATGCACTTATA 60.159 45.455 5.91 0.00 40.31 0.98
8641 8974 3.506810 GCCAAACGCAATGCACTTATAA 58.493 40.909 5.91 0.00 37.47 0.98
8648 8981 4.215399 ACGCAATGCACTTATAACACTGTT 59.785 37.500 5.91 0.00 0.00 3.16
8687 9020 2.093500 TGGTGCACTACATCATCAGGAC 60.093 50.000 17.98 0.00 33.24 3.85
8701 9034 1.894093 TCAGGACTGAGCTGAGCATCA 60.894 52.381 7.39 6.81 37.47 3.07
8733 9066 2.742372 CGGCCCTGTTCGGTTGAG 60.742 66.667 0.00 0.00 0.00 3.02
8734 9067 3.056328 GGCCCTGTTCGGTTGAGC 61.056 66.667 0.00 0.00 0.00 4.26
8771 9121 3.692406 GGGACTCGCCTGTTCGGT 61.692 66.667 0.00 0.00 36.66 4.69
8776 9126 0.175073 ACTCGCCTGTTCGGTAATCC 59.825 55.000 0.00 0.00 34.25 3.01
8777 9127 0.460311 CTCGCCTGTTCGGTAATCCT 59.540 55.000 0.00 0.00 34.25 3.24
8778 9128 0.458669 TCGCCTGTTCGGTAATCCTC 59.541 55.000 0.00 0.00 34.25 3.71
8781 9131 0.104304 CCTGTTCGGTAATCCTCCGG 59.896 60.000 0.00 0.00 46.82 5.14
8782 9132 0.529992 CTGTTCGGTAATCCTCCGGC 60.530 60.000 0.00 0.00 46.82 6.13
8783 9133 0.974010 TGTTCGGTAATCCTCCGGCT 60.974 55.000 0.00 0.00 46.82 5.52
8784 9134 0.249363 GTTCGGTAATCCTCCGGCTC 60.249 60.000 0.00 0.00 46.82 4.70
8785 9135 1.397390 TTCGGTAATCCTCCGGCTCC 61.397 60.000 0.00 0.00 46.82 4.70
8786 9136 2.131709 CGGTAATCCTCCGGCTCCA 61.132 63.158 0.00 0.00 43.68 3.86
8787 9137 1.446366 GGTAATCCTCCGGCTCCAC 59.554 63.158 0.00 0.00 0.00 4.02
8788 9138 1.335132 GGTAATCCTCCGGCTCCACA 61.335 60.000 0.00 0.00 0.00 4.17
8789 9139 0.539986 GTAATCCTCCGGCTCCACAA 59.460 55.000 0.00 0.00 0.00 3.33
8790 9140 1.065709 GTAATCCTCCGGCTCCACAAA 60.066 52.381 0.00 0.00 0.00 2.83
8791 9141 0.404040 AATCCTCCGGCTCCACAAAA 59.596 50.000 0.00 0.00 0.00 2.44
8792 9142 0.625849 ATCCTCCGGCTCCACAAAAT 59.374 50.000 0.00 0.00 0.00 1.82
8793 9143 0.035439 TCCTCCGGCTCCACAAAATC 60.035 55.000 0.00 0.00 0.00 2.17
8794 9144 1.032114 CCTCCGGCTCCACAAAATCC 61.032 60.000 0.00 0.00 0.00 3.01
8795 9145 1.001393 TCCGGCTCCACAAAATCCC 60.001 57.895 0.00 0.00 0.00 3.85
8796 9146 2.406616 CCGGCTCCACAAAATCCCG 61.407 63.158 0.00 0.00 35.74 5.14
8797 9147 2.885113 GGCTCCACAAAATCCCGC 59.115 61.111 0.00 0.00 0.00 6.13
8798 9148 2.485122 GCTCCACAAAATCCCGCG 59.515 61.111 0.00 0.00 0.00 6.46
8799 9149 2.485122 CTCCACAAAATCCCGCGC 59.515 61.111 0.00 0.00 0.00 6.86
8800 9150 2.033448 TCCACAAAATCCCGCGCT 59.967 55.556 5.56 0.00 0.00 5.92
8801 9151 1.982073 CTCCACAAAATCCCGCGCTC 61.982 60.000 5.56 0.00 0.00 5.03
8802 9152 2.040544 CCACAAAATCCCGCGCTCT 61.041 57.895 5.56 0.00 0.00 4.09
8803 9153 1.135315 CACAAAATCCCGCGCTCTG 59.865 57.895 5.56 0.00 0.00 3.35
8804 9154 2.040544 ACAAAATCCCGCGCTCTGG 61.041 57.895 5.56 3.12 0.00 3.86
8805 9155 3.134127 AAAATCCCGCGCTCTGGC 61.134 61.111 5.56 0.00 0.00 4.85
8806 9156 3.628646 AAAATCCCGCGCTCTGGCT 62.629 57.895 5.56 0.00 36.09 4.75
8807 9157 4.537433 AATCCCGCGCTCTGGCTC 62.537 66.667 5.56 0.00 36.09 4.70
8839 9189 1.069823 CTCCCACTCCTCAATCCATCG 59.930 57.143 0.00 0.00 0.00 3.84
8841 9191 1.473965 CCCACTCCTCAATCCATCGTG 60.474 57.143 0.00 0.00 0.00 4.35
8879 9229 2.391389 CGGAGCGCCACTTTTCCTC 61.391 63.158 7.44 0.00 0.00 3.71
8880 9230 2.391389 GGAGCGCCACTTTTCCTCG 61.391 63.158 2.29 0.00 0.00 4.63
8882 9232 3.050275 GCGCCACTTTTCCTCGCT 61.050 61.111 0.00 0.00 42.19 4.93
8883 9233 3.028366 GCGCCACTTTTCCTCGCTC 62.028 63.158 0.00 0.00 42.19 5.03
8885 9235 1.003233 GCCACTTTTCCTCGCTCCT 60.003 57.895 0.00 0.00 0.00 3.69
8886 9236 0.606673 GCCACTTTTCCTCGCTCCTT 60.607 55.000 0.00 0.00 0.00 3.36
8887 9237 1.160137 CCACTTTTCCTCGCTCCTTG 58.840 55.000 0.00 0.00 0.00 3.61
8888 9238 1.270839 CCACTTTTCCTCGCTCCTTGA 60.271 52.381 0.00 0.00 0.00 3.02
8890 9240 1.270893 ACTTTTCCTCGCTCCTTGACC 60.271 52.381 0.00 0.00 0.00 4.02
8892 9242 1.933021 TTTCCTCGCTCCTTGACCTA 58.067 50.000 0.00 0.00 0.00 3.08
8893 9243 2.160721 TTCCTCGCTCCTTGACCTAT 57.839 50.000 0.00 0.00 0.00 2.57
8894 9244 1.403814 TCCTCGCTCCTTGACCTATG 58.596 55.000 0.00 0.00 0.00 2.23
8895 9245 1.063942 TCCTCGCTCCTTGACCTATGA 60.064 52.381 0.00 0.00 0.00 2.15
8896 9246 1.067821 CCTCGCTCCTTGACCTATGAC 59.932 57.143 0.00 0.00 0.00 3.06
8902 9252 3.005367 GCTCCTTGACCTATGACTAGCTC 59.995 52.174 0.00 0.00 0.00 4.09
8909 9259 0.109964 CTATGACTAGCTCGCTCCGC 60.110 60.000 0.00 0.00 0.00 5.54
8920 9270 4.853050 GCTCCGCTCCATGCTGCT 62.853 66.667 0.00 0.00 40.11 4.24
8943 9293 2.821546 CTCCGCGGAGATTTCATTGTA 58.178 47.619 45.28 11.95 44.53 2.41
8944 9294 3.393800 CTCCGCGGAGATTTCATTGTAT 58.606 45.455 45.28 0.00 44.53 2.29
8945 9295 4.556233 CTCCGCGGAGATTTCATTGTATA 58.444 43.478 45.28 10.73 44.53 1.47
8946 9296 5.147330 TCCGCGGAGATTTCATTGTATAT 57.853 39.130 27.28 0.00 0.00 0.86
8947 9297 6.275494 TCCGCGGAGATTTCATTGTATATA 57.725 37.500 27.28 0.00 0.00 0.86
8949 9299 8.002984 TCCGCGGAGATTTCATTGTATATATA 57.997 34.615 27.28 0.00 0.00 0.86
8951 9301 9.261180 CCGCGGAGATTTCATTGTATATATATT 57.739 33.333 24.07 0.00 0.00 1.28
9036 9454 4.103943 GGATAGGAGAAGCTTCCCAGATTT 59.896 45.833 26.22 13.76 38.02 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 5.467035 TTGCCCAGTTTTTCCTAGATTTG 57.533 39.130 0.00 0.00 0.00 2.32
7 8 5.511373 GCTTTTGCCCAGTTTTTCCTAGATT 60.511 40.000 0.00 0.00 40.15 2.40
76 86 0.811281 CTTGGCGTTTCCTTGGGATC 59.189 55.000 0.00 0.00 35.26 3.36
81 94 0.314935 ATGTGCTTGGCGTTTCCTTG 59.685 50.000 0.00 0.00 35.26 3.61
100 113 4.451150 CTCAGCCGCCGCCACTTA 62.451 66.667 0.00 0.00 34.57 2.24
108 124 3.642778 TTACACGCTCTCAGCCGCC 62.643 63.158 0.00 0.00 38.18 6.13
119 135 0.882927 TGCAAGGGTCACTTACACGC 60.883 55.000 0.00 0.00 37.29 5.34
124 140 3.339547 GCCTTGCAAGGGTCACTTA 57.660 52.632 39.51 0.00 46.56 2.24
125 141 4.181051 GCCTTGCAAGGGTCACTT 57.819 55.556 39.51 0.00 46.56 3.16
173 192 3.961225 TAACGGAGCGGTGCCCCTA 62.961 63.158 0.00 0.00 0.00 3.53
192 211 2.878580 CTAGCATCCATCGAGAGCATC 58.121 52.381 0.00 0.00 0.00 3.91
194 213 0.316522 GCTAGCATCCATCGAGAGCA 59.683 55.000 10.63 0.00 0.00 4.26
195 214 0.389687 GGCTAGCATCCATCGAGAGC 60.390 60.000 18.24 0.00 0.00 4.09
197 216 0.964700 CAGGCTAGCATCCATCGAGA 59.035 55.000 18.24 0.00 0.00 4.04
198 217 0.037512 CCAGGCTAGCATCCATCGAG 60.038 60.000 18.24 0.00 0.00 4.04
199 218 2.052779 CCAGGCTAGCATCCATCGA 58.947 57.895 18.24 0.00 0.00 3.59
200 219 1.670406 GCCAGGCTAGCATCCATCG 60.670 63.158 18.24 0.00 0.00 3.84
201 220 0.979665 TAGCCAGGCTAGCATCCATC 59.020 55.000 18.06 0.00 40.44 3.51
202 221 1.666365 ATAGCCAGGCTAGCATCCAT 58.334 50.000 25.62 6.05 44.66 3.41
203 222 2.325661 TATAGCCAGGCTAGCATCCA 57.674 50.000 25.62 3.60 44.66 3.41
204 223 2.679349 GCTTATAGCCAGGCTAGCATCC 60.679 54.545 25.62 9.70 44.66 3.51
216 235 5.107298 CGAATGCTACTTCTTGCTTATAGCC 60.107 44.000 0.00 0.00 41.51 3.93
254 273 2.100989 AGTAACTAACCAGGCGAGAGG 58.899 52.381 0.00 0.00 0.00 3.69
255 274 4.579340 TCATAGTAACTAACCAGGCGAGAG 59.421 45.833 0.00 0.00 0.00 3.20
257 276 4.913335 TCATAGTAACTAACCAGGCGAG 57.087 45.455 0.00 0.00 0.00 5.03
259 278 5.657474 TCTTTCATAGTAACTAACCAGGCG 58.343 41.667 0.00 0.00 0.00 5.52
260 279 7.065923 CCTTTCTTTCATAGTAACTAACCAGGC 59.934 40.741 0.00 0.00 0.00 4.85
261 280 7.065923 GCCTTTCTTTCATAGTAACTAACCAGG 59.934 40.741 0.00 0.00 0.00 4.45
262 281 7.065923 GGCCTTTCTTTCATAGTAACTAACCAG 59.934 40.741 0.00 0.00 0.00 4.00
263 282 6.882678 GGCCTTTCTTTCATAGTAACTAACCA 59.117 38.462 0.00 0.00 0.00 3.67
264 283 7.110810 AGGCCTTTCTTTCATAGTAACTAACC 58.889 38.462 0.00 0.00 0.00 2.85
265 284 8.563123 AAGGCCTTTCTTTCATAGTAACTAAC 57.437 34.615 13.78 0.00 0.00 2.34
266 285 8.603304 AGAAGGCCTTTCTTTCATAGTAACTAA 58.397 33.333 21.54 0.00 43.68 2.24
267 286 8.147244 AGAAGGCCTTTCTTTCATAGTAACTA 57.853 34.615 21.54 0.00 43.68 2.24
268 287 7.021998 AGAAGGCCTTTCTTTCATAGTAACT 57.978 36.000 21.54 3.43 43.68 2.24
269 288 7.106890 AGAGAAGGCCTTTCTTTCATAGTAAC 58.893 38.462 21.54 0.77 46.12 2.50
270 289 7.259088 AGAGAAGGCCTTTCTTTCATAGTAA 57.741 36.000 21.54 0.00 46.12 2.24
271 290 6.875972 AGAGAAGGCCTTTCTTTCATAGTA 57.124 37.500 21.54 0.00 46.12 1.82
272 291 5.770685 AGAGAAGGCCTTTCTTTCATAGT 57.229 39.130 21.54 0.00 46.12 2.12
273 292 5.356470 CCAAGAGAAGGCCTTTCTTTCATAG 59.644 44.000 26.83 19.33 46.12 2.23
274 293 5.222130 ACCAAGAGAAGGCCTTTCTTTCATA 60.222 40.000 26.83 0.00 46.12 2.15
275 294 4.085009 CCAAGAGAAGGCCTTTCTTTCAT 58.915 43.478 26.83 13.09 46.12 2.57
276 295 3.117512 ACCAAGAGAAGGCCTTTCTTTCA 60.118 43.478 26.83 0.00 46.12 2.69
277 296 3.491342 ACCAAGAGAAGGCCTTTCTTTC 58.509 45.455 26.83 19.35 46.12 2.62
278 297 3.602205 ACCAAGAGAAGGCCTTTCTTT 57.398 42.857 26.83 17.06 46.12 2.52
279 298 4.936685 ATACCAAGAGAAGGCCTTTCTT 57.063 40.909 25.08 25.08 46.12 2.52
281 300 4.380973 GCAAATACCAAGAGAAGGCCTTTC 60.381 45.833 21.54 17.94 35.97 2.62
282 301 3.511540 GCAAATACCAAGAGAAGGCCTTT 59.488 43.478 21.54 9.74 0.00 3.11
283 302 3.092301 GCAAATACCAAGAGAAGGCCTT 58.908 45.455 20.65 20.65 0.00 4.35
284 303 2.310052 AGCAAATACCAAGAGAAGGCCT 59.690 45.455 0.00 0.00 0.00 5.19
285 304 2.728007 AGCAAATACCAAGAGAAGGCC 58.272 47.619 0.00 0.00 0.00 5.19
286 305 5.590259 TGAATAGCAAATACCAAGAGAAGGC 59.410 40.000 0.00 0.00 0.00 4.35
287 306 7.630242 TTGAATAGCAAATACCAAGAGAAGG 57.370 36.000 0.00 0.00 32.46 3.46
299 318 9.533253 CCCTCGAATTTATTTTGAATAGCAAAT 57.467 29.630 0.00 0.00 45.30 2.32
300 319 7.491048 GCCCTCGAATTTATTTTGAATAGCAAA 59.509 33.333 0.00 0.00 44.38 3.68
301 320 6.978080 GCCCTCGAATTTATTTTGAATAGCAA 59.022 34.615 0.00 0.00 33.88 3.91
302 321 6.321181 AGCCCTCGAATTTATTTTGAATAGCA 59.679 34.615 0.00 0.00 0.00 3.49
303 322 6.739112 AGCCCTCGAATTTATTTTGAATAGC 58.261 36.000 0.00 0.00 0.00 2.97
304 323 7.229506 AGGAGCCCTCGAATTTATTTTGAATAG 59.770 37.037 0.00 0.00 0.00 1.73
305 324 7.013274 CAGGAGCCCTCGAATTTATTTTGAATA 59.987 37.037 0.00 0.00 0.00 1.75
306 325 5.893824 AGGAGCCCTCGAATTTATTTTGAAT 59.106 36.000 0.00 0.00 0.00 2.57
307 326 5.125417 CAGGAGCCCTCGAATTTATTTTGAA 59.875 40.000 0.00 0.00 0.00 2.69
308 327 4.640201 CAGGAGCCCTCGAATTTATTTTGA 59.360 41.667 0.00 0.00 0.00 2.69
309 328 4.399303 ACAGGAGCCCTCGAATTTATTTTG 59.601 41.667 0.00 0.00 0.00 2.44
310 329 4.399303 CACAGGAGCCCTCGAATTTATTTT 59.601 41.667 0.00 0.00 0.00 1.82
311 330 3.947834 CACAGGAGCCCTCGAATTTATTT 59.052 43.478 0.00 0.00 0.00 1.40
312 331 3.545703 CACAGGAGCCCTCGAATTTATT 58.454 45.455 0.00 0.00 0.00 1.40
313 332 2.746472 GCACAGGAGCCCTCGAATTTAT 60.746 50.000 0.00 0.00 0.00 1.40
314 333 1.406887 GCACAGGAGCCCTCGAATTTA 60.407 52.381 0.00 0.00 0.00 1.40
315 334 0.678048 GCACAGGAGCCCTCGAATTT 60.678 55.000 0.00 0.00 0.00 1.82
316 335 1.078143 GCACAGGAGCCCTCGAATT 60.078 57.895 0.00 0.00 0.00 2.17
317 336 1.841302 TTGCACAGGAGCCCTCGAAT 61.841 55.000 0.00 0.00 0.00 3.34
318 337 2.050836 TTTGCACAGGAGCCCTCGAA 62.051 55.000 0.00 0.00 0.00 3.71
319 338 2.050836 TTTTGCACAGGAGCCCTCGA 62.051 55.000 0.00 0.00 0.00 4.04
320 339 0.962356 ATTTTGCACAGGAGCCCTCG 60.962 55.000 0.00 0.00 0.00 4.63
321 340 2.128771 TATTTTGCACAGGAGCCCTC 57.871 50.000 0.00 0.00 0.00 4.30
322 341 2.603075 TTATTTTGCACAGGAGCCCT 57.397 45.000 0.00 0.00 0.00 5.19
323 342 3.676291 TTTTATTTTGCACAGGAGCCC 57.324 42.857 0.00 0.00 0.00 5.19
341 360 1.486644 GGCAATGTGCGCGTGTTTTT 61.487 50.000 8.43 0.00 46.21 1.94
342 361 1.948635 GGCAATGTGCGCGTGTTTT 60.949 52.632 8.43 0.00 46.21 2.43
343 362 2.354539 GGCAATGTGCGCGTGTTT 60.355 55.556 8.43 0.00 46.21 2.83
344 363 4.681643 CGGCAATGTGCGCGTGTT 62.682 61.111 8.43 0.00 46.21 3.32
349 368 3.472298 CTTTGCGGCAATGTGCGC 61.472 61.111 17.19 0.00 46.21 6.09
350 369 3.472298 GCTTTGCGGCAATGTGCG 61.472 61.111 23.97 10.06 46.21 5.34
359 378 7.735429 GTCAATGACAGATATCGCTTTGCGG 62.735 48.000 8.74 0.00 41.44 5.69
360 379 4.838321 GTCAATGACAGATATCGCTTTGCG 60.838 45.833 8.74 5.53 41.99 4.85
361 380 4.034394 TGTCAATGACAGATATCGCTTTGC 59.966 41.667 12.63 4.25 37.67 3.68
362 381 5.723492 TGTCAATGACAGATATCGCTTTG 57.277 39.130 12.63 6.38 37.67 2.77
374 393 1.965930 GTGGCCGCTGTCAATGACA 60.966 57.895 15.88 15.88 40.50 3.58
375 394 2.870372 GTGGCCGCTGTCAATGAC 59.130 61.111 9.68 6.41 0.00 3.06
376 395 2.741985 CGTGGCCGCTGTCAATGA 60.742 61.111 15.69 0.00 0.00 2.57
377 396 3.049674 ACGTGGCCGCTGTCAATG 61.050 61.111 15.69 0.00 37.70 2.82
378 397 3.049674 CACGTGGCCGCTGTCAAT 61.050 61.111 15.69 0.00 37.70 2.57
418 437 0.653323 GTTTGCGTGCGTATATGCCG 60.653 55.000 14.32 16.50 0.00 5.69
419 438 0.375454 TGTTTGCGTGCGTATATGCC 59.625 50.000 14.32 5.09 0.00 4.40
420 439 1.730176 CTGTTTGCGTGCGTATATGC 58.270 50.000 10.13 10.13 0.00 3.14
421 440 1.594518 GGCTGTTTGCGTGCGTATATG 60.595 52.381 0.00 0.00 44.05 1.78
422 441 0.655733 GGCTGTTTGCGTGCGTATAT 59.344 50.000 0.00 0.00 44.05 0.86
423 442 1.688422 CGGCTGTTTGCGTGCGTATA 61.688 55.000 0.00 0.00 44.05 1.47
424 443 2.867472 GGCTGTTTGCGTGCGTAT 59.133 55.556 0.00 0.00 44.05 3.06
425 444 3.707700 CGGCTGTTTGCGTGCGTA 61.708 61.111 0.00 0.00 44.05 4.42
428 447 4.389576 CTCCGGCTGTTTGCGTGC 62.390 66.667 0.00 0.00 44.05 5.34
429 448 2.972505 ACTCCGGCTGTTTGCGTG 60.973 61.111 0.00 0.00 44.05 5.34
430 449 2.972505 CACTCCGGCTGTTTGCGT 60.973 61.111 0.00 0.00 44.05 5.24
431 450 2.664851 TCACTCCGGCTGTTTGCG 60.665 61.111 0.00 0.00 44.05 4.85
432 451 2.617274 GGTCACTCCGGCTGTTTGC 61.617 63.158 0.00 0.00 41.94 3.68
433 452 0.606401 ATGGTCACTCCGGCTGTTTG 60.606 55.000 0.00 0.00 39.52 2.93
434 453 0.981183 TATGGTCACTCCGGCTGTTT 59.019 50.000 0.00 0.00 39.52 2.83
435 454 1.204146 ATATGGTCACTCCGGCTGTT 58.796 50.000 0.00 0.00 39.52 3.16
436 455 1.204146 AATATGGTCACTCCGGCTGT 58.796 50.000 0.00 0.00 39.52 4.40
437 456 1.942657 CAAATATGGTCACTCCGGCTG 59.057 52.381 0.00 0.00 39.52 4.85
438 457 1.747206 GCAAATATGGTCACTCCGGCT 60.747 52.381 0.00 0.00 39.52 5.52
439 458 0.663153 GCAAATATGGTCACTCCGGC 59.337 55.000 0.00 0.00 39.52 6.13
440 459 1.670811 GTGCAAATATGGTCACTCCGG 59.329 52.381 0.00 0.00 39.52 5.14
441 460 1.670811 GGTGCAAATATGGTCACTCCG 59.329 52.381 0.00 0.00 39.52 4.63
442 461 3.004752 AGGTGCAAATATGGTCACTCC 57.995 47.619 0.00 0.00 0.00 3.85
443 462 5.414454 TGTTTAGGTGCAAATATGGTCACTC 59.586 40.000 0.00 0.00 0.00 3.51
444 463 5.183140 GTGTTTAGGTGCAAATATGGTCACT 59.817 40.000 0.00 0.00 0.00 3.41
445 464 5.048364 TGTGTTTAGGTGCAAATATGGTCAC 60.048 40.000 0.00 0.00 0.00 3.67
446 465 5.073428 TGTGTTTAGGTGCAAATATGGTCA 58.927 37.500 0.00 0.00 0.00 4.02
447 466 5.637006 TGTGTTTAGGTGCAAATATGGTC 57.363 39.130 0.00 0.00 0.00 4.02
448 467 5.538433 ACTTGTGTTTAGGTGCAAATATGGT 59.462 36.000 0.00 0.00 0.00 3.55
449 468 6.024552 ACTTGTGTTTAGGTGCAAATATGG 57.975 37.500 0.00 0.00 0.00 2.74
450 469 7.270365 CGTAACTTGTGTTTAGGTGCAAATATG 59.730 37.037 0.00 0.00 37.59 1.78
451 470 7.040961 ACGTAACTTGTGTTTAGGTGCAAATAT 60.041 33.333 0.00 0.00 37.59 1.28
452 471 6.260493 ACGTAACTTGTGTTTAGGTGCAAATA 59.740 34.615 0.00 0.00 37.59 1.40
453 472 5.066764 ACGTAACTTGTGTTTAGGTGCAAAT 59.933 36.000 0.00 0.00 37.59 2.32
454 473 4.395542 ACGTAACTTGTGTTTAGGTGCAAA 59.604 37.500 0.00 0.00 37.59 3.68
455 474 3.940221 ACGTAACTTGTGTTTAGGTGCAA 59.060 39.130 0.00 0.00 37.59 4.08
456 475 3.310227 CACGTAACTTGTGTTTAGGTGCA 59.690 43.478 0.00 0.00 37.59 4.57
457 476 3.556775 TCACGTAACTTGTGTTTAGGTGC 59.443 43.478 9.13 0.00 38.48 5.01
458 477 5.464057 TGATCACGTAACTTGTGTTTAGGTG 59.536 40.000 0.00 8.09 38.48 4.00
459 478 5.603596 TGATCACGTAACTTGTGTTTAGGT 58.396 37.500 0.00 0.00 38.48 3.08
460 479 5.924254 TCTGATCACGTAACTTGTGTTTAGG 59.076 40.000 0.00 0.00 38.48 2.69
461 480 7.402811 TTCTGATCACGTAACTTGTGTTTAG 57.597 36.000 0.00 0.00 38.48 1.85
462 481 7.517734 GCTTTCTGATCACGTAACTTGTGTTTA 60.518 37.037 0.00 0.00 38.48 2.01
463 482 6.671614 TTTCTGATCACGTAACTTGTGTTT 57.328 33.333 0.00 0.00 38.48 2.83
464 483 5.277345 GCTTTCTGATCACGTAACTTGTGTT 60.277 40.000 0.00 0.00 38.48 3.32
465 484 4.211374 GCTTTCTGATCACGTAACTTGTGT 59.789 41.667 0.00 0.00 38.48 3.72
466 485 4.377431 GGCTTTCTGATCACGTAACTTGTG 60.377 45.833 0.00 0.00 38.70 3.33
467 486 3.746492 GGCTTTCTGATCACGTAACTTGT 59.254 43.478 0.00 0.00 0.00 3.16
468 487 3.181530 CGGCTTTCTGATCACGTAACTTG 60.182 47.826 0.00 0.00 0.00 3.16
469 488 2.993899 CGGCTTTCTGATCACGTAACTT 59.006 45.455 0.00 0.00 0.00 2.66
470 489 2.607187 CGGCTTTCTGATCACGTAACT 58.393 47.619 0.00 0.00 0.00 2.24
471 490 1.060698 GCGGCTTTCTGATCACGTAAC 59.939 52.381 0.00 0.00 0.00 2.50
472 491 1.337354 TGCGGCTTTCTGATCACGTAA 60.337 47.619 0.00 0.00 0.00 3.18
473 492 0.245266 TGCGGCTTTCTGATCACGTA 59.755 50.000 0.00 0.00 0.00 3.57
474 493 0.391661 ATGCGGCTTTCTGATCACGT 60.392 50.000 0.00 0.00 0.00 4.49
475 494 0.729116 AATGCGGCTTTCTGATCACG 59.271 50.000 0.00 0.00 0.00 4.35
476 495 2.927553 AAATGCGGCTTTCTGATCAC 57.072 45.000 0.00 0.00 0.00 3.06
477 496 3.940209 AAAAATGCGGCTTTCTGATCA 57.060 38.095 0.00 0.00 0.00 2.92
478 497 5.863935 ACTTTAAAAATGCGGCTTTCTGATC 59.136 36.000 0.00 0.00 0.00 2.92
479 498 5.783111 ACTTTAAAAATGCGGCTTTCTGAT 58.217 33.333 0.00 0.00 0.00 2.90
480 499 5.195001 ACTTTAAAAATGCGGCTTTCTGA 57.805 34.783 0.00 0.00 0.00 3.27
481 500 5.905480 AACTTTAAAAATGCGGCTTTCTG 57.095 34.783 0.00 0.00 0.00 3.02
482 501 6.045955 TCAAACTTTAAAAATGCGGCTTTCT 58.954 32.000 0.00 0.00 0.00 2.52
483 502 6.280537 TCAAACTTTAAAAATGCGGCTTTC 57.719 33.333 0.00 0.00 0.00 2.62
484 503 6.092807 TGTTCAAACTTTAAAAATGCGGCTTT 59.907 30.769 0.00 0.00 0.00 3.51
485 504 5.582665 TGTTCAAACTTTAAAAATGCGGCTT 59.417 32.000 0.00 0.00 0.00 4.35
486 505 5.006261 GTGTTCAAACTTTAAAAATGCGGCT 59.994 36.000 0.00 0.00 0.00 5.52
487 506 5.194657 GTGTTCAAACTTTAAAAATGCGGC 58.805 37.500 0.00 0.00 0.00 6.53
488 507 5.292101 TGGTGTTCAAACTTTAAAAATGCGG 59.708 36.000 0.00 0.00 0.00 5.69
489 508 6.337853 TGGTGTTCAAACTTTAAAAATGCG 57.662 33.333 0.00 0.00 0.00 4.73
502 521 3.430098 GGATGTGCAGTTTGGTGTTCAAA 60.430 43.478 0.00 0.00 42.50 2.69
503 522 2.100584 GGATGTGCAGTTTGGTGTTCAA 59.899 45.455 0.00 0.00 0.00 2.69
504 523 1.680735 GGATGTGCAGTTTGGTGTTCA 59.319 47.619 0.00 0.00 0.00 3.18
505 524 1.680735 TGGATGTGCAGTTTGGTGTTC 59.319 47.619 0.00 0.00 0.00 3.18
506 525 1.774110 TGGATGTGCAGTTTGGTGTT 58.226 45.000 0.00 0.00 0.00 3.32
507 526 1.408702 GTTGGATGTGCAGTTTGGTGT 59.591 47.619 0.00 0.00 0.00 4.16
508 527 1.408340 TGTTGGATGTGCAGTTTGGTG 59.592 47.619 0.00 0.00 0.00 4.17
509 528 1.408702 GTGTTGGATGTGCAGTTTGGT 59.591 47.619 0.00 0.00 0.00 3.67
510 529 1.408340 TGTGTTGGATGTGCAGTTTGG 59.592 47.619 0.00 0.00 0.00 3.28
511 530 2.867287 TGTGTTGGATGTGCAGTTTG 57.133 45.000 0.00 0.00 0.00 2.93
512 531 2.760092 ACTTGTGTTGGATGTGCAGTTT 59.240 40.909 0.00 0.00 0.00 2.66
513 532 2.378038 ACTTGTGTTGGATGTGCAGTT 58.622 42.857 0.00 0.00 0.00 3.16
514 533 2.057137 ACTTGTGTTGGATGTGCAGT 57.943 45.000 0.00 0.00 0.00 4.40
528 547 3.317149 TCACTACTAGTCGCACAACTTGT 59.683 43.478 0.00 0.00 38.48 3.16
529 548 3.897325 TCACTACTAGTCGCACAACTTG 58.103 45.455 0.00 0.00 0.00 3.16
530 549 4.785511 ATCACTACTAGTCGCACAACTT 57.214 40.909 0.00 0.00 0.00 2.66
531 550 6.452494 AATATCACTACTAGTCGCACAACT 57.548 37.500 0.00 0.00 0.00 3.16
532 551 6.636044 GGTAATATCACTACTAGTCGCACAAC 59.364 42.308 0.00 0.00 0.00 3.32
533 552 6.544931 AGGTAATATCACTACTAGTCGCACAA 59.455 38.462 0.00 0.00 0.00 3.33
534 553 6.060136 AGGTAATATCACTACTAGTCGCACA 58.940 40.000 0.00 0.00 0.00 4.57
535 554 6.557291 AGGTAATATCACTACTAGTCGCAC 57.443 41.667 0.00 0.00 0.00 5.34
536 555 7.578310 AAAGGTAATATCACTACTAGTCGCA 57.422 36.000 0.00 0.00 0.00 5.10
580 600 1.135402 GGCGGAACAGCAAATACCAAG 60.135 52.381 0.00 0.00 39.27 3.61
592 612 2.909965 GGCTTGTTGGGCGGAACA 60.910 61.111 0.00 0.00 33.96 3.18
598 618 0.172578 GTATTTCGGGCTTGTTGGGC 59.827 55.000 0.00 0.00 0.00 5.36
615 635 8.544622 TCGAAATATAATAATGATGGGCTGGTA 58.455 33.333 0.00 0.00 0.00 3.25
631 651 4.508861 GGCTGGTTTACGCTCGAAATATAA 59.491 41.667 0.00 0.00 0.00 0.98
639 659 1.024579 AATGGGCTGGTTTACGCTCG 61.025 55.000 0.00 0.00 0.00 5.03
683 703 0.745128 TGTGTGTTGTGACGGGTTCC 60.745 55.000 0.00 0.00 0.00 3.62
692 712 2.355197 TGGACTCTGTTGTGTGTTGTG 58.645 47.619 0.00 0.00 0.00 3.33
699 719 1.159713 TGCGCTTGGACTCTGTTGTG 61.160 55.000 9.73 0.00 0.00 3.33
701 721 1.572085 CCTGCGCTTGGACTCTGTTG 61.572 60.000 9.73 0.00 0.00 3.33
702 722 1.302033 CCTGCGCTTGGACTCTGTT 60.302 57.895 9.73 0.00 0.00 3.16
703 723 2.210013 TCCTGCGCTTGGACTCTGT 61.210 57.895 16.58 0.00 0.00 3.41
810 830 0.179179 GATCTCCGCTTTGCTTGCAC 60.179 55.000 0.00 0.00 0.00 4.57
954 996 1.588139 GATTCGATTCGCCGACGGT 60.588 57.895 16.73 0.00 38.39 4.83
988 1030 2.182842 GCGACATGGCTGGATGGAC 61.183 63.158 0.00 0.00 0.00 4.02
989 1031 2.190313 GCGACATGGCTGGATGGA 59.810 61.111 0.00 0.00 0.00 3.41
1185 1230 1.467556 GCAGATCGAAGCGAGACGTG 61.468 60.000 0.00 0.00 39.91 4.49
1186 1231 1.226435 GCAGATCGAAGCGAGACGT 60.226 57.895 0.00 0.00 39.91 4.34
1251 1297 4.704103 AGCGCCAGGTCCTCCTCA 62.704 66.667 2.29 0.00 43.07 3.86
1357 1403 3.126831 CCAGCAGGCGAATAAGTAGAAG 58.873 50.000 0.00 0.00 0.00 2.85
1358 1404 2.158957 CCCAGCAGGCGAATAAGTAGAA 60.159 50.000 0.00 0.00 0.00 2.10
1361 1407 1.138266 GTCCCAGCAGGCGAATAAGTA 59.862 52.381 0.00 0.00 34.51 2.24
1362 1408 0.107654 GTCCCAGCAGGCGAATAAGT 60.108 55.000 0.00 0.00 34.51 2.24
1363 1409 0.815615 GGTCCCAGCAGGCGAATAAG 60.816 60.000 0.00 0.00 34.51 1.73
1364 1410 1.223487 GGTCCCAGCAGGCGAATAA 59.777 57.895 0.00 0.00 34.51 1.40
1372 1418 0.617413 AATCTGTGAGGTCCCAGCAG 59.383 55.000 0.00 0.00 0.00 4.24
1420 1466 2.990479 CACCACCAGACCTAGGCC 59.010 66.667 9.30 0.00 0.00 5.19
1517 1563 4.201901 GGTTCGTCAGGTAGAAGTAGCTAC 60.202 50.000 16.43 16.43 39.97 3.58
1525 1573 5.925506 TCATAATGGTTCGTCAGGTAGAA 57.074 39.130 0.00 0.00 0.00 2.10
1549 1597 4.137116 ACACAAACTAGAGTGACAGCAA 57.863 40.909 17.21 0.00 39.03 3.91
1581 1629 1.227853 GTCGAGGGCACACAAAGGT 60.228 57.895 0.00 0.00 0.00 3.50
1617 1665 2.024273 AGGAACGAATCTCCTCCCTGTA 60.024 50.000 0.00 0.00 39.16 2.74
1618 1666 1.196012 GGAACGAATCTCCTCCCTGT 58.804 55.000 0.00 0.00 0.00 4.00
1623 1671 2.696187 AGCCTAAGGAACGAATCTCCTC 59.304 50.000 0.00 0.00 42.77 3.71
1640 1688 4.916183 AGAGCAGAAATCTAAACAAGCCT 58.084 39.130 0.00 0.00 0.00 4.58
1668 1723 3.941483 AGCCTACACATTCAAGGAATTCG 59.059 43.478 0.00 0.00 28.87 3.34
1851 1907 1.078759 GCTTCGGGACAGACGTCATG 61.079 60.000 19.50 14.94 44.54 3.07
1866 1922 1.740025 CGGAGGAATTTCAGTGGCTTC 59.260 52.381 0.00 0.00 0.00 3.86
1905 1961 7.783119 TCTGGCATAGTTTCATAGTAGGACTTA 59.217 37.037 0.00 0.00 0.00 2.24
1956 2012 2.185004 ACCATACAACAGGTGTGAGC 57.815 50.000 0.00 0.00 40.75 4.26
1972 2030 9.473007 TGTCCAGAATCAATATTTAAATCACCA 57.527 29.630 3.39 0.00 0.00 4.17
1986 2044 8.380867 AGATATATCAGCAATGTCCAGAATCAA 58.619 33.333 15.08 0.00 0.00 2.57
2010 2068 5.428253 ACTTCTGCAAAACAGTAGAACAGA 58.572 37.500 6.36 0.00 44.33 3.41
2012 2070 6.110033 TGTACTTCTGCAAAACAGTAGAACA 58.890 36.000 6.36 0.00 44.33 3.18
2013 2071 6.598753 TGTACTTCTGCAAAACAGTAGAAC 57.401 37.500 6.36 0.00 44.33 3.01
2014 2072 6.204688 CCATGTACTTCTGCAAAACAGTAGAA 59.795 38.462 6.36 0.00 44.33 2.10
2015 2073 5.700832 CCATGTACTTCTGCAAAACAGTAGA 59.299 40.000 6.36 0.00 44.33 2.59
2050 2108 1.098712 TTGTCAAGGCCAACACCGAC 61.099 55.000 5.01 2.30 33.69 4.79
2112 2170 6.719370 AGGTATTAAACTGAATTGTGGCAGAA 59.281 34.615 0.00 0.00 36.07 3.02
2155 2213 2.620585 GGCCAAATCTTAAGCAGGCTAG 59.379 50.000 19.51 0.00 41.71 3.42
2174 2232 4.881920 TGAAACAATAAAAAGGCAGAGGC 58.118 39.130 0.00 0.00 40.13 4.70
2175 2233 5.243730 TCCTGAAACAATAAAAAGGCAGAGG 59.756 40.000 0.00 0.00 0.00 3.69
2245 2303 3.723681 ACCTCACATATTCATGACCCCAT 59.276 43.478 0.00 0.00 35.96 4.00
2294 2352 8.989131 AGGTAAAGTAATAATAGAGGAAGCACA 58.011 33.333 0.00 0.00 0.00 4.57
2296 2354 8.989131 ACAGGTAAAGTAATAATAGAGGAAGCA 58.011 33.333 0.00 0.00 0.00 3.91
2297 2355 9.833917 AACAGGTAAAGTAATAATAGAGGAAGC 57.166 33.333 0.00 0.00 0.00 3.86
2309 2367 9.642327 AAACAAAACGAAAACAGGTAAAGTAAT 57.358 25.926 0.00 0.00 0.00 1.89
2310 2368 9.473640 AAAACAAAACGAAAACAGGTAAAGTAA 57.526 25.926 0.00 0.00 0.00 2.24
2368 2426 8.210946 TGGATGGACATGAACTAAATACCTAAG 58.789 37.037 0.00 0.00 0.00 2.18
2498 2599 9.090103 CCTAGGAATAGACCATGTTGAGTATTA 57.910 37.037 1.05 0.00 0.00 0.98
2669 2772 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2670 2773 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2671 2774 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2672 2775 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2673 2776 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2674 2777 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2675 2778 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2690 2793 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
2699 2802 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
2700 2803 8.540492 CCGTATGTAGTCACTTGTTGAAATATC 58.460 37.037 0.00 0.00 35.39 1.63
2701 2804 8.255206 TCCGTATGTAGTCACTTGTTGAAATAT 58.745 33.333 0.00 0.00 35.39 1.28
2702 2805 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
2703 2806 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2704 2807 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2705 2808 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2706 2809 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2707 2810 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2708 2811 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2709 2812 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2710 2813 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2711 2814 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2712 2815 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2713 2816 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2714 2817 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2715 2818 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2716 2819 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2717 2820 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2718 2821 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2719 2822 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2720 2823 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2721 2824 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2722 2825 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2723 2826 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2724 2827 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2725 2828 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2726 2829 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2727 2830 8.621532 TTTAGTGTAGATTCACTCATTTTGCT 57.378 30.769 2.59 0.00 45.79 3.91
2728 2831 9.846248 ATTTTAGTGTAGATTCACTCATTTTGC 57.154 29.630 2.59 0.00 45.79 3.68
2758 2861 9.682465 GGACTACCACATACAGATGTATATAGA 57.318 37.037 5.21 0.00 44.82 1.98
2759 2862 9.462606 TGGACTACCACATACAGATGTATATAG 57.537 37.037 5.21 7.73 44.82 1.31
2780 2883 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2781 2884 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2799 2902 8.981659 CCCTCCATTCCTAAATATTTGTCTTTT 58.018 33.333 11.05 0.00 0.00 2.27
2800 2903 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
2801 2904 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2802 2905 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2803 2906 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2804 2907 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2809 2912 9.435570 GCTATATACTCCCTCCATTCCTAAATA 57.564 37.037 0.00 0.00 0.00 1.40
2810 2913 8.132285 AGCTATATACTCCCTCCATTCCTAAAT 58.868 37.037 0.00 0.00 0.00 1.40
2811 2914 7.488205 AGCTATATACTCCCTCCATTCCTAAA 58.512 38.462 0.00 0.00 0.00 1.85
2812 2915 7.057732 AGCTATATACTCCCTCCATTCCTAA 57.942 40.000 0.00 0.00 0.00 2.69
2813 2916 6.676164 AGCTATATACTCCCTCCATTCCTA 57.324 41.667 0.00 0.00 0.00 2.94
2814 2917 5.560467 AGCTATATACTCCCTCCATTCCT 57.440 43.478 0.00 0.00 0.00 3.36
2815 2918 7.069986 TGATAGCTATATACTCCCTCCATTCC 58.930 42.308 6.13 0.00 0.00 3.01
2816 2919 8.001875 TCTGATAGCTATATACTCCCTCCATTC 58.998 40.741 6.13 0.00 0.00 2.67
2817 2920 7.782644 GTCTGATAGCTATATACTCCCTCCATT 59.217 40.741 6.13 0.00 0.00 3.16
2818 2921 7.294584 GTCTGATAGCTATATACTCCCTCCAT 58.705 42.308 6.13 0.00 0.00 3.41
2819 2922 6.354038 GGTCTGATAGCTATATACTCCCTCCA 60.354 46.154 6.13 0.00 0.00 3.86
2820 2923 6.066032 GGTCTGATAGCTATATACTCCCTCC 58.934 48.000 6.13 0.00 0.00 4.30
2821 2924 6.664714 TGGTCTGATAGCTATATACTCCCTC 58.335 44.000 6.13 0.00 0.00 4.30
2822 2925 6.660147 TGGTCTGATAGCTATATACTCCCT 57.340 41.667 6.13 0.00 0.00 4.20
2823 2926 6.893005 ACTTGGTCTGATAGCTATATACTCCC 59.107 42.308 6.13 3.28 0.00 4.30
2824 2927 7.948034 ACTTGGTCTGATAGCTATATACTCC 57.052 40.000 6.13 6.82 0.00 3.85
2825 2928 9.849166 GAAACTTGGTCTGATAGCTATATACTC 57.151 37.037 6.13 0.00 0.00 2.59
2826 2929 8.808092 GGAAACTTGGTCTGATAGCTATATACT 58.192 37.037 6.13 0.00 0.00 2.12
2827 2930 8.585881 TGGAAACTTGGTCTGATAGCTATATAC 58.414 37.037 6.13 5.23 0.00 1.47
2828 2931 8.721133 TGGAAACTTGGTCTGATAGCTATATA 57.279 34.615 6.13 0.00 0.00 0.86
2829 2932 7.618019 TGGAAACTTGGTCTGATAGCTATAT 57.382 36.000 6.13 0.00 0.00 0.86
2840 2943 6.748132 CAACAATGTATTGGAAACTTGGTCT 58.252 36.000 9.22 0.00 41.96 3.85
2894 3032 6.573664 TTCAGTAGAATCCAACAATTGTGG 57.426 37.500 12.82 15.13 0.00 4.17
2923 3064 2.612972 GCCAGATTCCTGTCACGAGAAA 60.613 50.000 0.00 0.00 38.74 2.52
2924 3065 1.066858 GCCAGATTCCTGTCACGAGAA 60.067 52.381 0.00 0.00 38.74 2.87
2925 3066 0.532573 GCCAGATTCCTGTCACGAGA 59.467 55.000 0.00 0.00 38.74 4.04
2967 3108 0.318699 GTTCCAACCTGGCGCTTTTC 60.319 55.000 7.64 0.00 37.47 2.29
3280 3425 0.387239 GCCGATGTCCAAAACAGCAC 60.387 55.000 0.00 0.00 44.69 4.40
3315 3460 4.009675 TCACAACTCAAAGTGCTCAAAGT 58.990 39.130 0.00 0.00 35.76 2.66
3455 3601 9.997482 TCAAACTTTGACTACTAACATCAAAAC 57.003 29.630 0.00 0.00 40.74 2.43
3531 3698 2.229784 CTCCTGTTGTTGGAAAGATGCC 59.770 50.000 0.00 0.00 32.61 4.40
3532 3699 2.887152 ACTCCTGTTGTTGGAAAGATGC 59.113 45.455 0.00 0.00 32.61 3.91
3540 3707 3.809832 CAGTTACTCACTCCTGTTGTTGG 59.190 47.826 0.00 0.00 30.92 3.77
3589 3758 7.698130 GCAGTGAGTAATAAACAAATGTGATCC 59.302 37.037 0.00 0.00 0.00 3.36
3866 4035 9.716531 TCAATGCATCACCACAAAATTATTTTA 57.283 25.926 0.00 0.00 0.00 1.52
4026 4195 7.645402 TGCAAAGAAATCATGCATCAGTATAG 58.355 34.615 0.00 0.00 44.52 1.31
4179 4350 2.957491 AGAGAGATGTGCACAGTAGC 57.043 50.000 25.84 13.83 0.00 3.58
4623 4794 2.399356 GGGAAAGCGAGGGAAAGCG 61.399 63.158 0.00 0.00 38.61 4.68
4624 4795 1.002011 AGGGAAAGCGAGGGAAAGC 60.002 57.895 0.00 0.00 0.00 3.51
4634 4805 1.614583 GGAGGTGGAAAGAGGGAAAGC 60.615 57.143 0.00 0.00 0.00 3.51
4672 4843 4.172807 TCACCAAGGTTAAGGGTACAGAT 58.827 43.478 0.00 0.00 32.55 2.90
4684 4855 6.976934 AGACATAAACAATTCACCAAGGTT 57.023 33.333 0.00 0.00 0.00 3.50
4735 4906 1.205893 GAGGAGAGCTCACGGTCAAAT 59.794 52.381 17.77 0.00 40.07 2.32
4760 4931 1.377690 TCTCCATGGCCAAACCCTTA 58.622 50.000 10.96 0.00 37.83 2.69
5129 5300 6.515531 GCCTCATATGGACCACAAATAACATG 60.516 42.308 0.00 0.00 0.00 3.21
5130 5301 5.536161 GCCTCATATGGACCACAAATAACAT 59.464 40.000 0.00 0.00 0.00 2.71
5163 5334 9.316859 GCACAAATGAACAAACTTAATTAATGC 57.683 29.630 0.00 0.00 0.00 3.56
5166 5337 9.039870 CCTGCACAAATGAACAAACTTAATTAA 57.960 29.630 0.00 0.00 0.00 1.40
5167 5338 8.417106 TCCTGCACAAATGAACAAACTTAATTA 58.583 29.630 0.00 0.00 0.00 1.40
5168 5339 7.271511 TCCTGCACAAATGAACAAACTTAATT 58.728 30.769 0.00 0.00 0.00 1.40
5571 5742 9.305555 ACTTGCATAATATCAAAGAGGCATAAT 57.694 29.630 0.00 0.00 0.00 1.28
5572 5743 8.696043 ACTTGCATAATATCAAAGAGGCATAA 57.304 30.769 0.00 0.00 0.00 1.90
5573 5744 8.696043 AACTTGCATAATATCAAAGAGGCATA 57.304 30.769 0.00 0.00 0.00 3.14
5574 5745 7.504911 AGAACTTGCATAATATCAAAGAGGCAT 59.495 33.333 0.00 0.00 0.00 4.40
5575 5746 6.830324 AGAACTTGCATAATATCAAAGAGGCA 59.170 34.615 0.00 0.00 0.00 4.75
5576 5747 7.137426 CAGAACTTGCATAATATCAAAGAGGC 58.863 38.462 0.00 0.00 0.00 4.70
5577 5748 8.218338 ACAGAACTTGCATAATATCAAAGAGG 57.782 34.615 0.00 0.00 0.00 3.69
5578 5749 9.107177 AGACAGAACTTGCATAATATCAAAGAG 57.893 33.333 0.00 0.00 0.00 2.85
5579 5750 9.453572 AAGACAGAACTTGCATAATATCAAAGA 57.546 29.630 0.00 0.00 0.00 2.52
5703 5874 3.444742 CCTTTTGAGAACCAGCATATGCA 59.555 43.478 28.62 3.13 45.16 3.96
5828 5999 1.550976 GGGTCTCCCAATATAGCCGAG 59.449 57.143 0.00 0.00 44.65 4.63
6069 6334 4.709397 TGGGCGAATCCTTGAAACAAATAT 59.291 37.500 0.00 0.00 34.39 1.28
6105 6370 3.557228 AGTTGGATCCAAGAGATGCTC 57.443 47.619 27.73 12.91 43.44 4.26
6106 6371 4.293494 TCTAGTTGGATCCAAGAGATGCT 58.707 43.478 27.73 20.43 43.44 3.79
6150 6415 9.840427 GTAGCAACAACATAGTATGAAAACAAT 57.160 29.630 17.13 1.13 0.00 2.71
6176 6441 9.443283 GTGTGCATAAGCTAAATTTAGAATCAG 57.557 33.333 26.00 13.88 42.74 2.90
6404 6669 7.917505 GCAAACATGTTAATCTAGGGATTGAAG 59.082 37.037 12.39 0.00 41.66 3.02
6455 6720 5.280470 GGGAAAAGGTTGGAGCCATTAAAAT 60.280 40.000 0.00 0.00 0.00 1.82
6458 6723 3.169908 GGGAAAAGGTTGGAGCCATTAA 58.830 45.455 0.00 0.00 0.00 1.40
6735 7000 4.778534 ACTGATCAGGCACAAATTCAAG 57.221 40.909 26.08 0.00 0.00 3.02
6758 7023 1.323412 ACTCTGCGACTCTTCACAGT 58.677 50.000 0.00 0.00 34.12 3.55
6820 7090 6.420604 ACGTAGGATCAAAATGTTTTGCTTTG 59.579 34.615 12.21 4.61 45.35 2.77
6843 7113 4.561734 GCAATCTCTTATCTTAGGGGGACG 60.562 50.000 0.00 0.00 0.00 4.79
6844 7114 4.595350 AGCAATCTCTTATCTTAGGGGGAC 59.405 45.833 0.00 0.00 0.00 4.46
6848 7118 5.512232 GGACCAGCAATCTCTTATCTTAGGG 60.512 48.000 0.00 0.00 0.00 3.53
6857 7127 1.353694 AGCAAGGACCAGCAATCTCTT 59.646 47.619 11.02 0.00 0.00 2.85
6933 7203 6.455646 CGAAGTCCTTTGATAGTATGTTGCAC 60.456 42.308 0.00 0.00 0.00 4.57
6939 7209 4.693283 TGGCGAAGTCCTTTGATAGTATG 58.307 43.478 0.00 0.00 0.00 2.39
6940 7210 4.406003 ACTGGCGAAGTCCTTTGATAGTAT 59.594 41.667 0.00 0.00 31.64 2.12
6941 7211 3.767673 ACTGGCGAAGTCCTTTGATAGTA 59.232 43.478 0.00 0.00 31.64 1.82
6943 7213 3.252974 ACTGGCGAAGTCCTTTGATAG 57.747 47.619 0.00 0.00 31.64 2.08
6944 7214 3.244422 ACAACTGGCGAAGTCCTTTGATA 60.244 43.478 0.00 0.00 38.56 2.15
6945 7215 2.154462 CAACTGGCGAAGTCCTTTGAT 58.846 47.619 0.00 0.00 38.56 2.57
6946 7216 1.134220 ACAACTGGCGAAGTCCTTTGA 60.134 47.619 0.00 0.00 38.56 2.69
6948 7218 2.052782 AACAACTGGCGAAGTCCTTT 57.947 45.000 0.00 0.00 38.56 3.11
6949 7219 2.922740 TAACAACTGGCGAAGTCCTT 57.077 45.000 0.00 0.00 38.56 3.36
6950 7220 2.922740 TTAACAACTGGCGAAGTCCT 57.077 45.000 0.00 0.00 38.56 3.85
6951 7221 4.499037 AAATTAACAACTGGCGAAGTCC 57.501 40.909 0.00 0.00 38.56 3.85
6952 7222 4.148174 GCAAAATTAACAACTGGCGAAGTC 59.852 41.667 0.00 0.00 38.56 3.01
6953 7223 4.048504 GCAAAATTAACAACTGGCGAAGT 58.951 39.130 0.00 0.00 42.60 3.01
6954 7224 3.428534 GGCAAAATTAACAACTGGCGAAG 59.571 43.478 0.00 0.00 0.00 3.79
6955 7225 3.181475 TGGCAAAATTAACAACTGGCGAA 60.181 39.130 0.00 0.00 35.47 4.70
6956 7226 2.362397 TGGCAAAATTAACAACTGGCGA 59.638 40.909 0.00 0.00 35.47 5.54
7009 7279 6.214191 TGAACCACTGAACAAGCATTTAAA 57.786 33.333 0.00 0.00 0.00 1.52
7140 7412 5.648092 AGGTTAAGAAGTGCATACCATTGAC 59.352 40.000 0.00 0.00 0.00 3.18
7295 7568 7.203910 CAGCCTCTTTGTAGTAATAACTCGAT 58.796 38.462 0.00 0.00 37.15 3.59
7430 7703 6.985188 TGAGCAATTCTTACCTGAACATAC 57.015 37.500 0.00 0.00 0.00 2.39
7475 7748 2.092429 TGGAGAAAGTGTCAGCAAACCT 60.092 45.455 0.00 0.00 0.00 3.50
7587 7860 9.639601 CCATCCTAAATAAAAGAACAAAGGAAC 57.360 33.333 0.00 0.00 35.63 3.62
7600 7873 4.444306 CCTCCGAGTGCCATCCTAAATAAA 60.444 45.833 0.00 0.00 0.00 1.40
7601 7874 3.071023 CCTCCGAGTGCCATCCTAAATAA 59.929 47.826 0.00 0.00 0.00 1.40
7602 7875 2.632996 CCTCCGAGTGCCATCCTAAATA 59.367 50.000 0.00 0.00 0.00 1.40
7603 7876 1.417890 CCTCCGAGTGCCATCCTAAAT 59.582 52.381 0.00 0.00 0.00 1.40
7618 7891 1.276421 AGAACAGTGACAATCCCTCCG 59.724 52.381 0.00 0.00 0.00 4.63
7801 8076 3.942130 AAAAGCATCCTTGGCTGTAAC 57.058 42.857 0.00 0.00 41.66 2.50
7994 8269 2.899900 AGAACATGTGCAGTCCTAGTCA 59.100 45.455 6.60 0.00 0.00 3.41
8009 8284 5.651530 ACATATTCAGACGACGAAGAACAT 58.348 37.500 0.00 0.00 0.00 2.71
8017 8292 4.283678 GAGAGGAACATATTCAGACGACG 58.716 47.826 0.00 0.00 36.46 5.12
8018 8293 4.098044 TGGAGAGGAACATATTCAGACGAC 59.902 45.833 0.00 0.00 36.46 4.34
8027 8302 2.224719 GCTGCCATGGAGAGGAACATAT 60.225 50.000 18.40 0.00 0.00 1.78
8091 8366 1.301479 AAAGCCCTCCAACGTCGAC 60.301 57.895 5.18 5.18 0.00 4.20
8130 8405 2.100197 CCTCACTCCTCGTGGTATTCA 58.900 52.381 2.99 0.00 43.94 2.57
8213 8491 1.155424 TCCGTGACGACAACCTTTGC 61.155 55.000 6.54 0.00 0.00 3.68
8214 8492 0.859232 CTCCGTGACGACAACCTTTG 59.141 55.000 6.54 0.00 0.00 2.77
8230 8508 2.646798 AGGGCATATCAAAGGATCCTCC 59.353 50.000 16.52 9.07 34.89 4.30
8252 8530 0.182537 ACCAGCAAGTGCCTTGTGTA 59.817 50.000 14.04 0.00 42.77 2.90
8340 8618 0.470766 GGGTACATGCCGGTCCATTA 59.529 55.000 1.90 0.00 0.00 1.90
8430 8716 9.436957 CCTAAAGATGTAACTTTCAGTACACAT 57.563 33.333 0.00 4.52 40.09 3.21
8456 8742 1.922570 ATGACAACGCCGTATCAGTC 58.077 50.000 9.58 7.45 0.00 3.51
8623 8956 5.153513 CAGTGTTATAAGTGCATTGCGTTT 58.846 37.500 3.84 3.61 0.00 3.60
8713 9046 4.265056 AACCGAACAGGGCCGCTT 62.265 61.111 0.00 0.00 46.96 4.68
8716 9049 2.742372 CTCAACCGAACAGGGCCG 60.742 66.667 0.00 0.00 46.96 6.13
8717 9050 3.056328 GCTCAACCGAACAGGGCC 61.056 66.667 0.00 0.00 46.96 5.80
8718 9051 1.244019 AATGCTCAACCGAACAGGGC 61.244 55.000 0.00 0.00 46.96 5.19
8719 9052 0.523072 CAATGCTCAACCGAACAGGG 59.477 55.000 0.00 0.00 46.96 4.45
8722 9055 1.522668 CTCCAATGCTCAACCGAACA 58.477 50.000 0.00 0.00 0.00 3.18
8723 9056 0.804989 CCTCCAATGCTCAACCGAAC 59.195 55.000 0.00 0.00 0.00 3.95
8726 9059 0.107017 ATCCCTCCAATGCTCAACCG 60.107 55.000 0.00 0.00 0.00 4.44
8727 9060 2.149973 AATCCCTCCAATGCTCAACC 57.850 50.000 0.00 0.00 0.00 3.77
8728 9061 4.248058 CAAAAATCCCTCCAATGCTCAAC 58.752 43.478 0.00 0.00 0.00 3.18
8729 9062 3.261390 CCAAAAATCCCTCCAATGCTCAA 59.739 43.478 0.00 0.00 0.00 3.02
8731 9064 3.099141 TCCAAAAATCCCTCCAATGCTC 58.901 45.455 0.00 0.00 0.00 4.26
8732 9065 3.102204 CTCCAAAAATCCCTCCAATGCT 58.898 45.455 0.00 0.00 0.00 3.79
8733 9066 2.169144 CCTCCAAAAATCCCTCCAATGC 59.831 50.000 0.00 0.00 0.00 3.56
8734 9067 2.767960 CCCTCCAAAAATCCCTCCAATG 59.232 50.000 0.00 0.00 0.00 2.82
8776 9126 1.032114 GGGATTTTGTGGAGCCGGAG 61.032 60.000 5.05 0.00 0.00 4.63
8777 9127 1.001393 GGGATTTTGTGGAGCCGGA 60.001 57.895 5.05 0.00 0.00 5.14
8778 9128 2.406616 CGGGATTTTGTGGAGCCGG 61.407 63.158 0.00 0.00 0.00 6.13
8780 9130 2.885113 GCGGGATTTTGTGGAGCC 59.115 61.111 0.00 0.00 0.00 4.70
8781 9131 2.485122 CGCGGGATTTTGTGGAGC 59.515 61.111 0.00 0.00 0.00 4.70
8782 9132 1.982073 GAGCGCGGGATTTTGTGGAG 61.982 60.000 8.83 0.00 0.00 3.86
8783 9133 2.033448 AGCGCGGGATTTTGTGGA 59.967 55.556 8.83 0.00 0.00 4.02
8784 9134 2.040544 AGAGCGCGGGATTTTGTGG 61.041 57.895 8.83 0.00 0.00 4.17
8785 9135 1.135315 CAGAGCGCGGGATTTTGTG 59.865 57.895 8.83 0.00 0.00 3.33
8786 9136 2.040544 CCAGAGCGCGGGATTTTGT 61.041 57.895 8.83 0.00 0.00 2.83
8787 9137 2.793946 CCAGAGCGCGGGATTTTG 59.206 61.111 8.83 0.00 0.00 2.44
8788 9138 3.134127 GCCAGAGCGCGGGATTTT 61.134 61.111 18.07 0.00 0.00 1.82
8789 9139 4.101448 AGCCAGAGCGCGGGATTT 62.101 61.111 18.07 0.00 46.67 2.17
8790 9140 4.537433 GAGCCAGAGCGCGGGATT 62.537 66.667 18.07 6.49 46.67 3.01
8795 9145 4.869440 CAGAGGAGCCAGAGCGCG 62.869 72.222 0.00 0.00 46.67 6.86
8796 9146 3.429080 CTCAGAGGAGCCAGAGCGC 62.429 68.421 0.00 0.00 46.67 5.92
8797 9147 2.806929 CTCAGAGGAGCCAGAGCG 59.193 66.667 0.00 0.00 46.67 5.03
8805 9155 2.493973 GGAGCACGCTCAGAGGAG 59.506 66.667 20.02 0.00 44.40 3.69
8806 9156 3.071206 GGGAGCACGCTCAGAGGA 61.071 66.667 20.02 0.00 44.40 3.71
8807 9157 3.385384 TGGGAGCACGCTCAGAGG 61.385 66.667 20.02 0.00 44.40 3.69
8811 9161 3.695606 GGAGTGGGAGCACGCTCA 61.696 66.667 20.02 0.00 46.97 4.26
8817 9167 0.547471 TGGATTGAGGAGTGGGAGCA 60.547 55.000 0.00 0.00 0.00 4.26
8839 9189 0.877743 GCTCCTTTTCTGCCTCACAC 59.122 55.000 0.00 0.00 0.00 3.82
8841 9191 1.163554 CAGCTCCTTTTCTGCCTCAC 58.836 55.000 0.00 0.00 0.00 3.51
8861 9211 2.358737 AGGAAAAGTGGCGCTCCG 60.359 61.111 7.64 0.00 32.91 4.63
8874 9224 1.757118 CATAGGTCAAGGAGCGAGGAA 59.243 52.381 0.00 0.00 35.00 3.36
8875 9225 1.063942 TCATAGGTCAAGGAGCGAGGA 60.064 52.381 0.00 0.00 35.00 3.71
8876 9226 1.067821 GTCATAGGTCAAGGAGCGAGG 59.932 57.143 0.00 0.00 35.00 4.63
8879 9229 2.287909 GCTAGTCATAGGTCAAGGAGCG 60.288 54.545 0.00 0.00 35.00 5.03
8880 9230 2.962421 AGCTAGTCATAGGTCAAGGAGC 59.038 50.000 0.00 0.00 34.65 4.70
8888 9238 1.611519 GGAGCGAGCTAGTCATAGGT 58.388 55.000 0.00 0.00 42.40 3.08
8909 9259 1.156645 GCGGAGTTAGCAGCATGGAG 61.157 60.000 0.00 0.00 35.86 3.86
8920 9270 3.194861 CAATGAAATCTCCGCGGAGTTA 58.805 45.455 44.61 32.19 42.49 2.24
8968 9318 5.852282 ACTGCCACACTTTTAAATGACTT 57.148 34.783 8.00 0.00 0.00 3.01
8969 9319 5.240844 GGTACTGCCACACTTTTAAATGACT 59.759 40.000 8.00 0.00 37.17 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.