Multiple sequence alignment - TraesCS6D01G094700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G094700 chr6D 100.000 3584 0 0 1 3584 59090084 59086501 0.000000e+00 6619.0
1 TraesCS6D01G094700 chr6D 89.469 2203 158 42 521 2672 408157575 408155396 0.000000e+00 2715.0
2 TraesCS6D01G094700 chr6D 90.257 1088 93 7 1597 2683 420568523 420567448 0.000000e+00 1410.0
3 TraesCS6D01G094700 chr6D 90.065 1077 98 2 1597 2673 420559889 420560956 0.000000e+00 1387.0
4 TraesCS6D01G094700 chr6D 93.078 549 35 3 1001 1547 420559264 420559811 0.000000e+00 800.0
5 TraesCS6D01G094700 chr6D 93.156 526 34 2 999 1523 420569155 420568631 0.000000e+00 771.0
6 TraesCS6D01G094700 chr6D 96.069 407 16 0 4 410 387057135 387056729 0.000000e+00 664.0
7 TraesCS6D01G094700 chr6D 85.106 141 14 3 593 727 420558897 420559036 1.740000e-28 137.0
8 TraesCS6D01G094700 chr6A 89.951 2846 207 40 440 3250 553913858 553911057 0.000000e+00 3598.0
9 TraesCS6D01G094700 chr6A 92.214 1721 111 14 922 2627 553767050 553765338 0.000000e+00 2414.0
10 TraesCS6D01G094700 chr6A 90.674 1083 88 8 1596 2673 563485400 563486474 0.000000e+00 1428.0
11 TraesCS6D01G094700 chr6A 94.063 539 28 4 999 1534 563484764 563485301 0.000000e+00 815.0
12 TraesCS6D01G094700 chr6A 90.663 332 29 1 3253 3584 553911010 553910681 1.180000e-119 440.0
13 TraesCS6D01G094700 chr6A 82.836 268 22 12 540 784 563484354 563484620 6.020000e-53 219.0
14 TraesCS6D01G094700 chr6A 81.548 168 18 7 549 712 553767279 553767121 3.760000e-25 126.0
15 TraesCS6D01G094700 chr6B 90.022 2265 150 38 526 2753 612745634 612743409 0.000000e+00 2861.0
16 TraesCS6D01G094700 chr6B 91.763 1821 115 14 922 2741 612271513 612269727 0.000000e+00 2499.0
17 TraesCS6D01G094700 chr6B 88.928 1716 147 23 999 2683 633730677 633732380 0.000000e+00 2076.0
18 TraesCS6D01G094700 chr6B 81.569 255 21 8 543 787 633730298 633730536 1.700000e-43 187.0
19 TraesCS6D01G094700 chr6B 91.781 73 4 2 524 595 612271920 612271849 2.280000e-17 100.0
20 TraesCS6D01G094700 chr6B 86.842 76 5 3 2594 2668 612269334 612269263 2.970000e-11 80.5
21 TraesCS6D01G094700 chr3D 95.332 407 19 0 4 410 123690903 123690497 0.000000e+00 647.0
22 TraesCS6D01G094700 chr3D 95.086 407 20 0 1 407 15912220 15912626 3.020000e-180 641.0
23 TraesCS6D01G094700 chr2D 95.332 407 19 0 4 410 12804124 12803718 0.000000e+00 647.0
24 TraesCS6D01G094700 chr2D 94.595 407 21 1 4 410 79535465 79535060 2.350000e-176 628.0
25 TraesCS6D01G094700 chr2D 94.349 407 14 3 1 407 484075544 484075941 1.830000e-172 616.0
26 TraesCS6D01G094700 chr2D 100.000 33 0 0 408 440 20177885 20177853 1.070000e-05 62.1
27 TraesCS6D01G094700 chr2D 96.970 33 1 0 408 440 6175516 6175548 5.000000e-04 56.5
28 TraesCS6D01G094700 chr7D 95.332 407 17 2 4 410 123310809 123310405 0.000000e+00 645.0
29 TraesCS6D01G094700 chr7A 94.840 407 21 0 4 410 720910741 720910335 1.400000e-178 636.0
30 TraesCS6D01G094700 chr7A 100.000 33 0 0 408 440 1765471 1765503 1.070000e-05 62.1
31 TraesCS6D01G094700 chr7A 100.000 33 0 0 408 440 1785767 1785799 1.070000e-05 62.1
32 TraesCS6D01G094700 chr7A 100.000 33 0 0 408 440 1805302 1805334 1.070000e-05 62.1
33 TraesCS6D01G094700 chr7A 100.000 33 0 0 408 440 1825647 1825679 1.070000e-05 62.1
34 TraesCS6D01G094700 chr5D 94.840 407 21 0 4 410 427150181 427149775 1.400000e-178 636.0
35 TraesCS6D01G094700 chr5D 84.428 411 45 12 1 407 545542838 545543233 1.560000e-103 387.0
36 TraesCS6D01G094700 chr3B 81.951 410 46 13 4 407 776868616 776868229 4.460000e-84 322.0
37 TraesCS6D01G094700 chr7B 100.000 33 0 0 408 440 381959378 381959410 1.070000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G094700 chr6D 59086501 59090084 3583 True 6619.000000 6619 100.000000 1 3584 1 chr6D.!!$R1 3583
1 TraesCS6D01G094700 chr6D 408155396 408157575 2179 True 2715.000000 2715 89.469000 521 2672 1 chr6D.!!$R3 2151
2 TraesCS6D01G094700 chr6D 420567448 420569155 1707 True 1090.500000 1410 91.706500 999 2683 2 chr6D.!!$R4 1684
3 TraesCS6D01G094700 chr6D 420558897 420560956 2059 False 774.666667 1387 89.416333 593 2673 3 chr6D.!!$F1 2080
4 TraesCS6D01G094700 chr6A 553910681 553913858 3177 True 2019.000000 3598 90.307000 440 3584 2 chr6A.!!$R2 3144
5 TraesCS6D01G094700 chr6A 553765338 553767279 1941 True 1270.000000 2414 86.881000 549 2627 2 chr6A.!!$R1 2078
6 TraesCS6D01G094700 chr6A 563484354 563486474 2120 False 820.666667 1428 89.191000 540 2673 3 chr6A.!!$F1 2133
7 TraesCS6D01G094700 chr6B 612743409 612745634 2225 True 2861.000000 2861 90.022000 526 2753 1 chr6B.!!$R1 2227
8 TraesCS6D01G094700 chr6B 633730298 633732380 2082 False 1131.500000 2076 85.248500 543 2683 2 chr6B.!!$F1 2140
9 TraesCS6D01G094700 chr6B 612269263 612271920 2657 True 893.166667 2499 90.128667 524 2741 3 chr6B.!!$R2 2217


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.036765 AAATCGAAGTGGCCGCACTA 60.037 50.0 20.59 4.63 34.56 2.74 F
235 236 0.102844 CCTGCTCTGCTGCTCTACTC 59.897 60.0 0.00 0.00 0.00 2.59 F
410 411 0.105039 CTCCTGACCGGTTGATAGCC 59.895 60.0 9.42 0.00 0.00 3.93 F
2334 2598 0.036732 TGATCAGCTGGCCGTTCTTT 59.963 50.0 15.13 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 2211 1.153086 GCTGAGGTTGATGGCCGAT 60.153 57.895 0.00 0.00 0.0 4.18 R
2064 2328 1.073025 AAACTCCACCATCTGCGCA 59.927 52.632 10.98 10.98 0.0 6.09 R
2361 2625 1.303561 GCCCCACTCATTGCACTGA 60.304 57.895 6.58 6.58 0.0 3.41 R
3173 3624 0.251832 AAGGGTGGCGAGAAGAGAGA 60.252 55.000 0.00 0.00 0.0 3.10 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.168773 TAGCCCAAATCGAAGTGGC 57.831 52.632 11.38 10.56 42.48 5.01
19 20 0.393808 TAGCCCAAATCGAAGTGGCC 60.394 55.000 11.38 0.00 43.18 5.36
20 21 3.051392 GCCCAAATCGAAGTGGCCG 62.051 63.158 11.38 1.97 36.07 6.13
21 22 2.485122 CCAAATCGAAGTGGCCGC 59.515 61.111 8.71 8.71 0.00 6.53
22 23 2.331893 CCAAATCGAAGTGGCCGCA 61.332 57.895 20.59 0.00 0.00 5.69
23 24 1.154225 CAAATCGAAGTGGCCGCAC 60.154 57.895 20.59 11.16 0.00 5.34
24 25 1.302511 AAATCGAAGTGGCCGCACT 60.303 52.632 20.59 4.11 36.92 4.40
25 26 0.036765 AAATCGAAGTGGCCGCACTA 60.037 50.000 20.59 4.63 34.56 2.74
26 27 0.178068 AATCGAAGTGGCCGCACTAT 59.822 50.000 20.59 6.87 34.56 2.12
27 28 0.530650 ATCGAAGTGGCCGCACTATG 60.531 55.000 20.59 3.79 34.56 2.23
28 29 1.447838 CGAAGTGGCCGCACTATGT 60.448 57.895 20.59 0.00 34.56 2.29
29 30 1.421410 CGAAGTGGCCGCACTATGTC 61.421 60.000 20.59 1.26 34.56 3.06
30 31 1.078426 AAGTGGCCGCACTATGTCC 60.078 57.895 20.59 0.00 34.56 4.02
31 32 1.836999 AAGTGGCCGCACTATGTCCA 61.837 55.000 20.59 0.00 34.56 4.02
32 33 2.106683 GTGGCCGCACTATGTCCAC 61.107 63.158 12.58 0.00 40.13 4.02
33 34 2.513897 GGCCGCACTATGTCCACC 60.514 66.667 0.00 0.00 0.00 4.61
34 35 2.584608 GCCGCACTATGTCCACCT 59.415 61.111 0.00 0.00 0.00 4.00
35 36 1.078426 GCCGCACTATGTCCACCTT 60.078 57.895 0.00 0.00 0.00 3.50
36 37 0.676782 GCCGCACTATGTCCACCTTT 60.677 55.000 0.00 0.00 0.00 3.11
37 38 1.369625 CCGCACTATGTCCACCTTTC 58.630 55.000 0.00 0.00 0.00 2.62
38 39 0.999406 CGCACTATGTCCACCTTTCG 59.001 55.000 0.00 0.00 0.00 3.46
39 40 1.403647 CGCACTATGTCCACCTTTCGA 60.404 52.381 0.00 0.00 0.00 3.71
40 41 2.738643 CGCACTATGTCCACCTTTCGAT 60.739 50.000 0.00 0.00 0.00 3.59
41 42 2.609459 GCACTATGTCCACCTTTCGATG 59.391 50.000 0.00 0.00 0.00 3.84
42 43 3.861840 CACTATGTCCACCTTTCGATGT 58.138 45.455 0.00 0.00 0.00 3.06
43 44 3.618594 CACTATGTCCACCTTTCGATGTG 59.381 47.826 0.00 0.00 0.00 3.21
44 45 3.513912 ACTATGTCCACCTTTCGATGTGA 59.486 43.478 10.73 0.00 34.37 3.58
45 46 2.455674 TGTCCACCTTTCGATGTGAG 57.544 50.000 10.73 3.35 34.37 3.51
46 47 1.001974 TGTCCACCTTTCGATGTGAGG 59.998 52.381 10.73 7.28 34.37 3.86
47 48 0.613260 TCCACCTTTCGATGTGAGGG 59.387 55.000 10.73 0.00 34.81 4.30
48 49 1.026718 CCACCTTTCGATGTGAGGGC 61.027 60.000 10.73 0.00 34.81 5.19
49 50 1.079127 ACCTTTCGATGTGAGGGCG 60.079 57.895 8.81 0.00 34.81 6.13
50 51 1.218047 CCTTTCGATGTGAGGGCGA 59.782 57.895 0.00 0.00 0.00 5.54
51 52 1.084370 CCTTTCGATGTGAGGGCGAC 61.084 60.000 0.00 0.00 33.33 5.19
52 53 0.389817 CTTTCGATGTGAGGGCGACA 60.390 55.000 0.00 0.00 33.33 4.35
53 54 0.249120 TTTCGATGTGAGGGCGACAT 59.751 50.000 0.00 0.00 36.73 3.06
54 55 0.249120 TTCGATGTGAGGGCGACATT 59.751 50.000 0.00 0.00 34.10 2.71
55 56 0.179111 TCGATGTGAGGGCGACATTC 60.179 55.000 0.00 0.00 34.10 2.67
56 57 0.179100 CGATGTGAGGGCGACATTCT 60.179 55.000 0.00 0.00 34.10 2.40
57 58 1.740380 CGATGTGAGGGCGACATTCTT 60.740 52.381 0.00 0.00 34.10 2.52
58 59 1.936547 GATGTGAGGGCGACATTCTTC 59.063 52.381 0.00 0.00 34.10 2.87
59 60 0.976641 TGTGAGGGCGACATTCTTCT 59.023 50.000 0.00 0.00 0.00 2.85
60 61 2.176045 TGTGAGGGCGACATTCTTCTA 58.824 47.619 0.00 0.00 0.00 2.10
61 62 2.166459 TGTGAGGGCGACATTCTTCTAG 59.834 50.000 0.00 0.00 0.00 2.43
62 63 1.137086 TGAGGGCGACATTCTTCTAGC 59.863 52.381 0.00 0.00 0.00 3.42
63 64 1.410882 GAGGGCGACATTCTTCTAGCT 59.589 52.381 0.00 0.00 0.00 3.32
64 65 1.410882 AGGGCGACATTCTTCTAGCTC 59.589 52.381 0.00 0.00 0.00 4.09
65 66 1.410882 GGGCGACATTCTTCTAGCTCT 59.589 52.381 0.00 0.00 0.00 4.09
66 67 2.623889 GGGCGACATTCTTCTAGCTCTA 59.376 50.000 0.00 0.00 0.00 2.43
67 68 3.305064 GGGCGACATTCTTCTAGCTCTAG 60.305 52.174 0.00 0.00 34.56 2.43
68 69 3.566322 GGCGACATTCTTCTAGCTCTAGA 59.434 47.826 2.65 2.65 40.17 2.43
69 70 4.320202 GGCGACATTCTTCTAGCTCTAGAG 60.320 50.000 15.85 15.85 42.50 2.43
70 71 4.274950 GCGACATTCTTCTAGCTCTAGAGT 59.725 45.833 20.75 10.28 42.50 3.24
71 72 5.747565 CGACATTCTTCTAGCTCTAGAGTG 58.252 45.833 20.75 10.12 42.50 3.51
72 73 5.525745 CGACATTCTTCTAGCTCTAGAGTGA 59.474 44.000 20.75 13.42 42.50 3.41
73 74 6.292865 CGACATTCTTCTAGCTCTAGAGTGAG 60.293 46.154 20.75 16.86 42.50 3.51
83 84 4.955925 CTCTAGAGTGAGCTTCTCGAAA 57.044 45.455 11.89 4.38 37.07 3.46
84 85 5.499139 CTCTAGAGTGAGCTTCTCGAAAT 57.501 43.478 11.89 1.34 37.07 2.17
85 86 5.493133 TCTAGAGTGAGCTTCTCGAAATC 57.507 43.478 12.12 0.00 37.07 2.17
86 87 3.518634 AGAGTGAGCTTCTCGAAATCC 57.481 47.619 12.12 0.00 37.07 3.01
87 88 2.167487 AGAGTGAGCTTCTCGAAATCCC 59.833 50.000 12.12 0.00 37.07 3.85
88 89 1.134965 AGTGAGCTTCTCGAAATCCCG 60.135 52.381 0.00 0.00 32.35 5.14
89 90 1.135083 GTGAGCTTCTCGAAATCCCGA 60.135 52.381 0.00 0.00 37.03 5.14
90 91 1.135083 TGAGCTTCTCGAAATCCCGAC 60.135 52.381 0.00 0.00 34.56 4.79
91 92 0.179134 AGCTTCTCGAAATCCCGACG 60.179 55.000 0.00 0.00 34.56 5.12
92 93 1.146358 GCTTCTCGAAATCCCGACGG 61.146 60.000 6.99 6.99 34.56 4.79
93 94 0.172803 CTTCTCGAAATCCCGACGGT 59.827 55.000 13.94 0.00 34.56 4.83
94 95 0.108992 TTCTCGAAATCCCGACGGTG 60.109 55.000 13.94 4.52 34.56 4.94
95 96 2.125832 TCGAAATCCCGACGGTGC 60.126 61.111 13.94 0.00 33.14 5.01
96 97 3.550992 CGAAATCCCGACGGTGCG 61.551 66.667 13.94 0.38 0.00 5.34
124 125 4.256180 GCCATGGCGAGGGGGTAG 62.256 72.222 23.48 0.00 0.00 3.18
125 126 3.560251 CCATGGCGAGGGGGTAGG 61.560 72.222 0.00 0.00 0.00 3.18
126 127 3.560251 CATGGCGAGGGGGTAGGG 61.560 72.222 0.00 0.00 0.00 3.53
127 128 4.103928 ATGGCGAGGGGGTAGGGT 62.104 66.667 0.00 0.00 0.00 4.34
128 129 4.791069 TGGCGAGGGGGTAGGGTC 62.791 72.222 0.00 0.00 0.00 4.46
134 135 2.792951 GGGGGTAGGGTCCCTCTT 59.207 66.667 15.84 0.00 44.41 2.85
135 136 1.384222 GGGGGTAGGGTCCCTCTTC 60.384 68.421 15.84 6.42 44.41 2.87
136 137 1.761271 GGGGTAGGGTCCCTCTTCG 60.761 68.421 15.84 0.00 46.27 3.79
137 138 1.761271 GGGTAGGGTCCCTCTTCGG 60.761 68.421 15.84 0.00 43.85 4.30
138 139 1.001376 GGTAGGGTCCCTCTTCGGT 59.999 63.158 15.84 0.00 34.61 4.69
139 140 1.328430 GGTAGGGTCCCTCTTCGGTG 61.328 65.000 15.84 0.00 34.61 4.94
140 141 0.324091 GTAGGGTCCCTCTTCGGTGA 60.324 60.000 15.84 0.00 34.61 4.02
141 142 0.635009 TAGGGTCCCTCTTCGGTGAT 59.365 55.000 15.84 0.00 34.61 3.06
142 143 0.635009 AGGGTCCCTCTTCGGTGATA 59.365 55.000 3.85 0.00 0.00 2.15
143 144 1.041437 GGGTCCCTCTTCGGTGATAG 58.959 60.000 0.00 0.00 0.00 2.08
144 145 1.411216 GGGTCCCTCTTCGGTGATAGA 60.411 57.143 0.00 0.00 0.00 1.98
145 146 1.957877 GGTCCCTCTTCGGTGATAGAG 59.042 57.143 0.00 0.00 38.08 2.43
146 147 2.423088 GGTCCCTCTTCGGTGATAGAGA 60.423 54.545 0.00 0.00 40.24 3.10
147 148 3.492337 GTCCCTCTTCGGTGATAGAGAT 58.508 50.000 0.00 0.00 40.24 2.75
148 149 3.254657 GTCCCTCTTCGGTGATAGAGATG 59.745 52.174 0.00 0.00 40.24 2.90
149 150 2.560542 CCCTCTTCGGTGATAGAGATGG 59.439 54.545 0.00 0.00 40.24 3.51
150 151 3.491342 CCTCTTCGGTGATAGAGATGGA 58.509 50.000 0.00 0.00 40.24 3.41
151 152 3.891977 CCTCTTCGGTGATAGAGATGGAA 59.108 47.826 0.00 0.00 40.24 3.53
152 153 4.022416 CCTCTTCGGTGATAGAGATGGAAG 60.022 50.000 0.00 0.00 40.24 3.46
153 154 4.793201 TCTTCGGTGATAGAGATGGAAGA 58.207 43.478 0.00 0.00 36.89 2.87
154 155 5.389520 TCTTCGGTGATAGAGATGGAAGAT 58.610 41.667 0.00 0.00 35.00 2.40
155 156 5.242615 TCTTCGGTGATAGAGATGGAAGATG 59.757 44.000 0.00 0.00 35.00 2.90
156 157 4.474394 TCGGTGATAGAGATGGAAGATGT 58.526 43.478 0.00 0.00 0.00 3.06
157 158 4.895889 TCGGTGATAGAGATGGAAGATGTT 59.104 41.667 0.00 0.00 0.00 2.71
158 159 4.987285 CGGTGATAGAGATGGAAGATGTTG 59.013 45.833 0.00 0.00 0.00 3.33
159 160 5.452496 CGGTGATAGAGATGGAAGATGTTGT 60.452 44.000 0.00 0.00 0.00 3.32
160 161 6.352516 GGTGATAGAGATGGAAGATGTTGTT 58.647 40.000 0.00 0.00 0.00 2.83
161 162 6.481644 GGTGATAGAGATGGAAGATGTTGTTC 59.518 42.308 0.00 0.00 0.00 3.18
162 163 6.481644 GTGATAGAGATGGAAGATGTTGTTCC 59.518 42.308 0.00 0.00 43.45 3.62
163 164 4.227864 AGAGATGGAAGATGTTGTTCCC 57.772 45.455 1.45 0.00 42.63 3.97
164 165 3.054065 AGAGATGGAAGATGTTGTTCCCC 60.054 47.826 1.45 0.00 42.63 4.81
165 166 2.922283 AGATGGAAGATGTTGTTCCCCT 59.078 45.455 1.45 0.00 42.63 4.79
166 167 3.334881 AGATGGAAGATGTTGTTCCCCTT 59.665 43.478 1.45 0.00 42.63 3.95
167 168 3.154827 TGGAAGATGTTGTTCCCCTTC 57.845 47.619 1.45 0.00 42.63 3.46
168 169 2.716424 TGGAAGATGTTGTTCCCCTTCT 59.284 45.455 0.00 0.00 42.63 2.85
169 170 3.140144 TGGAAGATGTTGTTCCCCTTCTT 59.860 43.478 0.00 0.00 42.63 2.52
170 171 3.759086 GGAAGATGTTGTTCCCCTTCTTC 59.241 47.826 0.00 0.00 38.03 2.87
171 172 4.507512 GGAAGATGTTGTTCCCCTTCTTCT 60.508 45.833 9.54 0.00 39.73 2.85
172 173 4.293662 AGATGTTGTTCCCCTTCTTCTC 57.706 45.455 0.00 0.00 0.00 2.87
173 174 3.913163 AGATGTTGTTCCCCTTCTTCTCT 59.087 43.478 0.00 0.00 0.00 3.10
174 175 5.094387 AGATGTTGTTCCCCTTCTTCTCTA 58.906 41.667 0.00 0.00 0.00 2.43
175 176 4.891992 TGTTGTTCCCCTTCTTCTCTAG 57.108 45.455 0.00 0.00 0.00 2.43
176 177 3.583086 TGTTGTTCCCCTTCTTCTCTAGG 59.417 47.826 0.00 0.00 0.00 3.02
177 178 3.562108 TGTTCCCCTTCTTCTCTAGGT 57.438 47.619 0.00 0.00 0.00 3.08
178 179 3.173965 TGTTCCCCTTCTTCTCTAGGTG 58.826 50.000 0.00 0.00 0.00 4.00
179 180 3.174779 GTTCCCCTTCTTCTCTAGGTGT 58.825 50.000 0.00 0.00 0.00 4.16
180 181 3.562108 TCCCCTTCTTCTCTAGGTGTT 57.438 47.619 0.00 0.00 0.00 3.32
181 182 3.442076 TCCCCTTCTTCTCTAGGTGTTC 58.558 50.000 0.00 0.00 0.00 3.18
182 183 2.502130 CCCCTTCTTCTCTAGGTGTTCC 59.498 54.545 0.00 0.00 0.00 3.62
184 185 3.196685 CCCTTCTTCTCTAGGTGTTCCTG 59.803 52.174 0.00 0.00 44.81 3.86
185 186 3.196685 CCTTCTTCTCTAGGTGTTCCTGG 59.803 52.174 0.00 0.00 44.81 4.45
186 187 3.827817 TCTTCTCTAGGTGTTCCTGGA 57.172 47.619 0.00 0.00 46.64 3.86
189 190 3.786495 TCTAGGTGTTCCTGGAGCA 57.214 52.632 9.35 9.35 44.54 4.26
190 191 2.254152 TCTAGGTGTTCCTGGAGCAT 57.746 50.000 16.48 4.28 44.54 3.79
191 192 1.833630 TCTAGGTGTTCCTGGAGCATG 59.166 52.381 16.48 7.74 44.54 4.06
192 193 0.911769 TAGGTGTTCCTGGAGCATGG 59.088 55.000 16.48 0.00 44.81 3.66
193 194 2.048603 GGTGTTCCTGGAGCATGGC 61.049 63.158 16.48 3.95 0.00 4.40
194 195 2.048603 GTGTTCCTGGAGCATGGCC 61.049 63.158 16.48 0.00 0.00 5.36
195 196 2.356278 GTTCCTGGAGCATGGCCA 59.644 61.111 8.56 8.56 0.00 5.36
196 197 1.076485 GTTCCTGGAGCATGGCCAT 60.076 57.895 14.09 14.09 34.33 4.40
197 198 1.105759 GTTCCTGGAGCATGGCCATC 61.106 60.000 17.61 11.15 34.33 3.51
198 199 1.284111 TTCCTGGAGCATGGCCATCT 61.284 55.000 17.61 16.03 34.33 2.90
199 200 1.229359 CCTGGAGCATGGCCATCTT 59.771 57.895 17.61 6.75 34.33 2.40
200 201 0.822532 CCTGGAGCATGGCCATCTTC 60.823 60.000 17.61 15.91 34.33 2.87
201 202 1.153107 TGGAGCATGGCCATCTTCG 60.153 57.895 17.61 5.75 0.00 3.79
202 203 1.146930 GGAGCATGGCCATCTTCGA 59.853 57.895 17.61 0.00 0.00 3.71
203 204 0.464373 GGAGCATGGCCATCTTCGAA 60.464 55.000 17.61 0.00 0.00 3.71
204 205 1.382522 GAGCATGGCCATCTTCGAAA 58.617 50.000 17.61 0.00 0.00 3.46
205 206 1.332997 GAGCATGGCCATCTTCGAAAG 59.667 52.381 17.61 2.77 0.00 2.62
206 207 1.098050 GCATGGCCATCTTCGAAAGT 58.902 50.000 17.61 0.00 0.00 2.66
207 208 1.064654 GCATGGCCATCTTCGAAAGTC 59.935 52.381 17.61 0.00 0.00 3.01
208 209 1.328680 CATGGCCATCTTCGAAAGTCG 59.671 52.381 17.61 0.00 42.10 4.18
209 210 0.391130 TGGCCATCTTCGAAAGTCGG 60.391 55.000 0.00 0.00 40.88 4.79
210 211 1.706287 GGCCATCTTCGAAAGTCGGC 61.706 60.000 15.55 15.55 42.37 5.54
211 212 0.741221 GCCATCTTCGAAAGTCGGCT 60.741 55.000 16.25 0.00 40.88 5.52
212 213 1.470979 GCCATCTTCGAAAGTCGGCTA 60.471 52.381 16.25 0.00 40.88 3.93
213 214 2.803492 GCCATCTTCGAAAGTCGGCTAT 60.803 50.000 16.25 0.00 40.88 2.97
214 215 2.797156 CCATCTTCGAAAGTCGGCTATG 59.203 50.000 0.00 0.00 40.88 2.23
215 216 3.448686 CATCTTCGAAAGTCGGCTATGT 58.551 45.455 0.00 0.00 40.88 2.29
216 217 3.146618 TCTTCGAAAGTCGGCTATGTC 57.853 47.619 0.00 0.00 40.88 3.06
217 218 2.159282 TCTTCGAAAGTCGGCTATGTCC 60.159 50.000 0.00 0.00 40.88 4.02
218 219 1.471119 TCGAAAGTCGGCTATGTCCT 58.529 50.000 0.00 0.00 40.88 3.85
219 220 1.134367 TCGAAAGTCGGCTATGTCCTG 59.866 52.381 0.00 0.00 40.88 3.86
220 221 1.291132 GAAAGTCGGCTATGTCCTGC 58.709 55.000 0.00 0.00 0.00 4.85
221 222 0.905357 AAAGTCGGCTATGTCCTGCT 59.095 50.000 0.00 0.00 0.00 4.24
222 223 0.461961 AAGTCGGCTATGTCCTGCTC 59.538 55.000 0.00 0.00 0.00 4.26
223 224 0.396417 AGTCGGCTATGTCCTGCTCT 60.396 55.000 0.00 0.00 0.00 4.09
224 225 0.249238 GTCGGCTATGTCCTGCTCTG 60.249 60.000 0.00 0.00 0.00 3.35
225 226 1.593750 CGGCTATGTCCTGCTCTGC 60.594 63.158 0.00 0.00 0.00 4.26
226 227 1.828768 GGCTATGTCCTGCTCTGCT 59.171 57.895 0.00 0.00 0.00 4.24
227 228 0.532417 GGCTATGTCCTGCTCTGCTG 60.532 60.000 0.00 0.00 0.00 4.41
228 229 1.159098 GCTATGTCCTGCTCTGCTGC 61.159 60.000 0.00 0.00 0.00 5.25
229 230 0.464870 CTATGTCCTGCTCTGCTGCT 59.535 55.000 0.00 0.00 0.00 4.24
230 231 0.463204 TATGTCCTGCTCTGCTGCTC 59.537 55.000 0.00 0.00 0.00 4.26
231 232 1.266160 ATGTCCTGCTCTGCTGCTCT 61.266 55.000 0.00 0.00 0.00 4.09
232 233 0.613012 TGTCCTGCTCTGCTGCTCTA 60.613 55.000 0.00 0.00 0.00 2.43
233 234 0.179113 GTCCTGCTCTGCTGCTCTAC 60.179 60.000 0.00 0.00 0.00 2.59
234 235 0.324183 TCCTGCTCTGCTGCTCTACT 60.324 55.000 0.00 0.00 0.00 2.57
235 236 0.102844 CCTGCTCTGCTGCTCTACTC 59.897 60.000 0.00 0.00 0.00 2.59
236 237 1.105457 CTGCTCTGCTGCTCTACTCT 58.895 55.000 0.00 0.00 0.00 3.24
237 238 2.296792 CTGCTCTGCTGCTCTACTCTA 58.703 52.381 0.00 0.00 0.00 2.43
238 239 2.020720 TGCTCTGCTGCTCTACTCTAC 58.979 52.381 0.00 0.00 0.00 2.59
239 240 2.297701 GCTCTGCTGCTCTACTCTACT 58.702 52.381 0.00 0.00 0.00 2.57
240 241 3.118223 TGCTCTGCTGCTCTACTCTACTA 60.118 47.826 0.00 0.00 0.00 1.82
241 242 3.250040 GCTCTGCTGCTCTACTCTACTAC 59.750 52.174 0.00 0.00 0.00 2.73
242 243 4.447290 CTCTGCTGCTCTACTCTACTACA 58.553 47.826 0.00 0.00 0.00 2.74
243 244 5.042463 TCTGCTGCTCTACTCTACTACAT 57.958 43.478 0.00 0.00 0.00 2.29
244 245 6.176014 TCTGCTGCTCTACTCTACTACATA 57.824 41.667 0.00 0.00 0.00 2.29
245 246 6.774673 TCTGCTGCTCTACTCTACTACATAT 58.225 40.000 0.00 0.00 0.00 1.78
246 247 6.652900 TCTGCTGCTCTACTCTACTACATATG 59.347 42.308 0.00 0.00 0.00 1.78
247 248 6.534634 TGCTGCTCTACTCTACTACATATGA 58.465 40.000 10.38 0.00 0.00 2.15
248 249 7.171653 TGCTGCTCTACTCTACTACATATGAT 58.828 38.462 10.38 0.00 0.00 2.45
249 250 7.335673 TGCTGCTCTACTCTACTACATATGATC 59.664 40.741 10.38 0.00 0.00 2.92
250 251 7.201696 GCTGCTCTACTCTACTACATATGATCC 60.202 44.444 10.38 0.00 0.00 3.36
251 252 7.923461 TGCTCTACTCTACTACATATGATCCT 58.077 38.462 10.38 0.00 0.00 3.24
252 253 9.047947 TGCTCTACTCTACTACATATGATCCTA 57.952 37.037 10.38 0.00 0.00 2.94
253 254 9.542462 GCTCTACTCTACTACATATGATCCTAG 57.458 40.741 10.38 3.16 0.00 3.02
257 258 8.856153 ACTCTACTACATATGATCCTAGTGTG 57.144 38.462 10.38 5.09 0.00 3.82
258 259 7.885922 ACTCTACTACATATGATCCTAGTGTGG 59.114 40.741 10.38 4.33 0.00 4.17
259 260 7.985589 TCTACTACATATGATCCTAGTGTGGA 58.014 38.462 10.38 4.97 40.82 4.02
260 261 8.103935 TCTACTACATATGATCCTAGTGTGGAG 58.896 40.741 10.38 1.83 39.78 3.86
261 262 6.615617 ACTACATATGATCCTAGTGTGGAGT 58.384 40.000 10.38 0.46 39.78 3.85
262 263 5.798125 ACATATGATCCTAGTGTGGAGTG 57.202 43.478 10.38 0.00 39.78 3.51
263 264 4.039730 ACATATGATCCTAGTGTGGAGTGC 59.960 45.833 10.38 0.00 39.78 4.40
264 265 2.238084 TGATCCTAGTGTGGAGTGCT 57.762 50.000 0.00 0.00 39.78 4.40
265 266 2.103373 TGATCCTAGTGTGGAGTGCTC 58.897 52.381 0.00 0.00 39.78 4.26
266 267 1.066303 GATCCTAGTGTGGAGTGCTCG 59.934 57.143 0.00 0.00 39.78 5.03
267 268 0.965866 TCCTAGTGTGGAGTGCTCGG 60.966 60.000 0.00 0.00 0.00 4.63
268 269 1.153745 CTAGTGTGGAGTGCTCGGC 60.154 63.158 0.00 0.00 0.00 5.54
269 270 2.564553 CTAGTGTGGAGTGCTCGGCC 62.565 65.000 0.00 0.00 0.00 6.13
270 271 4.008933 GTGTGGAGTGCTCGGCCT 62.009 66.667 0.00 0.00 0.00 5.19
271 272 3.241530 TGTGGAGTGCTCGGCCTT 61.242 61.111 0.00 0.00 0.00 4.35
272 273 2.032681 GTGGAGTGCTCGGCCTTT 59.967 61.111 0.00 0.00 0.00 3.11
273 274 2.032528 TGGAGTGCTCGGCCTTTG 59.967 61.111 0.00 0.00 0.00 2.77
274 275 3.435186 GGAGTGCTCGGCCTTTGC 61.435 66.667 0.00 2.51 0.00 3.68
275 276 2.669569 GAGTGCTCGGCCTTTGCA 60.670 61.111 0.00 5.55 40.13 4.08
276 277 2.203337 AGTGCTCGGCCTTTGCAA 60.203 55.556 14.21 0.00 40.13 4.08
277 278 2.192608 GAGTGCTCGGCCTTTGCAAG 62.193 60.000 14.21 0.00 40.13 4.01
278 279 3.673484 TGCTCGGCCTTTGCAAGC 61.673 61.111 10.95 0.00 43.98 4.01
279 280 3.368571 GCTCGGCCTTTGCAAGCT 61.369 61.111 10.16 0.00 41.81 3.74
280 281 2.564975 CTCGGCCTTTGCAAGCTG 59.435 61.111 12.17 12.17 40.13 4.24
281 282 2.203337 TCGGCCTTTGCAAGCTGT 60.203 55.556 16.52 0.00 40.13 4.40
282 283 0.955428 CTCGGCCTTTGCAAGCTGTA 60.955 55.000 16.52 5.75 40.13 2.74
283 284 0.536233 TCGGCCTTTGCAAGCTGTAA 60.536 50.000 16.52 0.00 40.13 2.41
284 285 0.527565 CGGCCTTTGCAAGCTGTAAT 59.472 50.000 10.56 0.00 40.13 1.89
285 286 1.468054 CGGCCTTTGCAAGCTGTAATC 60.468 52.381 10.56 0.00 40.13 1.75
286 287 1.821136 GGCCTTTGCAAGCTGTAATCT 59.179 47.619 10.16 0.00 40.13 2.40
287 288 2.232208 GGCCTTTGCAAGCTGTAATCTT 59.768 45.455 10.16 0.00 40.13 2.40
288 289 3.443681 GGCCTTTGCAAGCTGTAATCTTA 59.556 43.478 10.16 0.00 40.13 2.10
289 290 4.082245 GGCCTTTGCAAGCTGTAATCTTAA 60.082 41.667 10.16 0.00 40.13 1.85
290 291 5.394553 GGCCTTTGCAAGCTGTAATCTTAAT 60.395 40.000 10.16 0.00 40.13 1.40
291 292 6.101997 GCCTTTGCAAGCTGTAATCTTAATT 58.898 36.000 0.00 0.00 37.47 1.40
292 293 6.591448 GCCTTTGCAAGCTGTAATCTTAATTT 59.409 34.615 0.00 0.00 37.47 1.82
293 294 7.201470 GCCTTTGCAAGCTGTAATCTTAATTTC 60.201 37.037 0.00 0.00 37.47 2.17
294 295 7.276438 CCTTTGCAAGCTGTAATCTTAATTTCC 59.724 37.037 0.00 0.00 0.00 3.13
295 296 7.466746 TTGCAAGCTGTAATCTTAATTTCCT 57.533 32.000 0.00 0.00 0.00 3.36
296 297 7.466746 TGCAAGCTGTAATCTTAATTTCCTT 57.533 32.000 0.00 0.00 0.00 3.36
297 298 7.895759 TGCAAGCTGTAATCTTAATTTCCTTT 58.104 30.769 0.00 0.00 0.00 3.11
298 299 8.367156 TGCAAGCTGTAATCTTAATTTCCTTTT 58.633 29.630 0.00 0.00 0.00 2.27
299 300 8.864024 GCAAGCTGTAATCTTAATTTCCTTTTC 58.136 33.333 0.00 0.00 0.00 2.29
300 301 9.912634 CAAGCTGTAATCTTAATTTCCTTTTCA 57.087 29.630 0.00 0.00 0.00 2.69
308 309 9.591792 AATCTTAATTTCCTTTTCATTAGCTGC 57.408 29.630 0.00 0.00 0.00 5.25
309 310 7.547227 TCTTAATTTCCTTTTCATTAGCTGCC 58.453 34.615 0.00 0.00 0.00 4.85
310 311 7.397192 TCTTAATTTCCTTTTCATTAGCTGCCT 59.603 33.333 0.00 0.00 0.00 4.75
311 312 4.789012 TTTCCTTTTCATTAGCTGCCTG 57.211 40.909 0.00 0.00 0.00 4.85
312 313 3.439857 TCCTTTTCATTAGCTGCCTGT 57.560 42.857 0.00 0.00 0.00 4.00
313 314 3.084039 TCCTTTTCATTAGCTGCCTGTG 58.916 45.455 0.00 0.00 0.00 3.66
314 315 3.084039 CCTTTTCATTAGCTGCCTGTGA 58.916 45.455 0.00 0.00 0.00 3.58
315 316 3.507233 CCTTTTCATTAGCTGCCTGTGAA 59.493 43.478 0.00 1.52 0.00 3.18
316 317 4.380233 CCTTTTCATTAGCTGCCTGTGAAG 60.380 45.833 0.00 0.92 32.42 3.02
317 318 2.408271 TCATTAGCTGCCTGTGAAGG 57.592 50.000 0.00 0.00 0.00 3.46
318 319 1.630369 TCATTAGCTGCCTGTGAAGGT 59.370 47.619 0.00 0.00 0.00 3.50
319 320 2.040278 TCATTAGCTGCCTGTGAAGGTT 59.960 45.455 0.00 0.00 0.00 3.50
320 321 1.896220 TTAGCTGCCTGTGAAGGTTG 58.104 50.000 0.00 0.00 0.00 3.77
321 322 0.764890 TAGCTGCCTGTGAAGGTTGT 59.235 50.000 0.00 0.00 0.00 3.32
322 323 0.764890 AGCTGCCTGTGAAGGTTGTA 59.235 50.000 0.00 0.00 0.00 2.41
323 324 1.160137 GCTGCCTGTGAAGGTTGTAG 58.840 55.000 0.00 0.00 0.00 2.74
324 325 1.543429 GCTGCCTGTGAAGGTTGTAGT 60.543 52.381 0.00 0.00 0.00 2.73
325 326 2.851195 CTGCCTGTGAAGGTTGTAGTT 58.149 47.619 0.00 0.00 0.00 2.24
326 327 3.805807 GCTGCCTGTGAAGGTTGTAGTTA 60.806 47.826 0.00 0.00 0.00 2.24
327 328 3.997021 CTGCCTGTGAAGGTTGTAGTTAG 59.003 47.826 0.00 0.00 0.00 2.34
328 329 2.742589 GCCTGTGAAGGTTGTAGTTAGC 59.257 50.000 0.00 0.00 0.00 3.09
329 330 2.993899 CCTGTGAAGGTTGTAGTTAGCG 59.006 50.000 0.00 0.00 0.00 4.26
330 331 3.554337 CCTGTGAAGGTTGTAGTTAGCGT 60.554 47.826 0.00 0.00 0.00 5.07
331 332 4.056050 CTGTGAAGGTTGTAGTTAGCGTT 58.944 43.478 0.00 0.00 0.00 4.84
332 333 4.444536 TGTGAAGGTTGTAGTTAGCGTTT 58.555 39.130 0.00 0.00 0.00 3.60
333 334 4.508861 TGTGAAGGTTGTAGTTAGCGTTTC 59.491 41.667 0.00 0.00 0.00 2.78
334 335 4.508861 GTGAAGGTTGTAGTTAGCGTTTCA 59.491 41.667 0.00 0.00 0.00 2.69
335 336 4.748102 TGAAGGTTGTAGTTAGCGTTTCAG 59.252 41.667 0.00 0.00 0.00 3.02
336 337 4.332428 AGGTTGTAGTTAGCGTTTCAGT 57.668 40.909 0.00 0.00 0.00 3.41
337 338 4.304939 AGGTTGTAGTTAGCGTTTCAGTC 58.695 43.478 0.00 0.00 0.00 3.51
338 339 3.431233 GGTTGTAGTTAGCGTTTCAGTCC 59.569 47.826 0.00 0.00 0.00 3.85
339 340 4.053295 GTTGTAGTTAGCGTTTCAGTCCA 58.947 43.478 0.00 0.00 0.00 4.02
340 341 3.909430 TGTAGTTAGCGTTTCAGTCCAG 58.091 45.455 0.00 0.00 0.00 3.86
341 342 3.319972 TGTAGTTAGCGTTTCAGTCCAGT 59.680 43.478 0.00 0.00 0.00 4.00
342 343 2.755650 AGTTAGCGTTTCAGTCCAGTG 58.244 47.619 0.00 0.00 0.00 3.66
343 344 2.102588 AGTTAGCGTTTCAGTCCAGTGT 59.897 45.455 0.00 0.00 0.00 3.55
344 345 2.870411 GTTAGCGTTTCAGTCCAGTGTT 59.130 45.455 0.00 0.00 0.00 3.32
345 346 1.583054 AGCGTTTCAGTCCAGTGTTC 58.417 50.000 0.00 0.00 0.00 3.18
346 347 0.586802 GCGTTTCAGTCCAGTGTTCC 59.413 55.000 0.00 0.00 0.00 3.62
347 348 1.226746 CGTTTCAGTCCAGTGTTCCC 58.773 55.000 0.00 0.00 0.00 3.97
348 349 1.605753 GTTTCAGTCCAGTGTTCCCC 58.394 55.000 0.00 0.00 0.00 4.81
349 350 1.133915 GTTTCAGTCCAGTGTTCCCCA 60.134 52.381 0.00 0.00 0.00 4.96
350 351 1.444933 TTCAGTCCAGTGTTCCCCAT 58.555 50.000 0.00 0.00 0.00 4.00
351 352 1.444933 TCAGTCCAGTGTTCCCCATT 58.555 50.000 0.00 0.00 0.00 3.16
352 353 1.073763 TCAGTCCAGTGTTCCCCATTG 59.926 52.381 0.00 0.00 0.00 2.82
353 354 1.149101 AGTCCAGTGTTCCCCATTGT 58.851 50.000 0.00 0.00 0.00 2.71
354 355 2.039746 CAGTCCAGTGTTCCCCATTGTA 59.960 50.000 0.00 0.00 0.00 2.41
355 356 2.919602 AGTCCAGTGTTCCCCATTGTAT 59.080 45.455 0.00 0.00 0.00 2.29
356 357 3.054361 AGTCCAGTGTTCCCCATTGTATC 60.054 47.826 0.00 0.00 0.00 2.24
357 358 2.093181 TCCAGTGTTCCCCATTGTATCG 60.093 50.000 0.00 0.00 0.00 2.92
358 359 2.355716 CCAGTGTTCCCCATTGTATCGT 60.356 50.000 0.00 0.00 0.00 3.73
359 360 3.343617 CAGTGTTCCCCATTGTATCGTT 58.656 45.455 0.00 0.00 0.00 3.85
360 361 3.374058 CAGTGTTCCCCATTGTATCGTTC 59.626 47.826 0.00 0.00 0.00 3.95
361 362 3.263425 AGTGTTCCCCATTGTATCGTTCT 59.737 43.478 0.00 0.00 0.00 3.01
362 363 3.374058 GTGTTCCCCATTGTATCGTTCTG 59.626 47.826 0.00 0.00 0.00 3.02
363 364 2.943033 GTTCCCCATTGTATCGTTCTGG 59.057 50.000 0.00 0.00 0.00 3.86
364 365 1.134220 TCCCCATTGTATCGTTCTGGC 60.134 52.381 0.00 0.00 0.00 4.85
365 366 1.308998 CCCATTGTATCGTTCTGGCC 58.691 55.000 0.00 0.00 0.00 5.36
366 367 0.937304 CCATTGTATCGTTCTGGCCG 59.063 55.000 0.00 0.00 0.00 6.13
367 368 1.651987 CATTGTATCGTTCTGGCCGT 58.348 50.000 0.00 0.00 0.00 5.68
368 369 2.006888 CATTGTATCGTTCTGGCCGTT 58.993 47.619 0.00 0.00 0.00 4.44
369 370 1.434555 TTGTATCGTTCTGGCCGTTG 58.565 50.000 0.00 0.00 0.00 4.10
370 371 0.319083 TGTATCGTTCTGGCCGTTGT 59.681 50.000 0.00 0.00 0.00 3.32
371 372 1.545136 TGTATCGTTCTGGCCGTTGTA 59.455 47.619 0.00 0.00 0.00 2.41
372 373 2.029200 TGTATCGTTCTGGCCGTTGTAA 60.029 45.455 0.00 0.00 0.00 2.41
373 374 2.396590 ATCGTTCTGGCCGTTGTAAT 57.603 45.000 0.00 0.00 0.00 1.89
374 375 2.172851 TCGTTCTGGCCGTTGTAATT 57.827 45.000 0.00 0.00 0.00 1.40
375 376 2.496111 TCGTTCTGGCCGTTGTAATTT 58.504 42.857 0.00 0.00 0.00 1.82
376 377 2.224549 TCGTTCTGGCCGTTGTAATTTG 59.775 45.455 0.00 0.00 0.00 2.32
377 378 2.667171 CGTTCTGGCCGTTGTAATTTGG 60.667 50.000 0.00 0.00 0.00 3.28
378 379 2.279935 TCTGGCCGTTGTAATTTGGT 57.720 45.000 0.00 0.00 0.00 3.67
379 380 2.588620 TCTGGCCGTTGTAATTTGGTT 58.411 42.857 0.00 0.00 0.00 3.67
380 381 2.294791 TCTGGCCGTTGTAATTTGGTTG 59.705 45.455 0.00 0.00 0.00 3.77
381 382 2.032620 TGGCCGTTGTAATTTGGTTGT 58.967 42.857 0.00 0.00 0.00 3.32
382 383 2.431057 TGGCCGTTGTAATTTGGTTGTT 59.569 40.909 0.00 0.00 0.00 2.83
383 384 3.118738 TGGCCGTTGTAATTTGGTTGTTT 60.119 39.130 0.00 0.00 0.00 2.83
384 385 3.246463 GGCCGTTGTAATTTGGTTGTTTG 59.754 43.478 0.00 0.00 0.00 2.93
385 386 3.866327 GCCGTTGTAATTTGGTTGTTTGT 59.134 39.130 0.00 0.00 0.00 2.83
386 387 4.330347 GCCGTTGTAATTTGGTTGTTTGTT 59.670 37.500 0.00 0.00 0.00 2.83
387 388 5.725316 GCCGTTGTAATTTGGTTGTTTGTTG 60.725 40.000 0.00 0.00 0.00 3.33
388 389 5.348997 CCGTTGTAATTTGGTTGTTTGTTGT 59.651 36.000 0.00 0.00 0.00 3.32
389 390 6.530534 CCGTTGTAATTTGGTTGTTTGTTGTA 59.469 34.615 0.00 0.00 0.00 2.41
390 391 7.063074 CCGTTGTAATTTGGTTGTTTGTTGTAA 59.937 33.333 0.00 0.00 0.00 2.41
391 392 7.893741 CGTTGTAATTTGGTTGTTTGTTGTAAC 59.106 33.333 0.00 0.00 0.00 2.50
392 393 8.927721 GTTGTAATTTGGTTGTTTGTTGTAACT 58.072 29.630 0.00 0.00 0.00 2.24
393 394 8.690680 TGTAATTTGGTTGTTTGTTGTAACTC 57.309 30.769 0.00 0.00 0.00 3.01
394 395 7.760340 TGTAATTTGGTTGTTTGTTGTAACTCC 59.240 33.333 0.00 0.00 0.00 3.85
395 396 5.986501 TTTGGTTGTTTGTTGTAACTCCT 57.013 34.783 0.00 0.00 0.00 3.69
396 397 4.974368 TGGTTGTTTGTTGTAACTCCTG 57.026 40.909 0.00 0.00 0.00 3.86
397 398 4.590918 TGGTTGTTTGTTGTAACTCCTGA 58.409 39.130 0.00 0.00 0.00 3.86
398 399 4.396790 TGGTTGTTTGTTGTAACTCCTGAC 59.603 41.667 0.00 0.00 0.00 3.51
399 400 4.201980 GGTTGTTTGTTGTAACTCCTGACC 60.202 45.833 0.00 0.00 0.00 4.02
400 401 3.199677 TGTTTGTTGTAACTCCTGACCG 58.800 45.455 0.00 0.00 0.00 4.79
401 402 2.536761 TTGTTGTAACTCCTGACCGG 57.463 50.000 0.00 0.00 0.00 5.28
402 403 1.416243 TGTTGTAACTCCTGACCGGT 58.584 50.000 6.92 6.92 0.00 5.28
403 404 1.764134 TGTTGTAACTCCTGACCGGTT 59.236 47.619 9.42 0.00 0.00 4.44
404 405 2.140717 GTTGTAACTCCTGACCGGTTG 58.859 52.381 9.42 4.87 0.00 3.77
405 406 1.707106 TGTAACTCCTGACCGGTTGA 58.293 50.000 9.42 5.31 0.00 3.18
406 407 2.253610 TGTAACTCCTGACCGGTTGAT 58.746 47.619 9.42 0.00 0.00 2.57
407 408 3.433343 TGTAACTCCTGACCGGTTGATA 58.567 45.455 9.42 0.00 0.00 2.15
408 409 3.446161 TGTAACTCCTGACCGGTTGATAG 59.554 47.826 9.42 7.50 0.00 2.08
409 410 0.824759 ACTCCTGACCGGTTGATAGC 59.175 55.000 9.42 0.00 0.00 2.97
410 411 0.105039 CTCCTGACCGGTTGATAGCC 59.895 60.000 9.42 0.00 0.00 3.93
416 417 2.280186 CGGTTGATAGCCGGGCTC 60.280 66.667 27.65 13.41 44.98 4.70
417 418 2.797278 CGGTTGATAGCCGGGCTCT 61.797 63.158 27.65 17.00 44.98 4.09
418 419 1.527370 GGTTGATAGCCGGGCTCTT 59.473 57.895 27.65 14.83 40.44 2.85
419 420 0.533085 GGTTGATAGCCGGGCTCTTC 60.533 60.000 27.65 22.74 40.44 2.87
420 421 0.876342 GTTGATAGCCGGGCTCTTCG 60.876 60.000 27.65 0.00 40.44 3.79
421 422 1.327690 TTGATAGCCGGGCTCTTCGT 61.328 55.000 27.65 7.66 40.44 3.85
422 423 1.300233 GATAGCCGGGCTCTTCGTG 60.300 63.158 27.65 0.00 40.44 4.35
423 424 1.735376 GATAGCCGGGCTCTTCGTGA 61.735 60.000 27.65 6.29 40.44 4.35
424 425 1.739338 ATAGCCGGGCTCTTCGTGAG 61.739 60.000 27.65 4.32 45.33 3.51
432 433 3.498676 CTCTTCGTGAGCCTTCGTT 57.501 52.632 0.00 0.00 35.84 3.85
433 434 1.341606 CTCTTCGTGAGCCTTCGTTC 58.658 55.000 0.00 0.00 35.84 3.95
434 435 0.959553 TCTTCGTGAGCCTTCGTTCT 59.040 50.000 0.00 0.00 0.00 3.01
435 436 2.156917 TCTTCGTGAGCCTTCGTTCTA 58.843 47.619 0.00 0.00 0.00 2.10
436 437 2.555325 TCTTCGTGAGCCTTCGTTCTAA 59.445 45.455 0.00 0.00 0.00 2.10
437 438 3.005050 TCTTCGTGAGCCTTCGTTCTAAA 59.995 43.478 0.00 0.00 0.00 1.85
438 439 3.374220 TCGTGAGCCTTCGTTCTAAAA 57.626 42.857 0.00 0.00 0.00 1.52
454 455 9.754382 TCGTTCTAAAAAGTCTACACTATGTTT 57.246 29.630 0.00 0.00 30.14 2.83
481 482 1.536072 GCATTACCGACGATCTCAGCA 60.536 52.381 0.00 0.00 0.00 4.41
611 615 2.483714 GCTGACCCGTACATGATCACAT 60.484 50.000 0.00 0.00 37.19 3.21
716 764 5.642063 ACAAACAATATACTCGTCCAACCAG 59.358 40.000 0.00 0.00 0.00 4.00
753 866 4.545706 CGTCATCACTTGCGTTATTCGTAC 60.546 45.833 0.00 0.00 42.13 3.67
787 938 1.673665 CACTGTCAAGCCTCCTGCC 60.674 63.158 0.00 0.00 42.71 4.85
788 939 1.845205 ACTGTCAAGCCTCCTGCCT 60.845 57.895 0.00 0.00 42.71 4.75
794 945 0.106819 CAAGCCTCCTGCCTGCTAAT 60.107 55.000 0.00 0.00 42.71 1.73
795 946 1.141657 CAAGCCTCCTGCCTGCTAATA 59.858 52.381 0.00 0.00 42.71 0.98
796 947 0.761802 AGCCTCCTGCCTGCTAATAC 59.238 55.000 0.00 0.00 42.71 1.89
817 968 4.288670 CTGATACAAAATGGAGCAGCAG 57.711 45.455 0.00 0.00 37.96 4.24
897 1068 0.623723 GATCCCCAGCCAACCAAGTA 59.376 55.000 0.00 0.00 0.00 2.24
905 1076 0.594602 GCCAACCAAGTACCGAAACC 59.405 55.000 0.00 0.00 0.00 3.27
975 1175 2.915659 TCGAAGCACACGGAGGGT 60.916 61.111 0.00 0.00 0.00 4.34
996 1197 5.482908 GGTAAGAAGAAGTCATCTGCAGAA 58.517 41.667 22.50 1.31 38.79 3.02
1303 1515 2.997315 CCACGGAGACCTGCCTGA 60.997 66.667 0.00 0.00 0.00 3.86
1554 1783 5.462398 ACGTGCTGTTTTTGTTTTGTTGTTA 59.538 32.000 0.00 0.00 0.00 2.41
1555 1784 6.146347 ACGTGCTGTTTTTGTTTTGTTGTTAT 59.854 30.769 0.00 0.00 0.00 1.89
1624 1884 5.807520 TGTTGATCGAAGCTCTTATCTGAAC 59.192 40.000 0.00 0.00 0.00 3.18
1631 1891 4.792521 AGCTCTTATCTGAACGTCTGTT 57.207 40.909 0.00 0.00 42.23 3.16
1934 2198 4.521062 GCTGGCGCACGAGGAGAT 62.521 66.667 10.83 0.00 35.78 2.75
2064 2328 3.014623 CAGCATCACTGTCATGACCAAT 58.985 45.455 22.85 8.24 41.86 3.16
2082 2346 0.322816 ATGCGCAGATGGTGGAGTTT 60.323 50.000 18.32 0.00 0.00 2.66
2142 2406 2.753043 GTCCGCCGAGACCTGGTA 60.753 66.667 0.00 0.00 0.00 3.25
2334 2598 0.036732 TGATCAGCTGGCCGTTCTTT 59.963 50.000 15.13 0.00 0.00 2.52
2435 2699 4.303853 CGTCGCCGGACTTATCAG 57.696 61.111 5.05 0.00 41.16 2.90
2460 2724 1.228510 CATGGAAGGGGAGAAGGGC 59.771 63.158 0.00 0.00 0.00 5.19
2481 2745 1.863325 AGAGCATGAGGAAGAGAGCA 58.137 50.000 0.00 0.00 0.00 4.26
2485 2749 1.755959 GCATGAGGAAGAGAGCAGAGA 59.244 52.381 0.00 0.00 0.00 3.10
2537 2801 4.351938 CGGCGGTTCGTCTCACCA 62.352 66.667 0.00 0.00 33.36 4.17
2548 2812 2.159212 TCGTCTCACCAAAACTTCGACA 60.159 45.455 0.00 0.00 0.00 4.35
2577 2841 2.281484 GACGTGCTCCTGCCCAAA 60.281 61.111 0.00 0.00 38.71 3.28
2661 2943 7.221838 TGCTTGTTAAGAAAATTCGTTCCTTTG 59.778 33.333 0.00 0.00 0.00 2.77
2664 2946 7.197703 TGTTAAGAAAATTCGTTCCTTTGGAC 58.802 34.615 0.00 0.00 0.00 4.02
2694 2976 0.741221 GCCCTGAGCGGAGTAACAAG 60.741 60.000 0.00 0.00 33.16 3.16
2712 2995 4.839121 ACAAGAATGCTAAACATACGGGA 58.161 39.130 0.00 0.00 38.34 5.14
2745 3028 1.487976 AGTGCTGATGTAGACCATGGG 59.512 52.381 18.09 0.00 32.56 4.00
2767 3050 9.657419 ATGGGAAATTTTACTTCATGATGAAAC 57.343 29.630 15.03 1.45 35.73 2.78
2769 3052 9.657419 GGGAAATTTTACTTCATGATGAAACAT 57.343 29.630 15.03 0.93 35.73 2.71
2786 3069 8.978874 ATGAAACATGATGGCAATTACTACTA 57.021 30.769 0.00 0.00 0.00 1.82
2825 3108 4.846779 TTTTTGTGTTCTACCAGATGGC 57.153 40.909 0.00 0.00 39.32 4.40
2916 3199 4.519540 ATTTTTGCCACCATGTACAGAC 57.480 40.909 0.33 0.00 0.00 3.51
2983 3434 8.558973 TTTGAATAATGGCCTTTTAAATGTGG 57.441 30.769 9.46 0.00 0.00 4.17
2997 3448 9.981114 CTTTTAAATGTGGGAGAACAACTATTT 57.019 29.630 0.00 0.00 32.81 1.40
3067 3518 9.512435 CATTTTACCATGCTCTAGAGAAAATTG 57.488 33.333 24.24 8.35 0.00 2.32
3074 3525 8.149647 CCATGCTCTAGAGAAAATTGTCTATCT 58.850 37.037 24.24 0.00 33.30 1.98
3140 3591 0.108186 TGACATGGATGGACGTCTGC 60.108 55.000 16.46 2.08 0.00 4.26
3173 3624 3.517901 TGAGATCTTAAACCCGACCACAT 59.482 43.478 0.00 0.00 0.00 3.21
3179 3630 1.645710 AAACCCGACCACATCTCTCT 58.354 50.000 0.00 0.00 0.00 3.10
3198 3649 3.068691 CTCGCCACCCTTCTCCGA 61.069 66.667 0.00 0.00 0.00 4.55
3243 3694 1.006832 GTCACAACACAGTTGACGCT 58.993 50.000 15.99 0.00 0.00 5.07
3245 3696 2.034001 GTCACAACACAGTTGACGCTAC 60.034 50.000 15.99 3.83 0.00 3.58
3250 3701 1.070134 ACACAGTTGACGCTACCATGT 59.930 47.619 0.00 0.00 0.00 3.21
3251 3702 2.143122 CACAGTTGACGCTACCATGTT 58.857 47.619 0.00 0.00 0.00 2.71
3265 3760 5.760253 GCTACCATGTTATCACATAGCAACT 59.240 40.000 7.94 0.00 42.14 3.16
3269 3764 5.585844 CCATGTTATCACATAGCAACTCACA 59.414 40.000 0.00 0.00 42.14 3.58
3301 3796 6.122964 AGCTGGTTAATAAGAATGGAGAACC 58.877 40.000 0.00 0.00 36.28 3.62
3355 3850 9.907576 GCTCGCACATCTATTATTATTGTATTC 57.092 33.333 0.00 0.00 0.00 1.75
3384 3879 2.063266 TGGTAAAGTTGCTCTTACGCG 58.937 47.619 3.53 3.53 35.02 6.01
3390 3885 1.067212 AGTTGCTCTTACGCGGGATAG 59.933 52.381 12.47 3.54 0.00 2.08
3425 3920 1.560860 GACTGCTGCCGTCTCACAAC 61.561 60.000 15.70 0.00 0.00 3.32
3426 3921 2.661537 TGCTGCCGTCTCACAACG 60.662 61.111 0.00 0.00 42.24 4.10
3434 3929 0.243907 CGTCTCACAACGGGTCTCAT 59.756 55.000 0.00 0.00 38.96 2.90
3439 3934 1.375523 ACAACGGGTCTCATTCGGC 60.376 57.895 0.00 0.00 0.00 5.54
3490 3985 8.842358 ATCTTTGTAAGTGATTTCCGAAAGTA 57.158 30.769 0.00 0.00 0.00 2.24
3499 3994 8.842358 AGTGATTTCCGAAAGTACAAAATAGA 57.158 30.769 10.95 0.00 0.00 1.98
3502 3997 9.226606 TGATTTCCGAAAGTACAAAATAGATGT 57.773 29.630 0.00 0.00 34.81 3.06
3507 4002 7.876068 TCCGAAAGTACAAAATAGATGTTCAGT 59.124 33.333 0.00 0.00 32.27 3.41
3508 4003 7.957484 CCGAAAGTACAAAATAGATGTTCAGTG 59.043 37.037 0.00 0.00 32.27 3.66
3536 4031 6.690194 ATCTGATGTCAAACCTGAAATAGC 57.310 37.500 0.00 0.00 28.87 2.97
3540 4035 4.439305 TGTCAAACCTGAAATAGCATGC 57.561 40.909 10.51 10.51 31.88 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.002797 GCCACTTCGATTTGGGCT 57.997 55.556 13.29 0.00 41.39 5.19
5 6 1.154225 GTGCGGCCACTTCGATTTG 60.154 57.895 2.24 0.00 38.93 2.32
6 7 3.263941 GTGCGGCCACTTCGATTT 58.736 55.556 2.24 0.00 38.93 2.17
14 15 2.106683 GTGGACATAGTGCGGCCAC 61.107 63.158 2.24 0.00 41.77 5.01
15 16 2.267642 GTGGACATAGTGCGGCCA 59.732 61.111 2.24 0.00 0.00 5.36
16 17 2.513897 GGTGGACATAGTGCGGCC 60.514 66.667 0.00 0.00 0.00 6.13
17 18 0.676782 AAAGGTGGACATAGTGCGGC 60.677 55.000 0.00 0.00 0.00 6.53
18 19 1.369625 GAAAGGTGGACATAGTGCGG 58.630 55.000 0.00 0.00 0.00 5.69
19 20 0.999406 CGAAAGGTGGACATAGTGCG 59.001 55.000 0.00 0.00 0.00 5.34
20 21 2.380084 TCGAAAGGTGGACATAGTGC 57.620 50.000 0.00 0.00 0.00 4.40
31 32 1.079127 CGCCCTCACATCGAAAGGT 60.079 57.895 0.00 0.00 0.00 3.50
32 33 1.084370 GTCGCCCTCACATCGAAAGG 61.084 60.000 0.00 0.00 33.81 3.11
33 34 0.389817 TGTCGCCCTCACATCGAAAG 60.390 55.000 0.00 0.00 33.81 2.62
34 35 0.249120 ATGTCGCCCTCACATCGAAA 59.751 50.000 0.00 0.00 33.81 3.46
35 36 0.249120 AATGTCGCCCTCACATCGAA 59.751 50.000 0.00 0.00 33.12 3.71
36 37 0.179111 GAATGTCGCCCTCACATCGA 60.179 55.000 0.00 0.00 33.12 3.59
37 38 0.179100 AGAATGTCGCCCTCACATCG 60.179 55.000 0.00 0.00 33.12 3.84
38 39 1.936547 GAAGAATGTCGCCCTCACATC 59.063 52.381 0.00 0.00 33.12 3.06
39 40 1.556911 AGAAGAATGTCGCCCTCACAT 59.443 47.619 0.00 0.00 35.94 3.21
40 41 0.976641 AGAAGAATGTCGCCCTCACA 59.023 50.000 0.00 0.00 0.00 3.58
41 42 2.815478 CTAGAAGAATGTCGCCCTCAC 58.185 52.381 0.00 0.00 0.00 3.51
42 43 1.137086 GCTAGAAGAATGTCGCCCTCA 59.863 52.381 0.00 0.00 0.00 3.86
43 44 1.410882 AGCTAGAAGAATGTCGCCCTC 59.589 52.381 0.00 0.00 0.00 4.30
44 45 1.410882 GAGCTAGAAGAATGTCGCCCT 59.589 52.381 0.00 0.00 0.00 5.19
45 46 1.410882 AGAGCTAGAAGAATGTCGCCC 59.589 52.381 0.00 0.00 0.00 6.13
46 47 2.880963 AGAGCTAGAAGAATGTCGCC 57.119 50.000 0.00 0.00 0.00 5.54
47 48 4.274950 ACTCTAGAGCTAGAAGAATGTCGC 59.725 45.833 19.97 0.00 41.22 5.19
48 49 5.525745 TCACTCTAGAGCTAGAAGAATGTCG 59.474 44.000 19.97 0.00 41.22 4.35
49 50 6.935741 TCACTCTAGAGCTAGAAGAATGTC 57.064 41.667 19.97 0.00 41.22 3.06
50 51 6.942532 CTCACTCTAGAGCTAGAAGAATGT 57.057 41.667 19.97 0.72 41.22 2.71
62 63 4.955925 TTTCGAGAAGCTCACTCTAGAG 57.044 45.455 18.49 18.49 38.68 2.43
63 64 4.336993 GGATTTCGAGAAGCTCACTCTAGA 59.663 45.833 15.53 6.09 32.87 2.43
64 65 4.499019 GGGATTTCGAGAAGCTCACTCTAG 60.499 50.000 15.53 4.06 32.87 2.43
65 66 3.381908 GGGATTTCGAGAAGCTCACTCTA 59.618 47.826 15.53 5.50 32.87 2.43
66 67 2.167487 GGGATTTCGAGAAGCTCACTCT 59.833 50.000 15.53 3.06 32.87 3.24
67 68 2.545731 GGGATTTCGAGAAGCTCACTC 58.454 52.381 9.85 9.85 0.00 3.51
68 69 1.134965 CGGGATTTCGAGAAGCTCACT 60.135 52.381 0.00 0.00 0.00 3.41
69 70 1.135083 TCGGGATTTCGAGAAGCTCAC 60.135 52.381 0.00 0.00 34.82 3.51
70 71 1.135083 GTCGGGATTTCGAGAAGCTCA 60.135 52.381 0.00 0.00 40.01 4.26
71 72 1.562017 GTCGGGATTTCGAGAAGCTC 58.438 55.000 0.00 0.00 40.01 4.09
72 73 0.179134 CGTCGGGATTTCGAGAAGCT 60.179 55.000 0.00 0.00 40.01 3.74
73 74 1.146358 CCGTCGGGATTTCGAGAAGC 61.146 60.000 2.34 0.00 40.01 3.86
74 75 0.172803 ACCGTCGGGATTTCGAGAAG 59.827 55.000 17.28 0.00 40.01 2.85
75 76 0.108992 CACCGTCGGGATTTCGAGAA 60.109 55.000 17.28 0.00 40.01 2.87
76 77 1.509463 CACCGTCGGGATTTCGAGA 59.491 57.895 17.28 0.00 40.01 4.04
77 78 2.165301 GCACCGTCGGGATTTCGAG 61.165 63.158 17.28 0.00 40.01 4.04
78 79 2.125832 GCACCGTCGGGATTTCGA 60.126 61.111 17.28 0.00 36.97 3.71
79 80 3.550992 CGCACCGTCGGGATTTCG 61.551 66.667 17.28 7.31 36.97 3.46
80 81 3.192922 CCGCACCGTCGGGATTTC 61.193 66.667 17.28 0.00 45.38 2.17
99 100 4.221422 TCGCCATGGCTCGTAGGC 62.221 66.667 33.07 5.71 43.61 3.93
100 101 2.028190 CTCGCCATGGCTCGTAGG 59.972 66.667 33.07 17.27 39.32 3.18
101 102 2.028190 CCTCGCCATGGCTCGTAG 59.972 66.667 33.07 22.68 39.32 3.51
102 103 3.536917 CCCTCGCCATGGCTCGTA 61.537 66.667 33.07 15.31 39.32 3.43
106 107 4.815973 TACCCCCTCGCCATGGCT 62.816 66.667 33.07 15.97 39.32 4.75
107 108 4.256180 CTACCCCCTCGCCATGGC 62.256 72.222 27.67 27.67 37.85 4.40
108 109 3.560251 CCTACCCCCTCGCCATGG 61.560 72.222 7.63 7.63 0.00 3.66
109 110 3.560251 CCCTACCCCCTCGCCATG 61.560 72.222 0.00 0.00 0.00 3.66
110 111 4.103928 ACCCTACCCCCTCGCCAT 62.104 66.667 0.00 0.00 0.00 4.40
111 112 4.791069 GACCCTACCCCCTCGCCA 62.791 72.222 0.00 0.00 0.00 5.69
120 121 1.001376 ACCGAAGAGGGACCCTACC 59.999 63.158 14.87 1.22 46.96 3.18
121 122 0.324091 TCACCGAAGAGGGACCCTAC 60.324 60.000 14.87 7.47 46.96 3.18
122 123 0.635009 ATCACCGAAGAGGGACCCTA 59.365 55.000 14.87 0.00 46.96 3.53
123 124 0.635009 TATCACCGAAGAGGGACCCT 59.365 55.000 14.79 14.79 46.96 4.34
124 125 1.041437 CTATCACCGAAGAGGGACCC 58.959 60.000 0.59 0.59 46.96 4.46
125 126 1.957877 CTCTATCACCGAAGAGGGACC 59.042 57.143 0.00 0.00 46.96 4.46
126 127 2.933573 TCTCTATCACCGAAGAGGGAC 58.066 52.381 0.00 0.00 46.96 4.46
127 128 3.491342 CATCTCTATCACCGAAGAGGGA 58.509 50.000 0.00 0.00 46.96 4.20
128 129 2.560542 CCATCTCTATCACCGAAGAGGG 59.439 54.545 0.00 0.00 46.96 4.30
130 131 4.824537 TCTTCCATCTCTATCACCGAAGAG 59.175 45.833 0.00 0.00 40.54 2.85
131 132 4.793201 TCTTCCATCTCTATCACCGAAGA 58.207 43.478 0.00 0.00 33.67 2.87
132 133 5.010516 ACATCTTCCATCTCTATCACCGAAG 59.989 44.000 0.00 0.00 0.00 3.79
133 134 4.895889 ACATCTTCCATCTCTATCACCGAA 59.104 41.667 0.00 0.00 0.00 4.30
134 135 4.474394 ACATCTTCCATCTCTATCACCGA 58.526 43.478 0.00 0.00 0.00 4.69
135 136 4.862902 ACATCTTCCATCTCTATCACCG 57.137 45.455 0.00 0.00 0.00 4.94
136 137 5.923204 ACAACATCTTCCATCTCTATCACC 58.077 41.667 0.00 0.00 0.00 4.02
137 138 6.481644 GGAACAACATCTTCCATCTCTATCAC 59.518 42.308 0.00 0.00 37.68 3.06
138 139 6.408548 GGGAACAACATCTTCCATCTCTATCA 60.409 42.308 0.00 0.00 39.29 2.15
139 140 5.994668 GGGAACAACATCTTCCATCTCTATC 59.005 44.000 0.00 0.00 39.29 2.08
140 141 5.163152 GGGGAACAACATCTTCCATCTCTAT 60.163 44.000 0.00 0.00 39.29 1.98
141 142 4.164221 GGGGAACAACATCTTCCATCTCTA 59.836 45.833 0.00 0.00 39.29 2.43
142 143 3.054065 GGGGAACAACATCTTCCATCTCT 60.054 47.826 0.00 0.00 39.29 3.10
143 144 3.054065 AGGGGAACAACATCTTCCATCTC 60.054 47.826 0.00 0.00 39.29 2.75
144 145 2.922283 AGGGGAACAACATCTTCCATCT 59.078 45.455 0.00 0.00 39.29 2.90
145 146 3.372440 AGGGGAACAACATCTTCCATC 57.628 47.619 0.00 0.00 39.29 3.51
146 147 3.334881 AGAAGGGGAACAACATCTTCCAT 59.665 43.478 0.00 0.00 39.29 3.41
147 148 2.716424 AGAAGGGGAACAACATCTTCCA 59.284 45.455 0.00 0.00 39.29 3.53
148 149 3.441500 AGAAGGGGAACAACATCTTCC 57.558 47.619 0.00 0.00 37.10 3.46
149 150 4.657013 AGAAGAAGGGGAACAACATCTTC 58.343 43.478 5.43 5.43 41.79 2.87
150 151 4.352298 AGAGAAGAAGGGGAACAACATCTT 59.648 41.667 0.00 0.00 0.00 2.40
151 152 3.913163 AGAGAAGAAGGGGAACAACATCT 59.087 43.478 0.00 0.00 0.00 2.90
152 153 4.293662 AGAGAAGAAGGGGAACAACATC 57.706 45.455 0.00 0.00 0.00 3.06
153 154 4.226168 CCTAGAGAAGAAGGGGAACAACAT 59.774 45.833 0.00 0.00 0.00 2.71
154 155 3.583086 CCTAGAGAAGAAGGGGAACAACA 59.417 47.826 0.00 0.00 0.00 3.33
155 156 3.583526 ACCTAGAGAAGAAGGGGAACAAC 59.416 47.826 0.00 0.00 37.18 3.32
156 157 3.583086 CACCTAGAGAAGAAGGGGAACAA 59.417 47.826 0.00 0.00 38.70 2.83
157 158 3.173965 CACCTAGAGAAGAAGGGGAACA 58.826 50.000 0.00 0.00 38.70 3.18
158 159 3.174779 ACACCTAGAGAAGAAGGGGAAC 58.825 50.000 0.00 0.00 38.70 3.62
159 160 3.562108 ACACCTAGAGAAGAAGGGGAA 57.438 47.619 0.00 0.00 38.70 3.97
160 161 3.442076 GAACACCTAGAGAAGAAGGGGA 58.558 50.000 0.00 0.00 38.70 4.81
161 162 2.502130 GGAACACCTAGAGAAGAAGGGG 59.498 54.545 0.00 0.00 42.41 4.79
162 163 3.196685 CAGGAACACCTAGAGAAGAAGGG 59.803 52.174 0.00 0.00 37.18 3.95
163 164 3.196685 CCAGGAACACCTAGAGAAGAAGG 59.803 52.174 0.00 0.00 38.93 3.46
164 165 4.090090 TCCAGGAACACCTAGAGAAGAAG 58.910 47.826 0.00 0.00 32.14 2.85
165 166 4.090090 CTCCAGGAACACCTAGAGAAGAA 58.910 47.826 5.97 0.00 40.34 2.52
166 167 3.702792 CTCCAGGAACACCTAGAGAAGA 58.297 50.000 5.97 0.00 40.34 2.87
167 168 2.167487 GCTCCAGGAACACCTAGAGAAG 59.833 54.545 13.95 0.00 40.34 2.85
168 169 2.180276 GCTCCAGGAACACCTAGAGAA 58.820 52.381 13.95 0.00 40.34 2.87
169 170 1.077169 TGCTCCAGGAACACCTAGAGA 59.923 52.381 13.95 0.81 40.34 3.10
170 171 1.561643 TGCTCCAGGAACACCTAGAG 58.438 55.000 7.21 7.21 40.67 2.43
171 172 1.833630 CATGCTCCAGGAACACCTAGA 59.166 52.381 0.00 0.00 32.14 2.43
172 173 1.134280 CCATGCTCCAGGAACACCTAG 60.134 57.143 0.00 0.00 32.14 3.02
173 174 0.911769 CCATGCTCCAGGAACACCTA 59.088 55.000 0.00 0.00 32.14 3.08
174 175 1.687612 CCATGCTCCAGGAACACCT 59.312 57.895 0.00 0.00 33.85 4.00
175 176 2.048603 GCCATGCTCCAGGAACACC 61.049 63.158 0.00 0.00 0.00 4.16
176 177 2.048603 GGCCATGCTCCAGGAACAC 61.049 63.158 0.00 0.00 0.00 3.32
177 178 1.866483 ATGGCCATGCTCCAGGAACA 61.866 55.000 20.04 0.00 36.98 3.18
178 179 1.076485 ATGGCCATGCTCCAGGAAC 60.076 57.895 20.04 0.00 36.98 3.62
179 180 1.228228 GATGGCCATGCTCCAGGAA 59.772 57.895 26.56 0.00 36.98 3.36
180 181 1.284111 AAGATGGCCATGCTCCAGGA 61.284 55.000 26.56 0.00 36.98 3.86
181 182 0.822532 GAAGATGGCCATGCTCCAGG 60.823 60.000 26.56 0.00 36.98 4.45
182 183 1.164662 CGAAGATGGCCATGCTCCAG 61.165 60.000 26.56 10.63 36.98 3.86
183 184 1.153107 CGAAGATGGCCATGCTCCA 60.153 57.895 26.56 7.28 38.09 3.86
184 185 0.464373 TTCGAAGATGGCCATGCTCC 60.464 55.000 26.56 8.75 35.04 4.70
185 186 1.332997 CTTTCGAAGATGGCCATGCTC 59.667 52.381 26.56 17.67 35.04 4.26
186 187 1.340405 ACTTTCGAAGATGGCCATGCT 60.340 47.619 26.56 16.99 35.04 3.79
187 188 1.064654 GACTTTCGAAGATGGCCATGC 59.935 52.381 26.56 14.84 35.04 4.06
188 189 1.328680 CGACTTTCGAAGATGGCCATG 59.671 52.381 26.56 8.97 43.74 3.66
189 190 1.656652 CGACTTTCGAAGATGGCCAT 58.343 50.000 20.96 20.96 43.74 4.40
190 191 0.391130 CCGACTTTCGAAGATGGCCA 60.391 55.000 8.56 8.56 43.74 5.36
191 192 1.706287 GCCGACTTTCGAAGATGGCC 61.706 60.000 17.09 0.00 43.74 5.36
192 193 0.741221 AGCCGACTTTCGAAGATGGC 60.741 55.000 19.12 19.12 43.74 4.40
193 194 2.579207 TAGCCGACTTTCGAAGATGG 57.421 50.000 0.00 0.71 43.74 3.51
194 195 3.448686 ACATAGCCGACTTTCGAAGATG 58.551 45.455 0.00 0.00 43.74 2.90
195 196 3.491104 GGACATAGCCGACTTTCGAAGAT 60.491 47.826 0.00 0.00 43.74 2.40
196 197 2.159282 GGACATAGCCGACTTTCGAAGA 60.159 50.000 0.00 0.00 43.74 2.87
197 198 2.159226 AGGACATAGCCGACTTTCGAAG 60.159 50.000 0.00 0.00 43.74 3.79
198 199 1.822990 AGGACATAGCCGACTTTCGAA 59.177 47.619 0.00 0.00 43.74 3.71
199 200 1.134367 CAGGACATAGCCGACTTTCGA 59.866 52.381 0.00 0.00 43.74 3.71
200 201 1.560923 CAGGACATAGCCGACTTTCG 58.439 55.000 0.00 0.00 40.07 3.46
201 202 1.134670 AGCAGGACATAGCCGACTTTC 60.135 52.381 0.00 0.00 0.00 2.62
202 203 0.905357 AGCAGGACATAGCCGACTTT 59.095 50.000 0.00 0.00 0.00 2.66
203 204 0.461961 GAGCAGGACATAGCCGACTT 59.538 55.000 0.00 0.00 0.00 3.01
204 205 0.396417 AGAGCAGGACATAGCCGACT 60.396 55.000 0.00 0.00 0.00 4.18
205 206 0.249238 CAGAGCAGGACATAGCCGAC 60.249 60.000 0.00 0.00 0.00 4.79
206 207 2.021068 GCAGAGCAGGACATAGCCGA 62.021 60.000 0.00 0.00 0.00 5.54
207 208 1.593750 GCAGAGCAGGACATAGCCG 60.594 63.158 0.00 0.00 0.00 5.52
208 209 0.532417 CAGCAGAGCAGGACATAGCC 60.532 60.000 0.00 0.00 0.00 3.93
209 210 1.159098 GCAGCAGAGCAGGACATAGC 61.159 60.000 0.00 0.00 0.00 2.97
210 211 0.464870 AGCAGCAGAGCAGGACATAG 59.535 55.000 0.00 0.00 36.85 2.23
211 212 0.463204 GAGCAGCAGAGCAGGACATA 59.537 55.000 0.00 0.00 36.85 2.29
212 213 1.221293 GAGCAGCAGAGCAGGACAT 59.779 57.895 0.00 0.00 36.85 3.06
213 214 0.613012 TAGAGCAGCAGAGCAGGACA 60.613 55.000 0.00 0.00 36.85 4.02
214 215 0.179113 GTAGAGCAGCAGAGCAGGAC 60.179 60.000 0.00 0.00 36.85 3.85
215 216 0.324183 AGTAGAGCAGCAGAGCAGGA 60.324 55.000 0.00 0.00 36.85 3.86
216 217 0.102844 GAGTAGAGCAGCAGAGCAGG 59.897 60.000 0.00 0.00 36.85 4.85
217 218 1.105457 AGAGTAGAGCAGCAGAGCAG 58.895 55.000 0.00 0.00 36.85 4.24
218 219 2.020720 GTAGAGTAGAGCAGCAGAGCA 58.979 52.381 0.00 0.00 36.85 4.26
219 220 2.297701 AGTAGAGTAGAGCAGCAGAGC 58.702 52.381 0.00 0.00 0.00 4.09
220 221 4.447290 TGTAGTAGAGTAGAGCAGCAGAG 58.553 47.826 0.00 0.00 0.00 3.35
221 222 4.489306 TGTAGTAGAGTAGAGCAGCAGA 57.511 45.455 0.00 0.00 0.00 4.26
222 223 6.652900 TCATATGTAGTAGAGTAGAGCAGCAG 59.347 42.308 1.90 0.00 0.00 4.24
223 224 6.534634 TCATATGTAGTAGAGTAGAGCAGCA 58.465 40.000 1.90 0.00 0.00 4.41
224 225 7.201696 GGATCATATGTAGTAGAGTAGAGCAGC 60.202 44.444 1.90 0.00 0.00 5.25
225 226 8.046708 AGGATCATATGTAGTAGAGTAGAGCAG 58.953 40.741 1.90 0.00 0.00 4.24
226 227 7.923461 AGGATCATATGTAGTAGAGTAGAGCA 58.077 38.462 1.90 0.00 0.00 4.26
227 228 9.542462 CTAGGATCATATGTAGTAGAGTAGAGC 57.458 40.741 1.90 0.00 0.00 4.09
231 232 9.945904 CACACTAGGATCATATGTAGTAGAGTA 57.054 37.037 1.90 0.00 0.00 2.59
232 233 7.885922 CCACACTAGGATCATATGTAGTAGAGT 59.114 40.741 1.90 2.87 0.00 3.24
233 234 8.103935 TCCACACTAGGATCATATGTAGTAGAG 58.896 40.741 1.90 2.33 31.23 2.43
234 235 7.985589 TCCACACTAGGATCATATGTAGTAGA 58.014 38.462 1.90 0.00 31.23 2.59
235 236 7.885922 ACTCCACACTAGGATCATATGTAGTAG 59.114 40.741 1.90 3.20 36.99 2.57
236 237 7.665974 CACTCCACACTAGGATCATATGTAGTA 59.334 40.741 1.90 0.00 36.99 1.82
237 238 6.491745 CACTCCACACTAGGATCATATGTAGT 59.508 42.308 1.90 0.37 36.99 2.73
238 239 6.571344 GCACTCCACACTAGGATCATATGTAG 60.571 46.154 1.90 0.00 36.99 2.74
239 240 5.243954 GCACTCCACACTAGGATCATATGTA 59.756 44.000 1.90 0.00 36.99 2.29
240 241 4.039730 GCACTCCACACTAGGATCATATGT 59.960 45.833 1.90 0.00 36.99 2.29
241 242 4.282957 AGCACTCCACACTAGGATCATATG 59.717 45.833 0.00 0.00 36.99 1.78
242 243 4.487804 AGCACTCCACACTAGGATCATAT 58.512 43.478 0.00 0.00 36.99 1.78
243 244 3.891977 GAGCACTCCACACTAGGATCATA 59.108 47.826 0.00 0.00 36.99 2.15
244 245 2.697751 GAGCACTCCACACTAGGATCAT 59.302 50.000 0.00 0.00 36.99 2.45
245 246 2.103373 GAGCACTCCACACTAGGATCA 58.897 52.381 0.00 0.00 36.99 2.92
246 247 1.066303 CGAGCACTCCACACTAGGATC 59.934 57.143 0.00 0.00 36.99 3.36
247 248 1.107114 CGAGCACTCCACACTAGGAT 58.893 55.000 0.00 0.00 36.99 3.24
248 249 0.965866 CCGAGCACTCCACACTAGGA 60.966 60.000 0.00 0.00 36.00 2.94
249 250 1.513158 CCGAGCACTCCACACTAGG 59.487 63.158 0.00 0.00 0.00 3.02
250 251 1.153745 GCCGAGCACTCCACACTAG 60.154 63.158 0.00 0.00 0.00 2.57
251 252 2.646175 GGCCGAGCACTCCACACTA 61.646 63.158 0.00 0.00 0.00 2.74
252 253 4.008933 GGCCGAGCACTCCACACT 62.009 66.667 0.00 0.00 0.00 3.55
253 254 3.537206 AAGGCCGAGCACTCCACAC 62.537 63.158 0.00 0.00 0.00 3.82
254 255 2.818169 AAAGGCCGAGCACTCCACA 61.818 57.895 0.00 0.00 0.00 4.17
255 256 2.032681 AAAGGCCGAGCACTCCAC 59.967 61.111 0.00 0.00 0.00 4.02
256 257 2.032528 CAAAGGCCGAGCACTCCA 59.967 61.111 0.00 0.00 0.00 3.86
257 258 3.435186 GCAAAGGCCGAGCACTCC 61.435 66.667 11.48 0.00 0.00 3.85
258 259 2.192608 CTTGCAAAGGCCGAGCACTC 62.193 60.000 17.46 0.00 41.27 3.51
259 260 2.203337 TTGCAAAGGCCGAGCACT 60.203 55.556 17.46 0.00 38.11 4.40
260 261 2.256461 CTTGCAAAGGCCGAGCAC 59.744 61.111 17.46 0.00 41.27 4.40
261 262 3.673484 GCTTGCAAAGGCCGAGCA 61.673 61.111 14.49 14.49 46.35 4.26
262 263 3.368571 AGCTTGCAAAGGCCGAGC 61.369 61.111 7.03 9.75 46.35 5.03
263 264 0.955428 TACAGCTTGCAAAGGCCGAG 60.955 55.000 7.03 1.43 46.35 4.63
264 265 0.536233 TTACAGCTTGCAAAGGCCGA 60.536 50.000 7.03 0.00 46.35 5.54
265 266 0.527565 ATTACAGCTTGCAAAGGCCG 59.472 50.000 7.03 0.03 46.35 6.13
266 267 1.821136 AGATTACAGCTTGCAAAGGCC 59.179 47.619 7.03 0.00 46.35 5.19
267 268 3.582714 AAGATTACAGCTTGCAAAGGC 57.417 42.857 0.00 0.81 46.35 4.35
268 269 7.276438 GGAAATTAAGATTACAGCTTGCAAAGG 59.724 37.037 0.00 0.00 46.35 3.11
270 271 7.895759 AGGAAATTAAGATTACAGCTTGCAAA 58.104 30.769 0.00 0.00 0.00 3.68
271 272 7.466746 AGGAAATTAAGATTACAGCTTGCAA 57.533 32.000 0.00 0.00 0.00 4.08
272 273 7.466746 AAGGAAATTAAGATTACAGCTTGCA 57.533 32.000 0.00 0.00 0.00 4.08
273 274 8.763049 AAAAGGAAATTAAGATTACAGCTTGC 57.237 30.769 0.00 0.00 0.00 4.01
274 275 9.912634 TGAAAAGGAAATTAAGATTACAGCTTG 57.087 29.630 0.00 0.00 0.00 4.01
282 283 9.591792 GCAGCTAATGAAAAGGAAATTAAGATT 57.408 29.630 0.00 0.00 0.00 2.40
283 284 8.200120 GGCAGCTAATGAAAAGGAAATTAAGAT 58.800 33.333 0.00 0.00 0.00 2.40
284 285 7.397192 AGGCAGCTAATGAAAAGGAAATTAAGA 59.603 33.333 0.00 0.00 0.00 2.10
285 286 7.490402 CAGGCAGCTAATGAAAAGGAAATTAAG 59.510 37.037 0.00 0.00 0.00 1.85
286 287 7.039082 ACAGGCAGCTAATGAAAAGGAAATTAA 60.039 33.333 0.00 0.00 0.00 1.40
287 288 6.437162 ACAGGCAGCTAATGAAAAGGAAATTA 59.563 34.615 0.00 0.00 0.00 1.40
288 289 5.246883 ACAGGCAGCTAATGAAAAGGAAATT 59.753 36.000 0.00 0.00 0.00 1.82
289 290 4.774200 ACAGGCAGCTAATGAAAAGGAAAT 59.226 37.500 0.00 0.00 0.00 2.17
290 291 4.022068 CACAGGCAGCTAATGAAAAGGAAA 60.022 41.667 0.00 0.00 0.00 3.13
291 292 3.507233 CACAGGCAGCTAATGAAAAGGAA 59.493 43.478 0.00 0.00 0.00 3.36
292 293 3.084039 CACAGGCAGCTAATGAAAAGGA 58.916 45.455 0.00 0.00 0.00 3.36
293 294 3.084039 TCACAGGCAGCTAATGAAAAGG 58.916 45.455 0.00 0.00 0.00 3.11
294 295 4.380233 CCTTCACAGGCAGCTAATGAAAAG 60.380 45.833 0.00 0.00 31.53 2.27
295 296 3.507233 CCTTCACAGGCAGCTAATGAAAA 59.493 43.478 0.00 0.00 31.53 2.29
296 297 3.084039 CCTTCACAGGCAGCTAATGAAA 58.916 45.455 0.00 0.00 31.53 2.69
297 298 2.040278 ACCTTCACAGGCAGCTAATGAA 59.960 45.455 0.00 0.00 45.56 2.57
298 299 1.630369 ACCTTCACAGGCAGCTAATGA 59.370 47.619 0.00 0.00 45.56 2.57
299 300 2.119801 ACCTTCACAGGCAGCTAATG 57.880 50.000 0.00 0.00 45.56 1.90
300 301 2.224867 ACAACCTTCACAGGCAGCTAAT 60.225 45.455 0.00 0.00 45.56 1.73
301 302 1.142870 ACAACCTTCACAGGCAGCTAA 59.857 47.619 0.00 0.00 45.56 3.09
302 303 0.764890 ACAACCTTCACAGGCAGCTA 59.235 50.000 0.00 0.00 45.56 3.32
303 304 0.764890 TACAACCTTCACAGGCAGCT 59.235 50.000 0.00 0.00 45.56 4.24
304 305 1.160137 CTACAACCTTCACAGGCAGC 58.840 55.000 0.00 0.00 45.56 5.25
305 306 2.550830 ACTACAACCTTCACAGGCAG 57.449 50.000 0.00 0.00 45.56 4.85
306 307 3.805807 GCTAACTACAACCTTCACAGGCA 60.806 47.826 0.00 0.00 45.56 4.75
307 308 2.742589 GCTAACTACAACCTTCACAGGC 59.257 50.000 0.00 0.00 45.56 4.85
309 310 3.650139 ACGCTAACTACAACCTTCACAG 58.350 45.455 0.00 0.00 0.00 3.66
310 311 3.738830 ACGCTAACTACAACCTTCACA 57.261 42.857 0.00 0.00 0.00 3.58
311 312 4.508861 TGAAACGCTAACTACAACCTTCAC 59.491 41.667 0.00 0.00 0.00 3.18
312 313 4.695396 TGAAACGCTAACTACAACCTTCA 58.305 39.130 0.00 0.00 0.00 3.02
313 314 4.748600 ACTGAAACGCTAACTACAACCTTC 59.251 41.667 0.00 0.00 0.00 3.46
314 315 4.700700 ACTGAAACGCTAACTACAACCTT 58.299 39.130 0.00 0.00 0.00 3.50
315 316 4.304939 GACTGAAACGCTAACTACAACCT 58.695 43.478 0.00 0.00 0.00 3.50
316 317 3.431233 GGACTGAAACGCTAACTACAACC 59.569 47.826 0.00 0.00 0.00 3.77
317 318 4.053295 TGGACTGAAACGCTAACTACAAC 58.947 43.478 0.00 0.00 0.00 3.32
318 319 4.202182 ACTGGACTGAAACGCTAACTACAA 60.202 41.667 0.00 0.00 0.00 2.41
319 320 3.319972 ACTGGACTGAAACGCTAACTACA 59.680 43.478 0.00 0.00 0.00 2.74
320 321 3.673809 CACTGGACTGAAACGCTAACTAC 59.326 47.826 0.00 0.00 0.00 2.73
321 322 3.319972 ACACTGGACTGAAACGCTAACTA 59.680 43.478 0.00 0.00 0.00 2.24
322 323 2.102588 ACACTGGACTGAAACGCTAACT 59.897 45.455 0.00 0.00 0.00 2.24
323 324 2.480845 ACACTGGACTGAAACGCTAAC 58.519 47.619 0.00 0.00 0.00 2.34
324 325 2.902705 ACACTGGACTGAAACGCTAA 57.097 45.000 0.00 0.00 0.00 3.09
325 326 2.547218 GGAACACTGGACTGAAACGCTA 60.547 50.000 0.00 0.00 0.00 4.26
326 327 1.583054 GAACACTGGACTGAAACGCT 58.417 50.000 0.00 0.00 0.00 5.07
327 328 0.586802 GGAACACTGGACTGAAACGC 59.413 55.000 0.00 0.00 0.00 4.84
328 329 1.226746 GGGAACACTGGACTGAAACG 58.773 55.000 0.00 0.00 0.00 3.60
329 330 1.133915 TGGGGAACACTGGACTGAAAC 60.134 52.381 0.00 0.00 0.00 2.78
330 331 1.217916 TGGGGAACACTGGACTGAAA 58.782 50.000 0.00 0.00 0.00 2.69
331 332 1.444933 ATGGGGAACACTGGACTGAA 58.555 50.000 0.00 0.00 0.00 3.02
332 333 1.073763 CAATGGGGAACACTGGACTGA 59.926 52.381 0.00 0.00 0.00 3.41
333 334 1.202927 ACAATGGGGAACACTGGACTG 60.203 52.381 0.00 0.00 0.00 3.51
334 335 1.149101 ACAATGGGGAACACTGGACT 58.851 50.000 0.00 0.00 0.00 3.85
335 336 2.871096 TACAATGGGGAACACTGGAC 57.129 50.000 0.00 0.00 0.00 4.02
336 337 2.093181 CGATACAATGGGGAACACTGGA 60.093 50.000 0.00 0.00 0.00 3.86
337 338 2.288666 CGATACAATGGGGAACACTGG 58.711 52.381 0.00 0.00 0.00 4.00
338 339 2.985896 ACGATACAATGGGGAACACTG 58.014 47.619 0.00 0.00 0.00 3.66
339 340 3.263425 AGAACGATACAATGGGGAACACT 59.737 43.478 0.00 0.00 0.00 3.55
340 341 3.374058 CAGAACGATACAATGGGGAACAC 59.626 47.826 0.00 0.00 0.00 3.32
341 342 3.605634 CAGAACGATACAATGGGGAACA 58.394 45.455 0.00 0.00 0.00 3.18
342 343 2.943033 CCAGAACGATACAATGGGGAAC 59.057 50.000 0.00 0.00 0.00 3.62
343 344 2.682563 GCCAGAACGATACAATGGGGAA 60.683 50.000 0.00 0.00 0.00 3.97
344 345 1.134220 GCCAGAACGATACAATGGGGA 60.134 52.381 0.00 0.00 0.00 4.81
345 346 1.308998 GCCAGAACGATACAATGGGG 58.691 55.000 0.00 0.00 0.00 4.96
346 347 1.308998 GGCCAGAACGATACAATGGG 58.691 55.000 0.00 0.00 0.00 4.00
347 348 0.937304 CGGCCAGAACGATACAATGG 59.063 55.000 2.24 0.00 0.00 3.16
348 349 1.651987 ACGGCCAGAACGATACAATG 58.348 50.000 2.24 0.00 34.93 2.82
349 350 2.006888 CAACGGCCAGAACGATACAAT 58.993 47.619 2.24 0.00 34.93 2.71
350 351 1.270412 ACAACGGCCAGAACGATACAA 60.270 47.619 2.24 0.00 34.93 2.41
351 352 0.319083 ACAACGGCCAGAACGATACA 59.681 50.000 2.24 0.00 34.93 2.29
352 353 2.282701 TACAACGGCCAGAACGATAC 57.717 50.000 2.24 0.00 34.93 2.24
353 354 3.530265 ATTACAACGGCCAGAACGATA 57.470 42.857 2.24 0.00 34.93 2.92
354 355 2.396590 ATTACAACGGCCAGAACGAT 57.603 45.000 2.24 0.00 34.93 3.73
355 356 2.172851 AATTACAACGGCCAGAACGA 57.827 45.000 2.24 0.00 34.93 3.85
356 357 2.580589 CAAATTACAACGGCCAGAACG 58.419 47.619 2.24 0.00 37.36 3.95
357 358 2.295070 ACCAAATTACAACGGCCAGAAC 59.705 45.455 2.24 0.00 0.00 3.01
358 359 2.588620 ACCAAATTACAACGGCCAGAA 58.411 42.857 2.24 0.00 0.00 3.02
359 360 2.279935 ACCAAATTACAACGGCCAGA 57.720 45.000 2.24 0.00 0.00 3.86
360 361 2.035321 ACAACCAAATTACAACGGCCAG 59.965 45.455 2.24 0.00 0.00 4.85
361 362 2.032620 ACAACCAAATTACAACGGCCA 58.967 42.857 2.24 0.00 0.00 5.36
362 363 2.804697 ACAACCAAATTACAACGGCC 57.195 45.000 0.00 0.00 0.00 6.13
363 364 3.866327 ACAAACAACCAAATTACAACGGC 59.134 39.130 0.00 0.00 0.00 5.68
364 365 5.348997 ACAACAAACAACCAAATTACAACGG 59.651 36.000 0.00 0.00 0.00 4.44
365 366 6.396459 ACAACAAACAACCAAATTACAACG 57.604 33.333 0.00 0.00 0.00 4.10
366 367 8.927721 AGTTACAACAAACAACCAAATTACAAC 58.072 29.630 0.00 0.00 0.00 3.32
367 368 9.141400 GAGTTACAACAAACAACCAAATTACAA 57.859 29.630 0.00 0.00 0.00 2.41
368 369 7.760340 GGAGTTACAACAAACAACCAAATTACA 59.240 33.333 0.00 0.00 32.29 2.41
369 370 7.977293 AGGAGTTACAACAAACAACCAAATTAC 59.023 33.333 0.00 0.00 33.50 1.89
370 371 7.976734 CAGGAGTTACAACAAACAACCAAATTA 59.023 33.333 0.00 0.00 33.50 1.40
371 372 6.816140 CAGGAGTTACAACAAACAACCAAATT 59.184 34.615 0.00 0.00 33.50 1.82
372 373 6.153680 TCAGGAGTTACAACAAACAACCAAAT 59.846 34.615 0.00 0.00 33.50 2.32
373 374 5.477291 TCAGGAGTTACAACAAACAACCAAA 59.523 36.000 0.00 0.00 33.50 3.28
374 375 5.010933 TCAGGAGTTACAACAAACAACCAA 58.989 37.500 0.00 0.00 33.50 3.67
375 376 4.396790 GTCAGGAGTTACAACAAACAACCA 59.603 41.667 0.00 0.00 33.50 3.67
376 377 4.201980 GGTCAGGAGTTACAACAAACAACC 60.202 45.833 0.00 0.00 0.00 3.77
377 378 4.495184 CGGTCAGGAGTTACAACAAACAAC 60.495 45.833 0.00 0.00 0.00 3.32
378 379 3.623960 CGGTCAGGAGTTACAACAAACAA 59.376 43.478 0.00 0.00 0.00 2.83
379 380 3.199677 CGGTCAGGAGTTACAACAAACA 58.800 45.455 0.00 0.00 0.00 2.83
380 381 2.546789 CCGGTCAGGAGTTACAACAAAC 59.453 50.000 0.00 0.00 45.00 2.93
381 382 2.171027 ACCGGTCAGGAGTTACAACAAA 59.829 45.455 0.00 0.00 45.00 2.83
382 383 1.764134 ACCGGTCAGGAGTTACAACAA 59.236 47.619 0.00 0.00 45.00 2.83
383 384 1.416243 ACCGGTCAGGAGTTACAACA 58.584 50.000 0.00 0.00 45.00 3.33
384 385 2.140717 CAACCGGTCAGGAGTTACAAC 58.859 52.381 8.04 0.00 45.00 3.32
385 386 2.040939 TCAACCGGTCAGGAGTTACAA 58.959 47.619 8.04 0.00 45.00 2.41
386 387 1.707106 TCAACCGGTCAGGAGTTACA 58.293 50.000 8.04 0.00 45.00 2.41
387 388 3.737355 GCTATCAACCGGTCAGGAGTTAC 60.737 52.174 8.04 0.00 45.00 2.50
388 389 2.429610 GCTATCAACCGGTCAGGAGTTA 59.570 50.000 8.04 0.00 45.00 2.24
389 390 1.207329 GCTATCAACCGGTCAGGAGTT 59.793 52.381 8.04 0.00 45.00 3.01
390 391 0.824759 GCTATCAACCGGTCAGGAGT 59.175 55.000 8.04 0.00 45.00 3.85
391 392 0.105039 GGCTATCAACCGGTCAGGAG 59.895 60.000 8.04 4.74 45.00 3.69
392 393 2.208527 GGCTATCAACCGGTCAGGA 58.791 57.895 8.04 6.81 45.00 3.86
400 401 0.533085 GAAGAGCCCGGCTATCAACC 60.533 60.000 13.29 0.00 39.88 3.77
401 402 0.876342 CGAAGAGCCCGGCTATCAAC 60.876 60.000 13.29 0.00 39.88 3.18
402 403 1.327690 ACGAAGAGCCCGGCTATCAA 61.328 55.000 13.29 0.00 39.88 2.57
403 404 1.756950 ACGAAGAGCCCGGCTATCA 60.757 57.895 13.29 0.00 39.88 2.15
404 405 1.300233 CACGAAGAGCCCGGCTATC 60.300 63.158 13.29 12.93 39.88 2.08
405 406 1.739338 CTCACGAAGAGCCCGGCTAT 61.739 60.000 13.29 6.24 39.88 2.97
406 407 2.361992 TCACGAAGAGCCCGGCTA 60.362 61.111 13.29 0.00 39.88 3.93
407 408 3.764466 CTCACGAAGAGCCCGGCT 61.764 66.667 13.16 13.16 43.88 5.52
415 416 0.959553 AGAACGAAGGCTCACGAAGA 59.040 50.000 18.05 0.00 0.00 2.87
416 417 2.631418 TAGAACGAAGGCTCACGAAG 57.369 50.000 18.05 0.00 0.00 3.79
417 418 3.374220 TTTAGAACGAAGGCTCACGAA 57.626 42.857 18.05 2.50 0.00 3.85
418 419 3.374220 TTTTAGAACGAAGGCTCACGA 57.626 42.857 18.05 0.00 0.00 4.35
419 420 3.493503 ACTTTTTAGAACGAAGGCTCACG 59.506 43.478 11.41 11.41 0.00 4.35
420 421 4.750598 AGACTTTTTAGAACGAAGGCTCAC 59.249 41.667 0.00 0.00 33.57 3.51
421 422 4.957296 AGACTTTTTAGAACGAAGGCTCA 58.043 39.130 0.00 0.00 33.57 4.26
422 423 5.924825 TGTAGACTTTTTAGAACGAAGGCTC 59.075 40.000 0.00 0.00 39.40 4.70
423 424 5.695363 GTGTAGACTTTTTAGAACGAAGGCT 59.305 40.000 0.00 0.00 41.46 4.58
424 425 5.695363 AGTGTAGACTTTTTAGAACGAAGGC 59.305 40.000 0.00 0.00 0.00 4.35
425 426 8.861101 CATAGTGTAGACTTTTTAGAACGAAGG 58.139 37.037 0.00 0.00 33.21 3.46
426 427 9.408069 ACATAGTGTAGACTTTTTAGAACGAAG 57.592 33.333 0.00 0.00 33.21 3.79
427 428 9.754382 AACATAGTGTAGACTTTTTAGAACGAA 57.246 29.630 0.00 0.00 33.21 3.85
428 429 9.754382 AAACATAGTGTAGACTTTTTAGAACGA 57.246 29.630 0.00 0.00 33.21 3.85
429 430 9.793245 CAAACATAGTGTAGACTTTTTAGAACG 57.207 33.333 0.00 0.00 33.21 3.95
435 436 9.498307 CGAAAACAAACATAGTGTAGACTTTTT 57.502 29.630 0.00 0.00 33.21 1.94
436 437 7.642586 GCGAAAACAAACATAGTGTAGACTTTT 59.357 33.333 0.00 0.00 33.21 2.27
437 438 7.130269 GCGAAAACAAACATAGTGTAGACTTT 58.870 34.615 0.00 0.00 33.21 2.66
438 439 6.259167 TGCGAAAACAAACATAGTGTAGACTT 59.741 34.615 0.00 0.00 33.21 3.01
454 455 1.780806 TCGTCGGTAATGCGAAAACA 58.219 45.000 0.00 0.00 0.00 2.83
481 482 1.151777 GCCATGTGCTATACGTGCGT 61.152 55.000 0.00 2.05 43.53 5.24
509 510 3.040763 GCGAGCCGGCATGATCTC 61.041 66.667 31.54 15.45 0.00 2.75
627 631 0.549950 TGGTCCTACTCCTACCTCCG 59.450 60.000 0.00 0.00 34.23 4.63
716 764 3.669122 GTGATGACGTATTAGGATCGTGC 59.331 47.826 0.00 0.00 37.92 5.34
787 938 7.227314 TGCTCCATTTTGTATCAGTATTAGCAG 59.773 37.037 0.00 0.00 30.86 4.24
788 939 7.053498 TGCTCCATTTTGTATCAGTATTAGCA 58.947 34.615 0.00 0.00 0.00 3.49
794 945 4.842574 TGCTGCTCCATTTTGTATCAGTA 58.157 39.130 0.00 0.00 0.00 2.74
795 946 3.689347 TGCTGCTCCATTTTGTATCAGT 58.311 40.909 0.00 0.00 0.00 3.41
796 947 3.693085 ACTGCTGCTCCATTTTGTATCAG 59.307 43.478 0.00 0.00 0.00 2.90
863 1020 2.301346 GGGATCGATGTGAATTGGCTT 58.699 47.619 0.54 0.00 0.00 4.35
897 1068 1.733526 GCACTTGCTTGGTTTCGGT 59.266 52.632 0.00 0.00 38.21 4.69
905 1076 4.047059 CTGGCCGGCACTTGCTTG 62.047 66.667 30.85 4.31 41.70 4.01
975 1175 6.435591 TCTCTTCTGCAGATGACTTCTTCTTA 59.564 38.462 24.24 2.28 29.93 2.10
996 1197 1.118356 GTCCCATCGAGCCCATCTCT 61.118 60.000 0.00 0.00 39.70 3.10
1246 1458 1.469335 ATGTCCTGGGTGACGTCGTT 61.469 55.000 11.62 0.00 38.11 3.85
1524 1736 2.008329 ACAAAAACAGCACGTACGGAA 58.992 42.857 21.06 0.00 0.00 4.30
1526 1738 2.461897 AACAAAAACAGCACGTACGG 57.538 45.000 21.06 9.73 0.00 4.02
1534 1758 7.634432 GCACTATAACAACAAAACAAAAACAGC 59.366 33.333 0.00 0.00 0.00 4.40
1554 1783 3.554692 GCTTGACGCGCGCACTAT 61.555 61.111 32.58 10.34 0.00 2.12
1947 2211 1.153086 GCTGAGGTTGATGGCCGAT 60.153 57.895 0.00 0.00 0.00 4.18
1981 2245 4.779475 CCACTCAAGGCACTCGTT 57.221 55.556 0.00 0.00 38.49 3.85
2064 2328 1.073025 AAACTCCACCATCTGCGCA 59.927 52.632 10.98 10.98 0.00 6.09
2265 2529 2.743928 GAGTTCCAGCCGCTGTGG 60.744 66.667 18.98 5.97 42.50 4.17
2334 2598 3.555324 TTGGTCTGCTGGTCGGCA 61.555 61.111 4.30 4.30 40.15 5.69
2361 2625 1.303561 GCCCCACTCATTGCACTGA 60.304 57.895 6.58 6.58 0.00 3.41
2435 2699 1.063183 CTCCCCTTCCATGATCTCCC 58.937 60.000 0.00 0.00 0.00 4.30
2460 2724 2.093606 TGCTCTCTTCCTCATGCTCTTG 60.094 50.000 0.00 0.00 0.00 3.02
2481 2745 1.181786 CGCTCTCCTTCCAGTTCTCT 58.818 55.000 0.00 0.00 0.00 3.10
2485 2749 2.262915 CGCGCTCTCCTTCCAGTT 59.737 61.111 5.56 0.00 0.00 3.16
2526 2790 2.861935 GTCGAAGTTTTGGTGAGACGAA 59.138 45.455 0.00 0.00 0.00 3.85
2537 2801 1.947456 GGACCAGCTTGTCGAAGTTTT 59.053 47.619 11.49 0.00 36.07 2.43
2577 2841 7.763528 CAGTGAAGATCAATGTAGAGCTAGTTT 59.236 37.037 0.00 0.00 37.65 2.66
2649 2931 3.485463 TCACTGTCCAAAGGAACGAAT 57.515 42.857 0.00 0.00 31.38 3.34
2661 2943 2.044946 GGGCCACCATCACTGTCC 60.045 66.667 4.39 0.00 36.50 4.02
2664 2946 1.077930 CTCAGGGCCACCATCACTG 60.078 63.158 6.18 0.00 40.13 3.66
2694 2976 3.877508 AGCTTCCCGTATGTTTAGCATTC 59.122 43.478 0.00 0.00 38.94 2.67
2712 2995 4.768968 ACATCAGCACTCCATAAAAAGCTT 59.231 37.500 0.00 0.00 0.00 3.74
2812 3095 6.377146 GGATTAAAAGTTGCCATCTGGTAGAA 59.623 38.462 0.00 0.00 37.57 2.10
2818 3101 5.389859 TGTGGATTAAAAGTTGCCATCTG 57.610 39.130 0.00 0.00 0.00 2.90
2819 3102 6.610075 AATGTGGATTAAAAGTTGCCATCT 57.390 33.333 0.00 0.00 0.00 2.90
2892 3175 6.624861 CGTCTGTACATGGTGGCAAAAATATT 60.625 38.462 0.00 0.00 0.00 1.28
2976 3427 6.976934 ACAAATAGTTGTTCTCCCACATTT 57.023 33.333 2.02 0.00 46.01 2.32
2983 3434 6.861572 GGCAAACTTACAAATAGTTGTTCTCC 59.138 38.462 14.46 3.25 46.01 3.71
2997 3448 5.950758 AATCGTAACATGGCAAACTTACA 57.049 34.783 0.00 0.00 0.00 2.41
3034 3485 9.994432 CTCTAGAGCATGGTAAAATGTAAAAAG 57.006 33.333 6.86 0.00 0.00 2.27
3035 3486 9.733556 TCTCTAGAGCATGGTAAAATGTAAAAA 57.266 29.630 15.35 0.00 0.00 1.94
3037 3488 9.733556 TTTCTCTAGAGCATGGTAAAATGTAAA 57.266 29.630 15.35 2.50 0.00 2.01
3038 3489 9.733556 TTTTCTCTAGAGCATGGTAAAATGTAA 57.266 29.630 15.35 0.00 0.00 2.41
3039 3490 9.905713 ATTTTCTCTAGAGCATGGTAAAATGTA 57.094 29.630 19.17 2.21 0.00 2.29
3040 3491 8.814038 ATTTTCTCTAGAGCATGGTAAAATGT 57.186 30.769 19.17 5.24 0.00 2.71
3041 3492 9.512435 CAATTTTCTCTAGAGCATGGTAAAATG 57.488 33.333 19.99 13.69 0.00 2.32
3042 3493 9.247861 ACAATTTTCTCTAGAGCATGGTAAAAT 57.752 29.630 15.35 15.90 0.00 1.82
3043 3494 8.635765 ACAATTTTCTCTAGAGCATGGTAAAA 57.364 30.769 15.35 14.46 0.00 1.52
3048 3499 8.149647 AGATAGACAATTTTCTCTAGAGCATGG 58.850 37.037 15.35 7.00 0.00 3.66
3113 3564 4.832823 ACGTCCATCCATGTCACATAGATA 59.167 41.667 0.00 0.00 0.00 1.98
3122 3573 0.811616 GGCAGACGTCCATCCATGTC 60.812 60.000 13.01 0.00 33.10 3.06
3150 3601 3.259902 GTGGTCGGGTTTAAGATCTCAC 58.740 50.000 0.00 0.00 0.00 3.51
3151 3602 2.901192 TGTGGTCGGGTTTAAGATCTCA 59.099 45.455 0.00 0.00 0.00 3.27
3173 3624 0.251832 AAGGGTGGCGAGAAGAGAGA 60.252 55.000 0.00 0.00 0.00 3.10
3179 3630 2.646175 CGGAGAAGGGTGGCGAGAA 61.646 63.158 0.00 0.00 0.00 2.87
3211 3662 1.135915 GTTGTGACAATGTTGGTGGCA 59.864 47.619 0.00 0.00 0.00 4.92
3217 3668 4.558470 GTCAACTGTGTTGTGACAATGTTG 59.442 41.667 19.83 19.83 44.11 3.33
3243 3694 6.761242 GTGAGTTGCTATGTGATAACATGGTA 59.239 38.462 5.89 0.00 32.20 3.25
3245 3696 5.585844 TGTGAGTTGCTATGTGATAACATGG 59.414 40.000 5.89 3.94 0.00 3.66
3250 3701 8.962884 AATACATGTGAGTTGCTATGTGATAA 57.037 30.769 9.11 0.00 35.55 1.75
3251 3702 8.962884 AAATACATGTGAGTTGCTATGTGATA 57.037 30.769 9.11 0.00 35.55 2.15
3293 3788 4.782691 TTCTATGGAAGACATGGTTCTCCA 59.217 41.667 9.62 9.62 40.82 3.86
3355 3850 5.482908 AGAGCAACTTTACCAGATACACAG 58.517 41.667 0.00 0.00 0.00 3.66
3365 3860 1.392510 CCGCGTAAGAGCAACTTTACC 59.607 52.381 4.92 0.00 39.72 2.85
3366 3861 1.392510 CCCGCGTAAGAGCAACTTTAC 59.607 52.381 4.92 0.00 39.72 2.01
3390 3885 2.435938 TCGGCGTTTGAGGGATGC 60.436 61.111 6.85 0.00 0.00 3.91
3416 3911 2.338500 GAATGAGACCCGTTGTGAGAC 58.662 52.381 0.00 0.00 0.00 3.36
3418 3913 1.350193 CGAATGAGACCCGTTGTGAG 58.650 55.000 0.00 0.00 0.00 3.51
3439 3934 2.561037 AAAAAGGTCCCTTGCGCGG 61.561 57.895 8.83 0.00 36.26 6.46
3462 3957 9.760660 CTTTCGGAAATCACTTACAAAGATTAG 57.239 33.333 3.24 0.00 32.11 1.73
3499 3994 8.797350 TTGACATCAGATTTATCACTGAACAT 57.203 30.769 0.00 0.00 44.47 2.71
3502 3997 7.884877 AGGTTTGACATCAGATTTATCACTGAA 59.115 33.333 0.00 0.00 44.47 3.02
3507 4002 8.634335 TTTCAGGTTTGACATCAGATTTATCA 57.366 30.769 0.00 0.00 31.71 2.15
3520 4015 3.126858 TCGCATGCTATTTCAGGTTTGAC 59.873 43.478 17.13 0.00 31.71 3.18
3535 4030 0.804364 TTCCATGAGTTGTCGCATGC 59.196 50.000 7.91 7.91 45.76 4.06
3536 4031 3.770263 ATTTCCATGAGTTGTCGCATG 57.230 42.857 0.00 0.00 46.34 4.06
3540 4035 9.098355 TCTAAATAGAATTTCCATGAGTTGTCG 57.902 33.333 0.00 0.00 0.00 4.35



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.