Multiple sequence alignment - TraesCS6D01G092900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G092900 chr6D 100.000 3332 0 0 1 3332 58046068 58049399 0.000000e+00 6154.0
1 TraesCS6D01G092900 chr6D 74.357 1127 229 47 1047 2149 57171290 57172380 3.070000e-115 425.0
2 TraesCS6D01G092900 chr6D 74.208 1136 233 40 1047 2152 57158856 57159961 1.430000e-113 420.0
3 TraesCS6D01G092900 chr6D 79.299 628 103 19 1051 1672 57215930 57216536 6.650000e-112 414.0
4 TraesCS6D01G092900 chr6D 74.233 652 123 34 1059 1677 58095233 58095872 7.190000e-57 231.0
5 TraesCS6D01G092900 chr6B 94.836 2440 93 10 915 3329 130313385 130315816 0.000000e+00 3777.0
6 TraesCS6D01G092900 chr6B 77.105 1223 209 47 1051 2236 129268713 129269901 2.800000e-180 641.0
7 TraesCS6D01G092900 chr6B 89.655 435 39 4 652 1081 130312316 130312749 1.750000e-152 549.0
8 TraesCS6D01G092900 chr6B 74.689 1126 227 45 1047 2149 129237173 129238263 6.560000e-122 448.0
9 TraesCS6D01G092900 chr6B 74.600 1126 228 44 1047 2149 128016555 128017645 3.050000e-120 442.0
10 TraesCS6D01G092900 chr6B 74.159 654 122 32 1058 1677 130324414 130325054 9.300000e-56 228.0
11 TraesCS6D01G092900 chr6A 96.268 1822 65 3 915 2735 73379231 73381050 0.000000e+00 2985.0
12 TraesCS6D01G092900 chr6A 94.444 612 29 3 2726 3332 73382295 73382906 0.000000e+00 937.0
13 TraesCS6D01G092900 chr6A 74.425 1130 230 41 1047 2148 71924735 71925833 6.600000e-117 431.0
14 TraesCS6D01G092900 chr6A 75.882 510 103 16 1161 1662 73510490 73510987 3.320000e-60 243.0
15 TraesCS6D01G092900 chr7D 85.333 225 27 5 1058 1282 583548648 583548866 9.300000e-56 228.0
16 TraesCS6D01G092900 chr7D 85.437 206 24 3 1058 1263 634650754 634650953 3.370000e-50 209.0
17 TraesCS6D01G092900 chr7D 89.815 108 8 2 718 824 15877271 15877166 5.800000e-28 135.0
18 TraesCS6D01G092900 chr7D 90.385 52 4 1 1342 1392 634751053 634751002 2.150000e-07 67.6
19 TraesCS6D01G092900 chr7B 85.333 225 27 4 1058 1282 741482203 741482421 9.300000e-56 228.0
20 TraesCS6D01G092900 chr7A 81.193 218 21 13 1058 1274 731126160 731126358 1.240000e-34 158.0
21 TraesCS6D01G092900 chr7A 77.372 274 33 15 574 824 14798075 14797808 5.800000e-28 135.0
22 TraesCS6D01G092900 chr1B 82.840 169 20 3 229 389 14186768 14186601 3.470000e-30 143.0
23 TraesCS6D01G092900 chr3D 89.189 111 9 2 715 824 584962945 584963053 5.800000e-28 135.0
24 TraesCS6D01G092900 chr3D 79.310 116 14 6 225 330 533318241 533318356 4.610000e-09 73.1
25 TraesCS6D01G092900 chr3D 97.500 40 1 0 291 330 533378669 533378708 5.960000e-08 69.4
26 TraesCS6D01G092900 chr3D 97.500 40 1 0 291 330 533396437 533396476 5.960000e-08 69.4
27 TraesCS6D01G092900 chr5D 90.385 52 2 3 43 91 487600247 487600196 7.720000e-07 65.8
28 TraesCS6D01G092900 chr3A 95.000 40 2 0 291 330 668876594 668876633 2.780000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G092900 chr6D 58046068 58049399 3331 False 6154 6154 100.0000 1 3332 1 chr6D.!!$F4 3331
1 TraesCS6D01G092900 chr6D 57171290 57172380 1090 False 425 425 74.3570 1047 2149 1 chr6D.!!$F2 1102
2 TraesCS6D01G092900 chr6D 57158856 57159961 1105 False 420 420 74.2080 1047 2152 1 chr6D.!!$F1 1105
3 TraesCS6D01G092900 chr6D 57215930 57216536 606 False 414 414 79.2990 1051 1672 1 chr6D.!!$F3 621
4 TraesCS6D01G092900 chr6D 58095233 58095872 639 False 231 231 74.2330 1059 1677 1 chr6D.!!$F5 618
5 TraesCS6D01G092900 chr6B 130312316 130315816 3500 False 2163 3777 92.2455 652 3329 2 chr6B.!!$F5 2677
6 TraesCS6D01G092900 chr6B 129268713 129269901 1188 False 641 641 77.1050 1051 2236 1 chr6B.!!$F3 1185
7 TraesCS6D01G092900 chr6B 129237173 129238263 1090 False 448 448 74.6890 1047 2149 1 chr6B.!!$F2 1102
8 TraesCS6D01G092900 chr6B 128016555 128017645 1090 False 442 442 74.6000 1047 2149 1 chr6B.!!$F1 1102
9 TraesCS6D01G092900 chr6B 130324414 130325054 640 False 228 228 74.1590 1058 1677 1 chr6B.!!$F4 619
10 TraesCS6D01G092900 chr6A 73379231 73382906 3675 False 1961 2985 95.3560 915 3332 2 chr6A.!!$F3 2417
11 TraesCS6D01G092900 chr6A 71924735 71925833 1098 False 431 431 74.4250 1047 2148 1 chr6A.!!$F1 1101

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 449 0.036732 CTTGGTGCTCTTGGGTGCTA 59.963 55.0 0.00 0.0 33.63 3.49 F
463 464 0.387929 TGCTAGCGCACCCTATGTAC 59.612 55.0 11.47 0.0 42.25 2.90 F
468 469 0.391927 GCGCACCCTATGTACACCAA 60.392 55.0 0.30 0.0 0.00 3.67 F
2280 3171 0.725784 CATGCTTCAACCACGAACGC 60.726 55.0 0.00 0.0 0.00 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 2808 0.988832 TACCCACTACAAAGCCAGGG 59.011 55.000 0.00 0.0 38.16 4.45 R
2280 3171 1.067582 GCCGAAGTATGGGAGGACG 59.932 63.158 0.00 0.0 0.00 4.79 R
2285 3176 1.342672 GGGGAAGCCGAAGTATGGGA 61.343 60.000 0.00 0.0 0.00 4.37 R
3165 5319 1.905839 TCCCAGGGCCATCTTATGAA 58.094 50.000 6.18 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.988904 ACGAGAGTAATGCTACAGATTTTAC 57.011 36.000 0.00 0.00 46.88 2.01
31 32 6.691818 ACGAGAGTAATGCTACAGATTTTACG 59.308 38.462 0.00 0.00 46.88 3.18
32 33 6.142480 CGAGAGTAATGCTACAGATTTTACGG 59.858 42.308 0.00 0.00 0.00 4.02
33 34 7.108841 AGAGTAATGCTACAGATTTTACGGA 57.891 36.000 0.00 0.00 0.00 4.69
34 35 6.979238 AGAGTAATGCTACAGATTTTACGGAC 59.021 38.462 0.00 0.00 0.00 4.79
35 36 6.875076 AGTAATGCTACAGATTTTACGGACT 58.125 36.000 0.00 0.00 0.00 3.85
36 37 6.757010 AGTAATGCTACAGATTTTACGGACTG 59.243 38.462 0.00 0.00 36.58 3.51
37 38 3.259064 TGCTACAGATTTTACGGACTGC 58.741 45.455 0.00 0.00 34.25 4.40
38 39 3.259064 GCTACAGATTTTACGGACTGCA 58.741 45.455 0.00 0.00 34.25 4.41
39 40 3.682858 GCTACAGATTTTACGGACTGCAA 59.317 43.478 0.00 0.00 34.25 4.08
40 41 4.435651 GCTACAGATTTTACGGACTGCAAC 60.436 45.833 0.00 0.00 34.25 4.17
41 42 3.472652 ACAGATTTTACGGACTGCAACA 58.527 40.909 0.00 0.00 34.25 3.33
42 43 4.072131 ACAGATTTTACGGACTGCAACAT 58.928 39.130 0.00 0.00 34.25 2.71
43 44 4.083324 ACAGATTTTACGGACTGCAACATG 60.083 41.667 0.00 0.00 34.25 3.21
44 45 3.440173 AGATTTTACGGACTGCAACATGG 59.560 43.478 0.00 0.00 0.00 3.66
45 46 0.878416 TTTACGGACTGCAACATGGC 59.122 50.000 0.00 0.00 0.00 4.40
46 47 0.250510 TTACGGACTGCAACATGGCA 60.251 50.000 0.00 0.00 42.53 4.92
47 48 0.250510 TACGGACTGCAACATGGCAA 60.251 50.000 0.00 0.00 44.40 4.52
48 49 0.895100 ACGGACTGCAACATGGCAAT 60.895 50.000 0.00 0.00 44.40 3.56
49 50 0.244450 CGGACTGCAACATGGCAATT 59.756 50.000 0.00 0.00 44.40 2.32
50 51 1.337074 CGGACTGCAACATGGCAATTT 60.337 47.619 0.00 0.00 44.40 1.82
51 52 2.070783 GGACTGCAACATGGCAATTTG 58.929 47.619 0.00 6.99 44.40 2.32
52 53 2.548493 GGACTGCAACATGGCAATTTGT 60.548 45.455 11.69 0.29 44.40 2.83
53 54 2.477375 GACTGCAACATGGCAATTTGTG 59.523 45.455 11.69 8.36 44.40 3.33
54 55 1.801771 CTGCAACATGGCAATTTGTGG 59.198 47.619 11.69 2.14 44.40 4.17
55 56 1.140452 TGCAACATGGCAATTTGTGGT 59.860 42.857 11.69 0.00 41.65 4.16
56 57 2.220313 GCAACATGGCAATTTGTGGTT 58.780 42.857 11.69 0.00 0.00 3.67
57 58 2.031857 GCAACATGGCAATTTGTGGTTG 60.032 45.455 11.69 14.49 37.71 3.77
58 59 2.547299 ACATGGCAATTTGTGGTTGG 57.453 45.000 0.00 0.00 0.00 3.77
63 64 2.892374 GGCAATTTGTGGTTGGCTATC 58.108 47.619 5.33 0.00 45.48 2.08
64 65 2.233431 GGCAATTTGTGGTTGGCTATCA 59.767 45.455 5.33 0.00 45.48 2.15
65 66 3.514645 GCAATTTGTGGTTGGCTATCAG 58.485 45.455 0.00 0.00 0.00 2.90
66 67 3.056607 GCAATTTGTGGTTGGCTATCAGT 60.057 43.478 0.00 0.00 0.00 3.41
67 68 4.561326 GCAATTTGTGGTTGGCTATCAGTT 60.561 41.667 0.00 0.00 0.00 3.16
68 69 4.789012 ATTTGTGGTTGGCTATCAGTTG 57.211 40.909 0.00 0.00 0.00 3.16
69 70 2.198827 TGTGGTTGGCTATCAGTTGG 57.801 50.000 0.00 0.00 0.00 3.77
70 71 1.271871 TGTGGTTGGCTATCAGTTGGG 60.272 52.381 0.00 0.00 0.00 4.12
71 72 0.331278 TGGTTGGCTATCAGTTGGGG 59.669 55.000 0.00 0.00 0.00 4.96
72 73 0.623723 GGTTGGCTATCAGTTGGGGA 59.376 55.000 0.00 0.00 0.00 4.81
73 74 1.005450 GGTTGGCTATCAGTTGGGGAA 59.995 52.381 0.00 0.00 0.00 3.97
74 75 2.369394 GTTGGCTATCAGTTGGGGAAG 58.631 52.381 0.00 0.00 0.00 3.46
75 76 1.668826 TGGCTATCAGTTGGGGAAGT 58.331 50.000 0.00 0.00 0.00 3.01
76 77 1.281867 TGGCTATCAGTTGGGGAAGTG 59.718 52.381 0.00 0.00 0.00 3.16
77 78 1.383523 GCTATCAGTTGGGGAAGTGC 58.616 55.000 0.00 0.00 0.00 4.40
78 79 2.019156 GCTATCAGTTGGGGAAGTGCC 61.019 57.143 0.00 0.00 0.00 5.01
108 109 4.672899 CCCCCTTTGTGAAATTTAGAGGA 58.327 43.478 0.00 0.00 0.00 3.71
109 110 4.706962 CCCCCTTTGTGAAATTTAGAGGAG 59.293 45.833 0.00 0.00 0.00 3.69
110 111 4.706962 CCCCTTTGTGAAATTTAGAGGAGG 59.293 45.833 0.00 0.00 0.00 4.30
111 112 4.706962 CCCTTTGTGAAATTTAGAGGAGGG 59.293 45.833 11.73 11.73 34.68 4.30
112 113 4.706962 CCTTTGTGAAATTTAGAGGAGGGG 59.293 45.833 0.00 0.00 0.00 4.79
113 114 4.316025 TTGTGAAATTTAGAGGAGGGGG 57.684 45.455 0.00 0.00 0.00 5.40
130 131 3.662759 GGGGGAATTTGGTATGTGAGA 57.337 47.619 0.00 0.00 0.00 3.27
131 132 3.555966 GGGGGAATTTGGTATGTGAGAG 58.444 50.000 0.00 0.00 0.00 3.20
132 133 3.202151 GGGGGAATTTGGTATGTGAGAGA 59.798 47.826 0.00 0.00 0.00 3.10
133 134 4.200092 GGGGAATTTGGTATGTGAGAGAC 58.800 47.826 0.00 0.00 0.00 3.36
134 135 3.871594 GGGAATTTGGTATGTGAGAGACG 59.128 47.826 0.00 0.00 0.00 4.18
135 136 4.504858 GGAATTTGGTATGTGAGAGACGT 58.495 43.478 0.00 0.00 0.00 4.34
136 137 4.330074 GGAATTTGGTATGTGAGAGACGTG 59.670 45.833 0.00 0.00 0.00 4.49
137 138 3.313012 TTTGGTATGTGAGAGACGTGG 57.687 47.619 0.00 0.00 0.00 4.94
138 139 1.919240 TGGTATGTGAGAGACGTGGT 58.081 50.000 0.00 0.00 0.00 4.16
139 140 1.816835 TGGTATGTGAGAGACGTGGTC 59.183 52.381 0.00 0.00 0.00 4.02
140 141 2.093106 GGTATGTGAGAGACGTGGTCT 58.907 52.381 0.00 0.00 46.42 3.85
141 142 3.276857 GGTATGTGAGAGACGTGGTCTA 58.723 50.000 0.00 0.00 43.53 2.59
142 143 3.884091 GGTATGTGAGAGACGTGGTCTAT 59.116 47.826 0.00 0.00 43.53 1.98
143 144 5.061853 GGTATGTGAGAGACGTGGTCTATA 58.938 45.833 0.00 0.00 43.53 1.31
144 145 5.530171 GGTATGTGAGAGACGTGGTCTATAA 59.470 44.000 0.00 0.00 43.53 0.98
145 146 6.207025 GGTATGTGAGAGACGTGGTCTATAAT 59.793 42.308 0.00 0.00 43.53 1.28
146 147 6.716934 ATGTGAGAGACGTGGTCTATAATT 57.283 37.500 0.00 0.00 43.53 1.40
147 148 7.818997 ATGTGAGAGACGTGGTCTATAATTA 57.181 36.000 0.00 0.00 43.53 1.40
148 149 7.260558 TGTGAGAGACGTGGTCTATAATTAG 57.739 40.000 0.00 0.00 43.53 1.73
149 150 6.144175 GTGAGAGACGTGGTCTATAATTAGC 58.856 44.000 0.00 0.00 43.53 3.09
150 151 5.241064 TGAGAGACGTGGTCTATAATTAGCC 59.759 44.000 0.00 0.00 43.53 3.93
151 152 4.523558 AGAGACGTGGTCTATAATTAGCCC 59.476 45.833 0.00 0.00 43.53 5.19
152 153 3.255149 AGACGTGGTCTATAATTAGCCCG 59.745 47.826 0.00 1.01 41.51 6.13
153 154 2.961062 ACGTGGTCTATAATTAGCCCGT 59.039 45.455 0.00 1.53 31.80 5.28
154 155 4.144297 ACGTGGTCTATAATTAGCCCGTA 58.856 43.478 0.00 0.00 33.08 4.02
155 156 4.217118 ACGTGGTCTATAATTAGCCCGTAG 59.783 45.833 0.00 0.00 33.08 3.51
156 157 4.217118 CGTGGTCTATAATTAGCCCGTAGT 59.783 45.833 0.00 0.00 0.00 2.73
157 158 5.412594 CGTGGTCTATAATTAGCCCGTAGTA 59.587 44.000 0.00 0.00 0.00 1.82
158 159 6.072508 CGTGGTCTATAATTAGCCCGTAGTAA 60.073 42.308 0.00 0.00 0.00 2.24
159 160 7.522073 CGTGGTCTATAATTAGCCCGTAGTAAA 60.522 40.741 0.00 0.00 0.00 2.01
160 161 7.596621 GTGGTCTATAATTAGCCCGTAGTAAAC 59.403 40.741 0.00 0.00 0.00 2.01
161 162 7.093354 GGTCTATAATTAGCCCGTAGTAAACC 58.907 42.308 0.00 0.00 0.00 3.27
162 163 7.093354 GTCTATAATTAGCCCGTAGTAAACCC 58.907 42.308 0.00 0.00 0.00 4.11
163 164 2.896745 ATTAGCCCGTAGTAAACCCG 57.103 50.000 0.00 0.00 0.00 5.28
164 165 0.175531 TTAGCCCGTAGTAAACCCGC 59.824 55.000 0.00 0.00 0.00 6.13
165 166 0.684153 TAGCCCGTAGTAAACCCGCT 60.684 55.000 0.00 0.00 34.32 5.52
166 167 1.812507 GCCCGTAGTAAACCCGCTG 60.813 63.158 0.00 0.00 0.00 5.18
167 168 1.153509 CCCGTAGTAAACCCGCTGG 60.154 63.158 0.00 0.00 37.80 4.85
185 186 4.525912 CTGGTTTAGCATTTTTGGCTCT 57.474 40.909 0.00 0.00 42.62 4.09
186 187 4.240096 CTGGTTTAGCATTTTTGGCTCTG 58.760 43.478 0.00 0.00 42.62 3.35
187 188 2.995939 GGTTTAGCATTTTTGGCTCTGC 59.004 45.455 0.00 0.00 42.62 4.26
188 189 3.554752 GGTTTAGCATTTTTGGCTCTGCA 60.555 43.478 0.00 0.00 42.62 4.41
189 190 3.581024 TTAGCATTTTTGGCTCTGCAG 57.419 42.857 7.63 7.63 42.62 4.41
190 191 0.606604 AGCATTTTTGGCTCTGCAGG 59.393 50.000 15.13 5.82 36.81 4.85
191 192 0.604578 GCATTTTTGGCTCTGCAGGA 59.395 50.000 15.13 0.00 34.77 3.86
192 193 1.001181 GCATTTTTGGCTCTGCAGGAA 59.999 47.619 15.13 0.00 34.77 3.36
193 194 2.929592 GCATTTTTGGCTCTGCAGGAAG 60.930 50.000 15.13 5.91 34.77 3.46
194 195 2.071778 TTTTTGGCTCTGCAGGAAGT 57.928 45.000 15.13 0.00 0.00 3.01
195 196 2.949177 TTTTGGCTCTGCAGGAAGTA 57.051 45.000 15.13 0.00 0.00 2.24
196 197 2.949177 TTTGGCTCTGCAGGAAGTAA 57.051 45.000 15.13 2.41 0.00 2.24
197 198 2.185004 TTGGCTCTGCAGGAAGTAAC 57.815 50.000 15.13 0.97 0.00 2.50
198 199 1.055849 TGGCTCTGCAGGAAGTAACA 58.944 50.000 15.13 3.53 0.00 2.41
199 200 1.630369 TGGCTCTGCAGGAAGTAACAT 59.370 47.619 15.13 0.00 0.00 2.71
200 201 2.284190 GGCTCTGCAGGAAGTAACATC 58.716 52.381 15.13 0.00 0.00 3.06
201 202 2.093235 GGCTCTGCAGGAAGTAACATCT 60.093 50.000 15.13 0.00 0.00 2.90
202 203 3.133003 GGCTCTGCAGGAAGTAACATCTA 59.867 47.826 15.13 0.00 0.00 1.98
203 204 4.383118 GGCTCTGCAGGAAGTAACATCTAA 60.383 45.833 15.13 0.00 0.00 2.10
204 205 5.178797 GCTCTGCAGGAAGTAACATCTAAA 58.821 41.667 15.13 0.00 0.00 1.85
205 206 5.819901 GCTCTGCAGGAAGTAACATCTAAAT 59.180 40.000 15.13 0.00 0.00 1.40
206 207 6.317391 GCTCTGCAGGAAGTAACATCTAAATT 59.683 38.462 15.13 0.00 0.00 1.82
207 208 7.466590 GCTCTGCAGGAAGTAACATCTAAATTC 60.467 40.741 15.13 0.00 0.00 2.17
208 209 7.624549 TCTGCAGGAAGTAACATCTAAATTCT 58.375 34.615 15.13 0.00 0.00 2.40
209 210 7.766278 TCTGCAGGAAGTAACATCTAAATTCTC 59.234 37.037 15.13 0.00 0.00 2.87
210 211 6.823689 TGCAGGAAGTAACATCTAAATTCTCC 59.176 38.462 0.00 0.00 0.00 3.71
211 212 6.823689 GCAGGAAGTAACATCTAAATTCTCCA 59.176 38.462 0.00 0.00 0.00 3.86
212 213 7.201652 GCAGGAAGTAACATCTAAATTCTCCAC 60.202 40.741 0.00 0.00 0.00 4.02
213 214 7.824289 CAGGAAGTAACATCTAAATTCTCCACA 59.176 37.037 0.00 0.00 0.00 4.17
214 215 7.824779 AGGAAGTAACATCTAAATTCTCCACAC 59.175 37.037 0.00 0.00 0.00 3.82
215 216 7.824779 GGAAGTAACATCTAAATTCTCCACACT 59.175 37.037 0.00 0.00 0.00 3.55
216 217 9.220767 GAAGTAACATCTAAATTCTCCACACTT 57.779 33.333 0.00 0.00 0.00 3.16
217 218 8.779354 AGTAACATCTAAATTCTCCACACTTC 57.221 34.615 0.00 0.00 0.00 3.01
218 219 7.824779 AGTAACATCTAAATTCTCCACACTTCC 59.175 37.037 0.00 0.00 0.00 3.46
219 220 6.126863 ACATCTAAATTCTCCACACTTCCA 57.873 37.500 0.00 0.00 0.00 3.53
220 221 5.940470 ACATCTAAATTCTCCACACTTCCAC 59.060 40.000 0.00 0.00 0.00 4.02
221 222 4.906618 TCTAAATTCTCCACACTTCCACC 58.093 43.478 0.00 0.00 0.00 4.61
222 223 2.586648 AATTCTCCACACTTCCACCC 57.413 50.000 0.00 0.00 0.00 4.61
223 224 0.324943 ATTCTCCACACTTCCACCCG 59.675 55.000 0.00 0.00 0.00 5.28
224 225 2.358737 CTCCACACTTCCACCCGC 60.359 66.667 0.00 0.00 0.00 6.13
225 226 2.847234 TCCACACTTCCACCCGCT 60.847 61.111 0.00 0.00 0.00 5.52
226 227 2.358737 CCACACTTCCACCCGCTC 60.359 66.667 0.00 0.00 0.00 5.03
227 228 2.425592 CACACTTCCACCCGCTCA 59.574 61.111 0.00 0.00 0.00 4.26
228 229 1.669115 CACACTTCCACCCGCTCAG 60.669 63.158 0.00 0.00 0.00 3.35
229 230 1.837051 ACACTTCCACCCGCTCAGA 60.837 57.895 0.00 0.00 0.00 3.27
230 231 1.079543 CACTTCCACCCGCTCAGAG 60.080 63.158 0.00 0.00 0.00 3.35
231 232 2.125350 CTTCCACCCGCTCAGAGC 60.125 66.667 12.94 12.94 38.02 4.09
232 233 2.922503 TTCCACCCGCTCAGAGCA 60.923 61.111 22.49 0.00 42.58 4.26
233 234 2.454832 CTTCCACCCGCTCAGAGCAA 62.455 60.000 22.49 6.81 42.58 3.91
234 235 2.435586 CCACCCGCTCAGAGCAAG 60.436 66.667 22.49 14.39 42.58 4.01
235 236 2.345244 CACCCGCTCAGAGCAAGT 59.655 61.111 22.49 15.04 42.58 3.16
236 237 1.591703 CACCCGCTCAGAGCAAGTA 59.408 57.895 22.49 0.00 42.58 2.24
237 238 0.176680 CACCCGCTCAGAGCAAGTAT 59.823 55.000 22.49 0.00 42.58 2.12
238 239 1.409064 CACCCGCTCAGAGCAAGTATA 59.591 52.381 22.49 0.00 42.58 1.47
239 240 2.036475 CACCCGCTCAGAGCAAGTATAT 59.964 50.000 22.49 0.00 42.58 0.86
240 241 2.700897 ACCCGCTCAGAGCAAGTATATT 59.299 45.455 22.49 0.00 42.58 1.28
241 242 3.895656 ACCCGCTCAGAGCAAGTATATTA 59.104 43.478 22.49 0.00 42.58 0.98
242 243 4.021894 ACCCGCTCAGAGCAAGTATATTAG 60.022 45.833 22.49 1.63 42.58 1.73
243 244 4.489810 CCGCTCAGAGCAAGTATATTAGG 58.510 47.826 22.49 7.20 42.58 2.69
244 245 4.489810 CGCTCAGAGCAAGTATATTAGGG 58.510 47.826 22.49 0.00 42.58 3.53
245 246 4.021894 CGCTCAGAGCAAGTATATTAGGGT 60.022 45.833 22.49 0.00 42.58 4.34
246 247 5.233988 GCTCAGAGCAAGTATATTAGGGTG 58.766 45.833 18.17 0.00 41.89 4.61
247 248 5.011125 GCTCAGAGCAAGTATATTAGGGTGA 59.989 44.000 18.17 0.00 41.89 4.02
248 249 6.406692 TCAGAGCAAGTATATTAGGGTGAC 57.593 41.667 0.00 0.00 0.00 3.67
249 250 6.136857 TCAGAGCAAGTATATTAGGGTGACT 58.863 40.000 0.00 0.00 0.00 3.41
250 251 7.295340 TCAGAGCAAGTATATTAGGGTGACTA 58.705 38.462 0.00 0.00 0.00 2.59
251 252 7.783119 TCAGAGCAAGTATATTAGGGTGACTAA 59.217 37.037 0.00 0.00 45.24 2.24
252 253 8.085296 CAGAGCAAGTATATTAGGGTGACTAAG 58.915 40.741 0.00 0.00 44.43 2.18
253 254 6.760291 AGCAAGTATATTAGGGTGACTAAGC 58.240 40.000 0.00 0.00 44.43 3.09
254 255 6.326583 AGCAAGTATATTAGGGTGACTAAGCA 59.673 38.462 0.00 0.00 44.43 3.91
255 256 6.647067 GCAAGTATATTAGGGTGACTAAGCAG 59.353 42.308 0.00 0.00 44.43 4.24
256 257 6.919775 AGTATATTAGGGTGACTAAGCAGG 57.080 41.667 0.00 0.00 44.43 4.85
257 258 4.625607 ATATTAGGGTGACTAAGCAGGC 57.374 45.455 0.00 0.00 44.43 4.85
258 259 1.952621 TTAGGGTGACTAAGCAGGCT 58.047 50.000 0.00 0.00 36.76 4.58
259 260 2.840640 TAGGGTGACTAAGCAGGCTA 57.159 50.000 0.00 0.00 0.00 3.93
260 261 2.182516 AGGGTGACTAAGCAGGCTAT 57.817 50.000 0.00 0.00 0.00 2.97
261 262 3.330126 AGGGTGACTAAGCAGGCTATA 57.670 47.619 0.00 0.00 0.00 1.31
262 263 3.863086 AGGGTGACTAAGCAGGCTATAT 58.137 45.455 0.00 0.00 0.00 0.86
263 264 3.580458 AGGGTGACTAAGCAGGCTATATG 59.420 47.826 0.00 0.00 0.00 1.78
264 265 3.578716 GGGTGACTAAGCAGGCTATATGA 59.421 47.826 0.00 0.00 0.00 2.15
265 266 4.322349 GGGTGACTAAGCAGGCTATATGAG 60.322 50.000 0.00 0.00 0.00 2.90
266 267 4.282195 GGTGACTAAGCAGGCTATATGAGT 59.718 45.833 0.00 0.00 0.00 3.41
267 268 5.221541 GGTGACTAAGCAGGCTATATGAGTT 60.222 44.000 0.00 0.00 0.00 3.01
268 269 5.694006 GTGACTAAGCAGGCTATATGAGTTG 59.306 44.000 0.00 0.00 0.00 3.16
269 270 4.636249 ACTAAGCAGGCTATATGAGTTGC 58.364 43.478 0.00 0.00 37.84 4.17
270 271 2.557920 AGCAGGCTATATGAGTTGCC 57.442 50.000 0.00 0.00 45.21 4.52
276 277 3.808728 GGCTATATGAGTTGCCACTTCA 58.191 45.455 0.00 0.00 44.34 3.02
277 278 3.812053 GGCTATATGAGTTGCCACTTCAG 59.188 47.826 0.00 0.00 44.34 3.02
278 279 4.443457 GGCTATATGAGTTGCCACTTCAGA 60.443 45.833 0.00 0.00 44.34 3.27
279 280 5.303971 GCTATATGAGTTGCCACTTCAGAT 58.696 41.667 0.00 0.00 31.22 2.90
280 281 5.762218 GCTATATGAGTTGCCACTTCAGATT 59.238 40.000 0.00 0.00 31.22 2.40
281 282 6.261826 GCTATATGAGTTGCCACTTCAGATTT 59.738 38.462 0.00 0.00 31.22 2.17
282 283 4.778534 ATGAGTTGCCACTTCAGATTTG 57.221 40.909 0.00 0.00 31.22 2.32
283 284 3.554934 TGAGTTGCCACTTCAGATTTGT 58.445 40.909 0.00 0.00 31.22 2.83
284 285 3.316029 TGAGTTGCCACTTCAGATTTGTG 59.684 43.478 0.00 0.00 31.22 3.33
285 286 3.554934 AGTTGCCACTTCAGATTTGTGA 58.445 40.909 0.00 0.00 33.95 3.58
286 287 4.147321 AGTTGCCACTTCAGATTTGTGAT 58.853 39.130 0.00 0.00 33.95 3.06
287 288 4.022589 AGTTGCCACTTCAGATTTGTGATG 60.023 41.667 0.00 0.00 33.95 3.07
288 289 3.753815 TGCCACTTCAGATTTGTGATGA 58.246 40.909 0.00 0.00 33.95 2.92
289 290 4.338012 TGCCACTTCAGATTTGTGATGAT 58.662 39.130 0.00 0.00 33.95 2.45
290 291 4.157105 TGCCACTTCAGATTTGTGATGATG 59.843 41.667 0.00 0.00 33.95 3.07
291 292 4.157289 GCCACTTCAGATTTGTGATGATGT 59.843 41.667 0.00 0.00 33.17 3.06
292 293 5.637809 CCACTTCAGATTTGTGATGATGTG 58.362 41.667 11.39 11.39 43.41 3.21
293 294 5.637809 CACTTCAGATTTGTGATGATGTGG 58.362 41.667 10.79 0.00 41.64 4.17
294 295 5.413523 CACTTCAGATTTGTGATGATGTGGA 59.586 40.000 10.79 0.00 41.64 4.02
295 296 5.646793 ACTTCAGATTTGTGATGATGTGGAG 59.353 40.000 0.00 0.00 32.14 3.86
296 297 4.520179 TCAGATTTGTGATGATGTGGAGG 58.480 43.478 0.00 0.00 0.00 4.30
297 298 4.225717 TCAGATTTGTGATGATGTGGAGGA 59.774 41.667 0.00 0.00 0.00 3.71
298 299 4.575236 CAGATTTGTGATGATGTGGAGGAG 59.425 45.833 0.00 0.00 0.00 3.69
299 300 4.472470 AGATTTGTGATGATGTGGAGGAGA 59.528 41.667 0.00 0.00 0.00 3.71
300 301 3.900966 TTGTGATGATGTGGAGGAGAG 57.099 47.619 0.00 0.00 0.00 3.20
301 302 2.113807 TGTGATGATGTGGAGGAGAGG 58.886 52.381 0.00 0.00 0.00 3.69
302 303 2.292455 TGTGATGATGTGGAGGAGAGGA 60.292 50.000 0.00 0.00 0.00 3.71
303 304 2.364970 GTGATGATGTGGAGGAGAGGAG 59.635 54.545 0.00 0.00 0.00 3.69
304 305 2.245806 TGATGATGTGGAGGAGAGGAGA 59.754 50.000 0.00 0.00 0.00 3.71
305 306 2.450867 TGATGTGGAGGAGAGGAGAG 57.549 55.000 0.00 0.00 0.00 3.20
306 307 1.925959 TGATGTGGAGGAGAGGAGAGA 59.074 52.381 0.00 0.00 0.00 3.10
307 308 2.091939 TGATGTGGAGGAGAGGAGAGAG 60.092 54.545 0.00 0.00 0.00 3.20
308 309 1.675007 TGTGGAGGAGAGGAGAGAGA 58.325 55.000 0.00 0.00 0.00 3.10
309 310 1.996291 TGTGGAGGAGAGGAGAGAGAA 59.004 52.381 0.00 0.00 0.00 2.87
310 311 2.025416 TGTGGAGGAGAGGAGAGAGAAG 60.025 54.545 0.00 0.00 0.00 2.85
311 312 2.241176 GTGGAGGAGAGGAGAGAGAAGA 59.759 54.545 0.00 0.00 0.00 2.87
312 313 3.117512 GTGGAGGAGAGGAGAGAGAAGAT 60.118 52.174 0.00 0.00 0.00 2.40
313 314 3.117550 TGGAGGAGAGGAGAGAGAAGATG 60.118 52.174 0.00 0.00 0.00 2.90
314 315 3.138283 GGAGGAGAGGAGAGAGAAGATGA 59.862 52.174 0.00 0.00 0.00 2.92
315 316 4.392940 GAGGAGAGGAGAGAGAAGATGAG 58.607 52.174 0.00 0.00 0.00 2.90
316 317 3.788142 AGGAGAGGAGAGAGAAGATGAGT 59.212 47.826 0.00 0.00 0.00 3.41
317 318 3.885297 GGAGAGGAGAGAGAAGATGAGTG 59.115 52.174 0.00 0.00 0.00 3.51
318 319 3.885297 GAGAGGAGAGAGAAGATGAGTGG 59.115 52.174 0.00 0.00 0.00 4.00
319 320 2.958355 GAGGAGAGAGAAGATGAGTGGG 59.042 54.545 0.00 0.00 0.00 4.61
320 321 2.314549 AGGAGAGAGAAGATGAGTGGGT 59.685 50.000 0.00 0.00 0.00 4.51
321 322 3.103742 GGAGAGAGAAGATGAGTGGGTT 58.896 50.000 0.00 0.00 0.00 4.11
322 323 3.118811 GGAGAGAGAAGATGAGTGGGTTG 60.119 52.174 0.00 0.00 0.00 3.77
323 324 3.513515 GAGAGAGAAGATGAGTGGGTTGT 59.486 47.826 0.00 0.00 0.00 3.32
324 325 4.678256 AGAGAGAAGATGAGTGGGTTGTA 58.322 43.478 0.00 0.00 0.00 2.41
325 326 5.087323 AGAGAGAAGATGAGTGGGTTGTAA 58.913 41.667 0.00 0.00 0.00 2.41
326 327 5.544176 AGAGAGAAGATGAGTGGGTTGTAAA 59.456 40.000 0.00 0.00 0.00 2.01
341 342 4.773510 GTTGTAAACTTGTAGTCAGCTGC 58.226 43.478 9.47 4.26 45.32 5.25
342 343 4.066646 TGTAAACTTGTAGTCAGCTGCA 57.933 40.909 9.47 0.00 35.56 4.41
343 344 4.058124 TGTAAACTTGTAGTCAGCTGCAG 58.942 43.478 10.11 10.11 38.52 4.41
344 345 1.517242 AACTTGTAGTCAGCTGCAGC 58.483 50.000 31.53 31.53 38.52 5.25
345 346 0.394192 ACTTGTAGTCAGCTGCAGCA 59.606 50.000 38.24 18.36 45.16 4.41
346 347 0.795085 CTTGTAGTCAGCTGCAGCAC 59.205 55.000 38.24 28.18 45.16 4.40
347 348 0.945743 TTGTAGTCAGCTGCAGCACG 60.946 55.000 38.24 28.24 45.16 5.34
348 349 1.080501 GTAGTCAGCTGCAGCACGA 60.081 57.895 38.24 29.95 45.16 4.35
349 350 1.075425 GTAGTCAGCTGCAGCACGAG 61.075 60.000 38.24 24.32 45.16 4.18
350 351 2.825726 TAGTCAGCTGCAGCACGAGC 62.826 60.000 38.24 24.75 45.16 5.03
367 368 2.827604 GCTCTAGCGCACTTTGTGA 58.172 52.632 11.47 0.00 35.23 3.58
368 369 0.718343 GCTCTAGCGCACTTTGTGAG 59.282 55.000 11.47 7.01 35.23 3.51
369 370 1.670087 GCTCTAGCGCACTTTGTGAGA 60.670 52.381 11.47 0.00 35.44 3.27
370 371 2.257894 CTCTAGCGCACTTTGTGAGAG 58.742 52.381 11.47 4.34 35.44 3.20
371 372 1.067565 TCTAGCGCACTTTGTGAGAGG 60.068 52.381 11.47 0.00 35.44 3.69
372 373 0.966179 TAGCGCACTTTGTGAGAGGA 59.034 50.000 11.47 0.00 35.44 3.71
373 374 0.320247 AGCGCACTTTGTGAGAGGAG 60.320 55.000 11.47 0.00 35.44 3.69
374 375 0.319900 GCGCACTTTGTGAGAGGAGA 60.320 55.000 0.30 0.00 35.44 3.71
375 376 1.873903 GCGCACTTTGTGAGAGGAGAA 60.874 52.381 0.30 0.00 35.44 2.87
376 377 2.064762 CGCACTTTGTGAGAGGAGAAG 58.935 52.381 1.52 0.00 35.44 2.85
377 378 2.421619 GCACTTTGTGAGAGGAGAAGG 58.578 52.381 1.52 0.00 35.23 3.46
378 379 2.224402 GCACTTTGTGAGAGGAGAAGGT 60.224 50.000 1.52 0.00 35.23 3.50
379 380 3.397482 CACTTTGTGAGAGGAGAAGGTG 58.603 50.000 0.00 0.00 35.23 4.00
380 381 2.370189 ACTTTGTGAGAGGAGAAGGTGG 59.630 50.000 0.00 0.00 0.00 4.61
381 382 1.352083 TTGTGAGAGGAGAAGGTGGG 58.648 55.000 0.00 0.00 0.00 4.61
382 383 0.545309 TGTGAGAGGAGAAGGTGGGG 60.545 60.000 0.00 0.00 0.00 4.96
383 384 0.545548 GTGAGAGGAGAAGGTGGGGT 60.546 60.000 0.00 0.00 0.00 4.95
384 385 0.252284 TGAGAGGAGAAGGTGGGGTC 60.252 60.000 0.00 0.00 0.00 4.46
385 386 0.041982 GAGAGGAGAAGGTGGGGTCT 59.958 60.000 0.00 0.00 0.00 3.85
386 387 1.288335 GAGAGGAGAAGGTGGGGTCTA 59.712 57.143 0.00 0.00 0.00 2.59
387 388 1.722851 AGAGGAGAAGGTGGGGTCTAA 59.277 52.381 0.00 0.00 0.00 2.10
388 389 2.112190 GAGGAGAAGGTGGGGTCTAAG 58.888 57.143 0.00 0.00 0.00 2.18
389 390 1.205055 GGAGAAGGTGGGGTCTAAGG 58.795 60.000 0.00 0.00 0.00 2.69
390 391 0.542333 GAGAAGGTGGGGTCTAAGGC 59.458 60.000 0.00 0.00 0.00 4.35
391 392 0.119358 AGAAGGTGGGGTCTAAGGCT 59.881 55.000 0.00 0.00 0.00 4.58
392 393 1.365028 AGAAGGTGGGGTCTAAGGCTA 59.635 52.381 0.00 0.00 0.00 3.93
393 394 2.021936 AGAAGGTGGGGTCTAAGGCTAT 60.022 50.000 0.00 0.00 0.00 2.97
394 395 3.209152 AGAAGGTGGGGTCTAAGGCTATA 59.791 47.826 0.00 0.00 0.00 1.31
395 396 3.261818 AGGTGGGGTCTAAGGCTATAG 57.738 52.381 0.00 0.00 0.00 1.31
396 397 2.795960 AGGTGGGGTCTAAGGCTATAGA 59.204 50.000 3.21 0.00 0.00 1.98
397 398 3.406498 AGGTGGGGTCTAAGGCTATAGAT 59.594 47.826 3.21 0.00 34.59 1.98
398 399 3.515901 GGTGGGGTCTAAGGCTATAGATG 59.484 52.174 3.21 0.00 34.59 2.90
399 400 4.161102 GTGGGGTCTAAGGCTATAGATGT 58.839 47.826 3.21 0.00 34.59 3.06
400 401 4.021016 GTGGGGTCTAAGGCTATAGATGTG 60.021 50.000 3.21 0.00 34.59 3.21
401 402 3.515901 GGGGTCTAAGGCTATAGATGTGG 59.484 52.174 3.21 0.00 34.59 4.17
402 403 3.055747 GGGTCTAAGGCTATAGATGTGGC 60.056 52.174 3.21 0.00 34.59 5.01
403 404 3.578716 GGTCTAAGGCTATAGATGTGGCA 59.421 47.826 3.21 0.00 34.59 4.92
404 405 4.561105 GTCTAAGGCTATAGATGTGGCAC 58.439 47.826 11.55 11.55 34.59 5.01
405 406 4.039245 GTCTAAGGCTATAGATGTGGCACA 59.961 45.833 24.36 24.36 34.59 4.57
406 407 3.931907 AAGGCTATAGATGTGGCACAA 57.068 42.857 25.95 8.91 44.16 3.33
407 408 3.931907 AGGCTATAGATGTGGCACAAA 57.068 42.857 25.95 13.53 44.16 2.83
408 409 3.813443 AGGCTATAGATGTGGCACAAAG 58.187 45.455 25.95 16.64 44.16 2.77
409 410 3.455910 AGGCTATAGATGTGGCACAAAGA 59.544 43.478 25.95 12.60 44.16 2.52
410 411 4.103785 AGGCTATAGATGTGGCACAAAGAT 59.896 41.667 25.95 18.51 44.16 2.40
411 412 5.307976 AGGCTATAGATGTGGCACAAAGATA 59.692 40.000 25.95 18.63 44.16 1.98
412 413 5.641209 GGCTATAGATGTGGCACAAAGATAG 59.359 44.000 25.95 26.01 44.16 2.08
413 414 5.121454 GCTATAGATGTGGCACAAAGATAGC 59.879 44.000 32.25 32.25 44.16 2.97
414 415 3.354948 AGATGTGGCACAAAGATAGCA 57.645 42.857 25.95 0.00 44.16 3.49
415 416 3.689347 AGATGTGGCACAAAGATAGCAA 58.311 40.909 25.95 0.00 44.16 3.91
416 417 3.441572 AGATGTGGCACAAAGATAGCAAC 59.558 43.478 25.95 6.12 44.16 4.17
417 418 1.885887 TGTGGCACAAAGATAGCAACC 59.114 47.619 19.74 0.00 44.16 3.77
418 419 1.135689 GTGGCACAAAGATAGCAACCG 60.136 52.381 13.86 0.00 44.16 4.44
419 420 0.451783 GGCACAAAGATAGCAACCGG 59.548 55.000 0.00 0.00 0.00 5.28
420 421 0.451783 GCACAAAGATAGCAACCGGG 59.548 55.000 6.32 0.00 0.00 5.73
421 422 1.094785 CACAAAGATAGCAACCGGGG 58.905 55.000 6.32 0.00 0.00 5.73
422 423 0.988832 ACAAAGATAGCAACCGGGGA 59.011 50.000 6.32 0.00 0.00 4.81
423 424 1.339727 ACAAAGATAGCAACCGGGGAC 60.340 52.381 6.32 0.00 0.00 4.46
435 436 4.058797 GGGGACGTGAACTTGGTG 57.941 61.111 0.00 0.00 0.00 4.17
436 437 2.258726 GGGGACGTGAACTTGGTGC 61.259 63.158 0.00 0.00 0.00 5.01
437 438 1.227853 GGGACGTGAACTTGGTGCT 60.228 57.895 0.00 0.00 0.00 4.40
438 439 1.228657 GGGACGTGAACTTGGTGCTC 61.229 60.000 0.00 0.00 0.00 4.26
439 440 0.249911 GGACGTGAACTTGGTGCTCT 60.250 55.000 0.00 0.00 0.00 4.09
440 441 1.583054 GACGTGAACTTGGTGCTCTT 58.417 50.000 0.00 0.00 0.00 2.85
441 442 1.261619 GACGTGAACTTGGTGCTCTTG 59.738 52.381 0.00 0.00 0.00 3.02
442 443 0.588252 CGTGAACTTGGTGCTCTTGG 59.412 55.000 0.00 0.00 0.00 3.61
443 444 0.954452 GTGAACTTGGTGCTCTTGGG 59.046 55.000 0.00 0.00 0.00 4.12
444 445 0.550914 TGAACTTGGTGCTCTTGGGT 59.449 50.000 0.00 0.00 0.00 4.51
445 446 0.954452 GAACTTGGTGCTCTTGGGTG 59.046 55.000 0.00 0.00 0.00 4.61
446 447 1.109323 AACTTGGTGCTCTTGGGTGC 61.109 55.000 0.00 0.00 0.00 5.01
447 448 1.228367 CTTGGTGCTCTTGGGTGCT 60.228 57.895 0.00 0.00 33.63 4.40
448 449 0.036732 CTTGGTGCTCTTGGGTGCTA 59.963 55.000 0.00 0.00 33.63 3.49
449 450 0.036732 TTGGTGCTCTTGGGTGCTAG 59.963 55.000 0.00 0.00 33.63 3.42
450 451 1.746991 GGTGCTCTTGGGTGCTAGC 60.747 63.158 8.10 8.10 35.51 3.42
451 452 2.103042 GTGCTCTTGGGTGCTAGCG 61.103 63.158 10.77 0.00 37.80 4.26
452 453 3.198489 GCTCTTGGGTGCTAGCGC 61.198 66.667 20.17 20.17 0.00 5.92
453 454 2.265739 CTCTTGGGTGCTAGCGCA 59.734 61.111 28.28 7.43 45.60 6.09
461 462 3.628989 TGCTAGCGCACCCTATGT 58.371 55.556 11.47 0.00 42.25 2.29
462 463 2.815384 TGCTAGCGCACCCTATGTA 58.185 52.632 11.47 0.00 42.25 2.29
463 464 0.387929 TGCTAGCGCACCCTATGTAC 59.612 55.000 11.47 0.00 42.25 2.90
464 465 0.387929 GCTAGCGCACCCTATGTACA 59.612 55.000 11.47 0.00 35.78 2.90
465 466 1.868519 GCTAGCGCACCCTATGTACAC 60.869 57.143 11.47 0.00 35.78 2.90
466 467 0.748450 TAGCGCACCCTATGTACACC 59.252 55.000 11.47 0.00 0.00 4.16
467 468 1.219664 GCGCACCCTATGTACACCA 59.780 57.895 0.30 0.00 0.00 4.17
468 469 0.391927 GCGCACCCTATGTACACCAA 60.392 55.000 0.30 0.00 0.00 3.67
469 470 1.946747 GCGCACCCTATGTACACCAAA 60.947 52.381 0.30 0.00 0.00 3.28
470 471 2.639065 CGCACCCTATGTACACCAAAT 58.361 47.619 0.00 0.00 0.00 2.32
471 472 3.799366 CGCACCCTATGTACACCAAATA 58.201 45.455 0.00 0.00 0.00 1.40
472 473 3.807622 CGCACCCTATGTACACCAAATAG 59.192 47.826 0.00 0.00 0.00 1.73
473 474 4.682320 CGCACCCTATGTACACCAAATAGT 60.682 45.833 0.00 0.00 0.00 2.12
474 475 5.190677 GCACCCTATGTACACCAAATAGTT 58.809 41.667 0.00 0.00 0.00 2.24
475 476 5.650703 GCACCCTATGTACACCAAATAGTTT 59.349 40.000 0.00 0.00 0.00 2.66
476 477 6.824704 GCACCCTATGTACACCAAATAGTTTA 59.175 38.462 0.00 0.00 0.00 2.01
477 478 7.012044 GCACCCTATGTACACCAAATAGTTTAG 59.988 40.741 0.00 0.00 0.00 1.85
478 479 8.044908 CACCCTATGTACACCAAATAGTTTAGT 58.955 37.037 0.00 0.00 0.00 2.24
479 480 9.270707 ACCCTATGTACACCAAATAGTTTAGTA 57.729 33.333 0.00 0.00 0.00 1.82
537 538 8.579850 TTTTGAGCCAAATATGATCAAGTACT 57.420 30.769 0.00 0.00 35.16 2.73
538 539 7.792374 TTGAGCCAAATATGATCAAGTACTC 57.208 36.000 0.00 1.78 32.10 2.59
539 540 6.888105 TGAGCCAAATATGATCAAGTACTCA 58.112 36.000 0.00 4.41 0.00 3.41
540 541 7.512130 TGAGCCAAATATGATCAAGTACTCAT 58.488 34.615 0.00 0.00 36.19 2.90
541 542 8.650490 TGAGCCAAATATGATCAAGTACTCATA 58.350 33.333 0.00 0.15 38.39 2.15
542 543 9.664332 GAGCCAAATATGATCAAGTACTCATAT 57.336 33.333 0.00 8.72 43.54 1.78
554 555 8.801882 TCAAGTACTCATATAAAAGGTTTGGG 57.198 34.615 0.00 0.00 0.00 4.12
555 556 7.338449 TCAAGTACTCATATAAAAGGTTTGGGC 59.662 37.037 0.00 0.00 0.00 5.36
556 557 6.727394 AGTACTCATATAAAAGGTTTGGGCA 58.273 36.000 0.00 0.00 0.00 5.36
557 558 7.179269 AGTACTCATATAAAAGGTTTGGGCAA 58.821 34.615 0.00 0.00 0.00 4.52
558 559 6.530019 ACTCATATAAAAGGTTTGGGCAAG 57.470 37.500 0.00 0.00 0.00 4.01
559 560 6.252995 ACTCATATAAAAGGTTTGGGCAAGA 58.747 36.000 0.00 0.00 0.00 3.02
560 561 6.723977 ACTCATATAAAAGGTTTGGGCAAGAA 59.276 34.615 0.00 0.00 0.00 2.52
561 562 7.234577 ACTCATATAAAAGGTTTGGGCAAGAAA 59.765 33.333 0.00 0.00 0.00 2.52
562 563 8.144862 TCATATAAAAGGTTTGGGCAAGAAAT 57.855 30.769 0.00 0.00 0.00 2.17
563 564 8.040132 TCATATAAAAGGTTTGGGCAAGAAATG 58.960 33.333 0.00 0.00 0.00 2.32
564 565 4.769345 AAAAGGTTTGGGCAAGAAATGA 57.231 36.364 0.00 0.00 0.00 2.57
565 566 4.980339 AAAGGTTTGGGCAAGAAATGAT 57.020 36.364 0.00 0.00 0.00 2.45
566 567 4.980339 AAGGTTTGGGCAAGAAATGATT 57.020 36.364 0.00 0.00 0.00 2.57
567 568 4.980339 AGGTTTGGGCAAGAAATGATTT 57.020 36.364 0.00 0.00 0.00 2.17
568 569 4.898320 AGGTTTGGGCAAGAAATGATTTC 58.102 39.130 9.82 9.82 39.96 2.17
583 584 5.859205 ATGATTTCTATTGACTTTGGGGC 57.141 39.130 0.00 0.00 0.00 5.80
584 585 4.671831 TGATTTCTATTGACTTTGGGGCA 58.328 39.130 0.00 0.00 0.00 5.36
593 594 5.878406 TTGACTTTGGGGCAAAAAGATAA 57.122 34.783 15.50 8.54 40.46 1.75
594 595 5.878406 TGACTTTGGGGCAAAAAGATAAA 57.122 34.783 15.50 0.00 37.91 1.40
595 596 5.852827 TGACTTTGGGGCAAAAAGATAAAG 58.147 37.500 15.50 0.00 37.91 1.85
596 597 4.641396 ACTTTGGGGCAAAAAGATAAAGC 58.359 39.130 15.50 0.00 37.91 3.51
597 598 4.347876 ACTTTGGGGCAAAAAGATAAAGCT 59.652 37.500 15.50 0.00 37.91 3.74
598 599 5.542251 ACTTTGGGGCAAAAAGATAAAGCTA 59.458 36.000 15.50 0.00 37.91 3.32
599 600 6.213397 ACTTTGGGGCAAAAAGATAAAGCTAT 59.787 34.615 15.50 0.00 37.91 2.97
600 601 5.596836 TGGGGCAAAAAGATAAAGCTATG 57.403 39.130 0.00 0.00 0.00 2.23
601 602 5.268387 TGGGGCAAAAAGATAAAGCTATGA 58.732 37.500 0.00 0.00 0.00 2.15
602 603 5.127031 TGGGGCAAAAAGATAAAGCTATGAC 59.873 40.000 0.00 0.00 0.00 3.06
603 604 5.273944 GGGCAAAAAGATAAAGCTATGACG 58.726 41.667 0.00 0.00 0.00 4.35
604 605 5.065988 GGGCAAAAAGATAAAGCTATGACGA 59.934 40.000 0.00 0.00 0.00 4.20
605 606 6.238759 GGGCAAAAAGATAAAGCTATGACGAT 60.239 38.462 0.00 0.00 0.00 3.73
606 607 7.041372 GGGCAAAAAGATAAAGCTATGACGATA 60.041 37.037 0.00 0.00 0.00 2.92
607 608 8.342634 GGCAAAAAGATAAAGCTATGACGATAA 58.657 33.333 0.00 0.00 0.00 1.75
608 609 9.884465 GCAAAAAGATAAAGCTATGACGATAAT 57.116 29.630 0.00 0.00 0.00 1.28
650 651 2.851263 TGCGGGGTAGCATAAATAGG 57.149 50.000 0.00 0.00 42.92 2.57
709 714 8.272545 TCAAGGATACAATGAAAGTCATTCTG 57.727 34.615 0.47 0.00 43.03 3.02
711 716 7.621428 AGGATACAATGAAAGTCATTCTGTG 57.379 36.000 0.47 0.00 43.03 3.66
712 717 6.600822 AGGATACAATGAAAGTCATTCTGTGG 59.399 38.462 0.47 0.00 43.03 4.17
751 756 9.740239 ATCATGTTTGATTCCATAAAAGATTCG 57.260 29.630 0.00 0.00 39.64 3.34
752 757 8.190122 TCATGTTTGATTCCATAAAAGATTCGG 58.810 33.333 0.00 0.00 0.00 4.30
843 848 2.474816 GGTGTATTTCTCTAGCAGCGG 58.525 52.381 0.00 0.00 0.00 5.52
864 869 2.383527 GCGAACTTGGTGCTCTCGG 61.384 63.158 0.00 0.00 0.00 4.63
886 892 2.323580 GGAGCAGCTGAGCACACAC 61.324 63.158 20.43 0.00 36.85 3.82
921 1729 2.923035 CACCACCCGGTCTCCAGT 60.923 66.667 0.00 0.00 44.71 4.00
989 1810 1.381327 TTCCTCTCCGCCCGATTCT 60.381 57.895 0.00 0.00 0.00 2.40
1560 2420 1.067821 GACCATGAGGATGAGACGTCC 59.932 57.143 13.01 4.42 38.69 4.79
1748 2611 1.601903 GTCAAGTTTCGACCATGTGCA 59.398 47.619 0.00 0.00 0.00 4.57
1875 2742 1.748122 CAGATGTCTGCCTGGCCAC 60.748 63.158 17.53 13.32 37.15 5.01
1947 2823 1.625818 AGTCTCCCTGGCTTTGTAGTG 59.374 52.381 0.00 0.00 0.00 2.74
1999 2875 2.549064 TGTTGGTGATCACAGTCCAG 57.451 50.000 26.47 0.00 0.00 3.86
2183 3062 2.821969 ACTGTCATGAAACTGAATGGGC 59.178 45.455 0.00 0.00 0.00 5.36
2184 3063 3.087031 CTGTCATGAAACTGAATGGGCT 58.913 45.455 0.00 0.00 0.00 5.19
2280 3171 0.725784 CATGCTTCAACCACGAACGC 60.726 55.000 0.00 0.00 0.00 4.84
2304 3195 1.148498 CCCATACTTCGGCTTCCCC 59.852 63.158 0.00 0.00 0.00 4.81
2432 3323 1.618861 TTTGTTTGTGGTGTTTCGCG 58.381 45.000 0.00 0.00 0.00 5.87
2458 3349 4.394920 CCTAATTGTGCATGTAGGACGTTT 59.605 41.667 8.51 0.00 42.22 3.60
2480 3371 7.486551 CGTTTTTGGTTGATTCTGTTTCTGTTA 59.513 33.333 0.00 0.00 0.00 2.41
2511 3402 5.808366 TGTCAAAGTAGTGAAGATGGTCT 57.192 39.130 0.00 0.00 0.00 3.85
2563 3454 0.034896 AGTGACTGGGCAAGTAACGG 59.965 55.000 3.77 0.00 44.28 4.44
2621 3513 7.599998 CACTAAATTTGCATAACCTGAAAAGCT 59.400 33.333 0.00 0.00 35.79 3.74
2858 5007 5.629079 AAGCTTGATTGTAGTTTACCAGC 57.371 39.130 0.00 0.00 0.00 4.85
2879 5028 8.188139 ACCAGCTTTGATGTTATATAAAAACCG 58.812 33.333 0.00 0.00 0.00 4.44
2956 5105 8.124808 TCATTCATTGGAAATGTTGATTCTCA 57.875 30.769 0.26 0.00 36.43 3.27
2960 5109 9.781633 TTCATTGGAAATGTTGATTCTCAAAAT 57.218 25.926 0.26 0.00 38.22 1.82
3079 5228 0.038744 CCCTGGTGCTCCTGAAACAT 59.961 55.000 12.76 0.00 35.11 2.71
3091 5240 2.753452 CCTGAAACATGAATGAGCAGCT 59.247 45.455 0.00 0.00 0.00 4.24
3093 5242 4.397103 CCTGAAACATGAATGAGCAGCTTA 59.603 41.667 0.00 0.00 0.00 3.09
3121 5275 9.555727 TTATGTGCTGTTTACTCTTTACTTTCT 57.444 29.630 0.00 0.00 0.00 2.52
3227 5381 6.183359 CGGAAACAACTATTTTTATTGCACCG 60.183 38.462 0.00 0.00 33.72 4.94
3233 5387 6.751514 ACTATTTTTATTGCACCGACATCA 57.248 33.333 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.479709 AGCATTACTCTCGTGGAGCT 58.520 50.000 7.78 0.00 45.48 4.09
3 4 3.617284 TCTGTAGCATTACTCTCGTGGA 58.383 45.455 0.00 0.00 0.00 4.02
4 5 4.576216 ATCTGTAGCATTACTCTCGTGG 57.424 45.455 0.00 0.00 0.00 4.94
5 6 6.893958 AAAATCTGTAGCATTACTCTCGTG 57.106 37.500 0.00 0.00 0.00 4.35
6 7 6.691818 CGTAAAATCTGTAGCATTACTCTCGT 59.308 38.462 0.00 0.00 0.00 4.18
7 8 6.142480 CCGTAAAATCTGTAGCATTACTCTCG 59.858 42.308 0.00 0.00 0.00 4.04
8 9 7.167801 GTCCGTAAAATCTGTAGCATTACTCTC 59.832 40.741 0.00 0.00 0.00 3.20
9 10 6.979238 GTCCGTAAAATCTGTAGCATTACTCT 59.021 38.462 0.00 0.00 0.00 3.24
10 11 6.979238 AGTCCGTAAAATCTGTAGCATTACTC 59.021 38.462 0.00 0.00 0.00 2.59
11 12 6.757010 CAGTCCGTAAAATCTGTAGCATTACT 59.243 38.462 0.00 0.00 0.00 2.24
12 13 6.509677 GCAGTCCGTAAAATCTGTAGCATTAC 60.510 42.308 0.00 0.00 0.00 1.89
13 14 5.522460 GCAGTCCGTAAAATCTGTAGCATTA 59.478 40.000 0.00 0.00 0.00 1.90
14 15 4.332819 GCAGTCCGTAAAATCTGTAGCATT 59.667 41.667 0.00 0.00 0.00 3.56
15 16 3.871594 GCAGTCCGTAAAATCTGTAGCAT 59.128 43.478 0.00 0.00 0.00 3.79
16 17 3.259064 GCAGTCCGTAAAATCTGTAGCA 58.741 45.455 0.00 0.00 0.00 3.49
17 18 3.259064 TGCAGTCCGTAAAATCTGTAGC 58.741 45.455 0.00 0.00 0.00 3.58
18 19 4.688879 TGTTGCAGTCCGTAAAATCTGTAG 59.311 41.667 0.00 0.00 0.00 2.74
19 20 4.633175 TGTTGCAGTCCGTAAAATCTGTA 58.367 39.130 0.00 0.00 0.00 2.74
20 21 3.472652 TGTTGCAGTCCGTAAAATCTGT 58.527 40.909 0.00 0.00 0.00 3.41
21 22 4.406069 CATGTTGCAGTCCGTAAAATCTG 58.594 43.478 0.00 0.00 0.00 2.90
22 23 3.440173 CCATGTTGCAGTCCGTAAAATCT 59.560 43.478 0.00 0.00 0.00 2.40
23 24 3.758300 CCATGTTGCAGTCCGTAAAATC 58.242 45.455 0.00 0.00 0.00 2.17
24 25 2.094752 GCCATGTTGCAGTCCGTAAAAT 60.095 45.455 0.00 0.00 0.00 1.82
25 26 1.268352 GCCATGTTGCAGTCCGTAAAA 59.732 47.619 0.00 0.00 0.00 1.52
26 27 0.878416 GCCATGTTGCAGTCCGTAAA 59.122 50.000 0.00 0.00 0.00 2.01
27 28 0.250510 TGCCATGTTGCAGTCCGTAA 60.251 50.000 0.00 0.00 36.04 3.18
28 29 0.250510 TTGCCATGTTGCAGTCCGTA 60.251 50.000 0.00 0.00 43.21 4.02
29 30 0.895100 ATTGCCATGTTGCAGTCCGT 60.895 50.000 0.00 0.00 43.21 4.69
30 31 0.244450 AATTGCCATGTTGCAGTCCG 59.756 50.000 0.00 0.00 43.21 4.79
31 32 2.070783 CAAATTGCCATGTTGCAGTCC 58.929 47.619 0.00 0.00 43.21 3.85
32 33 2.477375 CACAAATTGCCATGTTGCAGTC 59.523 45.455 0.00 0.00 43.21 3.51
33 34 2.485903 CACAAATTGCCATGTTGCAGT 58.514 42.857 0.00 0.00 43.21 4.40
34 35 1.801771 CCACAAATTGCCATGTTGCAG 59.198 47.619 0.00 0.00 43.21 4.41
35 36 1.140452 ACCACAAATTGCCATGTTGCA 59.860 42.857 0.00 0.00 40.07 4.08
36 37 1.881591 ACCACAAATTGCCATGTTGC 58.118 45.000 0.00 0.00 0.00 4.17
37 38 2.548904 CCAACCACAAATTGCCATGTTG 59.451 45.455 0.00 2.21 33.29 3.33
38 39 2.848691 CCAACCACAAATTGCCATGTT 58.151 42.857 0.00 0.00 0.00 2.71
39 40 1.542987 GCCAACCACAAATTGCCATGT 60.543 47.619 0.00 0.00 0.00 3.21
40 41 1.158434 GCCAACCACAAATTGCCATG 58.842 50.000 0.00 0.00 0.00 3.66
41 42 1.058284 AGCCAACCACAAATTGCCAT 58.942 45.000 0.00 0.00 0.00 4.40
42 43 1.709578 TAGCCAACCACAAATTGCCA 58.290 45.000 0.00 0.00 0.00 4.92
43 44 2.233431 TGATAGCCAACCACAAATTGCC 59.767 45.455 0.00 0.00 0.00 4.52
44 45 3.056607 ACTGATAGCCAACCACAAATTGC 60.057 43.478 0.00 0.00 0.00 3.56
45 46 4.789012 ACTGATAGCCAACCACAAATTG 57.211 40.909 0.00 0.00 0.00 2.32
46 47 4.021192 CCAACTGATAGCCAACCACAAATT 60.021 41.667 0.00 0.00 0.00 1.82
47 48 3.511146 CCAACTGATAGCCAACCACAAAT 59.489 43.478 0.00 0.00 0.00 2.32
48 49 2.890311 CCAACTGATAGCCAACCACAAA 59.110 45.455 0.00 0.00 0.00 2.83
49 50 2.513753 CCAACTGATAGCCAACCACAA 58.486 47.619 0.00 0.00 0.00 3.33
50 51 1.271871 CCCAACTGATAGCCAACCACA 60.272 52.381 0.00 0.00 0.00 4.17
51 52 1.463674 CCCAACTGATAGCCAACCAC 58.536 55.000 0.00 0.00 0.00 4.16
52 53 0.331278 CCCCAACTGATAGCCAACCA 59.669 55.000 0.00 0.00 0.00 3.67
53 54 0.623723 TCCCCAACTGATAGCCAACC 59.376 55.000 0.00 0.00 0.00 3.77
54 55 2.290960 ACTTCCCCAACTGATAGCCAAC 60.291 50.000 0.00 0.00 0.00 3.77
55 56 1.992557 ACTTCCCCAACTGATAGCCAA 59.007 47.619 0.00 0.00 0.00 4.52
56 57 1.281867 CACTTCCCCAACTGATAGCCA 59.718 52.381 0.00 0.00 0.00 4.75
57 58 2.019156 GCACTTCCCCAACTGATAGCC 61.019 57.143 0.00 0.00 0.00 3.93
58 59 1.383523 GCACTTCCCCAACTGATAGC 58.616 55.000 0.00 0.00 0.00 2.97
59 60 2.044123 GGCACTTCCCCAACTGATAG 57.956 55.000 0.00 0.00 0.00 2.08
86 87 4.672899 TCCTCTAAATTTCACAAAGGGGG 58.327 43.478 4.35 0.00 0.00 5.40
87 88 4.706962 CCTCCTCTAAATTTCACAAAGGGG 59.293 45.833 0.00 0.00 0.00 4.79
88 89 4.706962 CCCTCCTCTAAATTTCACAAAGGG 59.293 45.833 11.39 11.39 34.23 3.95
89 90 4.706962 CCCCTCCTCTAAATTTCACAAAGG 59.293 45.833 0.00 0.00 0.00 3.11
90 91 4.706962 CCCCCTCCTCTAAATTTCACAAAG 59.293 45.833 0.00 0.00 0.00 2.77
91 92 4.672899 CCCCCTCCTCTAAATTTCACAAA 58.327 43.478 0.00 0.00 0.00 2.83
92 93 4.316025 CCCCCTCCTCTAAATTTCACAA 57.684 45.455 0.00 0.00 0.00 3.33
110 111 3.202151 TCTCTCACATACCAAATTCCCCC 59.798 47.826 0.00 0.00 0.00 5.40
111 112 4.200092 GTCTCTCACATACCAAATTCCCC 58.800 47.826 0.00 0.00 0.00 4.81
112 113 3.871594 CGTCTCTCACATACCAAATTCCC 59.128 47.826 0.00 0.00 0.00 3.97
113 114 4.330074 CACGTCTCTCACATACCAAATTCC 59.670 45.833 0.00 0.00 0.00 3.01
114 115 4.330074 CCACGTCTCTCACATACCAAATTC 59.670 45.833 0.00 0.00 0.00 2.17
115 116 4.253685 CCACGTCTCTCACATACCAAATT 58.746 43.478 0.00 0.00 0.00 1.82
116 117 3.260884 ACCACGTCTCTCACATACCAAAT 59.739 43.478 0.00 0.00 0.00 2.32
117 118 2.631062 ACCACGTCTCTCACATACCAAA 59.369 45.455 0.00 0.00 0.00 3.28
118 119 2.230508 GACCACGTCTCTCACATACCAA 59.769 50.000 0.00 0.00 0.00 3.67
119 120 1.816835 GACCACGTCTCTCACATACCA 59.183 52.381 0.00 0.00 0.00 3.25
120 121 2.093106 AGACCACGTCTCTCACATACC 58.907 52.381 0.00 0.00 38.71 2.73
121 122 6.615264 TTATAGACCACGTCTCTCACATAC 57.385 41.667 0.00 0.00 42.40 2.39
122 123 7.818997 AATTATAGACCACGTCTCTCACATA 57.181 36.000 0.00 0.00 42.40 2.29
123 124 6.716934 AATTATAGACCACGTCTCTCACAT 57.283 37.500 0.00 0.00 42.40 3.21
124 125 6.238676 GCTAATTATAGACCACGTCTCTCACA 60.239 42.308 0.00 0.00 42.40 3.58
125 126 6.144175 GCTAATTATAGACCACGTCTCTCAC 58.856 44.000 0.00 0.00 42.40 3.51
126 127 5.241064 GGCTAATTATAGACCACGTCTCTCA 59.759 44.000 0.00 0.00 42.40 3.27
127 128 5.701855 GGCTAATTATAGACCACGTCTCTC 58.298 45.833 0.00 0.00 42.40 3.20
128 129 5.708877 GGCTAATTATAGACCACGTCTCT 57.291 43.478 0.00 0.00 42.40 3.10
137 138 7.093354 GGGTTTACTACGGGCTAATTATAGAC 58.907 42.308 0.00 0.00 36.32 2.59
138 139 6.071952 CGGGTTTACTACGGGCTAATTATAGA 60.072 42.308 0.00 0.00 0.00 1.98
139 140 6.095377 CGGGTTTACTACGGGCTAATTATAG 58.905 44.000 0.00 0.00 0.00 1.31
140 141 5.566627 GCGGGTTTACTACGGGCTAATTATA 60.567 44.000 0.00 0.00 0.00 0.98
141 142 4.800582 GCGGGTTTACTACGGGCTAATTAT 60.801 45.833 0.00 0.00 0.00 1.28
142 143 3.492482 GCGGGTTTACTACGGGCTAATTA 60.492 47.826 0.00 0.00 0.00 1.40
143 144 2.742856 GCGGGTTTACTACGGGCTAATT 60.743 50.000 0.00 0.00 0.00 1.40
144 145 1.202568 GCGGGTTTACTACGGGCTAAT 60.203 52.381 0.00 0.00 0.00 1.73
145 146 0.175531 GCGGGTTTACTACGGGCTAA 59.824 55.000 0.00 0.00 0.00 3.09
146 147 0.684153 AGCGGGTTTACTACGGGCTA 60.684 55.000 0.00 0.00 35.14 3.93
147 148 1.986210 AGCGGGTTTACTACGGGCT 60.986 57.895 0.00 0.00 32.94 5.19
148 149 1.812507 CAGCGGGTTTACTACGGGC 60.813 63.158 0.00 0.00 0.00 6.13
149 150 1.153509 CCAGCGGGTTTACTACGGG 60.154 63.158 0.00 0.00 0.00 5.28
150 151 4.507879 CCAGCGGGTTTACTACGG 57.492 61.111 0.00 0.00 0.00 4.02
164 165 4.240096 CAGAGCCAAAAATGCTAAACCAG 58.760 43.478 0.00 0.00 39.69 4.00
165 166 3.554752 GCAGAGCCAAAAATGCTAAACCA 60.555 43.478 0.00 0.00 39.69 3.67
166 167 2.995939 GCAGAGCCAAAAATGCTAAACC 59.004 45.455 0.00 0.00 39.69 3.27
167 168 3.652274 TGCAGAGCCAAAAATGCTAAAC 58.348 40.909 0.00 0.00 39.69 2.01
168 169 3.306225 CCTGCAGAGCCAAAAATGCTAAA 60.306 43.478 17.39 0.00 39.69 1.85
169 170 2.231964 CCTGCAGAGCCAAAAATGCTAA 59.768 45.455 17.39 0.00 39.69 3.09
170 171 1.820519 CCTGCAGAGCCAAAAATGCTA 59.179 47.619 17.39 0.00 39.69 3.49
171 172 0.606604 CCTGCAGAGCCAAAAATGCT 59.393 50.000 17.39 0.00 43.03 3.79
172 173 0.604578 TCCTGCAGAGCCAAAAATGC 59.395 50.000 17.39 0.00 39.14 3.56
173 174 2.298163 ACTTCCTGCAGAGCCAAAAATG 59.702 45.455 17.39 0.00 0.00 2.32
174 175 2.601905 ACTTCCTGCAGAGCCAAAAAT 58.398 42.857 17.39 0.00 0.00 1.82
175 176 2.071778 ACTTCCTGCAGAGCCAAAAA 57.928 45.000 17.39 0.00 0.00 1.94
176 177 2.884639 GTTACTTCCTGCAGAGCCAAAA 59.115 45.455 17.39 0.00 0.00 2.44
177 178 2.158682 TGTTACTTCCTGCAGAGCCAAA 60.159 45.455 17.39 0.73 0.00 3.28
178 179 1.419762 TGTTACTTCCTGCAGAGCCAA 59.580 47.619 17.39 0.70 0.00 4.52
179 180 1.055849 TGTTACTTCCTGCAGAGCCA 58.944 50.000 17.39 0.80 0.00 4.75
180 181 2.093235 AGATGTTACTTCCTGCAGAGCC 60.093 50.000 17.39 0.00 0.00 4.70
181 182 3.258971 AGATGTTACTTCCTGCAGAGC 57.741 47.619 17.39 0.00 0.00 4.09
182 183 7.768120 AGAATTTAGATGTTACTTCCTGCAGAG 59.232 37.037 17.39 8.22 0.00 3.35
183 184 7.624549 AGAATTTAGATGTTACTTCCTGCAGA 58.375 34.615 17.39 0.00 0.00 4.26
184 185 7.011857 GGAGAATTTAGATGTTACTTCCTGCAG 59.988 40.741 6.78 6.78 0.00 4.41
185 186 6.823689 GGAGAATTTAGATGTTACTTCCTGCA 59.176 38.462 0.00 0.00 0.00 4.41
186 187 6.823689 TGGAGAATTTAGATGTTACTTCCTGC 59.176 38.462 0.00 0.00 0.00 4.85
187 188 7.824289 TGTGGAGAATTTAGATGTTACTTCCTG 59.176 37.037 0.00 0.00 0.00 3.86
188 189 7.824779 GTGTGGAGAATTTAGATGTTACTTCCT 59.175 37.037 0.00 0.00 0.00 3.36
189 190 7.824779 AGTGTGGAGAATTTAGATGTTACTTCC 59.175 37.037 0.00 0.00 0.00 3.46
190 191 8.779354 AGTGTGGAGAATTTAGATGTTACTTC 57.221 34.615 0.00 0.00 0.00 3.01
191 192 9.220767 GAAGTGTGGAGAATTTAGATGTTACTT 57.779 33.333 0.00 0.00 0.00 2.24
192 193 7.824779 GGAAGTGTGGAGAATTTAGATGTTACT 59.175 37.037 0.00 0.00 0.00 2.24
193 194 7.606456 TGGAAGTGTGGAGAATTTAGATGTTAC 59.394 37.037 0.00 0.00 0.00 2.50
194 195 7.606456 GTGGAAGTGTGGAGAATTTAGATGTTA 59.394 37.037 0.00 0.00 0.00 2.41
195 196 6.431234 GTGGAAGTGTGGAGAATTTAGATGTT 59.569 38.462 0.00 0.00 0.00 2.71
196 197 5.940470 GTGGAAGTGTGGAGAATTTAGATGT 59.060 40.000 0.00 0.00 0.00 3.06
197 198 5.355350 GGTGGAAGTGTGGAGAATTTAGATG 59.645 44.000 0.00 0.00 0.00 2.90
198 199 5.501156 GGTGGAAGTGTGGAGAATTTAGAT 58.499 41.667 0.00 0.00 0.00 1.98
199 200 4.263331 GGGTGGAAGTGTGGAGAATTTAGA 60.263 45.833 0.00 0.00 0.00 2.10
200 201 4.010349 GGGTGGAAGTGTGGAGAATTTAG 58.990 47.826 0.00 0.00 0.00 1.85
201 202 3.558321 CGGGTGGAAGTGTGGAGAATTTA 60.558 47.826 0.00 0.00 0.00 1.40
202 203 2.814097 CGGGTGGAAGTGTGGAGAATTT 60.814 50.000 0.00 0.00 0.00 1.82
203 204 1.271379 CGGGTGGAAGTGTGGAGAATT 60.271 52.381 0.00 0.00 0.00 2.17
204 205 0.324943 CGGGTGGAAGTGTGGAGAAT 59.675 55.000 0.00 0.00 0.00 2.40
205 206 1.752198 CGGGTGGAAGTGTGGAGAA 59.248 57.895 0.00 0.00 0.00 2.87
206 207 2.879233 GCGGGTGGAAGTGTGGAGA 61.879 63.158 0.00 0.00 0.00 3.71
207 208 2.358737 GCGGGTGGAAGTGTGGAG 60.359 66.667 0.00 0.00 0.00 3.86
208 209 2.847234 AGCGGGTGGAAGTGTGGA 60.847 61.111 0.00 0.00 0.00 4.02
209 210 2.358737 GAGCGGGTGGAAGTGTGG 60.359 66.667 0.00 0.00 0.00 4.17
210 211 1.669115 CTGAGCGGGTGGAAGTGTG 60.669 63.158 0.00 0.00 0.00 3.82
211 212 1.821061 CTCTGAGCGGGTGGAAGTGT 61.821 60.000 0.00 0.00 0.00 3.55
212 213 1.079543 CTCTGAGCGGGTGGAAGTG 60.080 63.158 0.00 0.00 0.00 3.16
213 214 2.948720 GCTCTGAGCGGGTGGAAGT 61.949 63.158 14.68 0.00 0.00 3.01
214 215 2.125350 GCTCTGAGCGGGTGGAAG 60.125 66.667 14.68 0.00 0.00 3.46
215 216 2.454832 CTTGCTCTGAGCGGGTGGAA 62.455 60.000 23.35 10.79 46.26 3.53
216 217 2.922503 TTGCTCTGAGCGGGTGGA 60.923 61.111 23.35 3.09 46.26 4.02
217 218 1.888436 TACTTGCTCTGAGCGGGTGG 61.888 60.000 26.22 16.53 46.26 4.61
218 219 0.176680 ATACTTGCTCTGAGCGGGTG 59.823 55.000 26.22 17.92 46.26 4.61
219 220 1.776662 TATACTTGCTCTGAGCGGGT 58.223 50.000 23.35 23.36 46.26 5.28
220 221 3.393089 AATATACTTGCTCTGAGCGGG 57.607 47.619 23.35 19.46 46.26 6.13
221 222 4.489810 CCTAATATACTTGCTCTGAGCGG 58.510 47.826 23.35 19.78 46.26 5.52
222 223 4.021894 ACCCTAATATACTTGCTCTGAGCG 60.022 45.833 23.35 13.28 46.26 5.03
223 224 5.011125 TCACCCTAATATACTTGCTCTGAGC 59.989 44.000 22.38 22.38 42.82 4.26
224 225 6.266558 AGTCACCCTAATATACTTGCTCTGAG 59.733 42.308 0.00 0.00 0.00 3.35
225 226 6.136857 AGTCACCCTAATATACTTGCTCTGA 58.863 40.000 0.00 0.00 0.00 3.27
226 227 6.412362 AGTCACCCTAATATACTTGCTCTG 57.588 41.667 0.00 0.00 0.00 3.35
227 228 7.256012 GCTTAGTCACCCTAATATACTTGCTCT 60.256 40.741 0.00 0.00 35.14 4.09
228 229 6.869388 GCTTAGTCACCCTAATATACTTGCTC 59.131 42.308 0.00 0.00 35.14 4.26
229 230 6.326583 TGCTTAGTCACCCTAATATACTTGCT 59.673 38.462 0.00 0.00 35.14 3.91
230 231 6.522054 TGCTTAGTCACCCTAATATACTTGC 58.478 40.000 0.00 0.00 35.14 4.01
231 232 7.155328 CCTGCTTAGTCACCCTAATATACTTG 58.845 42.308 0.00 0.00 35.14 3.16
232 233 6.239629 GCCTGCTTAGTCACCCTAATATACTT 60.240 42.308 0.00 0.00 35.14 2.24
233 234 5.246429 GCCTGCTTAGTCACCCTAATATACT 59.754 44.000 0.00 0.00 35.14 2.12
234 235 5.246429 AGCCTGCTTAGTCACCCTAATATAC 59.754 44.000 0.00 0.00 35.14 1.47
235 236 5.403512 AGCCTGCTTAGTCACCCTAATATA 58.596 41.667 0.00 0.00 35.14 0.86
236 237 4.235372 AGCCTGCTTAGTCACCCTAATAT 58.765 43.478 0.00 0.00 35.14 1.28
237 238 3.654273 AGCCTGCTTAGTCACCCTAATA 58.346 45.455 0.00 0.00 35.14 0.98
238 239 2.482494 AGCCTGCTTAGTCACCCTAAT 58.518 47.619 0.00 0.00 35.14 1.73
239 240 1.952621 AGCCTGCTTAGTCACCCTAA 58.047 50.000 0.00 0.00 34.47 2.69
240 241 2.840640 TAGCCTGCTTAGTCACCCTA 57.159 50.000 0.00 0.00 0.00 3.53
241 242 2.182516 ATAGCCTGCTTAGTCACCCT 57.817 50.000 0.00 0.00 0.00 4.34
242 243 3.578716 TCATATAGCCTGCTTAGTCACCC 59.421 47.826 0.00 0.00 0.00 4.61
243 244 4.282195 ACTCATATAGCCTGCTTAGTCACC 59.718 45.833 0.00 0.00 0.00 4.02
244 245 5.461032 ACTCATATAGCCTGCTTAGTCAC 57.539 43.478 0.00 0.00 0.00 3.67
245 246 5.740224 GCAACTCATATAGCCTGCTTAGTCA 60.740 44.000 0.00 0.00 35.45 3.41
246 247 4.688413 GCAACTCATATAGCCTGCTTAGTC 59.312 45.833 0.00 0.00 35.45 2.59
247 248 4.503991 GGCAACTCATATAGCCTGCTTAGT 60.504 45.833 0.00 0.00 43.70 2.24
248 249 3.999663 GGCAACTCATATAGCCTGCTTAG 59.000 47.826 0.00 0.00 43.70 2.18
249 250 4.008074 GGCAACTCATATAGCCTGCTTA 57.992 45.455 0.00 0.00 43.70 3.09
250 251 2.856222 GGCAACTCATATAGCCTGCTT 58.144 47.619 0.00 0.00 43.70 3.91
251 252 2.557920 GGCAACTCATATAGCCTGCT 57.442 50.000 0.00 0.00 43.70 4.24
256 257 4.697514 TCTGAAGTGGCAACTCATATAGC 58.302 43.478 0.00 0.00 34.77 2.97
257 258 7.281774 ACAAATCTGAAGTGGCAACTCATATAG 59.718 37.037 0.00 0.00 34.77 1.31
258 259 7.066163 CACAAATCTGAAGTGGCAACTCATATA 59.934 37.037 0.00 0.00 34.77 0.86
259 260 5.948162 ACAAATCTGAAGTGGCAACTCATAT 59.052 36.000 0.00 0.00 34.77 1.78
260 261 5.181811 CACAAATCTGAAGTGGCAACTCATA 59.818 40.000 0.00 0.00 34.77 2.15
261 262 4.022589 CACAAATCTGAAGTGGCAACTCAT 60.023 41.667 0.00 0.00 34.77 2.90
262 263 3.316029 CACAAATCTGAAGTGGCAACTCA 59.684 43.478 0.00 0.00 34.77 3.41
263 264 3.565482 TCACAAATCTGAAGTGGCAACTC 59.435 43.478 0.00 0.00 34.77 3.01
264 265 3.554934 TCACAAATCTGAAGTGGCAACT 58.445 40.909 0.00 0.00 38.71 3.16
265 266 3.988379 TCACAAATCTGAAGTGGCAAC 57.012 42.857 0.00 0.00 34.17 4.17
266 267 4.143543 TCATCACAAATCTGAAGTGGCAA 58.856 39.130 0.00 0.00 34.17 4.52
267 268 3.753815 TCATCACAAATCTGAAGTGGCA 58.246 40.909 7.94 0.00 34.17 4.92
268 269 4.157289 ACATCATCACAAATCTGAAGTGGC 59.843 41.667 7.94 0.00 34.17 5.01
269 270 5.392703 CCACATCATCACAAATCTGAAGTGG 60.393 44.000 10.59 10.59 46.20 4.00
270 271 5.413523 TCCACATCATCACAAATCTGAAGTG 59.586 40.000 0.00 0.00 37.98 3.16
271 272 5.563592 TCCACATCATCACAAATCTGAAGT 58.436 37.500 0.00 0.00 0.00 3.01
272 273 5.066117 CCTCCACATCATCACAAATCTGAAG 59.934 44.000 0.00 0.00 0.00 3.02
273 274 4.945543 CCTCCACATCATCACAAATCTGAA 59.054 41.667 0.00 0.00 0.00 3.02
274 275 4.225717 TCCTCCACATCATCACAAATCTGA 59.774 41.667 0.00 0.00 0.00 3.27
275 276 4.520179 TCCTCCACATCATCACAAATCTG 58.480 43.478 0.00 0.00 0.00 2.90
276 277 4.472470 TCTCCTCCACATCATCACAAATCT 59.528 41.667 0.00 0.00 0.00 2.40
277 278 4.774124 TCTCCTCCACATCATCACAAATC 58.226 43.478 0.00 0.00 0.00 2.17
278 279 4.384978 CCTCTCCTCCACATCATCACAAAT 60.385 45.833 0.00 0.00 0.00 2.32
279 280 3.054875 CCTCTCCTCCACATCATCACAAA 60.055 47.826 0.00 0.00 0.00 2.83
280 281 2.502947 CCTCTCCTCCACATCATCACAA 59.497 50.000 0.00 0.00 0.00 3.33
281 282 2.113807 CCTCTCCTCCACATCATCACA 58.886 52.381 0.00 0.00 0.00 3.58
282 283 2.364970 CTCCTCTCCTCCACATCATCAC 59.635 54.545 0.00 0.00 0.00 3.06
283 284 2.245806 TCTCCTCTCCTCCACATCATCA 59.754 50.000 0.00 0.00 0.00 3.07
284 285 2.892852 CTCTCCTCTCCTCCACATCATC 59.107 54.545 0.00 0.00 0.00 2.92
285 286 2.517553 TCTCTCCTCTCCTCCACATCAT 59.482 50.000 0.00 0.00 0.00 2.45
286 287 1.925959 TCTCTCCTCTCCTCCACATCA 59.074 52.381 0.00 0.00 0.00 3.07
287 288 2.174639 TCTCTCTCCTCTCCTCCACATC 59.825 54.545 0.00 0.00 0.00 3.06
288 289 2.213310 TCTCTCTCCTCTCCTCCACAT 58.787 52.381 0.00 0.00 0.00 3.21
289 290 1.675007 TCTCTCTCCTCTCCTCCACA 58.325 55.000 0.00 0.00 0.00 4.17
290 291 2.241176 TCTTCTCTCTCCTCTCCTCCAC 59.759 54.545 0.00 0.00 0.00 4.02
291 292 2.567862 TCTTCTCTCTCCTCTCCTCCA 58.432 52.381 0.00 0.00 0.00 3.86
292 293 3.138283 TCATCTTCTCTCTCCTCTCCTCC 59.862 52.174 0.00 0.00 0.00 4.30
293 294 4.141390 ACTCATCTTCTCTCTCCTCTCCTC 60.141 50.000 0.00 0.00 0.00 3.71
294 295 3.788142 ACTCATCTTCTCTCTCCTCTCCT 59.212 47.826 0.00 0.00 0.00 3.69
295 296 3.885297 CACTCATCTTCTCTCTCCTCTCC 59.115 52.174 0.00 0.00 0.00 3.71
296 297 3.885297 CCACTCATCTTCTCTCTCCTCTC 59.115 52.174 0.00 0.00 0.00 3.20
297 298 3.373001 CCCACTCATCTTCTCTCTCCTCT 60.373 52.174 0.00 0.00 0.00 3.69
298 299 2.958355 CCCACTCATCTTCTCTCTCCTC 59.042 54.545 0.00 0.00 0.00 3.71
299 300 2.314549 ACCCACTCATCTTCTCTCTCCT 59.685 50.000 0.00 0.00 0.00 3.69
300 301 2.745968 ACCCACTCATCTTCTCTCTCC 58.254 52.381 0.00 0.00 0.00 3.71
301 302 3.513515 ACAACCCACTCATCTTCTCTCTC 59.486 47.826 0.00 0.00 0.00 3.20
302 303 3.515562 ACAACCCACTCATCTTCTCTCT 58.484 45.455 0.00 0.00 0.00 3.10
303 304 3.971245 ACAACCCACTCATCTTCTCTC 57.029 47.619 0.00 0.00 0.00 3.20
304 305 5.308237 AGTTTACAACCCACTCATCTTCTCT 59.692 40.000 0.00 0.00 0.00 3.10
305 306 5.552178 AGTTTACAACCCACTCATCTTCTC 58.448 41.667 0.00 0.00 0.00 2.87
306 307 5.568620 AGTTTACAACCCACTCATCTTCT 57.431 39.130 0.00 0.00 0.00 2.85
307 308 5.531287 ACAAGTTTACAACCCACTCATCTTC 59.469 40.000 0.00 0.00 0.00 2.87
308 309 5.445964 ACAAGTTTACAACCCACTCATCTT 58.554 37.500 0.00 0.00 0.00 2.40
309 310 5.048846 ACAAGTTTACAACCCACTCATCT 57.951 39.130 0.00 0.00 0.00 2.90
310 311 5.995897 ACTACAAGTTTACAACCCACTCATC 59.004 40.000 0.00 0.00 0.00 2.92
311 312 5.937111 ACTACAAGTTTACAACCCACTCAT 58.063 37.500 0.00 0.00 0.00 2.90
312 313 5.104859 TGACTACAAGTTTACAACCCACTCA 60.105 40.000 0.00 0.00 0.00 3.41
313 314 5.362263 TGACTACAAGTTTACAACCCACTC 58.638 41.667 0.00 0.00 0.00 3.51
314 315 5.362105 TGACTACAAGTTTACAACCCACT 57.638 39.130 0.00 0.00 0.00 4.00
315 316 4.024302 GCTGACTACAAGTTTACAACCCAC 60.024 45.833 0.00 0.00 0.00 4.61
316 317 4.131596 GCTGACTACAAGTTTACAACCCA 58.868 43.478 0.00 0.00 0.00 4.51
317 318 4.213482 CAGCTGACTACAAGTTTACAACCC 59.787 45.833 8.42 0.00 0.00 4.11
318 319 4.319549 GCAGCTGACTACAAGTTTACAACC 60.320 45.833 20.43 0.00 0.00 3.77
319 320 4.272504 TGCAGCTGACTACAAGTTTACAAC 59.727 41.667 20.43 0.00 0.00 3.32
320 321 4.447290 TGCAGCTGACTACAAGTTTACAA 58.553 39.130 20.43 0.00 0.00 2.41
321 322 4.058124 CTGCAGCTGACTACAAGTTTACA 58.942 43.478 20.43 0.00 0.00 2.41
322 323 3.120511 GCTGCAGCTGACTACAAGTTTAC 60.121 47.826 31.33 0.00 38.21 2.01
323 324 3.067106 GCTGCAGCTGACTACAAGTTTA 58.933 45.455 31.33 0.00 38.21 2.01
324 325 1.876156 GCTGCAGCTGACTACAAGTTT 59.124 47.619 31.33 0.00 38.21 2.66
325 326 1.202687 TGCTGCAGCTGACTACAAGTT 60.203 47.619 36.61 0.00 42.66 2.66
326 327 0.394192 TGCTGCAGCTGACTACAAGT 59.606 50.000 36.61 0.00 42.66 3.16
327 328 0.795085 GTGCTGCAGCTGACTACAAG 59.205 55.000 36.61 5.31 42.66 3.16
328 329 0.945743 CGTGCTGCAGCTGACTACAA 60.946 55.000 36.61 13.65 42.66 2.41
329 330 1.373371 CGTGCTGCAGCTGACTACA 60.373 57.895 36.61 14.44 42.66 2.74
330 331 1.075425 CTCGTGCTGCAGCTGACTAC 61.075 60.000 36.61 25.08 42.66 2.73
331 332 1.213799 CTCGTGCTGCAGCTGACTA 59.786 57.895 36.61 19.63 42.66 2.59
332 333 2.048409 CTCGTGCTGCAGCTGACT 60.048 61.111 36.61 0.00 42.66 3.41
333 334 3.786586 GCTCGTGCTGCAGCTGAC 61.787 66.667 36.61 26.48 42.66 3.51
343 344 3.251043 GTGCGCTAGAGCTCGTGC 61.251 66.667 19.55 17.20 39.32 5.34
344 345 0.734253 AAAGTGCGCTAGAGCTCGTG 60.734 55.000 19.55 6.36 39.32 4.35
345 346 0.734253 CAAAGTGCGCTAGAGCTCGT 60.734 55.000 19.55 11.30 39.32 4.18
346 347 0.734253 ACAAAGTGCGCTAGAGCTCG 60.734 55.000 19.55 6.24 39.32 5.03
347 348 0.718343 CACAAAGTGCGCTAGAGCTC 59.282 55.000 19.55 15.66 39.32 4.09
348 349 0.318441 TCACAAAGTGCGCTAGAGCT 59.682 50.000 19.55 0.00 38.13 4.09
349 350 0.718343 CTCACAAAGTGCGCTAGAGC 59.282 55.000 12.00 12.00 32.98 4.09
350 351 2.257894 CTCTCACAAAGTGCGCTAGAG 58.742 52.381 9.73 4.81 32.98 2.43
351 352 1.067565 CCTCTCACAAAGTGCGCTAGA 60.068 52.381 9.73 0.00 32.98 2.43
352 353 1.067565 TCCTCTCACAAAGTGCGCTAG 60.068 52.381 9.73 0.00 32.98 3.42
353 354 0.966179 TCCTCTCACAAAGTGCGCTA 59.034 50.000 9.73 0.00 32.98 4.26
354 355 0.320247 CTCCTCTCACAAAGTGCGCT 60.320 55.000 9.73 0.00 32.98 5.92
355 356 0.319900 TCTCCTCTCACAAAGTGCGC 60.320 55.000 0.00 0.00 32.98 6.09
356 357 2.064762 CTTCTCCTCTCACAAAGTGCG 58.935 52.381 0.00 0.00 32.98 5.34
357 358 2.224402 ACCTTCTCCTCTCACAAAGTGC 60.224 50.000 0.00 0.00 32.98 4.40
358 359 3.397482 CACCTTCTCCTCTCACAAAGTG 58.603 50.000 0.00 0.00 34.45 3.16
359 360 2.370189 CCACCTTCTCCTCTCACAAAGT 59.630 50.000 0.00 0.00 0.00 2.66
360 361 2.289945 CCCACCTTCTCCTCTCACAAAG 60.290 54.545 0.00 0.00 0.00 2.77
361 362 1.699634 CCCACCTTCTCCTCTCACAAA 59.300 52.381 0.00 0.00 0.00 2.83
362 363 1.352083 CCCACCTTCTCCTCTCACAA 58.648 55.000 0.00 0.00 0.00 3.33
363 364 0.545309 CCCCACCTTCTCCTCTCACA 60.545 60.000 0.00 0.00 0.00 3.58
364 365 0.545548 ACCCCACCTTCTCCTCTCAC 60.546 60.000 0.00 0.00 0.00 3.51
365 366 0.252284 GACCCCACCTTCTCCTCTCA 60.252 60.000 0.00 0.00 0.00 3.27
366 367 0.041982 AGACCCCACCTTCTCCTCTC 59.958 60.000 0.00 0.00 0.00 3.20
367 368 1.394532 TAGACCCCACCTTCTCCTCT 58.605 55.000 0.00 0.00 0.00 3.69
368 369 2.112190 CTTAGACCCCACCTTCTCCTC 58.888 57.143 0.00 0.00 0.00 3.71
369 370 1.273896 CCTTAGACCCCACCTTCTCCT 60.274 57.143 0.00 0.00 0.00 3.69
370 371 1.205055 CCTTAGACCCCACCTTCTCC 58.795 60.000 0.00 0.00 0.00 3.71
371 372 0.542333 GCCTTAGACCCCACCTTCTC 59.458 60.000 0.00 0.00 0.00 2.87
372 373 0.119358 AGCCTTAGACCCCACCTTCT 59.881 55.000 0.00 0.00 0.00 2.85
373 374 1.875488 TAGCCTTAGACCCCACCTTC 58.125 55.000 0.00 0.00 0.00 3.46
374 375 2.588925 ATAGCCTTAGACCCCACCTT 57.411 50.000 0.00 0.00 0.00 3.50
375 376 2.795960 TCTATAGCCTTAGACCCCACCT 59.204 50.000 0.00 0.00 0.00 4.00
376 377 3.255634 TCTATAGCCTTAGACCCCACC 57.744 52.381 0.00 0.00 0.00 4.61
377 378 4.021016 CACATCTATAGCCTTAGACCCCAC 60.021 50.000 0.00 0.00 31.25 4.61
378 379 4.160329 CACATCTATAGCCTTAGACCCCA 58.840 47.826 0.00 0.00 31.25 4.96
379 380 3.515901 CCACATCTATAGCCTTAGACCCC 59.484 52.174 0.00 0.00 31.25 4.95
380 381 3.055747 GCCACATCTATAGCCTTAGACCC 60.056 52.174 0.00 0.00 31.25 4.46
381 382 3.578716 TGCCACATCTATAGCCTTAGACC 59.421 47.826 0.00 0.00 31.25 3.85
382 383 4.039245 TGTGCCACATCTATAGCCTTAGAC 59.961 45.833 0.00 0.00 31.25 2.59
383 384 4.223144 TGTGCCACATCTATAGCCTTAGA 58.777 43.478 0.00 0.00 32.94 2.10
384 385 4.607293 TGTGCCACATCTATAGCCTTAG 57.393 45.455 0.00 0.00 0.00 2.18
385 386 5.130311 TCTTTGTGCCACATCTATAGCCTTA 59.870 40.000 0.00 0.00 0.00 2.69
386 387 3.931907 TTGTGCCACATCTATAGCCTT 57.068 42.857 0.00 0.00 0.00 4.35
387 388 3.455910 TCTTTGTGCCACATCTATAGCCT 59.544 43.478 0.00 0.00 0.00 4.58
388 389 3.808728 TCTTTGTGCCACATCTATAGCC 58.191 45.455 0.00 0.00 0.00 3.93
389 390 5.121454 GCTATCTTTGTGCCACATCTATAGC 59.879 44.000 20.48 20.48 34.81 2.97
390 391 6.226052 TGCTATCTTTGTGCCACATCTATAG 58.774 40.000 0.00 7.32 0.00 1.31
391 392 6.173427 TGCTATCTTTGTGCCACATCTATA 57.827 37.500 0.00 0.00 0.00 1.31
392 393 5.039920 TGCTATCTTTGTGCCACATCTAT 57.960 39.130 0.00 0.00 0.00 1.98
393 394 4.486125 TGCTATCTTTGTGCCACATCTA 57.514 40.909 0.00 0.00 0.00 1.98
394 395 3.354948 TGCTATCTTTGTGCCACATCT 57.645 42.857 0.00 0.00 0.00 2.90
395 396 3.428045 GGTTGCTATCTTTGTGCCACATC 60.428 47.826 0.00 0.00 0.00 3.06
396 397 2.493278 GGTTGCTATCTTTGTGCCACAT 59.507 45.455 0.00 0.00 0.00 3.21
397 398 1.885887 GGTTGCTATCTTTGTGCCACA 59.114 47.619 0.00 0.00 0.00 4.17
398 399 1.135689 CGGTTGCTATCTTTGTGCCAC 60.136 52.381 0.00 0.00 0.00 5.01
399 400 1.164411 CGGTTGCTATCTTTGTGCCA 58.836 50.000 0.00 0.00 0.00 4.92
400 401 0.451783 CCGGTTGCTATCTTTGTGCC 59.548 55.000 0.00 0.00 0.00 5.01
401 402 0.451783 CCCGGTTGCTATCTTTGTGC 59.548 55.000 0.00 0.00 0.00 4.57
402 403 1.094785 CCCCGGTTGCTATCTTTGTG 58.905 55.000 0.00 0.00 0.00 3.33
403 404 0.988832 TCCCCGGTTGCTATCTTTGT 59.011 50.000 0.00 0.00 0.00 2.83
404 405 1.379527 GTCCCCGGTTGCTATCTTTG 58.620 55.000 0.00 0.00 0.00 2.77
405 406 0.107848 CGTCCCCGGTTGCTATCTTT 60.108 55.000 0.00 0.00 0.00 2.52
406 407 1.262640 ACGTCCCCGGTTGCTATCTT 61.263 55.000 0.00 0.00 38.78 2.40
407 408 1.684734 ACGTCCCCGGTTGCTATCT 60.685 57.895 0.00 0.00 38.78 1.98
408 409 1.520787 CACGTCCCCGGTTGCTATC 60.521 63.158 0.00 0.00 38.78 2.08
409 410 1.546589 TTCACGTCCCCGGTTGCTAT 61.547 55.000 0.00 0.00 38.78 2.97
410 411 2.208619 TTCACGTCCCCGGTTGCTA 61.209 57.895 0.00 0.00 38.78 3.49
411 412 3.552384 TTCACGTCCCCGGTTGCT 61.552 61.111 0.00 0.00 38.78 3.91
412 413 3.351416 GTTCACGTCCCCGGTTGC 61.351 66.667 0.00 0.00 38.78 4.17
413 414 1.227734 AAGTTCACGTCCCCGGTTG 60.228 57.895 0.00 0.00 38.78 3.77
414 415 1.227734 CAAGTTCACGTCCCCGGTT 60.228 57.895 0.00 0.00 38.78 4.44
415 416 2.424302 CAAGTTCACGTCCCCGGT 59.576 61.111 0.00 0.00 38.78 5.28
416 417 2.358247 CCAAGTTCACGTCCCCGG 60.358 66.667 0.00 0.00 38.78 5.73
417 418 1.959226 CACCAAGTTCACGTCCCCG 60.959 63.158 0.00 0.00 40.83 5.73
418 419 2.258726 GCACCAAGTTCACGTCCCC 61.259 63.158 0.00 0.00 0.00 4.81
419 420 1.227853 AGCACCAAGTTCACGTCCC 60.228 57.895 0.00 0.00 0.00 4.46
420 421 0.249911 AGAGCACCAAGTTCACGTCC 60.250 55.000 0.00 0.00 0.00 4.79
421 422 1.261619 CAAGAGCACCAAGTTCACGTC 59.738 52.381 0.00 0.00 0.00 4.34
422 423 1.299541 CAAGAGCACCAAGTTCACGT 58.700 50.000 0.00 0.00 0.00 4.49
423 424 0.588252 CCAAGAGCACCAAGTTCACG 59.412 55.000 0.00 0.00 0.00 4.35
424 425 0.954452 CCCAAGAGCACCAAGTTCAC 59.046 55.000 0.00 0.00 0.00 3.18
425 426 0.550914 ACCCAAGAGCACCAAGTTCA 59.449 50.000 0.00 0.00 0.00 3.18
426 427 0.954452 CACCCAAGAGCACCAAGTTC 59.046 55.000 0.00 0.00 0.00 3.01
427 428 1.109323 GCACCCAAGAGCACCAAGTT 61.109 55.000 0.00 0.00 0.00 2.66
428 429 1.529244 GCACCCAAGAGCACCAAGT 60.529 57.895 0.00 0.00 0.00 3.16
429 430 0.036732 TAGCACCCAAGAGCACCAAG 59.963 55.000 0.00 0.00 31.08 3.61
430 431 0.036732 CTAGCACCCAAGAGCACCAA 59.963 55.000 0.00 0.00 31.08 3.67
431 432 1.679311 CTAGCACCCAAGAGCACCA 59.321 57.895 0.00 0.00 31.08 4.17
432 433 1.746991 GCTAGCACCCAAGAGCACC 60.747 63.158 10.63 0.00 34.96 5.01
433 434 2.103042 CGCTAGCACCCAAGAGCAC 61.103 63.158 16.45 0.00 34.49 4.40
434 435 2.265739 CGCTAGCACCCAAGAGCA 59.734 61.111 16.45 0.00 34.49 4.26
435 436 3.198489 GCGCTAGCACCCAAGAGC 61.198 66.667 16.45 3.20 44.35 4.09
445 446 0.387929 TGTACATAGGGTGCGCTAGC 59.612 55.000 9.73 4.06 45.41 3.42
446 447 1.269621 GGTGTACATAGGGTGCGCTAG 60.270 57.143 9.73 0.00 41.64 3.42
447 448 0.748450 GGTGTACATAGGGTGCGCTA 59.252 55.000 9.73 0.00 41.64 4.26
448 449 1.261938 TGGTGTACATAGGGTGCGCT 61.262 55.000 9.73 0.00 41.64 5.92
449 450 0.391927 TTGGTGTACATAGGGTGCGC 60.392 55.000 0.00 0.00 41.26 6.09
450 451 2.102070 TTTGGTGTACATAGGGTGCG 57.898 50.000 0.00 0.00 34.44 5.34
451 452 4.777463 ACTATTTGGTGTACATAGGGTGC 58.223 43.478 0.00 0.00 0.00 5.01
452 453 8.044908 ACTAAACTATTTGGTGTACATAGGGTG 58.955 37.037 0.00 0.00 32.80 4.61
453 454 8.154420 ACTAAACTATTTGGTGTACATAGGGT 57.846 34.615 0.00 0.00 32.80 4.34
511 512 9.023962 AGTACTTGATCATATTTGGCTCAAAAA 57.976 29.630 0.00 0.00 36.90 1.94
512 513 8.579850 AGTACTTGATCATATTTGGCTCAAAA 57.420 30.769 0.00 0.00 36.90 2.44
513 514 7.828717 TGAGTACTTGATCATATTTGGCTCAAA 59.171 33.333 0.00 3.33 37.75 2.69
514 515 7.337938 TGAGTACTTGATCATATTTGGCTCAA 58.662 34.615 0.00 0.00 0.00 3.02
515 516 6.888105 TGAGTACTTGATCATATTTGGCTCA 58.112 36.000 0.00 2.38 0.00 4.26
516 517 7.976135 ATGAGTACTTGATCATATTTGGCTC 57.024 36.000 0.00 0.00 34.42 4.70
528 529 9.408648 CCCAAACCTTTTATATGAGTACTTGAT 57.591 33.333 0.00 0.00 0.00 2.57
529 530 7.338449 GCCCAAACCTTTTATATGAGTACTTGA 59.662 37.037 0.00 0.00 0.00 3.02
530 531 7.122055 TGCCCAAACCTTTTATATGAGTACTTG 59.878 37.037 0.00 0.00 0.00 3.16
531 532 7.179269 TGCCCAAACCTTTTATATGAGTACTT 58.821 34.615 0.00 0.00 0.00 2.24
532 533 6.727394 TGCCCAAACCTTTTATATGAGTACT 58.273 36.000 0.00 0.00 0.00 2.73
533 534 7.338449 TCTTGCCCAAACCTTTTATATGAGTAC 59.662 37.037 0.00 0.00 0.00 2.73
534 535 7.406916 TCTTGCCCAAACCTTTTATATGAGTA 58.593 34.615 0.00 0.00 0.00 2.59
535 536 6.252995 TCTTGCCCAAACCTTTTATATGAGT 58.747 36.000 0.00 0.00 0.00 3.41
536 537 6.773976 TCTTGCCCAAACCTTTTATATGAG 57.226 37.500 0.00 0.00 0.00 2.90
537 538 7.546250 TTTCTTGCCCAAACCTTTTATATGA 57.454 32.000 0.00 0.00 0.00 2.15
538 539 8.040132 TCATTTCTTGCCCAAACCTTTTATATG 58.960 33.333 0.00 0.00 0.00 1.78
539 540 8.144862 TCATTTCTTGCCCAAACCTTTTATAT 57.855 30.769 0.00 0.00 0.00 0.86
540 541 7.546250 TCATTTCTTGCCCAAACCTTTTATA 57.454 32.000 0.00 0.00 0.00 0.98
541 542 6.432403 TCATTTCTTGCCCAAACCTTTTAT 57.568 33.333 0.00 0.00 0.00 1.40
542 543 5.878406 TCATTTCTTGCCCAAACCTTTTA 57.122 34.783 0.00 0.00 0.00 1.52
543 544 4.769345 TCATTTCTTGCCCAAACCTTTT 57.231 36.364 0.00 0.00 0.00 2.27
544 545 4.980339 ATCATTTCTTGCCCAAACCTTT 57.020 36.364 0.00 0.00 0.00 3.11
545 546 4.980339 AATCATTTCTTGCCCAAACCTT 57.020 36.364 0.00 0.00 0.00 3.50
546 547 4.898320 GAAATCATTTCTTGCCCAAACCT 58.102 39.130 2.58 0.00 36.73 3.50
558 559 6.758416 GCCCCAAAGTCAATAGAAATCATTTC 59.242 38.462 1.42 1.42 39.96 2.17
559 560 6.213195 TGCCCCAAAGTCAATAGAAATCATTT 59.787 34.615 0.00 0.00 0.00 2.32
560 561 5.721000 TGCCCCAAAGTCAATAGAAATCATT 59.279 36.000 0.00 0.00 0.00 2.57
561 562 5.271598 TGCCCCAAAGTCAATAGAAATCAT 58.728 37.500 0.00 0.00 0.00 2.45
562 563 4.671831 TGCCCCAAAGTCAATAGAAATCA 58.328 39.130 0.00 0.00 0.00 2.57
563 564 5.659440 TTGCCCCAAAGTCAATAGAAATC 57.341 39.130 0.00 0.00 0.00 2.17
564 565 6.432403 TTTTGCCCCAAAGTCAATAGAAAT 57.568 33.333 0.00 0.00 34.72 2.17
565 566 5.878406 TTTTGCCCCAAAGTCAATAGAAA 57.122 34.783 0.00 0.00 34.72 2.52
566 567 5.600484 TCTTTTTGCCCCAAAGTCAATAGAA 59.400 36.000 0.00 0.00 34.72 2.10
567 568 5.144100 TCTTTTTGCCCCAAAGTCAATAGA 58.856 37.500 0.00 0.00 34.72 1.98
568 569 5.467035 TCTTTTTGCCCCAAAGTCAATAG 57.533 39.130 0.00 0.00 34.72 1.73
569 570 7.546250 TTATCTTTTTGCCCCAAAGTCAATA 57.454 32.000 0.00 0.00 34.72 1.90
570 571 4.980339 ATCTTTTTGCCCCAAAGTCAAT 57.020 36.364 0.00 0.00 34.72 2.57
571 572 5.878406 TTATCTTTTTGCCCCAAAGTCAA 57.122 34.783 0.00 0.00 34.72 3.18
572 573 5.741673 GCTTTATCTTTTTGCCCCAAAGTCA 60.742 40.000 0.00 0.00 34.72 3.41
573 574 4.690748 GCTTTATCTTTTTGCCCCAAAGTC 59.309 41.667 0.00 0.00 34.72 3.01
574 575 4.347876 AGCTTTATCTTTTTGCCCCAAAGT 59.652 37.500 0.00 0.00 34.72 2.66
575 576 4.898320 AGCTTTATCTTTTTGCCCCAAAG 58.102 39.130 0.00 0.00 34.72 2.77
576 577 4.972751 AGCTTTATCTTTTTGCCCCAAA 57.027 36.364 0.00 0.00 0.00 3.28
577 578 5.719085 TCATAGCTTTATCTTTTTGCCCCAA 59.281 36.000 0.00 0.00 0.00 4.12
578 579 5.127031 GTCATAGCTTTATCTTTTTGCCCCA 59.873 40.000 0.00 0.00 0.00 4.96
579 580 5.592054 GTCATAGCTTTATCTTTTTGCCCC 58.408 41.667 0.00 0.00 0.00 5.80
580 581 5.065988 TCGTCATAGCTTTATCTTTTTGCCC 59.934 40.000 0.00 0.00 0.00 5.36
581 582 6.119144 TCGTCATAGCTTTATCTTTTTGCC 57.881 37.500 0.00 0.00 0.00 4.52
582 583 9.884465 ATTATCGTCATAGCTTTATCTTTTTGC 57.116 29.630 0.00 0.00 0.00 3.68
627 628 4.339814 CCTATTTATGCTACCCCGCAAAAA 59.660 41.667 0.00 0.00 44.06 1.94
628 629 3.886505 CCTATTTATGCTACCCCGCAAAA 59.113 43.478 0.00 0.00 44.06 2.44
629 630 3.136809 TCCTATTTATGCTACCCCGCAAA 59.863 43.478 0.00 0.00 44.06 3.68
630 631 2.706723 TCCTATTTATGCTACCCCGCAA 59.293 45.455 0.00 0.00 44.06 4.85
631 632 2.301870 CTCCTATTTATGCTACCCCGCA 59.698 50.000 0.00 0.00 45.10 5.69
632 633 2.302157 ACTCCTATTTATGCTACCCCGC 59.698 50.000 0.00 0.00 0.00 6.13
633 634 4.771054 AGTACTCCTATTTATGCTACCCCG 59.229 45.833 0.00 0.00 0.00 5.73
634 635 6.042897 ACAAGTACTCCTATTTATGCTACCCC 59.957 42.308 0.00 0.00 0.00 4.95
635 636 7.063934 ACAAGTACTCCTATTTATGCTACCC 57.936 40.000 0.00 0.00 0.00 3.69
678 683 8.733458 TGACTTTCATTGTATCCTTGATCAAAG 58.267 33.333 9.88 3.38 35.47 2.77
686 691 7.121759 CCACAGAATGACTTTCATTGTATCCTT 59.878 37.037 6.14 0.00 46.20 3.36
785 790 5.770162 GCCAGAGCACCCTATATGTAAAAAT 59.230 40.000 0.00 0.00 39.53 1.82
791 796 1.806496 TGCCAGAGCACCCTATATGT 58.194 50.000 0.00 0.00 46.52 2.29
804 809 3.695606 GTGCTCTCGGGTGCCAGA 61.696 66.667 6.92 0.00 0.00 3.86
824 829 3.117046 GTCCGCTGCTAGAGAAATACAC 58.883 50.000 0.00 0.00 0.00 2.90
843 848 1.618640 GAGAGCACCAAGTTCGCGTC 61.619 60.000 5.77 0.31 31.99 5.19
864 869 4.025858 TGCTCAGCTGCTCCCCAC 62.026 66.667 9.47 0.00 0.00 4.61
945 1753 0.952010 CGGTGGTTAGGGTTTGACCG 60.952 60.000 0.00 0.00 39.83 4.79
1560 2420 1.884579 GCCATGCATATCACCCTGAAG 59.115 52.381 0.00 0.00 0.00 3.02
1748 2611 1.144936 GCCGAGTAGAAGCAGCCAT 59.855 57.895 0.00 0.00 0.00 4.40
1875 2742 1.218875 TACCGTGTTCTGCAAGTGCG 61.219 55.000 0.00 0.00 45.83 5.34
1932 2808 0.988832 TACCCACTACAAAGCCAGGG 59.011 55.000 0.00 0.00 38.16 4.45
1947 2823 2.969262 CTCAAGGGATCCTTCTCTACCC 59.031 54.545 12.58 0.00 42.67 3.69
1999 2875 4.663636 AAACAAGACGAAACGATCCATC 57.336 40.909 0.00 0.00 0.00 3.51
2280 3171 1.067582 GCCGAAGTATGGGAGGACG 59.932 63.158 0.00 0.00 0.00 4.79
2285 3176 1.342672 GGGGAAGCCGAAGTATGGGA 61.343 60.000 0.00 0.00 0.00 4.37
2316 3207 6.637658 GCTTACAACTTCATATAGTCGGTCTC 59.362 42.308 0.00 0.00 0.00 3.36
2432 3323 4.150897 TCCTACATGCACAATTAGGACC 57.849 45.455 9.38 0.00 36.08 4.46
2458 3349 6.831353 TCCTAACAGAAACAGAATCAACCAAA 59.169 34.615 0.00 0.00 0.00 3.28
2480 3371 7.509546 TCTTCACTACTTTGACAAATTCTCCT 58.490 34.615 0.05 0.00 0.00 3.69
2511 3402 3.020984 GGACAGGTCAGAAACAAACCAA 58.979 45.455 1.41 0.00 35.43 3.67
2569 3460 7.973944 GGGATAAATGCTTTTCAAGTACGAATT 59.026 33.333 0.11 0.00 0.00 2.17
2570 3461 7.122055 TGGGATAAATGCTTTTCAAGTACGAAT 59.878 33.333 0.11 0.00 0.00 3.34
2584 3476 6.543430 TGCAAATTTAGTGGGATAAATGCT 57.457 33.333 0.00 0.00 35.91 3.79
2661 3554 0.250989 TACCCAGGAAAACCAAGCCG 60.251 55.000 0.00 0.00 0.00 5.52
2714 3607 2.165030 CCAATGATCAAACCAGTCTGGC 59.835 50.000 19.40 1.83 42.67 4.85
2768 4917 4.864916 ACTAGCATAATCAAACACAGCG 57.135 40.909 0.00 0.00 0.00 5.18
2879 5028 7.093992 GCACTACCATTCCAATAGATAGTCTC 58.906 42.308 0.00 0.00 0.00 3.36
2956 5105 5.482006 GCCCTCAAGCAACATTCTTATTTT 58.518 37.500 0.00 0.00 0.00 1.82
2960 5109 2.041620 AGGCCCTCAAGCAACATTCTTA 59.958 45.455 0.00 0.00 0.00 2.10
3033 5182 8.046708 ACATGTAATCCTAGTTCTGCAACATAA 58.953 33.333 0.00 0.00 34.60 1.90
3040 5189 4.101741 AGGGACATGTAATCCTAGTTCTGC 59.898 45.833 11.75 0.00 36.40 4.26
3079 5228 5.591472 AGCACATAATTAAGCTGCTCATTCA 59.409 36.000 1.00 0.00 32.68 2.57
3121 5275 7.938140 AAATTAGACCAGCTATGCAAAACTA 57.062 32.000 0.00 0.00 0.00 2.24
3158 5312 5.129155 CCAGGGCCATCTTATGAAATTTTGA 59.871 40.000 6.18 0.00 0.00 2.69
3165 5319 1.905839 TCCCAGGGCCATCTTATGAA 58.094 50.000 6.18 0.00 0.00 2.57
3227 5381 9.010366 GTTACAACAAAGAAGAAAACTGATGTC 57.990 33.333 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.