Multiple sequence alignment - TraesCS6D01G092300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G092300 chr6D 100.000 5135 0 0 1 5135 57896877 57902011 0.000000e+00 9483.0
1 TraesCS6D01G092300 chr6D 93.805 113 4 3 1719 1831 466538229 466538120 3.180000e-37 167.0
2 TraesCS6D01G092300 chr6D 83.735 166 24 3 4353 4516 83443549 83443713 2.480000e-33 154.0
3 TraesCS6D01G092300 chr6B 92.961 3708 187 26 641 4289 129853329 129857021 0.000000e+00 5334.0
4 TraesCS6D01G092300 chr6B 93.614 642 30 4 1 642 129852627 129853257 0.000000e+00 948.0
5 TraesCS6D01G092300 chr6A 94.275 2201 117 6 2001 4193 73067882 73070081 0.000000e+00 3358.0
6 TraesCS6D01G092300 chr6A 94.751 1086 41 6 641 1723 73066468 73067540 0.000000e+00 1676.0
7 TraesCS6D01G092300 chr6A 93.438 640 10 1 1 640 73065787 73066394 0.000000e+00 920.0
8 TraesCS6D01G092300 chr6A 90.754 411 28 4 4193 4593 73070110 73070520 1.630000e-149 540.0
9 TraesCS6D01G092300 chr6A 96.791 187 5 1 1813 1999 73067535 73067720 1.390000e-80 311.0
10 TraesCS6D01G092300 chr6A 83.721 215 27 8 4353 4563 100672263 100672473 4.060000e-46 196.0
11 TraesCS6D01G092300 chr6A 91.406 128 10 1 4353 4479 100648174 100648047 1.900000e-39 174.0
12 TraesCS6D01G092300 chr6A 96.190 105 4 0 1716 1820 444805140 444805244 6.840000e-39 172.0
13 TraesCS6D01G092300 chr6A 81.532 222 26 14 4353 4567 100588413 100588200 8.840000e-38 169.0
14 TraesCS6D01G092300 chr2A 86.921 367 34 8 4770 5135 164609246 164609599 2.880000e-107 399.0
15 TraesCS6D01G092300 chr2A 96.226 106 3 1 1714 1819 619208027 619208131 6.840000e-39 172.0
16 TraesCS6D01G092300 chr2A 88.636 132 15 0 2082 2213 748206663 748206794 1.480000e-35 161.0
17 TraesCS6D01G092300 chr7A 83.168 202 23 5 4289 4480 86073683 86073883 1.900000e-39 174.0
18 TraesCS6D01G092300 chr7A 83.851 161 25 1 4353 4512 634714335 634714175 8.910000e-33 152.0
19 TraesCS6D01G092300 chr3B 90.769 130 12 0 2082 2211 512506209 512506080 1.900000e-39 174.0
20 TraesCS6D01G092300 chr3B 89.394 132 14 0 2082 2213 565445585 565445454 3.180000e-37 167.0
21 TraesCS6D01G092300 chr3B 88.636 132 15 0 2082 2213 672124654 672124523 1.480000e-35 161.0
22 TraesCS6D01G092300 chr1B 96.190 105 4 0 1712 1816 171887308 171887412 6.840000e-39 172.0
23 TraesCS6D01G092300 chr1B 93.103 116 8 0 1705 1820 543023045 543023160 2.460000e-38 171.0
24 TraesCS6D01G092300 chr1D 96.190 105 2 2 1713 1816 298620959 298620856 2.460000e-38 171.0
25 TraesCS6D01G092300 chr1D 95.327 107 4 1 1714 1820 315816901 315817006 8.840000e-38 169.0
26 TraesCS6D01G092300 chr5B 95.327 107 3 2 1720 1826 701174661 701174765 8.840000e-38 169.0
27 TraesCS6D01G092300 chr4B 94.444 108 6 0 1709 1816 186741660 186741767 3.180000e-37 167.0
28 TraesCS6D01G092300 chr4B 89.394 132 14 0 2082 2213 580780119 580780250 3.180000e-37 167.0
29 TraesCS6D01G092300 chr4B 88.636 132 15 0 2082 2213 238957817 238957686 1.480000e-35 161.0
30 TraesCS6D01G092300 chr1A 88.636 132 15 0 2082 2213 50694899 50695030 1.480000e-35 161.0
31 TraesCS6D01G092300 chr7B 85.714 147 18 2 4362 4505 592992115 592991969 8.910000e-33 152.0
32 TraesCS6D01G092300 chr3D 84.106 151 24 0 4354 4504 536788656 536788806 4.140000e-31 147.0
33 TraesCS6D01G092300 chr2B 100.000 32 0 0 4765 4796 481872741 481872772 5.550000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G092300 chr6D 57896877 57902011 5134 False 9483 9483 100.0000 1 5135 1 chr6D.!!$F1 5134
1 TraesCS6D01G092300 chr6B 129852627 129857021 4394 False 3141 5334 93.2875 1 4289 2 chr6B.!!$F1 4288
2 TraesCS6D01G092300 chr6A 73065787 73070520 4733 False 1361 3358 94.0018 1 4593 5 chr6A.!!$F3 4592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
436 437 1.202510 TGTTGTTGCCCATGCTGTTTC 60.203 47.619 0.00 0.00 38.71 2.78 F
2396 2643 0.108233 GTCTCCTTCTCCAGCTGCAG 60.108 60.000 10.11 10.11 0.00 4.41 F
2436 2683 0.460311 CCCGCAGTTACTCTACAGGG 59.540 60.000 0.00 0.00 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2430 2677 0.828762 ACCGTGTGTAGTGCCCTGTA 60.829 55.000 0.0 0.0 0.00 2.74 R
3213 3468 0.179200 GCCATTTTCGTAGCCGTGTG 60.179 55.000 0.0 0.0 35.01 3.82 R
4160 4426 1.267806 GTGAGGACATGTTTGGCAGTG 59.732 52.381 0.0 0.0 29.63 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
324 325 5.305585 TGTCTGTTTATCCTTGTTCAGTCC 58.694 41.667 0.00 0.00 0.00 3.85
334 335 2.561478 TGTTCAGTCCTTAACCTGGC 57.439 50.000 0.00 0.00 0.00 4.85
417 418 6.032094 GCATCTGATGATTTGTTACAGGTTG 58.968 40.000 21.30 0.00 0.00 3.77
436 437 1.202510 TGTTGTTGCCCATGCTGTTTC 60.203 47.619 0.00 0.00 38.71 2.78
451 452 3.724374 CTGTTTCCAGTGTCCGAGTTAA 58.276 45.455 0.00 0.00 33.80 2.01
476 477 2.151502 TGTTGGGTGCCTTTTCAGAA 57.848 45.000 0.00 0.00 0.00 3.02
493 494 6.409524 TTCAGAATCAGGAAAGCAACATTT 57.590 33.333 0.00 0.00 0.00 2.32
582 583 6.429078 TCATGCTTCATCCTATAACATTCAGC 59.571 38.462 0.00 0.00 0.00 4.26
717 791 2.093764 CAGCACTAGAACTTCTCCCCAG 60.094 54.545 0.00 0.00 0.00 4.45
933 1010 1.203237 TATGCTTGCCTGGCTCTGTA 58.797 50.000 21.03 9.54 0.00 2.74
961 1038 8.284945 TGCTAATTATCATCTTCTTGCTTGTT 57.715 30.769 0.00 0.00 0.00 2.83
1098 1175 1.378119 GGTGTTCCCGTTCCCCATC 60.378 63.158 0.00 0.00 0.00 3.51
1107 1184 0.322187 CGTTCCCCATCCCGTTCTTT 60.322 55.000 0.00 0.00 0.00 2.52
1150 1227 3.257393 CAAGACGGTGAGAAGAATCTGG 58.743 50.000 0.00 0.00 35.54 3.86
1203 1280 6.866010 CATGTATGCTAATTGCTAAGTCCA 57.134 37.500 0.00 0.00 43.37 4.02
1204 1281 7.444629 CATGTATGCTAATTGCTAAGTCCAT 57.555 36.000 0.00 0.00 43.37 3.41
1205 1282 7.879070 CATGTATGCTAATTGCTAAGTCCATT 58.121 34.615 0.00 0.00 43.37 3.16
1258 1335 0.663269 CTGTGAACGAGCTGTACGCA 60.663 55.000 11.30 0.00 42.61 5.24
1321 1398 4.821589 GACCCTTGCGAGGAGGCG 62.822 72.222 22.68 7.01 46.74 5.52
1357 1434 1.607612 CCTCGGCCCCAACATAACT 59.392 57.895 0.00 0.00 0.00 2.24
1369 1446 5.331902 CCCAACATAACTGAAATGTTAGCG 58.668 41.667 10.45 0.00 43.84 4.26
1379 1456 5.473504 ACTGAAATGTTAGCGGTTCTTTCAT 59.526 36.000 0.00 0.00 33.58 2.57
1466 1543 1.071605 CAGAGTACTCAAAGGCGTGC 58.928 55.000 24.44 0.00 0.00 5.34
1731 1808 4.723309 TCCTAATTAGTACTCCCTCCGTC 58.277 47.826 11.50 0.00 0.00 4.79
1733 1810 2.378378 ATTAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
1734 1811 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1737 1814 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1740 1817 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1741 1818 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1746 1823 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1749 1826 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
1750 1827 4.154195 CCGTCCCAAAATAAGTGTCTTGAG 59.846 45.833 0.00 0.00 0.00 3.02
1751 1828 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
1752 1829 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
1754 1831 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
1756 1833 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
1757 1834 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
1758 1835 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
1759 1836 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
1761 1838 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
1762 1839 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
1764 1841 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
1765 1842 9.555727 AAGTGTCTTGAGCTTAGTACAAATTTA 57.444 29.630 0.00 0.00 0.00 1.40
1766 1843 9.726438 AGTGTCTTGAGCTTAGTACAAATTTAT 57.274 29.630 0.00 0.00 0.00 1.40
1793 1880 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
1794 1881 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
1797 1884 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
1803 1890 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
1809 1896 4.202377 TGAGACACTTATTTTGGGACGGAA 60.202 41.667 0.00 0.00 0.00 4.30
1862 1949 6.821388 TGGTAGTTTGTGGTTAAATGCATTT 58.179 32.000 26.72 26.72 0.00 2.32
1863 1950 7.275920 TGGTAGTTTGTGGTTAAATGCATTTT 58.724 30.769 28.45 13.50 0.00 1.82
1999 2086 4.965532 ACACAGATACCTCCTTAGCTCATT 59.034 41.667 0.00 0.00 0.00 2.57
2396 2643 0.108233 GTCTCCTTCTCCAGCTGCAG 60.108 60.000 10.11 10.11 0.00 4.41
2430 2677 3.514309 ACTGTAATTCCCGCAGTTACTCT 59.486 43.478 0.00 0.00 40.13 3.24
2436 2683 0.460311 CCCGCAGTTACTCTACAGGG 59.540 60.000 0.00 0.00 0.00 4.45
2452 2699 2.424302 GGCACTACACACGGTGGT 59.576 61.111 13.48 9.90 42.62 4.16
2536 2783 4.432712 CTGCCAGTTTATTAACCATTGCC 58.567 43.478 0.00 0.00 34.71 4.52
2556 2803 1.214367 GTCGTTGTGACCATGTTCGT 58.786 50.000 0.00 0.00 42.04 3.85
2705 2952 6.260050 ACACAGTACAGGTACATGAAAAACAG 59.740 38.462 15.54 6.29 38.48 3.16
2714 2961 6.039616 GGTACATGAAAAACAGTGCTGAAAA 58.960 36.000 0.00 0.00 0.00 2.29
2764 3012 8.526147 ACTTATTCTGATATAAATGCCCATTGC 58.474 33.333 0.00 0.00 41.77 3.56
2806 3054 2.299582 CTGCAAATGACATTGTGGGGAA 59.700 45.455 0.34 0.00 32.80 3.97
2832 3080 0.890683 GGGAGATTGCACAAAGGTGG 59.109 55.000 0.00 0.00 45.38 4.61
2869 3117 6.455647 CACATACACCTCTCAAGAACTACAA 58.544 40.000 0.00 0.00 0.00 2.41
2879 3127 6.582636 TCTCAAGAACTACAACATGTCAAGT 58.417 36.000 0.00 0.00 0.00 3.16
2909 3157 3.629398 CAGATAAGAATGTTCAGTGGGGC 59.371 47.826 0.00 0.00 0.00 5.80
2919 3167 1.434188 TCAGTGGGGCTCAGAAGAAA 58.566 50.000 0.00 0.00 0.00 2.52
2932 3180 2.481952 CAGAAGAAAGCAAACCCTCGAG 59.518 50.000 5.13 5.13 0.00 4.04
2945 3193 1.490574 CCTCGAGGGTCTCCTTCAAT 58.509 55.000 24.62 0.00 45.05 2.57
2999 3247 3.364366 CCAACAACTTCAGCGATGAGAAC 60.364 47.826 2.57 0.00 0.00 3.01
3070 3318 6.294675 CCAGAATGCAAGGTAAATTGAACTGA 60.295 38.462 0.00 0.00 31.55 3.41
3097 3345 7.816640 TGTAGAACTTTCATTCCTAATTGTGC 58.183 34.615 0.00 0.00 0.00 4.57
3099 3347 4.701956 ACTTTCATTCCTAATTGTGCCG 57.298 40.909 0.00 0.00 0.00 5.69
3196 3451 6.065976 TCTTCCCATGATCACATAGTTTGT 57.934 37.500 0.00 0.00 39.91 2.83
3210 3465 2.102578 AGTTTGTGGTGCTGAAGCTTT 58.897 42.857 0.00 0.00 42.66 3.51
3213 3468 1.006922 GTGGTGCTGAAGCTTTGCC 60.007 57.895 18.43 11.69 42.66 4.52
3233 3488 0.321298 ACACGGCTACGAAAATGGCT 60.321 50.000 0.00 0.00 44.60 4.75
3234 3489 1.066716 ACACGGCTACGAAAATGGCTA 60.067 47.619 0.00 0.00 44.60 3.93
3380 3635 3.208594 CACATTGGACGACATGATCCAT 58.791 45.455 15.61 6.69 44.49 3.41
3485 3740 0.750546 TCGAGTACCTCCATGACGGG 60.751 60.000 0.00 0.00 34.36 5.28
3613 3868 2.665185 GTTCGCGCCACCTTCAGT 60.665 61.111 0.00 0.00 0.00 3.41
3614 3869 1.373748 GTTCGCGCCACCTTCAGTA 60.374 57.895 0.00 0.00 0.00 2.74
3638 3893 0.100861 GAGCTACTACGGACTGGCAC 59.899 60.000 0.00 0.00 0.00 5.01
3657 3912 1.514443 GACGACGCACTGAGCTACC 60.514 63.158 0.00 0.00 42.61 3.18
3769 4024 2.472909 GCAGGCCCTACGACAATGC 61.473 63.158 0.00 0.00 0.00 3.56
4160 4426 3.489047 GCTCGCTCTGATTGACATAGAAC 59.511 47.826 0.00 0.00 0.00 3.01
4299 4594 1.074926 ATTTGGTTGGGGTGTGCCA 60.075 52.632 0.00 0.00 36.17 4.92
4305 4600 1.462432 TTGGGGTGTGCCAGGTCTA 60.462 57.895 0.00 0.00 36.17 2.59
4339 4634 1.374252 CCCGGACGACACTTGAAGG 60.374 63.158 0.73 0.00 0.00 3.46
4343 4638 1.371558 GACGACACTTGAAGGCCCT 59.628 57.895 0.00 0.00 0.00 5.19
4348 4643 3.262405 ACGACACTTGAAGGCCCTAATAA 59.738 43.478 0.00 0.00 0.00 1.40
4366 4670 0.701310 AACAAGTGGACCCTTCCCCT 60.701 55.000 0.00 0.00 42.01 4.79
4396 4701 8.956533 AATAAATTTAATACCATTGTGGGCAC 57.043 30.769 1.21 0.00 43.37 5.01
4412 4717 1.473258 GCACTTGGCCCACATATCAA 58.527 50.000 0.00 0.00 36.11 2.57
4499 4804 2.443255 TGAAACTTTGCCCTTCCTCTCT 59.557 45.455 0.00 0.00 0.00 3.10
4514 4819 6.127786 CCTTCCTCTCTTTTTATGGCTTCTTG 60.128 42.308 0.00 0.00 0.00 3.02
4526 4831 1.527433 GCTTCTTGGGCCAACTCCAC 61.527 60.000 16.66 0.05 33.43 4.02
4559 4864 2.356135 CGAGGTGGGATGAAACGAAAT 58.644 47.619 0.00 0.00 0.00 2.17
4593 4898 7.663905 TGCAGTGAGTATTAACAAACCTGTATT 59.336 33.333 0.00 0.00 33.45 1.89
4594 4899 8.512138 GCAGTGAGTATTAACAAACCTGTATTT 58.488 33.333 0.00 0.00 33.45 1.40
4623 4928 8.741101 TTTGAGACAAACAAACATGTATATGC 57.259 30.769 0.00 0.00 37.85 3.14
4624 4929 6.541969 TGAGACAAACAAACATGTATATGCG 58.458 36.000 0.00 0.00 37.85 4.73
4625 4930 6.148645 TGAGACAAACAAACATGTATATGCGT 59.851 34.615 0.00 0.00 37.85 5.24
4626 4931 6.314018 AGACAAACAAACATGTATATGCGTG 58.686 36.000 11.06 11.06 37.85 5.34
4627 4932 6.007936 ACAAACAAACATGTATATGCGTGT 57.992 33.333 12.36 12.36 40.00 4.49
4628 4933 5.855925 ACAAACAAACATGTATATGCGTGTG 59.144 36.000 17.93 9.99 38.47 3.82
4629 4934 4.014847 ACAAACATGTATATGCGTGTGC 57.985 40.909 17.93 0.00 38.47 4.57
4630 4935 3.689161 ACAAACATGTATATGCGTGTGCT 59.311 39.130 17.93 7.19 43.34 4.40
4631 4936 4.873259 ACAAACATGTATATGCGTGTGCTA 59.127 37.500 17.93 0.00 43.34 3.49
4632 4937 5.197549 CAAACATGTATATGCGTGTGCTAC 58.802 41.667 17.93 0.00 43.34 3.58
4633 4938 3.390135 ACATGTATATGCGTGTGCTACC 58.610 45.455 16.71 0.00 43.34 3.18
4634 4939 3.181470 ACATGTATATGCGTGTGCTACCA 60.181 43.478 16.71 0.00 43.34 3.25
4635 4940 2.816689 TGTATATGCGTGTGCTACCAC 58.183 47.619 0.00 0.00 43.34 4.16
4642 4947 3.300711 GTGTGCTACCACGGAAGTT 57.699 52.632 0.00 0.00 46.40 2.66
4643 4948 0.865769 GTGTGCTACCACGGAAGTTG 59.134 55.000 0.00 0.00 46.40 3.16
4644 4949 0.250124 TGTGCTACCACGGAAGTTGG 60.250 55.000 0.00 0.00 46.40 3.77
4645 4950 0.953960 GTGCTACCACGGAAGTTGGG 60.954 60.000 0.00 0.00 46.40 4.12
4646 4951 2.038837 GCTACCACGGAAGTTGGGC 61.039 63.158 0.00 0.00 46.40 5.36
4647 4952 1.376812 CTACCACGGAAGTTGGGCC 60.377 63.158 0.00 0.00 46.40 5.80
4648 4953 1.838073 CTACCACGGAAGTTGGGCCT 61.838 60.000 4.53 0.00 46.40 5.19
4649 4954 2.119484 TACCACGGAAGTTGGGCCTG 62.119 60.000 4.53 0.00 46.40 4.85
4650 4955 2.429930 CACGGAAGTTGGGCCTGA 59.570 61.111 4.53 0.00 46.40 3.86
4651 4956 1.002134 CACGGAAGTTGGGCCTGAT 60.002 57.895 4.53 0.00 46.40 2.90
4652 4957 1.002134 ACGGAAGTTGGGCCTGATG 60.002 57.895 4.53 0.00 46.40 3.07
4653 4958 1.299648 CGGAAGTTGGGCCTGATGA 59.700 57.895 4.53 0.00 0.00 2.92
4654 4959 0.107017 CGGAAGTTGGGCCTGATGAT 60.107 55.000 4.53 0.00 0.00 2.45
4655 4960 1.140852 CGGAAGTTGGGCCTGATGATA 59.859 52.381 4.53 0.00 0.00 2.15
4656 4961 2.421388 CGGAAGTTGGGCCTGATGATAA 60.421 50.000 4.53 0.00 0.00 1.75
4657 4962 3.217626 GGAAGTTGGGCCTGATGATAAG 58.782 50.000 4.53 0.00 0.00 1.73
4658 4963 3.117888 GGAAGTTGGGCCTGATGATAAGA 60.118 47.826 4.53 0.00 0.00 2.10
4659 4964 4.526970 GAAGTTGGGCCTGATGATAAGAA 58.473 43.478 4.53 0.00 0.00 2.52
4660 4965 4.162040 AGTTGGGCCTGATGATAAGAAG 57.838 45.455 4.53 0.00 0.00 2.85
4661 4966 3.525199 AGTTGGGCCTGATGATAAGAAGT 59.475 43.478 4.53 0.00 0.00 3.01
4662 4967 3.845781 TGGGCCTGATGATAAGAAGTC 57.154 47.619 4.53 0.00 0.00 3.01
4663 4968 2.439507 TGGGCCTGATGATAAGAAGTCC 59.560 50.000 4.53 0.00 0.00 3.85
4664 4969 2.439507 GGGCCTGATGATAAGAAGTCCA 59.560 50.000 0.84 0.00 0.00 4.02
4665 4970 3.073650 GGGCCTGATGATAAGAAGTCCAT 59.926 47.826 0.84 0.00 0.00 3.41
4666 4971 4.287067 GGGCCTGATGATAAGAAGTCCATA 59.713 45.833 0.84 0.00 0.00 2.74
4667 4972 5.221925 GGGCCTGATGATAAGAAGTCCATAA 60.222 44.000 0.84 0.00 0.00 1.90
4668 4973 6.299141 GGCCTGATGATAAGAAGTCCATAAA 58.701 40.000 0.00 0.00 0.00 1.40
4669 4974 6.429385 GGCCTGATGATAAGAAGTCCATAAAG 59.571 42.308 0.00 0.00 0.00 1.85
4670 4975 7.220030 GCCTGATGATAAGAAGTCCATAAAGA 58.780 38.462 0.00 0.00 0.00 2.52
4671 4976 7.716998 GCCTGATGATAAGAAGTCCATAAAGAA 59.283 37.037 0.00 0.00 0.00 2.52
4672 4977 9.618890 CCTGATGATAAGAAGTCCATAAAGAAA 57.381 33.333 0.00 0.00 0.00 2.52
4681 4986 8.970859 AGAAGTCCATAAAGAAAGTATGATGG 57.029 34.615 0.00 0.00 36.06 3.51
4682 4987 7.500559 AGAAGTCCATAAAGAAAGTATGATGGC 59.499 37.037 0.00 0.00 34.95 4.40
4683 4988 6.064717 AGTCCATAAAGAAAGTATGATGGCC 58.935 40.000 0.00 0.00 34.95 5.36
4684 4989 5.241728 GTCCATAAAGAAAGTATGATGGCCC 59.758 44.000 0.00 0.00 34.95 5.80
4685 4990 5.103728 TCCATAAAGAAAGTATGATGGCCCA 60.104 40.000 0.00 0.00 34.95 5.36
4686 4991 5.010012 CCATAAAGAAAGTATGATGGCCCAC 59.990 44.000 0.00 0.00 31.71 4.61
4687 4992 3.737559 AAGAAAGTATGATGGCCCACA 57.262 42.857 0.00 0.00 0.00 4.17
4688 4993 3.959495 AGAAAGTATGATGGCCCACAT 57.041 42.857 14.55 14.55 44.18 3.21
4689 4994 3.559069 AGAAAGTATGATGGCCCACATG 58.441 45.455 18.12 0.00 40.72 3.21
4690 4995 2.369983 AAGTATGATGGCCCACATGG 57.630 50.000 18.12 0.00 40.72 3.66
4703 5008 0.961019 CACATGGGTGGAAGTGTTGG 59.039 55.000 0.00 0.00 41.45 3.77
4704 5009 0.555769 ACATGGGTGGAAGTGTTGGT 59.444 50.000 0.00 0.00 0.00 3.67
4705 5010 1.063266 ACATGGGTGGAAGTGTTGGTT 60.063 47.619 0.00 0.00 0.00 3.67
4706 5011 2.038659 CATGGGTGGAAGTGTTGGTTT 58.961 47.619 0.00 0.00 0.00 3.27
4707 5012 2.239681 TGGGTGGAAGTGTTGGTTTT 57.760 45.000 0.00 0.00 0.00 2.43
4708 5013 2.104170 TGGGTGGAAGTGTTGGTTTTC 58.896 47.619 0.00 0.00 0.00 2.29
4709 5014 1.411246 GGGTGGAAGTGTTGGTTTTCC 59.589 52.381 0.00 0.00 40.59 3.13
4710 5015 1.066454 GGTGGAAGTGTTGGTTTTCCG 59.934 52.381 0.00 0.00 42.60 4.30
4711 5016 1.066454 GTGGAAGTGTTGGTTTTCCGG 59.934 52.381 0.00 0.00 42.60 5.14
4712 5017 0.031585 GGAAGTGTTGGTTTTCCGGC 59.968 55.000 0.00 0.00 44.36 6.13
4713 5018 1.029681 GAAGTGTTGGTTTTCCGGCT 58.970 50.000 0.00 0.00 44.36 5.52
4714 5019 2.223745 GAAGTGTTGGTTTTCCGGCTA 58.776 47.619 0.00 0.00 44.36 3.93
4715 5020 1.892209 AGTGTTGGTTTTCCGGCTAG 58.108 50.000 0.00 0.00 44.36 3.42
4716 5021 1.418637 AGTGTTGGTTTTCCGGCTAGA 59.581 47.619 0.00 0.00 44.36 2.43
4717 5022 2.158726 AGTGTTGGTTTTCCGGCTAGAA 60.159 45.455 0.00 0.00 44.36 2.10
4718 5023 2.817844 GTGTTGGTTTTCCGGCTAGAAT 59.182 45.455 0.00 0.00 44.36 2.40
4719 5024 4.004982 GTGTTGGTTTTCCGGCTAGAATA 58.995 43.478 0.00 0.00 44.36 1.75
4720 5025 4.094442 GTGTTGGTTTTCCGGCTAGAATAG 59.906 45.833 0.00 0.00 44.36 1.73
4721 5026 4.259356 GTTGGTTTTCCGGCTAGAATAGT 58.741 43.478 0.00 0.00 41.46 2.12
4722 5027 5.046448 TGTTGGTTTTCCGGCTAGAATAGTA 60.046 40.000 0.00 0.00 41.46 1.82
4723 5028 5.014808 TGGTTTTCCGGCTAGAATAGTAC 57.985 43.478 0.00 0.00 41.46 2.73
4724 5029 4.713321 TGGTTTTCCGGCTAGAATAGTACT 59.287 41.667 0.00 0.00 41.46 2.73
4725 5030 5.893255 TGGTTTTCCGGCTAGAATAGTACTA 59.107 40.000 4.77 4.77 41.46 1.82
4726 5031 6.380846 TGGTTTTCCGGCTAGAATAGTACTAA 59.619 38.462 6.70 0.00 41.46 2.24
4727 5032 6.922407 GGTTTTCCGGCTAGAATAGTACTAAG 59.078 42.308 6.70 0.72 41.93 2.18
4728 5033 7.417229 GGTTTTCCGGCTAGAATAGTACTAAGT 60.417 40.741 6.70 0.00 41.93 2.24
4729 5034 7.651027 TTTCCGGCTAGAATAGTACTAAGTT 57.349 36.000 6.70 0.00 41.93 2.66
4730 5035 6.630444 TCCGGCTAGAATAGTACTAAGTTG 57.370 41.667 6.70 0.00 41.93 3.16
4731 5036 6.125029 TCCGGCTAGAATAGTACTAAGTTGT 58.875 40.000 6.70 0.00 41.93 3.32
4732 5037 7.282585 TCCGGCTAGAATAGTACTAAGTTGTA 58.717 38.462 6.70 0.26 41.93 2.41
4733 5038 7.443575 TCCGGCTAGAATAGTACTAAGTTGTAG 59.556 40.741 6.70 10.59 41.93 2.74
4734 5039 7.308469 CCGGCTAGAATAGTACTAAGTTGTAGG 60.308 44.444 16.35 8.31 41.93 3.18
4735 5040 7.369607 GGCTAGAATAGTACTAAGTTGTAGGC 58.630 42.308 21.12 21.12 41.93 3.93
4736 5041 7.014038 GGCTAGAATAGTACTAAGTTGTAGGCA 59.986 40.741 25.94 0.58 41.93 4.75
4737 5042 8.578151 GCTAGAATAGTACTAAGTTGTAGGCAT 58.422 37.037 16.35 0.00 41.93 4.40
4740 5045 9.819267 AGAATAGTACTAAGTTGTAGGCATTTC 57.181 33.333 6.70 1.72 0.00 2.17
4741 5046 8.959705 AATAGTACTAAGTTGTAGGCATTTCC 57.040 34.615 6.70 0.00 0.00 3.13
4743 5048 7.729124 AGTACTAAGTTGTAGGCATTTCCTA 57.271 36.000 0.00 0.00 45.41 2.94
4751 5056 1.680338 AGGCATTTCCTATTCGGTGC 58.320 50.000 0.00 0.00 45.41 5.01
4752 5057 0.668535 GGCATTTCCTATTCGGTGCC 59.331 55.000 0.00 0.00 42.94 5.01
4753 5058 1.680338 GCATTTCCTATTCGGTGCCT 58.320 50.000 0.00 0.00 0.00 4.75
4754 5059 2.024414 GCATTTCCTATTCGGTGCCTT 58.976 47.619 0.00 0.00 0.00 4.35
4755 5060 2.033424 GCATTTCCTATTCGGTGCCTTC 59.967 50.000 0.00 0.00 0.00 3.46
4756 5061 3.278574 CATTTCCTATTCGGTGCCTTCA 58.721 45.455 0.00 0.00 0.00 3.02
4757 5062 2.691409 TTCCTATTCGGTGCCTTCAG 57.309 50.000 0.00 0.00 0.00 3.02
4758 5063 0.178068 TCCTATTCGGTGCCTTCAGC 59.822 55.000 0.00 0.00 44.14 4.26
4769 5074 2.832672 GCCTTCAGCATTCCTTAACG 57.167 50.000 0.00 0.00 42.97 3.18
4770 5075 2.084546 GCCTTCAGCATTCCTTAACGT 58.915 47.619 0.00 0.00 42.97 3.99
4771 5076 2.159517 GCCTTCAGCATTCCTTAACGTG 60.160 50.000 0.00 0.00 42.97 4.49
4772 5077 2.159517 CCTTCAGCATTCCTTAACGTGC 60.160 50.000 0.00 0.00 37.84 5.34
4773 5078 2.177394 TCAGCATTCCTTAACGTGCA 57.823 45.000 0.00 0.00 39.94 4.57
4774 5079 2.710377 TCAGCATTCCTTAACGTGCAT 58.290 42.857 0.00 0.00 39.94 3.96
4775 5080 3.081061 TCAGCATTCCTTAACGTGCATT 58.919 40.909 0.00 0.00 39.94 3.56
4776 5081 3.505680 TCAGCATTCCTTAACGTGCATTT 59.494 39.130 0.00 0.00 39.94 2.32
4777 5082 3.853671 CAGCATTCCTTAACGTGCATTTC 59.146 43.478 0.00 0.00 39.94 2.17
4778 5083 2.845967 GCATTCCTTAACGTGCATTTCG 59.154 45.455 0.00 0.00 37.52 3.46
4779 5084 3.669557 GCATTCCTTAACGTGCATTTCGT 60.670 43.478 0.00 0.00 43.45 3.85
4786 5091 2.961522 ACGTGCATTTCGTTAACTGG 57.038 45.000 3.71 0.00 38.38 4.00
4787 5092 1.069500 ACGTGCATTTCGTTAACTGGC 60.069 47.619 3.71 1.02 38.38 4.85
4788 5093 1.602191 GTGCATTTCGTTAACTGGCG 58.398 50.000 3.71 0.00 0.00 5.69
4789 5094 0.109964 TGCATTTCGTTAACTGGCGC 60.110 50.000 0.00 0.00 0.00 6.53
4790 5095 0.168128 GCATTTCGTTAACTGGCGCT 59.832 50.000 7.64 0.00 0.00 5.92
4791 5096 1.882198 CATTTCGTTAACTGGCGCTG 58.118 50.000 7.64 2.99 0.00 5.18
4792 5097 1.463056 CATTTCGTTAACTGGCGCTGA 59.537 47.619 7.64 0.00 0.00 4.26
4793 5098 1.584175 TTTCGTTAACTGGCGCTGAA 58.416 45.000 7.64 0.00 0.00 3.02
4794 5099 1.144969 TTCGTTAACTGGCGCTGAAG 58.855 50.000 7.64 5.49 0.00 3.02
4795 5100 0.669318 TCGTTAACTGGCGCTGAAGG 60.669 55.000 7.64 0.77 0.00 3.46
4796 5101 1.502190 GTTAACTGGCGCTGAAGGC 59.498 57.895 7.64 0.00 37.64 4.35
4806 5111 3.145228 GCTGAAGGCGCTCTTAACT 57.855 52.632 7.64 0.00 35.50 2.24
4807 5112 0.723981 GCTGAAGGCGCTCTTAACTG 59.276 55.000 7.64 4.01 35.50 3.16
4808 5113 1.363744 CTGAAGGCGCTCTTAACTGG 58.636 55.000 7.64 0.00 35.50 4.00
4809 5114 0.036388 TGAAGGCGCTCTTAACTGGG 60.036 55.000 7.64 0.00 35.50 4.45
4810 5115 1.369839 GAAGGCGCTCTTAACTGGGC 61.370 60.000 7.64 0.00 40.67 5.36
4812 5117 2.824489 GCGCTCTTAACTGGGCCC 60.824 66.667 17.59 17.59 36.35 5.80
4813 5118 2.511600 CGCTCTTAACTGGGCCCG 60.512 66.667 19.37 14.85 0.00 6.13
4814 5119 2.824489 GCTCTTAACTGGGCCCGC 60.824 66.667 19.37 7.92 0.00 6.13
4815 5120 2.124695 CTCTTAACTGGGCCCGCC 60.125 66.667 19.37 0.00 0.00 6.13
4825 5130 2.987125 GGCCCGCCCATATACGAT 59.013 61.111 0.00 0.00 0.00 3.73
4826 5131 1.298667 GGCCCGCCCATATACGATT 59.701 57.895 0.00 0.00 0.00 3.34
4827 5132 0.322187 GGCCCGCCCATATACGATTT 60.322 55.000 0.00 0.00 0.00 2.17
4828 5133 0.802494 GCCCGCCCATATACGATTTG 59.198 55.000 0.00 0.00 0.00 2.32
4829 5134 1.609580 GCCCGCCCATATACGATTTGA 60.610 52.381 0.00 0.00 0.00 2.69
4830 5135 2.939640 GCCCGCCCATATACGATTTGAT 60.940 50.000 0.00 0.00 0.00 2.57
4831 5136 3.343617 CCCGCCCATATACGATTTGATT 58.656 45.455 0.00 0.00 0.00 2.57
4832 5137 3.756434 CCCGCCCATATACGATTTGATTT 59.244 43.478 0.00 0.00 0.00 2.17
4833 5138 4.217550 CCCGCCCATATACGATTTGATTTT 59.782 41.667 0.00 0.00 0.00 1.82
4834 5139 5.153513 CCGCCCATATACGATTTGATTTTG 58.846 41.667 0.00 0.00 0.00 2.44
4835 5140 5.049060 CCGCCCATATACGATTTGATTTTGA 60.049 40.000 0.00 0.00 0.00 2.69
4836 5141 6.079763 CGCCCATATACGATTTGATTTTGAG 58.920 40.000 0.00 0.00 0.00 3.02
4837 5142 6.293407 CGCCCATATACGATTTGATTTTGAGT 60.293 38.462 0.00 0.00 0.00 3.41
4838 5143 7.095397 CGCCCATATACGATTTGATTTTGAGTA 60.095 37.037 0.00 0.00 0.00 2.59
4839 5144 8.564574 GCCCATATACGATTTGATTTTGAGTAA 58.435 33.333 0.00 0.00 0.00 2.24
4845 5150 6.909909 ACGATTTGATTTTGAGTAAACTCCC 58.090 36.000 7.63 0.00 42.20 4.30
4846 5151 6.488683 ACGATTTGATTTTGAGTAAACTCCCA 59.511 34.615 7.63 0.00 42.20 4.37
4847 5152 7.013846 ACGATTTGATTTTGAGTAAACTCCCAA 59.986 33.333 7.63 1.32 42.20 4.12
4848 5153 7.865385 CGATTTGATTTTGAGTAAACTCCCAAA 59.135 33.333 7.63 7.21 42.20 3.28
4849 5154 9.541143 GATTTGATTTTGAGTAAACTCCCAAAA 57.459 29.630 7.63 9.25 42.20 2.44
4850 5155 9.898152 ATTTGATTTTGAGTAAACTCCCAAAAA 57.102 25.926 7.63 8.10 42.20 1.94
4867 5172 2.138596 AAAAATGCGCAGAACACAGG 57.861 45.000 18.32 0.00 0.00 4.00
4868 5173 0.318955 AAAATGCGCAGAACACAGGC 60.319 50.000 18.32 0.00 0.00 4.85
4869 5174 1.454572 AAATGCGCAGAACACAGGCA 61.455 50.000 18.32 0.00 38.09 4.75
4870 5175 1.246056 AATGCGCAGAACACAGGCAT 61.246 50.000 18.32 0.00 45.49 4.40
4871 5176 1.246056 ATGCGCAGAACACAGGCATT 61.246 50.000 18.32 0.00 41.19 3.56
4872 5177 1.443194 GCGCAGAACACAGGCATTG 60.443 57.895 0.30 0.00 0.00 2.82
4873 5178 1.855213 GCGCAGAACACAGGCATTGA 61.855 55.000 0.30 0.00 0.00 2.57
4874 5179 0.592637 CGCAGAACACAGGCATTGAA 59.407 50.000 0.00 0.00 0.00 2.69
4875 5180 1.664016 CGCAGAACACAGGCATTGAAC 60.664 52.381 0.00 0.00 0.00 3.18
4876 5181 1.336240 GCAGAACACAGGCATTGAACC 60.336 52.381 0.00 0.00 0.00 3.62
4877 5182 1.270550 CAGAACACAGGCATTGAACCC 59.729 52.381 0.00 0.00 0.00 4.11
4878 5183 0.240945 GAACACAGGCATTGAACCCG 59.759 55.000 0.00 0.00 0.00 5.28
4879 5184 0.467290 AACACAGGCATTGAACCCGT 60.467 50.000 0.00 0.00 0.00 5.28
4880 5185 1.172180 ACACAGGCATTGAACCCGTG 61.172 55.000 0.00 0.00 34.29 4.94
4881 5186 0.888736 CACAGGCATTGAACCCGTGA 60.889 55.000 0.00 0.00 31.74 4.35
4882 5187 0.038166 ACAGGCATTGAACCCGTGAT 59.962 50.000 0.00 0.00 0.00 3.06
4883 5188 0.734889 CAGGCATTGAACCCGTGATC 59.265 55.000 0.00 0.00 0.00 2.92
4884 5189 0.620556 AGGCATTGAACCCGTGATCT 59.379 50.000 0.00 0.00 0.00 2.75
4885 5190 1.017387 GGCATTGAACCCGTGATCTC 58.983 55.000 0.00 0.00 0.00 2.75
4886 5191 1.407437 GGCATTGAACCCGTGATCTCT 60.407 52.381 0.00 0.00 0.00 3.10
4887 5192 1.667724 GCATTGAACCCGTGATCTCTG 59.332 52.381 0.00 0.00 0.00 3.35
4888 5193 1.667724 CATTGAACCCGTGATCTCTGC 59.332 52.381 0.00 0.00 0.00 4.26
4889 5194 0.389817 TTGAACCCGTGATCTCTGCG 60.390 55.000 0.00 0.00 0.00 5.18
4890 5195 1.215647 GAACCCGTGATCTCTGCGT 59.784 57.895 0.00 0.00 0.00 5.24
4891 5196 0.454600 GAACCCGTGATCTCTGCGTA 59.545 55.000 0.00 0.00 0.00 4.42
4892 5197 0.172803 AACCCGTGATCTCTGCGTAC 59.827 55.000 0.00 0.00 0.00 3.67
4893 5198 1.298413 CCCGTGATCTCTGCGTACG 60.298 63.158 11.84 11.84 34.78 3.67
4894 5199 1.428219 CCGTGATCTCTGCGTACGT 59.572 57.895 17.90 0.00 33.28 3.57
4895 5200 0.654160 CCGTGATCTCTGCGTACGTA 59.346 55.000 17.90 12.02 33.28 3.57
4896 5201 1.594034 CCGTGATCTCTGCGTACGTAC 60.594 57.143 17.90 15.90 33.28 3.67
4907 5212 3.005823 GTACGTACGAAAGAGCGCA 57.994 52.632 24.41 0.00 35.88 6.09
4908 5213 1.330306 GTACGTACGAAAGAGCGCAA 58.670 50.000 24.41 0.00 35.88 4.85
4909 5214 1.715519 GTACGTACGAAAGAGCGCAAA 59.284 47.619 24.41 0.00 35.88 3.68
4910 5215 0.505655 ACGTACGAAAGAGCGCAAAC 59.494 50.000 24.41 0.00 35.88 2.93
4911 5216 0.179258 CGTACGAAAGAGCGCAAACC 60.179 55.000 10.44 0.00 33.86 3.27
4912 5217 0.863144 GTACGAAAGAGCGCAAACCA 59.137 50.000 11.47 0.00 33.86 3.67
4913 5218 0.863144 TACGAAAGAGCGCAAACCAC 59.137 50.000 11.47 0.00 33.86 4.16
4914 5219 0.814010 ACGAAAGAGCGCAAACCACT 60.814 50.000 11.47 0.00 33.86 4.00
4915 5220 1.144969 CGAAAGAGCGCAAACCACTA 58.855 50.000 11.47 0.00 0.00 2.74
4916 5221 1.136336 CGAAAGAGCGCAAACCACTAC 60.136 52.381 11.47 0.00 0.00 2.73
4917 5222 0.865769 AAAGAGCGCAAACCACTACG 59.134 50.000 11.47 0.00 0.00 3.51
4923 5228 1.635844 CGCAAACCACTACGCTATCA 58.364 50.000 0.00 0.00 0.00 2.15
4924 5229 2.201732 CGCAAACCACTACGCTATCAT 58.798 47.619 0.00 0.00 0.00 2.45
4925 5230 3.377439 CGCAAACCACTACGCTATCATA 58.623 45.455 0.00 0.00 0.00 2.15
4926 5231 3.181774 CGCAAACCACTACGCTATCATAC 59.818 47.826 0.00 0.00 0.00 2.39
4927 5232 3.493503 GCAAACCACTACGCTATCATACC 59.506 47.826 0.00 0.00 0.00 2.73
4928 5233 4.739735 GCAAACCACTACGCTATCATACCT 60.740 45.833 0.00 0.00 0.00 3.08
4929 5234 4.585955 AACCACTACGCTATCATACCTG 57.414 45.455 0.00 0.00 0.00 4.00
4930 5235 3.828921 ACCACTACGCTATCATACCTGA 58.171 45.455 0.00 0.00 35.41 3.86
4931 5236 4.408276 ACCACTACGCTATCATACCTGAT 58.592 43.478 0.00 0.00 44.39 2.90
4932 5237 4.459685 ACCACTACGCTATCATACCTGATC 59.540 45.833 0.00 0.00 41.29 2.92
4933 5238 4.702612 CCACTACGCTATCATACCTGATCT 59.297 45.833 0.00 0.00 41.29 2.75
4934 5239 5.392487 CCACTACGCTATCATACCTGATCTG 60.392 48.000 0.00 0.00 41.29 2.90
4935 5240 5.412904 CACTACGCTATCATACCTGATCTGA 59.587 44.000 0.38 0.00 41.29 3.27
4936 5241 6.004574 ACTACGCTATCATACCTGATCTGAA 58.995 40.000 0.38 0.00 41.29 3.02
4937 5242 5.127693 ACGCTATCATACCTGATCTGAAC 57.872 43.478 0.38 0.00 41.29 3.18
4938 5243 4.584743 ACGCTATCATACCTGATCTGAACA 59.415 41.667 0.38 0.00 41.29 3.18
4939 5244 5.069119 ACGCTATCATACCTGATCTGAACAA 59.931 40.000 0.38 0.00 41.29 2.83
4940 5245 5.985530 CGCTATCATACCTGATCTGAACAAA 59.014 40.000 0.38 0.00 41.29 2.83
4941 5246 6.648310 CGCTATCATACCTGATCTGAACAAAT 59.352 38.462 0.38 0.00 41.29 2.32
4942 5247 7.172190 CGCTATCATACCTGATCTGAACAAATT 59.828 37.037 0.38 0.00 41.29 1.82
4943 5248 8.288208 GCTATCATACCTGATCTGAACAAATTG 58.712 37.037 0.38 0.00 41.29 2.32
4944 5249 9.551734 CTATCATACCTGATCTGAACAAATTGA 57.448 33.333 0.00 0.00 41.29 2.57
4945 5250 8.991783 ATCATACCTGATCTGAACAAATTGAT 57.008 30.769 0.00 0.00 37.58 2.57
4946 5251 8.812513 TCATACCTGATCTGAACAAATTGATT 57.187 30.769 0.00 0.00 0.00 2.57
4947 5252 9.246670 TCATACCTGATCTGAACAAATTGATTT 57.753 29.630 0.00 0.00 0.00 2.17
4948 5253 9.865321 CATACCTGATCTGAACAAATTGATTTT 57.135 29.630 0.00 0.00 0.00 1.82
4950 5255 8.597662 ACCTGATCTGAACAAATTGATTTTTG 57.402 30.769 0.00 0.00 41.37 2.44
4982 5287 9.567848 TTTATTTATTTTCTTCCATTCGTGAGC 57.432 29.630 0.00 0.00 0.00 4.26
4983 5288 6.817765 TTTATTTTCTTCCATTCGTGAGCT 57.182 33.333 0.00 0.00 0.00 4.09
4984 5289 6.817765 TTATTTTCTTCCATTCGTGAGCTT 57.182 33.333 0.00 0.00 0.00 3.74
4985 5290 5.712152 ATTTTCTTCCATTCGTGAGCTTT 57.288 34.783 0.00 0.00 0.00 3.51
4986 5291 5.514274 TTTTCTTCCATTCGTGAGCTTTT 57.486 34.783 0.00 0.00 0.00 2.27
4987 5292 5.514274 TTTCTTCCATTCGTGAGCTTTTT 57.486 34.783 0.00 0.00 0.00 1.94
5015 5320 9.647797 AGACGTTTTTATTTGGTTTTCTTTCTT 57.352 25.926 0.00 0.00 0.00 2.52
5016 5321 9.895894 GACGTTTTTATTTGGTTTTCTTTCTTC 57.104 29.630 0.00 0.00 0.00 2.87
5017 5322 9.647797 ACGTTTTTATTTGGTTTTCTTTCTTCT 57.352 25.926 0.00 0.00 0.00 2.85
5026 5331 9.639601 TTTGGTTTTCTTTCTTCTTTCTTTCTC 57.360 29.630 0.00 0.00 0.00 2.87
5027 5332 7.772166 TGGTTTTCTTTCTTCTTTCTTTCTCC 58.228 34.615 0.00 0.00 0.00 3.71
5028 5333 7.615757 TGGTTTTCTTTCTTCTTTCTTTCTCCT 59.384 33.333 0.00 0.00 0.00 3.69
5029 5334 8.470805 GGTTTTCTTTCTTCTTTCTTTCTCCTT 58.529 33.333 0.00 0.00 0.00 3.36
5030 5335 9.862371 GTTTTCTTTCTTCTTTCTTTCTCCTTT 57.138 29.630 0.00 0.00 0.00 3.11
5034 5339 9.467796 TCTTTCTTCTTTCTTTCTCCTTTTTCT 57.532 29.630 0.00 0.00 0.00 2.52
5040 5345 8.911247 TCTTTCTTTCTCCTTTTTCTTTTTCG 57.089 30.769 0.00 0.00 0.00 3.46
5041 5346 8.520351 TCTTTCTTTCTCCTTTTTCTTTTTCGT 58.480 29.630 0.00 0.00 0.00 3.85
5042 5347 9.783256 CTTTCTTTCTCCTTTTTCTTTTTCGTA 57.217 29.630 0.00 0.00 0.00 3.43
5043 5348 9.563898 TTTCTTTCTCCTTTTTCTTTTTCGTAC 57.436 29.630 0.00 0.00 0.00 3.67
5044 5349 8.271312 TCTTTCTCCTTTTTCTTTTTCGTACA 57.729 30.769 0.00 0.00 0.00 2.90
5045 5350 8.732531 TCTTTCTCCTTTTTCTTTTTCGTACAA 58.267 29.630 0.00 0.00 0.00 2.41
5046 5351 9.516314 CTTTCTCCTTTTTCTTTTTCGTACAAT 57.484 29.630 0.00 0.00 0.00 2.71
5047 5352 8.850454 TTCTCCTTTTTCTTTTTCGTACAATG 57.150 30.769 0.00 0.00 0.00 2.82
5048 5353 6.915843 TCTCCTTTTTCTTTTTCGTACAATGC 59.084 34.615 0.00 0.00 0.00 3.56
5049 5354 5.683743 TCCTTTTTCTTTTTCGTACAATGCG 59.316 36.000 0.00 0.00 0.00 4.73
5050 5355 5.457473 CCTTTTTCTTTTTCGTACAATGCGT 59.543 36.000 0.00 0.00 0.00 5.24
5051 5356 5.858159 TTTTCTTTTTCGTACAATGCGTG 57.142 34.783 0.00 0.00 0.00 5.34
5052 5357 3.529634 TCTTTTTCGTACAATGCGTGG 57.470 42.857 0.00 0.00 0.00 4.94
5053 5358 3.132160 TCTTTTTCGTACAATGCGTGGA 58.868 40.909 0.00 0.00 0.00 4.02
5054 5359 3.749088 TCTTTTTCGTACAATGCGTGGAT 59.251 39.130 0.00 0.00 0.00 3.41
5055 5360 4.214545 TCTTTTTCGTACAATGCGTGGATT 59.785 37.500 0.00 0.00 0.00 3.01
5056 5361 3.733024 TTTCGTACAATGCGTGGATTC 57.267 42.857 0.00 0.00 0.00 2.52
5057 5362 2.665649 TCGTACAATGCGTGGATTCT 57.334 45.000 0.00 0.00 0.00 2.40
5058 5363 2.967362 TCGTACAATGCGTGGATTCTT 58.033 42.857 0.00 0.00 0.00 2.52
5059 5364 3.331150 TCGTACAATGCGTGGATTCTTT 58.669 40.909 0.00 0.00 0.00 2.52
5060 5365 3.749088 TCGTACAATGCGTGGATTCTTTT 59.251 39.130 0.00 0.00 0.00 2.27
5061 5366 4.088648 CGTACAATGCGTGGATTCTTTTC 58.911 43.478 0.00 0.00 0.00 2.29
5062 5367 4.377943 CGTACAATGCGTGGATTCTTTTCA 60.378 41.667 0.00 0.00 0.00 2.69
5063 5368 4.582701 ACAATGCGTGGATTCTTTTCAA 57.417 36.364 0.00 0.00 0.00 2.69
5064 5369 4.942852 ACAATGCGTGGATTCTTTTCAAA 58.057 34.783 0.00 0.00 0.00 2.69
5065 5370 5.540911 ACAATGCGTGGATTCTTTTCAAAT 58.459 33.333 0.00 0.00 0.00 2.32
5066 5371 5.990996 ACAATGCGTGGATTCTTTTCAAATT 59.009 32.000 0.00 0.00 0.00 1.82
5067 5372 6.146021 ACAATGCGTGGATTCTTTTCAAATTC 59.854 34.615 0.00 0.00 0.00 2.17
5068 5373 5.193663 TGCGTGGATTCTTTTCAAATTCA 57.806 34.783 0.00 0.00 0.00 2.57
5069 5374 5.782047 TGCGTGGATTCTTTTCAAATTCAT 58.218 33.333 0.00 0.00 0.00 2.57
5070 5375 6.222389 TGCGTGGATTCTTTTCAAATTCATT 58.778 32.000 0.00 0.00 0.00 2.57
5071 5376 7.374272 TGCGTGGATTCTTTTCAAATTCATTA 58.626 30.769 0.00 0.00 0.00 1.90
5072 5377 7.869937 TGCGTGGATTCTTTTCAAATTCATTAA 59.130 29.630 0.00 0.00 0.00 1.40
5073 5378 8.162245 GCGTGGATTCTTTTCAAATTCATTAAC 58.838 33.333 0.00 0.00 0.00 2.01
5074 5379 9.410556 CGTGGATTCTTTTCAAATTCATTAACT 57.589 29.630 0.00 0.00 0.00 2.24
5096 5401 7.930513 ACTTTTTCTTCAAAATCGATGAACC 57.069 32.000 0.00 0.00 33.73 3.62
5097 5402 7.716612 ACTTTTTCTTCAAAATCGATGAACCT 58.283 30.769 0.00 0.00 33.73 3.50
5098 5403 8.197439 ACTTTTTCTTCAAAATCGATGAACCTT 58.803 29.630 0.00 0.00 33.73 3.50
5099 5404 8.940768 TTTTTCTTCAAAATCGATGAACCTTT 57.059 26.923 0.00 0.00 33.47 3.11
5100 5405 8.940768 TTTTCTTCAAAATCGATGAACCTTTT 57.059 26.923 0.00 0.00 33.47 2.27
5101 5406 8.940768 TTTCTTCAAAATCGATGAACCTTTTT 57.059 26.923 0.00 0.00 33.47 1.94
5102 5407 8.574196 TTCTTCAAAATCGATGAACCTTTTTC 57.426 30.769 0.00 0.00 33.47 2.29
5103 5408 7.145323 TCTTCAAAATCGATGAACCTTTTTCC 58.855 34.615 0.00 0.00 33.47 3.13
5104 5409 6.398234 TCAAAATCGATGAACCTTTTTCCA 57.602 33.333 0.00 0.00 0.00 3.53
5105 5410 6.810911 TCAAAATCGATGAACCTTTTTCCAA 58.189 32.000 0.00 0.00 0.00 3.53
5106 5411 7.268586 TCAAAATCGATGAACCTTTTTCCAAA 58.731 30.769 0.00 0.00 0.00 3.28
5107 5412 7.766278 TCAAAATCGATGAACCTTTTTCCAAAA 59.234 29.630 0.00 0.00 0.00 2.44
5108 5413 7.477144 AAATCGATGAACCTTTTTCCAAAAC 57.523 32.000 0.00 0.00 0.00 2.43
5109 5414 5.584253 TCGATGAACCTTTTTCCAAAACA 57.416 34.783 0.00 0.00 0.00 2.83
5110 5415 5.344884 TCGATGAACCTTTTTCCAAAACAC 58.655 37.500 0.00 0.00 0.00 3.32
5111 5416 5.105716 TCGATGAACCTTTTTCCAAAACACA 60.106 36.000 0.00 0.00 0.00 3.72
5112 5417 5.752955 CGATGAACCTTTTTCCAAAACACAT 59.247 36.000 0.00 0.00 0.00 3.21
5113 5418 6.292274 CGATGAACCTTTTTCCAAAACACATG 60.292 38.462 0.00 0.00 0.00 3.21
5114 5419 6.042638 TGAACCTTTTTCCAAAACACATGA 57.957 33.333 0.00 0.00 0.00 3.07
5115 5420 6.467677 TGAACCTTTTTCCAAAACACATGAA 58.532 32.000 0.00 0.00 0.00 2.57
5116 5421 6.936900 TGAACCTTTTTCCAAAACACATGAAA 59.063 30.769 0.00 0.00 0.00 2.69
5117 5422 7.609532 TGAACCTTTTTCCAAAACACATGAAAT 59.390 29.630 0.00 0.00 0.00 2.17
5118 5423 7.936496 ACCTTTTTCCAAAACACATGAAATT 57.064 28.000 0.00 0.00 0.00 1.82
5119 5424 8.347004 ACCTTTTTCCAAAACACATGAAATTT 57.653 26.923 0.00 0.00 0.00 1.82
5120 5425 8.801299 ACCTTTTTCCAAAACACATGAAATTTT 58.199 25.926 0.00 0.03 0.00 1.82
5126 5431 9.534565 TTCCAAAACACATGAAATTTTATTCGA 57.465 25.926 0.00 0.00 31.80 3.71
5127 5432 9.534565 TCCAAAACACATGAAATTTTATTCGAA 57.465 25.926 0.00 0.00 31.80 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
324 325 1.617850 TGCAAACATGGCCAGGTTAAG 59.382 47.619 33.90 27.99 33.87 1.85
334 335 0.604073 TGATGTGGCTGCAAACATGG 59.396 50.000 20.53 0.00 37.15 3.66
417 418 1.501169 GAAACAGCATGGGCAACAAC 58.499 50.000 0.00 0.00 43.62 3.32
436 437 4.274950 ACAAAACATTAACTCGGACACTGG 59.725 41.667 0.00 0.00 0.00 4.00
451 452 3.054802 TGAAAAGGCACCCAACAAAACAT 60.055 39.130 0.00 0.00 0.00 2.71
476 477 7.177216 TGACAAGATAAATGTTGCTTTCCTGAT 59.823 33.333 0.10 0.00 34.72 2.90
493 494 7.984422 AATGTGACTTGAACATGACAAGATA 57.016 32.000 28.84 19.42 44.92 1.98
582 583 5.009110 TGTCTCGCTTACAAGATGAGGATAG 59.991 44.000 10.10 0.00 33.50 2.08
694 768 1.552792 GGGAGAAGTTCTAGTGCTGCT 59.447 52.381 5.09 0.00 0.00 4.24
717 791 4.410492 AACGAAATCAGACAAGCATGAC 57.590 40.909 0.00 0.00 0.00 3.06
760 834 4.732285 TTCTTGCGTTTCTTGAGACATC 57.268 40.909 0.00 0.00 0.00 3.06
933 1010 6.297582 AGCAAGAAGATGATAATTAGCAGCT 58.702 36.000 15.35 15.35 40.37 4.24
961 1038 3.898509 GCAACACTGGCGGCAACA 61.899 61.111 14.48 0.00 0.00 3.33
1098 1175 1.977009 GGAAGGGGCAAAGAACGGG 60.977 63.158 0.00 0.00 0.00 5.28
1107 1184 1.765074 GTTGGTGTAGGAAGGGGCA 59.235 57.895 0.00 0.00 0.00 5.36
1150 1227 5.741040 CACTGCAAGACTCAGAAAAGTTTTC 59.259 40.000 18.77 18.77 37.43 2.29
1357 1434 5.957842 ATGAAAGAACCGCTAACATTTCA 57.042 34.783 0.00 0.00 39.96 2.69
1369 1446 6.650120 TGGTACCAGAGATTATGAAAGAACC 58.350 40.000 11.60 0.00 0.00 3.62
1379 1456 2.628178 CTCGGCATGGTACCAGAGATTA 59.372 50.000 21.41 3.27 32.85 1.75
1466 1543 1.202359 GCTCAGCTTCCCTTCTAGACG 60.202 57.143 0.00 0.00 0.00 4.18
1731 1808 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
1733 1810 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
1734 1811 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
1737 1814 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
1740 1817 9.726438 ATAAATTTGTACTAAGCTCAAGACACT 57.274 29.630 0.00 0.00 0.00 3.55
1766 1843 9.239551 TGTCTCAACTTTGTACTAGCTCTAATA 57.760 33.333 0.00 0.00 0.00 0.98
1767 1844 8.030106 GTGTCTCAACTTTGTACTAGCTCTAAT 58.970 37.037 0.00 0.00 0.00 1.73
1768 1845 7.230913 AGTGTCTCAACTTTGTACTAGCTCTAA 59.769 37.037 0.00 0.00 0.00 2.10
1771 1848 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
1772 1849 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
1773 1850 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
1776 1853 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
1777 1854 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
1779 1856 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
1780 1857 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
1782 1859 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
1784 1861 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
1785 1862 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1786 1863 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1793 1880 3.951663 ACTCCTTCCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
1794 1881 4.533311 AGTACTCCTTCCGTCCCAAAATAA 59.467 41.667 0.00 0.00 0.00 1.40
1797 1884 2.332117 AGTACTCCTTCCGTCCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
1800 1887 2.662866 CATAGTACTCCTTCCGTCCCA 58.337 52.381 0.00 0.00 0.00 4.37
1801 1888 1.340568 GCATAGTACTCCTTCCGTCCC 59.659 57.143 0.00 0.00 0.00 4.46
1803 1890 2.688958 ACTGCATAGTACTCCTTCCGTC 59.311 50.000 0.00 0.00 34.74 4.79
1809 1896 5.947663 AGAGTATCACTGCATAGTACTCCT 58.052 41.667 17.73 8.57 39.34 3.69
2019 2266 4.673580 GCACGTTATCTCGTCAAGGAGTAA 60.674 45.833 0.00 0.00 42.27 2.24
2396 2643 5.696724 CGGGAATTACAGTAATGTGAGGATC 59.303 44.000 5.98 0.00 0.00 3.36
2430 2677 0.828762 ACCGTGTGTAGTGCCCTGTA 60.829 55.000 0.00 0.00 0.00 2.74
2436 2683 1.959226 CCACCACCGTGTGTAGTGC 60.959 63.158 0.00 0.00 38.41 4.40
2536 2783 0.160813 CGAACATGGTCACAACGACG 59.839 55.000 12.13 0.00 46.42 5.12
2556 2803 3.818787 GCCGCCGTCTCGAGGTTA 61.819 66.667 13.56 0.00 0.00 2.85
2764 3012 5.107607 GCAGCAACTTCAATGATCAAAACAG 60.108 40.000 0.00 0.00 0.00 3.16
2806 3054 1.296715 GTGCAATCTCCCGGAGTGT 59.703 57.895 14.36 2.01 41.49 3.55
2812 3060 0.523072 CACCTTTGTGCAATCTCCCG 59.477 55.000 0.00 0.00 35.31 5.14
2832 3080 0.584876 GTATGTGCCGATAAACCCGC 59.415 55.000 0.00 0.00 0.00 6.13
2869 3117 9.725019 TCTTATCTGAAACAATACTTGACATGT 57.275 29.630 0.00 0.00 0.00 3.21
2909 3157 2.481952 CGAGGGTTTGCTTTCTTCTGAG 59.518 50.000 0.00 0.00 0.00 3.35
2932 3180 4.457257 CAGTGAAGAAATTGAAGGAGACCC 59.543 45.833 0.00 0.00 0.00 4.46
2936 3184 5.218139 GCAACAGTGAAGAAATTGAAGGAG 58.782 41.667 0.00 0.00 0.00 3.69
2945 3193 3.251729 GCAGAGATGCAACAGTGAAGAAA 59.748 43.478 0.00 0.00 34.41 2.52
2983 3231 3.993081 CAGAAAGTTCTCATCGCTGAAGT 59.007 43.478 0.00 0.00 34.74 3.01
3020 3268 4.384056 GCTCTGCTAGATAGATTTTGCCA 58.616 43.478 0.00 0.00 0.00 4.92
3196 3451 1.455402 TGGCAAAGCTTCAGCACCA 60.455 52.632 21.03 12.26 45.16 4.17
3213 3468 0.179200 GCCATTTTCGTAGCCGTGTG 60.179 55.000 0.00 0.00 35.01 3.82
3233 3488 4.523173 ACATTCTCCAGAAACTCGTCAGTA 59.477 41.667 0.00 0.00 37.61 2.74
3234 3489 3.322254 ACATTCTCCAGAAACTCGTCAGT 59.678 43.478 0.00 0.00 37.61 3.41
3496 3751 4.530857 CGGCGACATGTCCCTCCC 62.531 72.222 20.03 13.42 0.00 4.30
3524 3779 2.123428 ATGCTCCGGCCTGAAATGC 61.123 57.895 0.00 0.00 37.74 3.56
3608 3863 4.135306 CCGTAGTAGCTCCTGATACTGAA 58.865 47.826 0.00 0.00 44.10 3.02
3613 3868 3.496337 CCAGTCCGTAGTAGCTCCTGATA 60.496 52.174 0.00 0.00 0.00 2.15
3614 3869 2.577700 CAGTCCGTAGTAGCTCCTGAT 58.422 52.381 0.00 0.00 0.00 2.90
4123 4388 1.333258 GCGAGCAGTTCACACAAGTTC 60.333 52.381 0.00 0.00 0.00 3.01
4160 4426 1.267806 GTGAGGACATGTTTGGCAGTG 59.732 52.381 0.00 0.00 29.63 3.66
4233 4528 8.127954 GCTGGAAAAATAATTTGCTTGAAACAA 58.872 29.630 0.00 0.00 0.00 2.83
4299 4594 1.550976 GTTGCACTACAGCCTAGACCT 59.449 52.381 0.00 0.00 0.00 3.85
4305 4600 2.358737 GGCGTTGCACTACAGCCT 60.359 61.111 13.61 0.00 44.06 4.58
4339 4634 2.241430 AGGGTCCACTTGTTATTAGGGC 59.759 50.000 0.00 0.00 0.00 5.19
4343 4638 3.267551 GGGGAAGGGTCCACTTGTTATTA 59.732 47.826 0.00 0.00 44.95 0.98
4348 4643 3.589139 GGGGAAGGGTCCACTTGT 58.411 61.111 0.00 0.00 44.95 3.16
4384 4689 2.658422 GCCAAGTGCCCACAATGG 59.342 61.111 15.02 15.02 40.99 3.16
4396 4701 8.641541 AGTTTAATATTTGATATGTGGGCCAAG 58.358 33.333 8.40 0.00 0.00 3.61
4436 4741 8.293157 GGCCTTTTGACTAAGATCAAATATAGC 58.707 37.037 0.00 3.73 45.55 2.97
4440 4745 6.411376 TCGGCCTTTTGACTAAGATCAAATA 58.589 36.000 0.00 0.00 45.55 1.40
4442 4747 4.647611 TCGGCCTTTTGACTAAGATCAAA 58.352 39.130 0.00 0.00 44.80 2.69
4453 4758 3.008594 TCATACCTTTCTCGGCCTTTTGA 59.991 43.478 0.00 0.00 0.00 2.69
4454 4759 3.343617 TCATACCTTTCTCGGCCTTTTG 58.656 45.455 0.00 0.00 0.00 2.44
4460 4765 5.123979 AGTTTCAAATCATACCTTTCTCGGC 59.876 40.000 0.00 0.00 0.00 5.54
4461 4766 6.743575 AGTTTCAAATCATACCTTTCTCGG 57.256 37.500 0.00 0.00 0.00 4.63
4462 4767 7.061094 GCAAAGTTTCAAATCATACCTTTCTCG 59.939 37.037 0.00 0.00 0.00 4.04
4539 4844 1.803334 TTTCGTTTCATCCCACCTCG 58.197 50.000 0.00 0.00 0.00 4.63
4549 4854 6.037720 TCACTGCAACTCTTAATTTCGTTTCA 59.962 34.615 0.00 0.00 0.00 2.69
4550 4855 6.427150 TCACTGCAACTCTTAATTTCGTTTC 58.573 36.000 0.00 0.00 0.00 2.78
4559 4864 8.896320 TTGTTAATACTCACTGCAACTCTTAA 57.104 30.769 0.00 0.00 0.00 1.85
4597 4902 9.190858 GCATATACATGTTTGTTTGTCTCAAAA 57.809 29.630 2.30 0.00 36.71 2.44
4598 4903 7.536964 CGCATATACATGTTTGTTTGTCTCAAA 59.463 33.333 2.30 0.00 37.28 2.69
4599 4904 7.020602 CGCATATACATGTTTGTTTGTCTCAA 58.979 34.615 2.30 0.00 37.28 3.02
4600 4905 6.148645 ACGCATATACATGTTTGTTTGTCTCA 59.851 34.615 2.30 0.00 37.28 3.27
4601 4906 6.465781 CACGCATATACATGTTTGTTTGTCTC 59.534 38.462 2.30 0.00 37.28 3.36
4602 4907 6.072728 ACACGCATATACATGTTTGTTTGTCT 60.073 34.615 2.30 0.00 37.28 3.41
4603 4908 6.032355 CACACGCATATACATGTTTGTTTGTC 59.968 38.462 2.30 0.00 37.28 3.18
4604 4909 5.855925 CACACGCATATACATGTTTGTTTGT 59.144 36.000 2.30 5.09 37.28 2.83
4605 4910 5.220006 GCACACGCATATACATGTTTGTTTG 60.220 40.000 2.30 4.52 36.24 2.93
4606 4911 4.856487 GCACACGCATATACATGTTTGTTT 59.144 37.500 2.30 0.00 36.24 2.83
4607 4912 4.155826 AGCACACGCATATACATGTTTGTT 59.844 37.500 2.30 0.00 42.27 2.83
4608 4913 3.689161 AGCACACGCATATACATGTTTGT 59.311 39.130 2.30 0.00 42.27 2.83
4609 4914 4.277257 AGCACACGCATATACATGTTTG 57.723 40.909 2.30 0.96 42.27 2.93
4610 4915 4.272504 GGTAGCACACGCATATACATGTTT 59.727 41.667 2.30 0.00 42.27 2.83
4611 4916 3.807622 GGTAGCACACGCATATACATGTT 59.192 43.478 2.30 0.00 42.27 2.71
4612 4917 3.181470 TGGTAGCACACGCATATACATGT 60.181 43.478 2.69 2.69 42.27 3.21
4613 4918 3.184379 GTGGTAGCACACGCATATACATG 59.816 47.826 19.87 0.00 42.27 3.21
4614 4919 3.390135 GTGGTAGCACACGCATATACAT 58.610 45.455 19.87 0.00 42.27 2.29
4615 4920 2.816689 GTGGTAGCACACGCATATACA 58.183 47.619 19.87 0.00 42.27 2.29
4624 4929 0.865769 CAACTTCCGTGGTAGCACAC 59.134 55.000 23.74 4.12 37.99 3.82
4625 4930 0.250124 CCAACTTCCGTGGTAGCACA 60.250 55.000 23.74 3.39 0.00 4.57
4626 4931 0.953960 CCCAACTTCCGTGGTAGCAC 60.954 60.000 15.12 15.12 0.00 4.40
4627 4932 1.373435 CCCAACTTCCGTGGTAGCA 59.627 57.895 0.00 0.00 0.00 3.49
4628 4933 2.038837 GCCCAACTTCCGTGGTAGC 61.039 63.158 0.00 0.00 0.00 3.58
4629 4934 1.376812 GGCCCAACTTCCGTGGTAG 60.377 63.158 0.00 0.00 0.00 3.18
4630 4935 1.844289 AGGCCCAACTTCCGTGGTA 60.844 57.895 0.00 0.00 0.00 3.25
4631 4936 3.175710 AGGCCCAACTTCCGTGGT 61.176 61.111 0.00 0.00 0.00 4.16
4632 4937 2.484287 ATCAGGCCCAACTTCCGTGG 62.484 60.000 0.00 0.00 0.00 4.94
4633 4938 1.002134 ATCAGGCCCAACTTCCGTG 60.002 57.895 0.00 0.00 0.00 4.94
4634 4939 1.002134 CATCAGGCCCAACTTCCGT 60.002 57.895 0.00 0.00 0.00 4.69
4635 4940 0.107017 ATCATCAGGCCCAACTTCCG 60.107 55.000 0.00 0.00 0.00 4.30
4636 4941 3.117888 TCTTATCATCAGGCCCAACTTCC 60.118 47.826 0.00 0.00 0.00 3.46
4637 4942 4.156455 TCTTATCATCAGGCCCAACTTC 57.844 45.455 0.00 0.00 0.00 3.01
4638 4943 4.018050 ACTTCTTATCATCAGGCCCAACTT 60.018 41.667 0.00 0.00 0.00 2.66
4639 4944 3.525199 ACTTCTTATCATCAGGCCCAACT 59.475 43.478 0.00 0.00 0.00 3.16
4640 4945 3.879892 GACTTCTTATCATCAGGCCCAAC 59.120 47.826 0.00 0.00 0.00 3.77
4641 4946 3.117888 GGACTTCTTATCATCAGGCCCAA 60.118 47.826 0.00 0.00 0.00 4.12
4642 4947 2.439507 GGACTTCTTATCATCAGGCCCA 59.560 50.000 0.00 0.00 0.00 5.36
4643 4948 2.439507 TGGACTTCTTATCATCAGGCCC 59.560 50.000 0.00 0.00 32.75 5.80
4644 4949 3.845781 TGGACTTCTTATCATCAGGCC 57.154 47.619 0.00 0.00 34.60 5.19
4645 4950 7.220030 TCTTTATGGACTTCTTATCATCAGGC 58.780 38.462 0.00 0.00 0.00 4.85
4646 4951 9.618890 TTTCTTTATGGACTTCTTATCATCAGG 57.381 33.333 0.00 0.00 0.00 3.86
4655 4960 9.401058 CCATCATACTTTCTTTATGGACTTCTT 57.599 33.333 0.00 0.00 36.76 2.52
4656 4961 7.500559 GCCATCATACTTTCTTTATGGACTTCT 59.499 37.037 0.00 0.00 36.76 2.85
4657 4962 7.255277 GGCCATCATACTTTCTTTATGGACTTC 60.255 40.741 0.00 0.00 39.09 3.01
4658 4963 6.547510 GGCCATCATACTTTCTTTATGGACTT 59.452 38.462 0.00 0.00 39.09 3.01
4659 4964 6.064717 GGCCATCATACTTTCTTTATGGACT 58.935 40.000 0.00 0.00 39.09 3.85
4660 4965 5.241728 GGGCCATCATACTTTCTTTATGGAC 59.758 44.000 4.39 0.00 41.05 4.02
4661 4966 5.103728 TGGGCCATCATACTTTCTTTATGGA 60.104 40.000 0.00 0.00 36.76 3.41
4662 4967 5.010012 GTGGGCCATCATACTTTCTTTATGG 59.990 44.000 10.70 0.00 37.52 2.74
4663 4968 5.593909 TGTGGGCCATCATACTTTCTTTATG 59.406 40.000 10.70 0.00 0.00 1.90
4664 4969 5.765510 TGTGGGCCATCATACTTTCTTTAT 58.234 37.500 10.70 0.00 0.00 1.40
4665 4970 5.186256 TGTGGGCCATCATACTTTCTTTA 57.814 39.130 10.70 0.00 0.00 1.85
4666 4971 4.046286 TGTGGGCCATCATACTTTCTTT 57.954 40.909 10.70 0.00 0.00 2.52
4667 4972 3.737559 TGTGGGCCATCATACTTTCTT 57.262 42.857 10.70 0.00 0.00 2.52
4668 4973 3.559069 CATGTGGGCCATCATACTTTCT 58.441 45.455 10.70 0.00 0.00 2.52
4669 4974 2.624838 CCATGTGGGCCATCATACTTTC 59.375 50.000 10.70 0.00 0.00 2.62
4670 4975 2.669781 CCATGTGGGCCATCATACTTT 58.330 47.619 10.70 0.00 0.00 2.66
4671 4976 2.369983 CCATGTGGGCCATCATACTT 57.630 50.000 10.70 0.00 0.00 2.24
4684 4989 0.961019 CCAACACTTCCACCCATGTG 59.039 55.000 0.00 0.00 42.39 3.21
4685 4990 0.555769 ACCAACACTTCCACCCATGT 59.444 50.000 0.00 0.00 0.00 3.21
4686 4991 1.703411 AACCAACACTTCCACCCATG 58.297 50.000 0.00 0.00 0.00 3.66
4687 4992 2.470057 AAACCAACACTTCCACCCAT 57.530 45.000 0.00 0.00 0.00 4.00
4688 4993 2.104170 GAAAACCAACACTTCCACCCA 58.896 47.619 0.00 0.00 0.00 4.51
4689 4994 1.411246 GGAAAACCAACACTTCCACCC 59.589 52.381 0.00 0.00 38.80 4.61
4690 4995 1.066454 CGGAAAACCAACACTTCCACC 59.934 52.381 1.38 0.00 38.88 4.61
4691 4996 1.066454 CCGGAAAACCAACACTTCCAC 59.934 52.381 0.00 0.00 38.88 4.02
4692 4997 1.394618 CCGGAAAACCAACACTTCCA 58.605 50.000 0.00 0.00 38.88 3.53
4693 4998 0.031585 GCCGGAAAACCAACACTTCC 59.968 55.000 5.05 0.00 36.12 3.46
4694 4999 1.029681 AGCCGGAAAACCAACACTTC 58.970 50.000 5.05 0.00 0.00 3.01
4695 5000 2.158726 TCTAGCCGGAAAACCAACACTT 60.159 45.455 5.05 0.00 0.00 3.16
4696 5001 1.418637 TCTAGCCGGAAAACCAACACT 59.581 47.619 5.05 0.00 0.00 3.55
4697 5002 1.886886 TCTAGCCGGAAAACCAACAC 58.113 50.000 5.05 0.00 0.00 3.32
4698 5003 2.642154 TTCTAGCCGGAAAACCAACA 57.358 45.000 5.05 0.00 0.00 3.33
4699 5004 4.259356 ACTATTCTAGCCGGAAAACCAAC 58.741 43.478 5.05 0.00 0.00 3.77
4700 5005 4.563140 ACTATTCTAGCCGGAAAACCAA 57.437 40.909 5.05 0.00 0.00 3.67
4701 5006 4.713321 AGTACTATTCTAGCCGGAAAACCA 59.287 41.667 5.05 0.00 0.00 3.67
4702 5007 5.273674 AGTACTATTCTAGCCGGAAAACC 57.726 43.478 5.05 0.00 0.00 3.27
4703 5008 7.487484 ACTTAGTACTATTCTAGCCGGAAAAC 58.513 38.462 5.05 0.00 0.00 2.43
4704 5009 7.651027 ACTTAGTACTATTCTAGCCGGAAAA 57.349 36.000 5.05 0.00 0.00 2.29
4705 5010 7.123247 ACAACTTAGTACTATTCTAGCCGGAAA 59.877 37.037 5.05 0.00 0.00 3.13
4706 5011 6.604795 ACAACTTAGTACTATTCTAGCCGGAA 59.395 38.462 5.05 0.00 0.00 4.30
4707 5012 6.125029 ACAACTTAGTACTATTCTAGCCGGA 58.875 40.000 5.05 0.00 0.00 5.14
4708 5013 6.388435 ACAACTTAGTACTATTCTAGCCGG 57.612 41.667 2.79 0.00 0.00 6.13
4709 5014 7.583230 CCTACAACTTAGTACTATTCTAGCCG 58.417 42.308 2.79 0.00 0.00 5.52
4710 5015 7.014038 TGCCTACAACTTAGTACTATTCTAGCC 59.986 40.741 2.79 0.00 0.00 3.93
4711 5016 7.938715 TGCCTACAACTTAGTACTATTCTAGC 58.061 38.462 2.79 1.30 0.00 3.42
4714 5019 9.819267 GAAATGCCTACAACTTAGTACTATTCT 57.181 33.333 2.79 0.00 0.00 2.40
4715 5020 9.043079 GGAAATGCCTACAACTTAGTACTATTC 57.957 37.037 2.79 0.00 0.00 1.75
4716 5021 8.959705 GGAAATGCCTACAACTTAGTACTATT 57.040 34.615 2.79 0.00 0.00 1.73
4734 5039 1.680338 AGGCACCGAATAGGAAATGC 58.320 50.000 0.00 0.00 45.00 3.56
4735 5040 3.278574 TGAAGGCACCGAATAGGAAATG 58.721 45.455 0.00 0.00 45.00 2.32
4736 5041 3.545703 CTGAAGGCACCGAATAGGAAAT 58.454 45.455 0.00 0.00 45.00 2.17
4737 5042 2.939640 GCTGAAGGCACCGAATAGGAAA 60.940 50.000 0.00 0.00 45.00 3.13
4738 5043 1.406887 GCTGAAGGCACCGAATAGGAA 60.407 52.381 0.00 0.00 45.00 3.36
4739 5044 0.178068 GCTGAAGGCACCGAATAGGA 59.822 55.000 0.00 0.00 45.00 2.94
4750 5055 2.084546 ACGTTAAGGAATGCTGAAGGC 58.915 47.619 1.43 0.00 42.22 4.35
4751 5056 2.159517 GCACGTTAAGGAATGCTGAAGG 60.160 50.000 1.43 0.00 35.16 3.46
4752 5057 2.483877 TGCACGTTAAGGAATGCTGAAG 59.516 45.455 10.80 0.00 38.90 3.02
4753 5058 2.499197 TGCACGTTAAGGAATGCTGAA 58.501 42.857 10.80 0.00 38.90 3.02
4754 5059 2.177394 TGCACGTTAAGGAATGCTGA 57.823 45.000 10.80 0.00 38.90 4.26
4755 5060 3.492421 AATGCACGTTAAGGAATGCTG 57.508 42.857 10.80 0.00 38.90 4.41
4756 5061 3.426159 CGAAATGCACGTTAAGGAATGCT 60.426 43.478 10.80 0.00 38.90 3.79
4757 5062 2.845967 CGAAATGCACGTTAAGGAATGC 59.154 45.455 1.43 3.15 38.59 3.56
4758 5063 4.078363 ACGAAATGCACGTTAAGGAATG 57.922 40.909 1.43 0.00 41.18 2.67
4767 5072 1.069500 GCCAGTTAACGAAATGCACGT 60.069 47.619 0.00 0.00 45.89 4.49
4768 5073 1.602191 GCCAGTTAACGAAATGCACG 58.398 50.000 0.00 0.00 29.12 5.34
4769 5074 1.602191 CGCCAGTTAACGAAATGCAC 58.398 50.000 0.00 0.00 29.12 4.57
4770 5075 0.109964 GCGCCAGTTAACGAAATGCA 60.110 50.000 0.00 0.00 29.12 3.96
4771 5076 0.168128 AGCGCCAGTTAACGAAATGC 59.832 50.000 2.29 2.65 29.12 3.56
4772 5077 1.463056 TCAGCGCCAGTTAACGAAATG 59.537 47.619 2.29 0.00 0.00 2.32
4773 5078 1.803334 TCAGCGCCAGTTAACGAAAT 58.197 45.000 2.29 0.00 0.00 2.17
4774 5079 1.529438 CTTCAGCGCCAGTTAACGAAA 59.471 47.619 2.29 0.00 0.00 3.46
4775 5080 1.144969 CTTCAGCGCCAGTTAACGAA 58.855 50.000 2.29 0.00 0.00 3.85
4776 5081 0.669318 CCTTCAGCGCCAGTTAACGA 60.669 55.000 2.29 0.00 0.00 3.85
4777 5082 1.787847 CCTTCAGCGCCAGTTAACG 59.212 57.895 2.29 0.00 0.00 3.18
4778 5083 1.502190 GCCTTCAGCGCCAGTTAAC 59.498 57.895 2.29 0.00 0.00 2.01
4779 5084 3.981308 GCCTTCAGCGCCAGTTAA 58.019 55.556 2.29 0.00 0.00 2.01
4788 5093 0.723981 CAGTTAAGAGCGCCTTCAGC 59.276 55.000 13.37 6.64 36.34 4.26
4789 5094 1.363744 CCAGTTAAGAGCGCCTTCAG 58.636 55.000 13.37 4.30 36.34 3.02
4790 5095 0.036388 CCCAGTTAAGAGCGCCTTCA 60.036 55.000 13.37 2.00 36.34 3.02
4791 5096 1.369839 GCCCAGTTAAGAGCGCCTTC 61.370 60.000 13.37 1.39 36.34 3.46
4792 5097 1.377333 GCCCAGTTAAGAGCGCCTT 60.377 57.895 2.29 10.19 38.87 4.35
4793 5098 2.269241 GCCCAGTTAAGAGCGCCT 59.731 61.111 2.29 0.00 0.00 5.52
4794 5099 2.824489 GGCCCAGTTAAGAGCGCC 60.824 66.667 2.29 0.00 0.00 6.53
4795 5100 2.824489 GGGCCCAGTTAAGAGCGC 60.824 66.667 19.95 0.00 0.00 5.92
4796 5101 2.511600 CGGGCCCAGTTAAGAGCG 60.512 66.667 24.92 0.00 0.00 5.03
4797 5102 2.824489 GCGGGCCCAGTTAAGAGC 60.824 66.667 24.92 10.79 0.00 4.09
4798 5103 2.124695 GGCGGGCCCAGTTAAGAG 60.125 66.667 24.92 3.18 0.00 2.85
4808 5113 0.322187 AAATCGTATATGGGCGGGCC 60.322 55.000 14.65 14.65 0.00 5.80
4809 5114 0.802494 CAAATCGTATATGGGCGGGC 59.198 55.000 0.00 0.00 0.00 6.13
4810 5115 2.465860 TCAAATCGTATATGGGCGGG 57.534 50.000 0.00 0.00 0.00 6.13
4811 5116 5.049060 TCAAAATCAAATCGTATATGGGCGG 60.049 40.000 0.00 0.00 0.00 6.13
4812 5117 5.996219 TCAAAATCAAATCGTATATGGGCG 58.004 37.500 0.00 0.00 0.00 6.13
4813 5118 6.970484 ACTCAAAATCAAATCGTATATGGGC 58.030 36.000 0.00 0.00 0.00 5.36
4819 5124 8.674607 GGGAGTTTACTCAAAATCAAATCGTAT 58.325 33.333 11.67 0.00 44.60 3.06
4820 5125 7.662258 TGGGAGTTTACTCAAAATCAAATCGTA 59.338 33.333 11.67 0.00 44.60 3.43
4821 5126 6.488683 TGGGAGTTTACTCAAAATCAAATCGT 59.511 34.615 11.67 0.00 44.60 3.73
4822 5127 6.908825 TGGGAGTTTACTCAAAATCAAATCG 58.091 36.000 11.67 0.00 44.60 3.34
4823 5128 9.541143 TTTTGGGAGTTTACTCAAAATCAAATC 57.459 29.630 11.67 0.00 44.60 2.17
4824 5129 9.898152 TTTTTGGGAGTTTACTCAAAATCAAAT 57.102 25.926 11.67 0.00 44.60 2.32
4848 5153 1.869342 GCCTGTGTTCTGCGCATTTTT 60.869 47.619 12.24 0.00 36.94 1.94
4849 5154 0.318955 GCCTGTGTTCTGCGCATTTT 60.319 50.000 12.24 0.00 36.94 1.82
4850 5155 1.286880 GCCTGTGTTCTGCGCATTT 59.713 52.632 12.24 0.00 36.94 2.32
4851 5156 1.246056 ATGCCTGTGTTCTGCGCATT 61.246 50.000 12.24 0.00 36.82 3.56
4852 5157 1.246056 AATGCCTGTGTTCTGCGCAT 61.246 50.000 12.24 0.00 41.77 4.73
4853 5158 1.898094 AATGCCTGTGTTCTGCGCA 60.898 52.632 10.98 10.98 36.06 6.09
4854 5159 1.443194 CAATGCCTGTGTTCTGCGC 60.443 57.895 0.00 0.00 0.00 6.09
4855 5160 0.592637 TTCAATGCCTGTGTTCTGCG 59.407 50.000 0.00 0.00 0.00 5.18
4856 5161 1.336240 GGTTCAATGCCTGTGTTCTGC 60.336 52.381 0.00 0.00 0.00 4.26
4857 5162 1.270550 GGGTTCAATGCCTGTGTTCTG 59.729 52.381 0.00 0.00 0.00 3.02
4858 5163 1.620822 GGGTTCAATGCCTGTGTTCT 58.379 50.000 0.00 0.00 0.00 3.01
4859 5164 0.240945 CGGGTTCAATGCCTGTGTTC 59.759 55.000 0.00 0.00 0.00 3.18
4860 5165 0.467290 ACGGGTTCAATGCCTGTGTT 60.467 50.000 0.00 0.00 43.44 3.32
4861 5166 1.150536 ACGGGTTCAATGCCTGTGT 59.849 52.632 0.00 0.00 43.44 3.72
4862 5167 4.079446 ACGGGTTCAATGCCTGTG 57.921 55.556 0.00 0.00 43.44 3.66
4863 5168 0.038166 ATCACGGGTTCAATGCCTGT 59.962 50.000 0.00 0.00 45.80 4.00
4864 5169 0.734889 GATCACGGGTTCAATGCCTG 59.265 55.000 0.00 0.00 38.32 4.85
4865 5170 0.620556 AGATCACGGGTTCAATGCCT 59.379 50.000 0.00 0.00 0.00 4.75
4866 5171 1.017387 GAGATCACGGGTTCAATGCC 58.983 55.000 0.00 0.00 0.00 4.40
4867 5172 1.667724 CAGAGATCACGGGTTCAATGC 59.332 52.381 0.00 0.00 0.00 3.56
4868 5173 1.667724 GCAGAGATCACGGGTTCAATG 59.332 52.381 0.00 0.00 0.00 2.82
4869 5174 1.740380 CGCAGAGATCACGGGTTCAAT 60.740 52.381 0.00 0.00 0.00 2.57
4870 5175 0.389817 CGCAGAGATCACGGGTTCAA 60.390 55.000 0.00 0.00 0.00 2.69
4871 5176 1.215382 CGCAGAGATCACGGGTTCA 59.785 57.895 0.00 0.00 0.00 3.18
4872 5177 0.454600 TACGCAGAGATCACGGGTTC 59.545 55.000 0.00 0.00 0.00 3.62
4873 5178 0.172803 GTACGCAGAGATCACGGGTT 59.827 55.000 0.00 0.00 0.00 4.11
4874 5179 1.807886 GTACGCAGAGATCACGGGT 59.192 57.895 0.00 3.05 0.00 5.28
4875 5180 1.298413 CGTACGCAGAGATCACGGG 60.298 63.158 0.52 0.00 0.00 5.28
4876 5181 0.654160 TACGTACGCAGAGATCACGG 59.346 55.000 16.72 0.00 36.95 4.94
4877 5182 1.727830 GTACGTACGCAGAGATCACG 58.272 55.000 16.72 0.00 38.52 4.35
4878 5183 1.727830 CGTACGTACGCAGAGATCAC 58.272 55.000 32.36 0.62 43.14 3.06
4889 5194 1.330306 TTGCGCTCTTTCGTACGTAC 58.670 50.000 15.90 15.90 0.00 3.67
4890 5195 1.715519 GTTTGCGCTCTTTCGTACGTA 59.284 47.619 16.05 1.99 0.00 3.57
4891 5196 0.505655 GTTTGCGCTCTTTCGTACGT 59.494 50.000 16.05 0.00 0.00 3.57
4892 5197 0.179258 GGTTTGCGCTCTTTCGTACG 60.179 55.000 9.53 9.53 0.00 3.67
4893 5198 0.863144 TGGTTTGCGCTCTTTCGTAC 59.137 50.000 9.73 0.00 0.00 3.67
4894 5199 0.863144 GTGGTTTGCGCTCTTTCGTA 59.137 50.000 9.73 0.00 0.00 3.43
4895 5200 0.814010 AGTGGTTTGCGCTCTTTCGT 60.814 50.000 9.73 0.00 0.00 3.85
4896 5201 1.136336 GTAGTGGTTTGCGCTCTTTCG 60.136 52.381 9.73 0.00 0.00 3.46
4897 5202 1.136336 CGTAGTGGTTTGCGCTCTTTC 60.136 52.381 9.73 0.00 0.00 2.62
4898 5203 0.865769 CGTAGTGGTTTGCGCTCTTT 59.134 50.000 9.73 0.00 0.00 2.52
4899 5204 1.566018 GCGTAGTGGTTTGCGCTCTT 61.566 55.000 9.73 0.00 45.48 2.85
4900 5205 2.027625 GCGTAGTGGTTTGCGCTCT 61.028 57.895 9.73 0.15 45.48 4.09
4901 5206 2.474712 GCGTAGTGGTTTGCGCTC 59.525 61.111 9.73 0.00 45.48 5.03
4904 5209 1.635844 TGATAGCGTAGTGGTTTGCG 58.364 50.000 0.00 0.00 0.00 4.85
4905 5210 3.493503 GGTATGATAGCGTAGTGGTTTGC 59.506 47.826 0.00 0.00 0.00 3.68
4906 5211 4.745125 CAGGTATGATAGCGTAGTGGTTTG 59.255 45.833 0.00 0.00 0.00 2.93
4907 5212 4.647853 TCAGGTATGATAGCGTAGTGGTTT 59.352 41.667 0.00 0.00 0.00 3.27
4908 5213 4.212716 TCAGGTATGATAGCGTAGTGGTT 58.787 43.478 0.00 0.00 0.00 3.67
4909 5214 3.828921 TCAGGTATGATAGCGTAGTGGT 58.171 45.455 0.00 0.00 0.00 4.16
4910 5215 4.702612 AGATCAGGTATGATAGCGTAGTGG 59.297 45.833 0.00 0.00 46.39 4.00
4911 5216 5.412904 TCAGATCAGGTATGATAGCGTAGTG 59.587 44.000 0.00 0.00 46.39 2.74
4912 5217 5.561679 TCAGATCAGGTATGATAGCGTAGT 58.438 41.667 0.00 0.00 46.39 2.73
4913 5218 6.072452 TGTTCAGATCAGGTATGATAGCGTAG 60.072 42.308 0.00 0.00 46.39 3.51
4914 5219 5.768164 TGTTCAGATCAGGTATGATAGCGTA 59.232 40.000 0.00 0.00 46.39 4.42
4915 5220 4.584743 TGTTCAGATCAGGTATGATAGCGT 59.415 41.667 0.00 0.00 46.39 5.07
4916 5221 5.126396 TGTTCAGATCAGGTATGATAGCG 57.874 43.478 0.00 0.00 46.39 4.26
4917 5222 7.976135 ATTTGTTCAGATCAGGTATGATAGC 57.024 36.000 0.00 0.00 46.39 2.97
4918 5223 9.551734 TCAATTTGTTCAGATCAGGTATGATAG 57.448 33.333 0.00 0.00 46.39 2.08
4921 5226 8.812513 AATCAATTTGTTCAGATCAGGTATGA 57.187 30.769 0.00 0.00 40.50 2.15
4922 5227 9.865321 AAAATCAATTTGTTCAGATCAGGTATG 57.135 29.630 0.00 0.00 0.00 2.39
4924 5229 9.695526 CAAAAATCAATTTGTTCAGATCAGGTA 57.304 29.630 0.00 0.00 35.93 3.08
4925 5230 8.597662 CAAAAATCAATTTGTTCAGATCAGGT 57.402 30.769 0.00 0.00 35.93 4.00
4956 5261 9.567848 GCTCACGAATGGAAGAAAATAAATAAA 57.432 29.630 0.00 0.00 0.00 1.40
4957 5262 8.956426 AGCTCACGAATGGAAGAAAATAAATAA 58.044 29.630 0.00 0.00 0.00 1.40
4958 5263 8.506168 AGCTCACGAATGGAAGAAAATAAATA 57.494 30.769 0.00 0.00 0.00 1.40
4959 5264 7.396540 AGCTCACGAATGGAAGAAAATAAAT 57.603 32.000 0.00 0.00 0.00 1.40
4960 5265 6.817765 AGCTCACGAATGGAAGAAAATAAA 57.182 33.333 0.00 0.00 0.00 1.40
4961 5266 6.817765 AAGCTCACGAATGGAAGAAAATAA 57.182 33.333 0.00 0.00 0.00 1.40
4962 5267 6.817765 AAAGCTCACGAATGGAAGAAAATA 57.182 33.333 0.00 0.00 0.00 1.40
4963 5268 5.712152 AAAGCTCACGAATGGAAGAAAAT 57.288 34.783 0.00 0.00 0.00 1.82
4964 5269 5.514274 AAAAGCTCACGAATGGAAGAAAA 57.486 34.783 0.00 0.00 0.00 2.29
4965 5270 5.514274 AAAAAGCTCACGAATGGAAGAAA 57.486 34.783 0.00 0.00 0.00 2.52
4989 5294 9.647797 AAGAAAGAAAACCAAATAAAAACGTCT 57.352 25.926 0.00 0.00 0.00 4.18
4990 5295 9.895894 GAAGAAAGAAAACCAAATAAAAACGTC 57.104 29.630 0.00 0.00 0.00 4.34
4991 5296 9.647797 AGAAGAAAGAAAACCAAATAAAAACGT 57.352 25.926 0.00 0.00 0.00 3.99
5000 5305 9.639601 GAGAAAGAAAGAAGAAAGAAAACCAAA 57.360 29.630 0.00 0.00 0.00 3.28
5001 5306 8.251026 GGAGAAAGAAAGAAGAAAGAAAACCAA 58.749 33.333 0.00 0.00 0.00 3.67
5002 5307 7.615757 AGGAGAAAGAAAGAAGAAAGAAAACCA 59.384 33.333 0.00 0.00 0.00 3.67
5003 5308 8.001881 AGGAGAAAGAAAGAAGAAAGAAAACC 57.998 34.615 0.00 0.00 0.00 3.27
5004 5309 9.862371 AAAGGAGAAAGAAAGAAGAAAGAAAAC 57.138 29.630 0.00 0.00 0.00 2.43
5008 5313 9.467796 AGAAAAAGGAGAAAGAAAGAAGAAAGA 57.532 29.630 0.00 0.00 0.00 2.52
5014 5319 9.353999 CGAAAAAGAAAAAGGAGAAAGAAAGAA 57.646 29.630 0.00 0.00 0.00 2.52
5015 5320 8.520351 ACGAAAAAGAAAAAGGAGAAAGAAAGA 58.480 29.630 0.00 0.00 0.00 2.52
5016 5321 8.689251 ACGAAAAAGAAAAAGGAGAAAGAAAG 57.311 30.769 0.00 0.00 0.00 2.62
5017 5322 9.563898 GTACGAAAAAGAAAAAGGAGAAAGAAA 57.436 29.630 0.00 0.00 0.00 2.52
5018 5323 8.732531 TGTACGAAAAAGAAAAAGGAGAAAGAA 58.267 29.630 0.00 0.00 0.00 2.52
5019 5324 8.271312 TGTACGAAAAAGAAAAAGGAGAAAGA 57.729 30.769 0.00 0.00 0.00 2.52
5020 5325 8.905103 TTGTACGAAAAAGAAAAAGGAGAAAG 57.095 30.769 0.00 0.00 0.00 2.62
5021 5326 9.296400 CATTGTACGAAAAAGAAAAAGGAGAAA 57.704 29.630 0.00 0.00 0.00 2.52
5022 5327 7.434013 GCATTGTACGAAAAAGAAAAAGGAGAA 59.566 33.333 0.00 0.00 0.00 2.87
5023 5328 6.915843 GCATTGTACGAAAAAGAAAAAGGAGA 59.084 34.615 0.00 0.00 0.00 3.71
5024 5329 6.129457 CGCATTGTACGAAAAAGAAAAAGGAG 60.129 38.462 0.00 0.00 0.00 3.69
5025 5330 5.683743 CGCATTGTACGAAAAAGAAAAAGGA 59.316 36.000 0.00 0.00 0.00 3.36
5026 5331 5.457473 ACGCATTGTACGAAAAAGAAAAAGG 59.543 36.000 0.00 0.00 0.00 3.11
5027 5332 6.336392 CACGCATTGTACGAAAAAGAAAAAG 58.664 36.000 0.00 0.00 0.00 2.27
5028 5333 5.230306 CCACGCATTGTACGAAAAAGAAAAA 59.770 36.000 0.00 0.00 0.00 1.94
5029 5334 4.735822 CCACGCATTGTACGAAAAAGAAAA 59.264 37.500 0.00 0.00 0.00 2.29
5030 5335 4.035324 TCCACGCATTGTACGAAAAAGAAA 59.965 37.500 0.00 0.00 0.00 2.52
5031 5336 3.560481 TCCACGCATTGTACGAAAAAGAA 59.440 39.130 0.00 0.00 0.00 2.52
5032 5337 3.132160 TCCACGCATTGTACGAAAAAGA 58.868 40.909 0.00 0.00 0.00 2.52
5033 5338 3.529634 TCCACGCATTGTACGAAAAAG 57.470 42.857 0.00 0.00 0.00 2.27
5034 5339 4.214545 AGAATCCACGCATTGTACGAAAAA 59.785 37.500 0.00 0.00 0.00 1.94
5035 5340 3.749088 AGAATCCACGCATTGTACGAAAA 59.251 39.130 0.00 0.00 0.00 2.29
5036 5341 3.331150 AGAATCCACGCATTGTACGAAA 58.669 40.909 0.00 0.00 0.00 3.46
5037 5342 2.967362 AGAATCCACGCATTGTACGAA 58.033 42.857 0.00 0.00 0.00 3.85
5038 5343 2.665649 AGAATCCACGCATTGTACGA 57.334 45.000 0.00 0.00 0.00 3.43
5039 5344 3.740044 AAAGAATCCACGCATTGTACG 57.260 42.857 0.00 0.00 0.00 3.67
5040 5345 5.041951 TGAAAAGAATCCACGCATTGTAC 57.958 39.130 0.00 0.00 0.00 2.90
5041 5346 5.697473 TTGAAAAGAATCCACGCATTGTA 57.303 34.783 0.00 0.00 0.00 2.41
5042 5347 4.582701 TTGAAAAGAATCCACGCATTGT 57.417 36.364 0.00 0.00 0.00 2.71
5043 5348 6.145858 TGAATTTGAAAAGAATCCACGCATTG 59.854 34.615 0.00 0.00 0.00 2.82
5044 5349 6.222389 TGAATTTGAAAAGAATCCACGCATT 58.778 32.000 0.00 0.00 0.00 3.56
5045 5350 5.782047 TGAATTTGAAAAGAATCCACGCAT 58.218 33.333 0.00 0.00 0.00 4.73
5046 5351 5.193663 TGAATTTGAAAAGAATCCACGCA 57.806 34.783 0.00 0.00 0.00 5.24
5047 5352 6.710692 AATGAATTTGAAAAGAATCCACGC 57.289 33.333 0.00 0.00 0.00 5.34
5048 5353 9.410556 AGTTAATGAATTTGAAAAGAATCCACG 57.589 29.630 0.00 0.00 0.00 4.94
5070 5375 9.458374 GGTTCATCGATTTTGAAGAAAAAGTTA 57.542 29.630 0.00 0.00 41.00 2.24
5071 5376 8.197439 AGGTTCATCGATTTTGAAGAAAAAGTT 58.803 29.630 0.00 0.00 41.00 2.66
5072 5377 7.716612 AGGTTCATCGATTTTGAAGAAAAAGT 58.283 30.769 0.00 0.00 41.00 2.66
5073 5378 8.579682 AAGGTTCATCGATTTTGAAGAAAAAG 57.420 30.769 0.00 0.00 41.00 2.27
5074 5379 8.940768 AAAGGTTCATCGATTTTGAAGAAAAA 57.059 26.923 0.00 0.00 41.88 1.94
5075 5380 8.940768 AAAAGGTTCATCGATTTTGAAGAAAA 57.059 26.923 0.00 0.00 33.95 2.29
5076 5381 8.940768 AAAAAGGTTCATCGATTTTGAAGAAA 57.059 26.923 0.00 0.00 33.95 2.52
5077 5382 7.651704 GGAAAAAGGTTCATCGATTTTGAAGAA 59.348 33.333 0.00 0.00 33.95 2.52
5078 5383 7.145323 GGAAAAAGGTTCATCGATTTTGAAGA 58.855 34.615 0.00 0.00 33.95 2.87
5079 5384 6.922957 TGGAAAAAGGTTCATCGATTTTGAAG 59.077 34.615 0.00 0.00 33.95 3.02
5080 5385 6.810911 TGGAAAAAGGTTCATCGATTTTGAA 58.189 32.000 0.00 0.00 0.00 2.69
5081 5386 6.398234 TGGAAAAAGGTTCATCGATTTTGA 57.602 33.333 0.00 0.00 0.00 2.69
5082 5387 7.475771 TTTGGAAAAAGGTTCATCGATTTTG 57.524 32.000 0.00 0.00 0.00 2.44
5083 5388 7.550906 TGTTTTGGAAAAAGGTTCATCGATTTT 59.449 29.630 0.00 0.00 0.00 1.82
5084 5389 7.011016 GTGTTTTGGAAAAAGGTTCATCGATTT 59.989 33.333 0.00 0.00 0.00 2.17
5085 5390 6.478673 GTGTTTTGGAAAAAGGTTCATCGATT 59.521 34.615 0.00 0.00 0.00 3.34
5086 5391 5.983118 GTGTTTTGGAAAAAGGTTCATCGAT 59.017 36.000 0.00 0.00 0.00 3.59
5087 5392 5.105716 TGTGTTTTGGAAAAAGGTTCATCGA 60.106 36.000 0.00 0.00 0.00 3.59
5088 5393 5.105752 TGTGTTTTGGAAAAAGGTTCATCG 58.894 37.500 0.00 0.00 0.00 3.84
5089 5394 6.760770 TCATGTGTTTTGGAAAAAGGTTCATC 59.239 34.615 0.00 0.00 0.00 2.92
5090 5395 6.648192 TCATGTGTTTTGGAAAAAGGTTCAT 58.352 32.000 0.00 0.00 0.00 2.57
5091 5396 6.042638 TCATGTGTTTTGGAAAAAGGTTCA 57.957 33.333 0.00 0.00 0.00 3.18
5092 5397 6.976636 TTCATGTGTTTTGGAAAAAGGTTC 57.023 33.333 0.00 0.00 0.00 3.62
5093 5398 7.936496 ATTTCATGTGTTTTGGAAAAAGGTT 57.064 28.000 0.00 0.00 33.47 3.50
5094 5399 7.936496 AATTTCATGTGTTTTGGAAAAAGGT 57.064 28.000 0.00 0.00 33.47 3.50
5100 5405 9.534565 TCGAATAAAATTTCATGTGTTTTGGAA 57.465 25.926 12.41 0.00 0.00 3.53
5101 5406 9.534565 TTCGAATAAAATTTCATGTGTTTTGGA 57.465 25.926 0.00 5.52 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.