Multiple sequence alignment - TraesCS6D01G090800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G090800 chr6D 100.000 2874 0 0 1 2874 56840727 56843600 0.000000e+00 5308
1 TraesCS6D01G090800 chr6D 86.283 452 32 11 2448 2874 186562659 186563105 5.610000e-127 464
2 TraesCS6D01G090800 chr6D 81.538 195 25 5 1626 1813 56842155 56842345 1.780000e-32 150
3 TraesCS6D01G090800 chr6D 81.538 195 25 5 1429 1619 56842352 56842539 1.780000e-32 150
4 TraesCS6D01G090800 chr6A 94.258 1933 89 10 1 1913 71443496 71445426 0.000000e+00 2935
5 TraesCS6D01G090800 chr6A 92.813 487 19 8 1973 2453 71445460 71445936 0.000000e+00 691
6 TraesCS6D01G090800 chr6A 86.976 453 29 9 2446 2874 606312031 606312477 1.550000e-132 483
7 TraesCS6D01G090800 chr6A 81.407 199 23 7 1625 1813 71444930 71445124 1.780000e-32 150
8 TraesCS6D01G090800 chr6B 94.794 922 39 3 898 1813 127319038 127319956 0.000000e+00 1428
9 TraesCS6D01G090800 chr6B 91.784 998 60 8 1429 2409 127319771 127320763 0.000000e+00 1369
10 TraesCS6D01G090800 chr6B 91.611 751 53 7 1 748 127318003 127318746 0.000000e+00 1029
11 TraesCS6D01G090800 chr6B 88.248 451 21 7 2448 2874 164563066 164562624 7.100000e-141 510
12 TraesCS6D01G090800 chr6B 94.488 127 7 0 737 863 127318920 127319046 2.260000e-46 196
13 TraesCS6D01G090800 chr6B 85.052 194 22 6 1429 1619 127319963 127320152 1.050000e-44 191
14 TraesCS6D01G090800 chr1B 86.385 852 72 14 617 1456 672850850 672851669 0.000000e+00 891
15 TraesCS6D01G090800 chr1B 85.841 452 33 6 2447 2874 370726754 370726310 4.370000e-123 451
16 TraesCS6D01G090800 chr7D 85.798 852 73 16 617 1456 568319091 568318276 0.000000e+00 859
17 TraesCS6D01G090800 chr2D 88.496 452 23 3 2447 2874 61793785 61793339 1.180000e-143 520
18 TraesCS6D01G090800 chr5B 87.636 461 24 8 2439 2874 223120988 223120536 3.300000e-139 505
19 TraesCS6D01G090800 chr3B 87.946 448 25 3 2451 2874 671413922 671414364 4.280000e-138 501
20 TraesCS6D01G090800 chr3B 85.619 452 36 13 2447 2874 187445565 187445119 5.650000e-122 448
21 TraesCS6D01G090800 chr3B 85.242 454 37 10 2446 2874 781763995 781764443 9.450000e-120 440
22 TraesCS6D01G090800 chr2B 86.900 458 30 5 2442 2874 2496350 2496802 1.200000e-133 486
23 TraesCS6D01G090800 chr2B 89.513 267 28 0 1190 1456 745494642 745494908 3.550000e-89 339
24 TraesCS6D01G090800 chr3A 87.140 451 29 3 2448 2874 728612624 728613069 4.310000e-133 484
25 TraesCS6D01G090800 chr7B 86.667 450 29 10 2449 2874 503477880 503478322 1.210000e-128 470
26 TraesCS6D01G090800 chr5A 85.619 452 35 14 2447 2874 559744414 559743969 5.650000e-122 448
27 TraesCS6D01G090800 chr7A 87.004 277 11 8 2447 2698 515008463 515008739 3.620000e-74 289


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G090800 chr6D 56840727 56843600 2873 False 1869.333333 5308 87.692000 1 2874 3 chr6D.!!$F2 2873
1 TraesCS6D01G090800 chr6A 71443496 71445936 2440 False 1258.666667 2935 89.492667 1 2453 3 chr6A.!!$F2 2452
2 TraesCS6D01G090800 chr6B 127318003 127320763 2760 False 842.600000 1428 91.545800 1 2409 5 chr6B.!!$F1 2408
3 TraesCS6D01G090800 chr1B 672850850 672851669 819 False 891.000000 891 86.385000 617 1456 1 chr1B.!!$F1 839
4 TraesCS6D01G090800 chr7D 568318276 568319091 815 True 859.000000 859 85.798000 617 1456 1 chr7D.!!$R1 839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
365 369 0.676782 CCCCTAAGTTTGCTGTCCCG 60.677 60.0 0.0 0.0 0.0 5.14 F
524 528 0.815734 CCGAGGGTCGTAACTCACAT 59.184 55.0 0.0 0.0 38.4 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1509 1707 1.066573 GCTGTGCTTTGGCTAGAGAGA 60.067 52.381 0.0 0.0 39.59 3.10 R
2515 2930 0.031449 TTTTCCTTTTTGCCGCCTCG 59.969 50.000 0.0 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.755206 GGTTGTAGCTTCCTGGTTAAAATTT 58.245 36.000 0.00 0.00 0.00 1.82
212 213 5.696724 ACTCTGTTATGCCGAACTAATATGC 59.303 40.000 0.00 0.00 0.00 3.14
237 238 6.237648 CGGAATCATTTTTATCAAGTGCAAGC 60.238 38.462 0.00 0.00 0.00 4.01
365 369 0.676782 CCCCTAAGTTTGCTGTCCCG 60.677 60.000 0.00 0.00 0.00 5.14
378 382 2.480932 GCTGTCCCGTAAGTAAGTAGGC 60.481 54.545 0.00 0.00 0.00 3.93
382 386 3.698539 GTCCCGTAAGTAAGTAGGCTCTT 59.301 47.826 0.00 0.00 0.00 2.85
385 389 6.712547 GTCCCGTAAGTAAGTAGGCTCTTATA 59.287 42.308 0.00 0.00 33.39 0.98
388 392 9.406113 CCCGTAAGTAAGTAGGCTCTTATATAT 57.594 37.037 0.00 0.00 33.39 0.86
398 402 7.945109 AGTAGGCTCTTATATATCAGTGTGTGA 59.055 37.037 0.00 0.00 40.38 3.58
401 405 6.295011 GGCTCTTATATATCAGTGTGTGAGCT 60.295 42.308 0.00 0.00 41.71 4.09
422 426 4.098349 GCTTCTTTGATTGATGCATACCCA 59.902 41.667 0.00 0.00 35.52 4.51
428 432 4.460263 TGATTGATGCATACCCAACCTAC 58.540 43.478 0.00 0.00 0.00 3.18
430 434 1.140052 TGATGCATACCCAACCTACGG 59.860 52.381 0.00 0.00 0.00 4.02
462 466 2.380084 TTCGCACCCAATGTACTCTC 57.620 50.000 0.00 0.00 0.00 3.20
477 481 4.888239 TGTACTCTCTAGTGTATTCTGGCC 59.112 45.833 0.00 0.00 36.36 5.36
487 491 8.367911 TCTAGTGTATTCTGGCCAACTATTATG 58.632 37.037 7.01 0.00 0.00 1.90
497 501 7.661437 TCTGGCCAACTATTATGTGTTGATATC 59.339 37.037 7.01 0.00 44.29 1.63
524 528 0.815734 CCGAGGGTCGTAACTCACAT 59.184 55.000 0.00 0.00 38.40 3.21
533 537 5.168569 GGTCGTAACTCACATGAAGAATCA 58.831 41.667 0.00 0.00 40.57 2.57
561 565 2.575532 ACGCTGATGGAATAATGTGGG 58.424 47.619 0.00 0.00 0.00 4.61
566 570 3.499338 TGATGGAATAATGTGGGGATGC 58.501 45.455 0.00 0.00 0.00 3.91
749 941 8.824159 ATCAATTCTGAGGATTATAACTCACG 57.176 34.615 2.48 0.00 38.71 4.35
760 952 6.696148 GGATTATAACTCACGTGAAGAATCGT 59.304 38.462 20.49 9.87 40.99 3.73
768 960 3.301906 CACGTGAAGAATCGTCAGCTTAG 59.698 47.826 10.90 0.00 38.23 2.18
916 1108 8.900983 TGCATGCAAAGTGTAGTAATATGATA 57.099 30.769 20.30 0.00 0.00 2.15
994 1186 6.240894 TGTTTTGATAGGTCTGCTGAATCTT 58.759 36.000 0.00 0.00 0.00 2.40
1052 1244 1.302832 CTCCTTTCGTGCCTGCCTT 60.303 57.895 0.00 0.00 0.00 4.35
1241 1436 5.494724 TGAGTCATCATCAAAAGGAGAAGG 58.505 41.667 0.00 0.00 0.00 3.46
1266 1464 2.674084 GGCAAGTCACGCGGGTAAC 61.674 63.158 8.89 0.00 0.00 2.50
1427 1625 8.350722 TCTCGTATCCAGTACACTGATTATTTC 58.649 37.037 10.96 0.08 46.59 2.17
1435 1633 8.204160 CCAGTACACTGATTATTTCTATGGTGA 58.796 37.037 10.96 0.00 46.59 4.02
1463 1661 7.436933 TGATGCATTAGATTCTGTACCTAGTG 58.563 38.462 0.00 0.00 0.00 2.74
1480 1678 2.195567 TGTTCTGTGCAAGCCTGGC 61.196 57.895 11.65 11.65 0.00 4.85
1482 1680 1.455402 TTCTGTGCAAGCCTGGCAA 60.455 52.632 22.65 0.00 43.91 4.52
1488 1686 2.855514 GCAAGCCTGGCAACCGAAA 61.856 57.895 22.65 0.00 0.00 3.46
1509 1707 7.223777 CCGAAACAAACACCATGTCTTATTTTT 59.776 33.333 0.00 0.00 0.00 1.94
1510 1708 8.265998 CGAAACAAACACCATGTCTTATTTTTC 58.734 33.333 0.00 0.00 0.00 2.29
1701 1904 7.809331 TGTAGCTGAATCAACATCATGTTTTTC 59.191 33.333 0.00 7.99 38.77 2.29
1702 1905 6.161381 AGCTGAATCAACATCATGTTTTTCC 58.839 36.000 15.63 6.09 38.77 3.13
1704 1907 6.416631 TGAATCAACATCATGTTTTTCCCA 57.583 33.333 15.63 3.92 38.77 4.37
1801 2199 3.130516 TGTCGAACTCTCTGTTTCAGTGT 59.869 43.478 0.00 0.00 39.30 3.55
1928 2337 0.037326 GCCACCGTCATCAAGACTCA 60.037 55.000 0.00 0.00 45.32 3.41
1940 2349 2.826128 TCAAGACTCAATGTAGCGGAGT 59.174 45.455 0.00 0.00 44.12 3.85
1959 2368 4.026475 GGAGTACAATTTCTCGATTCTGCG 60.026 45.833 0.00 0.00 0.00 5.18
2018 2427 6.636850 CCAAAAGCAACAAGTACTATGTGTTC 59.363 38.462 8.20 4.98 33.27 3.18
2032 2441 7.292713 ACTATGTGTTCGGGGTTTTAAATTT 57.707 32.000 0.00 0.00 0.00 1.82
2135 2544 3.187700 CCGTTTAGACTCCAGAATTCGG 58.812 50.000 9.28 9.28 0.00 4.30
2250 2665 1.226831 GTTGTGTGGTGCGGGTTTG 60.227 57.895 0.00 0.00 0.00 2.93
2298 2713 3.118665 AGTTGGTTGTGCTTTGCAGAAAT 60.119 39.130 3.76 0.00 43.09 2.17
2387 2802 5.282055 TGTCTTCTACTGATATGCCTTGG 57.718 43.478 0.00 0.00 0.00 3.61
2412 2827 0.804989 GTTCGGCTGCTGCAGTTAAT 59.195 50.000 28.50 0.00 41.91 1.40
2415 2830 0.745845 CGGCTGCTGCAGTTAATCCT 60.746 55.000 28.50 0.00 41.91 3.24
2416 2831 0.737219 GGCTGCTGCAGTTAATCCTG 59.263 55.000 28.50 3.51 41.91 3.86
2417 2832 1.679944 GGCTGCTGCAGTTAATCCTGA 60.680 52.381 28.50 0.00 41.91 3.86
2418 2833 2.086869 GCTGCTGCAGTTAATCCTGAA 58.913 47.619 28.50 0.00 39.41 3.02
2419 2834 2.097142 GCTGCTGCAGTTAATCCTGAAG 59.903 50.000 28.50 2.03 40.58 3.02
2420 2835 3.341823 CTGCTGCAGTTAATCCTGAAGT 58.658 45.455 21.21 0.00 39.89 3.01
2421 2836 3.076621 TGCTGCAGTTAATCCTGAAGTG 58.923 45.455 16.64 0.00 39.89 3.16
2475 2890 3.520569 TGAAACAAGGCAAAAGACTTGC 58.479 40.909 10.80 0.78 46.03 4.01
2483 2898 3.648339 GCAAAAGACTTGCCATCTTCA 57.352 42.857 0.00 0.00 39.38 3.02
2484 2899 4.184079 GCAAAAGACTTGCCATCTTCAT 57.816 40.909 0.00 0.00 39.38 2.57
2485 2900 4.563061 GCAAAAGACTTGCCATCTTCATT 58.437 39.130 0.00 0.00 39.38 2.57
2486 2901 4.387862 GCAAAAGACTTGCCATCTTCATTG 59.612 41.667 0.00 0.00 39.38 2.82
2487 2902 5.775686 CAAAAGACTTGCCATCTTCATTGA 58.224 37.500 0.00 0.00 35.31 2.57
2488 2903 6.395629 CAAAAGACTTGCCATCTTCATTGAT 58.604 36.000 0.00 0.00 35.31 2.57
2489 2904 6.600882 AAAGACTTGCCATCTTCATTGATT 57.399 33.333 0.00 0.00 35.31 2.57
2490 2905 7.707624 AAAGACTTGCCATCTTCATTGATTA 57.292 32.000 0.00 0.00 35.31 1.75
2491 2906 7.707624 AAGACTTGCCATCTTCATTGATTAA 57.292 32.000 0.00 0.00 30.33 1.40
2492 2907 7.330900 AGACTTGCCATCTTCATTGATTAAG 57.669 36.000 0.00 0.00 0.00 1.85
2493 2908 7.114754 AGACTTGCCATCTTCATTGATTAAGA 58.885 34.615 0.00 0.00 36.24 2.10
2494 2909 7.613022 AGACTTGCCATCTTCATTGATTAAGAA 59.387 33.333 0.00 0.00 35.47 2.52
2495 2910 7.769220 ACTTGCCATCTTCATTGATTAAGAAG 58.231 34.615 0.00 0.00 39.98 2.85
2513 2928 8.788325 TTAAGAAGAAGGTTTAGACATAAGCC 57.212 34.615 0.00 0.00 41.34 4.35
2514 2929 6.374417 AGAAGAAGGTTTAGACATAAGCCA 57.626 37.500 4.10 0.00 42.96 4.75
2515 2930 6.174049 AGAAGAAGGTTTAGACATAAGCCAC 58.826 40.000 4.10 0.00 42.96 5.01
2516 2931 4.504858 AGAAGGTTTAGACATAAGCCACG 58.495 43.478 4.10 0.00 42.96 4.94
2517 2932 4.222145 AGAAGGTTTAGACATAAGCCACGA 59.778 41.667 0.00 0.00 42.96 4.35
2518 2933 4.124851 AGGTTTAGACATAAGCCACGAG 57.875 45.455 0.00 0.00 42.96 4.18
2519 2934 3.118738 AGGTTTAGACATAAGCCACGAGG 60.119 47.826 0.00 0.00 42.96 4.63
2529 2944 2.255252 CCACGAGGCGGCAAAAAG 59.745 61.111 13.08 0.00 0.00 2.27
2530 2945 2.255252 CACGAGGCGGCAAAAAGG 59.745 61.111 13.08 0.00 0.00 3.11
2531 2946 2.112297 ACGAGGCGGCAAAAAGGA 59.888 55.556 13.08 0.00 0.00 3.36
2532 2947 1.527380 ACGAGGCGGCAAAAAGGAA 60.527 52.632 13.08 0.00 0.00 3.36
2533 2948 1.104577 ACGAGGCGGCAAAAAGGAAA 61.105 50.000 13.08 0.00 0.00 3.13
2534 2949 0.031449 CGAGGCGGCAAAAAGGAAAA 59.969 50.000 13.08 0.00 0.00 2.29
2535 2950 1.783284 GAGGCGGCAAAAAGGAAAAG 58.217 50.000 13.08 0.00 0.00 2.27
2536 2951 0.392706 AGGCGGCAAAAAGGAAAAGG 59.607 50.000 13.08 0.00 0.00 3.11
2537 2952 0.105964 GGCGGCAAAAAGGAAAAGGT 59.894 50.000 3.07 0.00 0.00 3.50
2538 2953 1.497991 GCGGCAAAAAGGAAAAGGTC 58.502 50.000 0.00 0.00 0.00 3.85
2539 2954 1.068588 GCGGCAAAAAGGAAAAGGTCT 59.931 47.619 0.00 0.00 0.00 3.85
2540 2955 2.295070 GCGGCAAAAAGGAAAAGGTCTA 59.705 45.455 0.00 0.00 0.00 2.59
2541 2956 3.855895 GCGGCAAAAAGGAAAAGGTCTAC 60.856 47.826 0.00 0.00 0.00 2.59
2542 2957 3.568430 CGGCAAAAAGGAAAAGGTCTACT 59.432 43.478 0.00 0.00 0.00 2.57
2543 2958 4.320275 CGGCAAAAAGGAAAAGGTCTACTC 60.320 45.833 0.00 0.00 0.00 2.59
2544 2959 4.827835 GGCAAAAAGGAAAAGGTCTACTCT 59.172 41.667 0.00 0.00 0.00 3.24
2545 2960 5.048643 GGCAAAAAGGAAAAGGTCTACTCTC 60.049 44.000 0.00 0.00 0.00 3.20
2546 2961 5.334182 GCAAAAAGGAAAAGGTCTACTCTCG 60.334 44.000 0.00 0.00 0.00 4.04
2547 2962 3.596310 AAGGAAAAGGTCTACTCTCGC 57.404 47.619 0.00 0.00 0.00 5.03
2548 2963 1.473278 AGGAAAAGGTCTACTCTCGCG 59.527 52.381 0.00 0.00 0.00 5.87
2549 2964 1.471684 GGAAAAGGTCTACTCTCGCGA 59.528 52.381 9.26 9.26 0.00 5.87
2550 2965 2.517935 GAAAAGGTCTACTCTCGCGAC 58.482 52.381 3.71 0.00 0.00 5.19
2551 2966 1.531423 AAAGGTCTACTCTCGCGACA 58.469 50.000 3.71 0.00 0.00 4.35
2552 2967 1.752683 AAGGTCTACTCTCGCGACAT 58.247 50.000 3.71 0.00 0.00 3.06
2553 2968 2.616634 AGGTCTACTCTCGCGACATA 57.383 50.000 3.71 0.00 0.00 2.29
2554 2969 2.915349 AGGTCTACTCTCGCGACATAA 58.085 47.619 3.71 0.00 0.00 1.90
2555 2970 2.613133 AGGTCTACTCTCGCGACATAAC 59.387 50.000 3.71 0.00 0.00 1.89
2556 2971 2.353889 GGTCTACTCTCGCGACATAACA 59.646 50.000 3.71 0.00 0.00 2.41
2557 2972 3.546417 GGTCTACTCTCGCGACATAACAG 60.546 52.174 3.71 0.00 0.00 3.16
2558 2973 3.063725 GTCTACTCTCGCGACATAACAGT 59.936 47.826 3.71 3.09 0.00 3.55
2559 2974 4.269603 GTCTACTCTCGCGACATAACAGTA 59.730 45.833 3.71 4.13 0.00 2.74
2560 2975 4.872124 TCTACTCTCGCGACATAACAGTAA 59.128 41.667 3.71 0.00 0.00 2.24
2561 2976 4.017380 ACTCTCGCGACATAACAGTAAG 57.983 45.455 3.71 0.00 0.00 2.34
2562 2977 3.688185 ACTCTCGCGACATAACAGTAAGA 59.312 43.478 3.71 0.00 0.00 2.10
2563 2978 4.012319 TCTCGCGACATAACAGTAAGAC 57.988 45.455 3.71 0.00 0.00 3.01
2564 2979 3.106672 CTCGCGACATAACAGTAAGACC 58.893 50.000 3.71 0.00 0.00 3.85
2565 2980 2.488937 TCGCGACATAACAGTAAGACCA 59.511 45.455 3.71 0.00 0.00 4.02
2566 2981 2.852413 CGCGACATAACAGTAAGACCAG 59.148 50.000 0.00 0.00 0.00 4.00
2567 2982 3.427098 CGCGACATAACAGTAAGACCAGA 60.427 47.826 0.00 0.00 0.00 3.86
2568 2983 4.491676 GCGACATAACAGTAAGACCAGAA 58.508 43.478 0.00 0.00 0.00 3.02
2569 2984 5.109903 GCGACATAACAGTAAGACCAGAAT 58.890 41.667 0.00 0.00 0.00 2.40
2570 2985 5.005779 GCGACATAACAGTAAGACCAGAATG 59.994 44.000 0.00 0.00 0.00 2.67
2583 2998 1.760192 CAGAATGGGCCTCCTCTTTG 58.240 55.000 4.53 0.00 0.00 2.77
2584 2999 1.283029 CAGAATGGGCCTCCTCTTTGA 59.717 52.381 4.53 0.00 0.00 2.69
2585 3000 2.091994 CAGAATGGGCCTCCTCTTTGAT 60.092 50.000 4.53 0.00 0.00 2.57
2586 3001 2.584498 AGAATGGGCCTCCTCTTTGATT 59.416 45.455 4.53 0.00 0.00 2.57
2587 3002 3.012161 AGAATGGGCCTCCTCTTTGATTT 59.988 43.478 4.53 0.00 0.00 2.17
2588 3003 2.999185 TGGGCCTCCTCTTTGATTTT 57.001 45.000 4.53 0.00 0.00 1.82
2589 3004 3.258722 TGGGCCTCCTCTTTGATTTTT 57.741 42.857 4.53 0.00 0.00 1.94
2590 3005 2.899256 TGGGCCTCCTCTTTGATTTTTG 59.101 45.455 4.53 0.00 0.00 2.44
2591 3006 2.354103 GGGCCTCCTCTTTGATTTTTGC 60.354 50.000 0.84 0.00 0.00 3.68
2592 3007 2.599659 GCCTCCTCTTTGATTTTTGCG 58.400 47.619 0.00 0.00 0.00 4.85
2593 3008 2.228822 GCCTCCTCTTTGATTTTTGCGA 59.771 45.455 0.00 0.00 0.00 5.10
2594 3009 3.119352 GCCTCCTCTTTGATTTTTGCGAT 60.119 43.478 0.00 0.00 0.00 4.58
2595 3010 4.096382 GCCTCCTCTTTGATTTTTGCGATA 59.904 41.667 0.00 0.00 0.00 2.92
2596 3011 5.393027 GCCTCCTCTTTGATTTTTGCGATAA 60.393 40.000 0.00 0.00 0.00 1.75
2597 3012 6.030228 CCTCCTCTTTGATTTTTGCGATAAC 58.970 40.000 0.00 0.00 0.00 1.89
2598 3013 6.349280 CCTCCTCTTTGATTTTTGCGATAACA 60.349 38.462 0.00 0.00 0.00 2.41
2599 3014 6.976088 TCCTCTTTGATTTTTGCGATAACAA 58.024 32.000 0.00 0.00 0.00 2.83
2600 3015 7.601856 TCCTCTTTGATTTTTGCGATAACAAT 58.398 30.769 0.00 0.00 0.00 2.71
2601 3016 7.541783 TCCTCTTTGATTTTTGCGATAACAATG 59.458 33.333 0.00 0.00 0.00 2.82
2602 3017 7.201461 CCTCTTTGATTTTTGCGATAACAATGG 60.201 37.037 0.00 0.00 0.00 3.16
2603 3018 7.374272 TCTTTGATTTTTGCGATAACAATGGA 58.626 30.769 0.00 0.00 0.00 3.41
2604 3019 7.541783 TCTTTGATTTTTGCGATAACAATGGAG 59.458 33.333 0.00 0.00 0.00 3.86
2605 3020 5.649557 TGATTTTTGCGATAACAATGGAGG 58.350 37.500 0.00 0.00 0.00 4.30
2606 3021 5.184864 TGATTTTTGCGATAACAATGGAGGT 59.815 36.000 0.00 0.00 0.00 3.85
2607 3022 4.695217 TTTTGCGATAACAATGGAGGTC 57.305 40.909 0.00 0.00 0.00 3.85
2608 3023 1.934589 TGCGATAACAATGGAGGTCG 58.065 50.000 0.00 0.00 0.00 4.79
2609 3024 1.217882 GCGATAACAATGGAGGTCGG 58.782 55.000 0.00 0.00 0.00 4.79
2610 3025 1.865865 CGATAACAATGGAGGTCGGG 58.134 55.000 0.00 0.00 0.00 5.14
2611 3026 1.540363 CGATAACAATGGAGGTCGGGG 60.540 57.143 0.00 0.00 0.00 5.73
2612 3027 0.182775 ATAACAATGGAGGTCGGGGC 59.817 55.000 0.00 0.00 0.00 5.80
2613 3028 1.202099 TAACAATGGAGGTCGGGGCA 61.202 55.000 0.00 0.00 0.00 5.36
2614 3029 2.124570 CAATGGAGGTCGGGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
2615 3030 2.285368 AATGGAGGTCGGGGCAGA 60.285 61.111 0.00 0.00 0.00 4.26
2616 3031 2.370445 AATGGAGGTCGGGGCAGAG 61.370 63.158 0.00 0.00 0.00 3.35
2617 3032 2.822643 AATGGAGGTCGGGGCAGAGA 62.823 60.000 0.00 0.00 0.00 3.10
2618 3033 3.462678 GGAGGTCGGGGCAGAGAC 61.463 72.222 0.00 0.00 36.70 3.36
2619 3034 2.680352 GAGGTCGGGGCAGAGACA 60.680 66.667 8.15 0.00 39.01 3.41
2620 3035 2.039624 AGGTCGGGGCAGAGACAT 59.960 61.111 8.15 0.00 39.01 3.06
2621 3036 1.613630 AGGTCGGGGCAGAGACATT 60.614 57.895 8.15 0.00 39.01 2.71
2622 3037 1.201429 AGGTCGGGGCAGAGACATTT 61.201 55.000 8.15 0.00 39.01 2.32
2623 3038 0.322546 GGTCGGGGCAGAGACATTTT 60.323 55.000 8.15 0.00 39.01 1.82
2624 3039 0.804989 GTCGGGGCAGAGACATTTTG 59.195 55.000 2.16 0.00 37.34 2.44
2625 3040 0.690192 TCGGGGCAGAGACATTTTGA 59.310 50.000 0.00 0.00 0.00 2.69
2626 3041 1.073125 TCGGGGCAGAGACATTTTGAA 59.927 47.619 0.00 0.00 0.00 2.69
2627 3042 1.885887 CGGGGCAGAGACATTTTGAAA 59.114 47.619 0.00 0.00 0.00 2.69
2628 3043 2.295909 CGGGGCAGAGACATTTTGAAAA 59.704 45.455 0.00 0.00 0.00 2.29
2629 3044 3.243704 CGGGGCAGAGACATTTTGAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
2630 3045 4.561326 CGGGGCAGAGACATTTTGAAAAAT 60.561 41.667 0.00 0.00 39.07 1.82
2631 3046 5.308014 GGGGCAGAGACATTTTGAAAAATT 58.692 37.500 0.00 0.00 36.52 1.82
2632 3047 5.409520 GGGGCAGAGACATTTTGAAAAATTC 59.590 40.000 0.00 0.00 36.52 2.17
2633 3048 5.990996 GGGCAGAGACATTTTGAAAAATTCA 59.009 36.000 0.00 0.00 36.52 2.57
2634 3049 6.652062 GGGCAGAGACATTTTGAAAAATTCAT 59.348 34.615 0.00 0.00 39.84 2.57
2635 3050 7.360607 GGGCAGAGACATTTTGAAAAATTCATG 60.361 37.037 0.00 0.00 39.84 3.07
2636 3051 7.013529 GCAGAGACATTTTGAAAAATTCATGC 58.986 34.615 0.00 5.63 39.84 4.06
2637 3052 7.224710 CAGAGACATTTTGAAAAATTCATGCG 58.775 34.615 0.00 0.00 39.84 4.73
2638 3053 5.919196 AGACATTTTGAAAAATTCATGCGC 58.081 33.333 0.00 0.00 39.84 6.09
2639 3054 5.697633 AGACATTTTGAAAAATTCATGCGCT 59.302 32.000 9.73 0.00 39.84 5.92
2640 3055 5.681880 ACATTTTGAAAAATTCATGCGCTG 58.318 33.333 9.73 4.58 39.84 5.18
2641 3056 3.791993 TTTGAAAAATTCATGCGCTGC 57.208 38.095 9.73 0.00 39.84 5.25
2642 3057 1.338765 TGAAAAATTCATGCGCTGCG 58.661 45.000 19.17 19.17 34.08 5.18
2643 3058 2.579408 TGAAAAATTCATGCGCTGCGC 61.579 47.619 37.26 37.26 43.50 6.09
2644 3059 4.836729 TGAAAAATTCATGCGCTGCGCT 62.837 45.455 41.04 26.59 43.55 5.92
2654 3069 3.996825 CGCTGCGCTCCTTTAAAAT 57.003 47.368 9.88 0.00 0.00 1.82
2655 3070 2.262572 CGCTGCGCTCCTTTAAAATT 57.737 45.000 9.88 0.00 0.00 1.82
2656 3071 2.595386 CGCTGCGCTCCTTTAAAATTT 58.405 42.857 9.88 0.00 0.00 1.82
2657 3072 2.594214 CGCTGCGCTCCTTTAAAATTTC 59.406 45.455 9.88 0.00 0.00 2.17
2658 3073 2.923655 GCTGCGCTCCTTTAAAATTTCC 59.076 45.455 9.73 0.00 0.00 3.13
2659 3074 3.511699 CTGCGCTCCTTTAAAATTTCCC 58.488 45.455 9.73 0.00 0.00 3.97
2660 3075 2.894126 TGCGCTCCTTTAAAATTTCCCA 59.106 40.909 9.73 0.00 0.00 4.37
2661 3076 3.250744 GCGCTCCTTTAAAATTTCCCAC 58.749 45.455 0.00 0.00 0.00 4.61
2662 3077 3.498082 CGCTCCTTTAAAATTTCCCACG 58.502 45.455 0.00 0.00 0.00 4.94
2663 3078 3.189702 CGCTCCTTTAAAATTTCCCACGA 59.810 43.478 0.00 0.00 0.00 4.35
2664 3079 4.671766 CGCTCCTTTAAAATTTCCCACGAG 60.672 45.833 0.00 0.00 0.00 4.18
2665 3080 4.457949 GCTCCTTTAAAATTTCCCACGAGA 59.542 41.667 0.00 0.00 0.00 4.04
2666 3081 5.619309 GCTCCTTTAAAATTTCCCACGAGAC 60.619 44.000 0.00 0.00 0.00 3.36
2667 3082 5.378332 TCCTTTAAAATTTCCCACGAGACA 58.622 37.500 0.00 0.00 0.00 3.41
2668 3083 5.828859 TCCTTTAAAATTTCCCACGAGACAA 59.171 36.000 0.00 0.00 0.00 3.18
2669 3084 6.016610 TCCTTTAAAATTTCCCACGAGACAAG 60.017 38.462 0.00 0.00 0.00 3.16
2670 3085 3.643159 AAAATTTCCCACGAGACAAGC 57.357 42.857 0.00 0.00 0.00 4.01
2671 3086 2.270352 AATTTCCCACGAGACAAGCA 57.730 45.000 0.00 0.00 0.00 3.91
2672 3087 2.496899 ATTTCCCACGAGACAAGCAT 57.503 45.000 0.00 0.00 0.00 3.79
2673 3088 1.808411 TTTCCCACGAGACAAGCATC 58.192 50.000 0.00 0.00 0.00 3.91
2674 3089 0.684535 TTCCCACGAGACAAGCATCA 59.315 50.000 0.00 0.00 0.00 3.07
2675 3090 0.904649 TCCCACGAGACAAGCATCAT 59.095 50.000 0.00 0.00 0.00 2.45
2676 3091 1.134699 TCCCACGAGACAAGCATCATC 60.135 52.381 0.00 0.00 0.00 2.92
2677 3092 1.405933 CCCACGAGACAAGCATCATCA 60.406 52.381 0.00 0.00 0.00 3.07
2678 3093 2.349590 CCACGAGACAAGCATCATCAA 58.650 47.619 0.00 0.00 0.00 2.57
2679 3094 2.350804 CCACGAGACAAGCATCATCAAG 59.649 50.000 0.00 0.00 0.00 3.02
2680 3095 2.350804 CACGAGACAAGCATCATCAAGG 59.649 50.000 0.00 0.00 0.00 3.61
2681 3096 2.234661 ACGAGACAAGCATCATCAAGGA 59.765 45.455 0.00 0.00 0.00 3.36
2682 3097 2.864946 CGAGACAAGCATCATCAAGGAG 59.135 50.000 0.00 0.00 0.00 3.69
2683 3098 3.204526 GAGACAAGCATCATCAAGGAGG 58.795 50.000 0.00 0.00 0.00 4.30
2684 3099 1.674962 GACAAGCATCATCAAGGAGGC 59.325 52.381 0.00 0.00 44.42 4.70
2686 3101 4.863707 GCATCATCAAGGAGGCGA 57.136 55.556 0.00 0.00 34.70 5.54
2687 3102 3.319135 GCATCATCAAGGAGGCGAT 57.681 52.632 0.00 0.00 34.70 4.58
2688 3103 0.873054 GCATCATCAAGGAGGCGATG 59.127 55.000 0.00 0.00 40.34 3.84
2689 3104 1.520494 CATCATCAAGGAGGCGATGG 58.480 55.000 0.00 0.00 39.60 3.51
2690 3105 0.250640 ATCATCAAGGAGGCGATGGC 60.251 55.000 0.00 0.00 39.60 4.40
2700 3115 4.445699 GCGATGGCCTTCCTGTAG 57.554 61.111 12.77 0.05 0.00 2.74
2701 3116 1.889573 GCGATGGCCTTCCTGTAGC 60.890 63.158 12.77 6.40 0.00 3.58
2705 3120 2.272471 GGCCTTCCTGTAGCCACC 59.728 66.667 0.00 0.00 46.34 4.61
2706 3121 2.301738 GGCCTTCCTGTAGCCACCT 61.302 63.158 0.00 0.00 46.34 4.00
2707 3122 0.981277 GGCCTTCCTGTAGCCACCTA 60.981 60.000 0.00 0.00 46.34 3.08
2708 3123 0.909623 GCCTTCCTGTAGCCACCTAA 59.090 55.000 0.00 0.00 0.00 2.69
2709 3124 1.407025 GCCTTCCTGTAGCCACCTAAC 60.407 57.143 0.00 0.00 0.00 2.34
2710 3125 1.209747 CCTTCCTGTAGCCACCTAACC 59.790 57.143 0.00 0.00 0.00 2.85
2711 3126 2.188817 CTTCCTGTAGCCACCTAACCT 58.811 52.381 0.00 0.00 0.00 3.50
2712 3127 1.861982 TCCTGTAGCCACCTAACCTC 58.138 55.000 0.00 0.00 0.00 3.85
2713 3128 0.831307 CCTGTAGCCACCTAACCTCC 59.169 60.000 0.00 0.00 0.00 4.30
2714 3129 1.568504 CTGTAGCCACCTAACCTCCA 58.431 55.000 0.00 0.00 0.00 3.86
2715 3130 1.207329 CTGTAGCCACCTAACCTCCAC 59.793 57.143 0.00 0.00 0.00 4.02
2716 3131 0.540454 GTAGCCACCTAACCTCCACC 59.460 60.000 0.00 0.00 0.00 4.61
2717 3132 0.117541 TAGCCACCTAACCTCCACCA 59.882 55.000 0.00 0.00 0.00 4.17
2718 3133 0.550147 AGCCACCTAACCTCCACCAT 60.550 55.000 0.00 0.00 0.00 3.55
2719 3134 0.331616 GCCACCTAACCTCCACCATT 59.668 55.000 0.00 0.00 0.00 3.16
2720 3135 1.562475 GCCACCTAACCTCCACCATTA 59.438 52.381 0.00 0.00 0.00 1.90
2721 3136 2.025699 GCCACCTAACCTCCACCATTAA 60.026 50.000 0.00 0.00 0.00 1.40
2722 3137 3.617284 CCACCTAACCTCCACCATTAAC 58.383 50.000 0.00 0.00 0.00 2.01
2723 3138 3.617284 CACCTAACCTCCACCATTAACC 58.383 50.000 0.00 0.00 0.00 2.85
2724 3139 2.237893 ACCTAACCTCCACCATTAACCG 59.762 50.000 0.00 0.00 0.00 4.44
2725 3140 2.285977 CTAACCTCCACCATTAACCGC 58.714 52.381 0.00 0.00 0.00 5.68
2726 3141 0.323087 AACCTCCACCATTAACCGCC 60.323 55.000 0.00 0.00 0.00 6.13
2727 3142 1.205460 ACCTCCACCATTAACCGCCT 61.205 55.000 0.00 0.00 0.00 5.52
2728 3143 0.034477 CCTCCACCATTAACCGCCTT 60.034 55.000 0.00 0.00 0.00 4.35
2729 3144 1.094785 CTCCACCATTAACCGCCTTG 58.905 55.000 0.00 0.00 0.00 3.61
2730 3145 0.693622 TCCACCATTAACCGCCTTGA 59.306 50.000 0.00 0.00 0.00 3.02
2731 3146 1.094785 CCACCATTAACCGCCTTGAG 58.905 55.000 0.00 0.00 0.00 3.02
2732 3147 0.451783 CACCATTAACCGCCTTGAGC 59.548 55.000 0.00 0.00 38.52 4.26
2733 3148 0.679960 ACCATTAACCGCCTTGAGCC 60.680 55.000 0.00 0.00 38.78 4.70
2734 3149 0.679640 CCATTAACCGCCTTGAGCCA 60.680 55.000 0.00 0.00 38.78 4.75
2735 3150 0.451783 CATTAACCGCCTTGAGCCAC 59.548 55.000 0.00 0.00 38.78 5.01
2736 3151 0.679960 ATTAACCGCCTTGAGCCACC 60.680 55.000 0.00 0.00 38.78 4.61
2737 3152 2.058125 TTAACCGCCTTGAGCCACCA 62.058 55.000 0.00 0.00 38.78 4.17
2738 3153 2.058125 TAACCGCCTTGAGCCACCAA 62.058 55.000 0.00 0.00 38.78 3.67
2739 3154 2.361610 CCGCCTTGAGCCACCAAT 60.362 61.111 0.00 0.00 38.78 3.16
2740 3155 2.409870 CCGCCTTGAGCCACCAATC 61.410 63.158 0.00 0.00 38.78 2.67
2741 3156 1.377725 CGCCTTGAGCCACCAATCT 60.378 57.895 0.00 0.00 38.78 2.40
2742 3157 1.372087 CGCCTTGAGCCACCAATCTC 61.372 60.000 0.00 0.00 38.78 2.75
2743 3158 0.034670 GCCTTGAGCCACCAATCTCT 60.035 55.000 0.00 0.00 34.35 3.10
2744 3159 1.210478 GCCTTGAGCCACCAATCTCTA 59.790 52.381 0.00 0.00 34.35 2.43
2745 3160 2.356125 GCCTTGAGCCACCAATCTCTAA 60.356 50.000 0.00 0.00 34.35 2.10
2746 3161 3.539604 CCTTGAGCCACCAATCTCTAAG 58.460 50.000 0.00 0.00 0.00 2.18
2747 3162 3.054802 CCTTGAGCCACCAATCTCTAAGT 60.055 47.826 0.00 0.00 0.00 2.24
2748 3163 3.616956 TGAGCCACCAATCTCTAAGTG 57.383 47.619 0.00 0.00 0.00 3.16
2749 3164 3.173151 TGAGCCACCAATCTCTAAGTGA 58.827 45.455 0.00 0.00 31.79 3.41
2750 3165 3.196469 TGAGCCACCAATCTCTAAGTGAG 59.804 47.826 0.00 0.00 43.96 3.51
2751 3166 3.177228 AGCCACCAATCTCTAAGTGAGT 58.823 45.455 0.00 0.00 43.13 3.41
2752 3167 3.196685 AGCCACCAATCTCTAAGTGAGTC 59.803 47.826 0.00 0.00 43.13 3.36
2753 3168 3.196685 GCCACCAATCTCTAAGTGAGTCT 59.803 47.826 0.00 0.00 43.13 3.24
2754 3169 4.323104 GCCACCAATCTCTAAGTGAGTCTT 60.323 45.833 0.00 0.00 43.13 3.01
2755 3170 5.415221 CCACCAATCTCTAAGTGAGTCTTC 58.585 45.833 0.00 0.00 43.13 2.87
2756 3171 5.047021 CCACCAATCTCTAAGTGAGTCTTCA 60.047 44.000 0.00 0.00 43.13 3.02
2757 3172 6.351711 CCACCAATCTCTAAGTGAGTCTTCAT 60.352 42.308 0.00 0.00 43.13 2.57
2758 3173 6.534436 CACCAATCTCTAAGTGAGTCTTCATG 59.466 42.308 0.00 0.00 43.13 3.07
2759 3174 6.438741 ACCAATCTCTAAGTGAGTCTTCATGA 59.561 38.462 0.00 0.00 43.13 3.07
2760 3175 6.756074 CCAATCTCTAAGTGAGTCTTCATGAC 59.244 42.308 0.00 0.00 45.67 3.06
2771 3186 3.945179 GTCTTCATGACGCCAAATCATC 58.055 45.455 0.00 0.00 34.49 2.92
2772 3187 2.609002 TCTTCATGACGCCAAATCATCG 59.391 45.455 0.00 0.00 34.49 3.84
2773 3188 1.298602 TCATGACGCCAAATCATCGG 58.701 50.000 0.00 0.00 34.49 4.18
2774 3189 1.016627 CATGACGCCAAATCATCGGT 58.983 50.000 0.00 0.00 34.49 4.69
2775 3190 1.016627 ATGACGCCAAATCATCGGTG 58.983 50.000 0.00 0.00 38.79 4.94
2776 3191 0.036858 TGACGCCAAATCATCGGTGA 60.037 50.000 0.00 0.00 39.04 4.02
2777 3192 0.652592 GACGCCAAATCATCGGTGAG 59.347 55.000 3.97 0.00 37.87 3.51
2778 3193 0.744414 ACGCCAAATCATCGGTGAGG 60.744 55.000 3.97 0.68 37.87 3.86
2779 3194 0.461870 CGCCAAATCATCGGTGAGGA 60.462 55.000 3.97 0.00 37.87 3.71
2780 3195 1.303309 GCCAAATCATCGGTGAGGAG 58.697 55.000 3.97 0.00 37.87 3.69
2781 3196 1.407437 GCCAAATCATCGGTGAGGAGT 60.407 52.381 3.97 0.00 37.87 3.85
2782 3197 2.555199 CCAAATCATCGGTGAGGAGTC 58.445 52.381 3.97 0.00 37.87 3.36
2783 3198 2.093500 CCAAATCATCGGTGAGGAGTCA 60.093 50.000 3.97 0.00 37.87 3.41
2784 3199 3.599343 CAAATCATCGGTGAGGAGTCAA 58.401 45.455 3.97 0.00 37.87 3.18
2785 3200 3.533606 AATCATCGGTGAGGAGTCAAG 57.466 47.619 3.97 0.00 37.87 3.02
2786 3201 1.186200 TCATCGGTGAGGAGTCAAGG 58.814 55.000 0.00 0.00 33.27 3.61
2787 3202 1.186200 CATCGGTGAGGAGTCAAGGA 58.814 55.000 0.00 0.00 33.27 3.36
2788 3203 1.759445 CATCGGTGAGGAGTCAAGGAT 59.241 52.381 0.00 0.00 33.27 3.24
2789 3204 1.186200 TCGGTGAGGAGTCAAGGATG 58.814 55.000 0.00 0.00 33.27 3.51
2790 3205 0.460987 CGGTGAGGAGTCAAGGATGC 60.461 60.000 0.00 0.00 33.27 3.91
2791 3206 0.107459 GGTGAGGAGTCAAGGATGCC 60.107 60.000 0.00 0.00 33.27 4.40
2792 3207 0.615331 GTGAGGAGTCAAGGATGCCA 59.385 55.000 0.00 0.00 33.27 4.92
2793 3208 1.003580 GTGAGGAGTCAAGGATGCCAA 59.996 52.381 0.00 0.00 33.27 4.52
2794 3209 1.280133 TGAGGAGTCAAGGATGCCAAG 59.720 52.381 0.00 0.00 0.00 3.61
2795 3210 0.034670 AGGAGTCAAGGATGCCAAGC 60.035 55.000 0.00 0.00 0.00 4.01
2796 3211 1.034292 GGAGTCAAGGATGCCAAGCC 61.034 60.000 0.00 0.00 0.00 4.35
2797 3212 0.322816 GAGTCAAGGATGCCAAGCCA 60.323 55.000 0.00 0.00 32.71 4.75
2798 3213 0.112995 AGTCAAGGATGCCAAGCCAA 59.887 50.000 0.00 0.00 32.71 4.52
2799 3214 0.529378 GTCAAGGATGCCAAGCCAAG 59.471 55.000 0.00 0.00 32.71 3.61
2800 3215 0.112995 TCAAGGATGCCAAGCCAAGT 59.887 50.000 0.00 0.00 32.71 3.16
2801 3216 0.245539 CAAGGATGCCAAGCCAAGTG 59.754 55.000 0.00 0.00 32.71 3.16
2802 3217 1.538687 AAGGATGCCAAGCCAAGTGC 61.539 55.000 0.00 0.00 41.71 4.40
2803 3218 2.277591 GGATGCCAAGCCAAGTGCA 61.278 57.895 0.00 0.00 44.83 4.57
2804 3219 1.667151 GATGCCAAGCCAAGTGCAA 59.333 52.632 0.00 0.00 44.83 4.08
2805 3220 0.033781 GATGCCAAGCCAAGTGCAAA 59.966 50.000 0.00 0.00 44.83 3.68
2806 3221 0.688487 ATGCCAAGCCAAGTGCAAAT 59.312 45.000 0.00 0.00 44.83 2.32
2807 3222 0.469070 TGCCAAGCCAAGTGCAAATT 59.531 45.000 0.00 0.00 44.83 1.82
2808 3223 1.134159 TGCCAAGCCAAGTGCAAATTT 60.134 42.857 0.00 0.00 44.83 1.82
2809 3224 1.948834 GCCAAGCCAAGTGCAAATTTT 59.051 42.857 0.00 0.00 44.83 1.82
2810 3225 2.287129 GCCAAGCCAAGTGCAAATTTTG 60.287 45.455 4.72 4.72 44.83 2.44
2811 3226 2.291190 CCAAGCCAAGTGCAAATTTTGG 59.709 45.455 10.96 13.36 44.83 3.28
2812 3227 2.944349 CAAGCCAAGTGCAAATTTTGGT 59.056 40.909 16.95 6.28 44.83 3.67
2813 3228 2.837498 AGCCAAGTGCAAATTTTGGTC 58.163 42.857 16.95 11.57 44.83 4.02
2814 3229 1.872952 GCCAAGTGCAAATTTTGGTCC 59.127 47.619 16.95 0.00 42.60 4.46
2815 3230 2.744494 GCCAAGTGCAAATTTTGGTCCA 60.744 45.455 16.95 0.00 42.60 4.02
2816 3231 3.539604 CCAAGTGCAAATTTTGGTCCAA 58.460 40.909 10.96 0.00 37.24 3.53
2817 3232 3.944015 CCAAGTGCAAATTTTGGTCCAAA 59.056 39.130 13.26 13.26 37.24 3.28
2818 3233 4.579753 CCAAGTGCAAATTTTGGTCCAAAT 59.420 37.500 17.79 1.05 37.24 2.32
2819 3234 5.067544 CCAAGTGCAAATTTTGGTCCAAATT 59.932 36.000 17.79 11.53 37.24 1.82
2820 3235 6.200808 CAAGTGCAAATTTTGGTCCAAATTC 58.799 36.000 17.79 6.42 33.19 2.17
2821 3236 4.511082 AGTGCAAATTTTGGTCCAAATTCG 59.489 37.500 17.79 10.12 33.19 3.34
2822 3237 4.509600 GTGCAAATTTTGGTCCAAATTCGA 59.490 37.500 17.79 3.39 33.19 3.71
2823 3238 5.007136 GTGCAAATTTTGGTCCAAATTCGAA 59.993 36.000 17.79 0.00 33.19 3.71
2824 3239 5.007136 TGCAAATTTTGGTCCAAATTCGAAC 59.993 36.000 17.79 7.23 33.19 3.95
2825 3240 5.007136 GCAAATTTTGGTCCAAATTCGAACA 59.993 36.000 17.79 1.52 33.19 3.18
2826 3241 6.648502 CAAATTTTGGTCCAAATTCGAACAG 58.351 36.000 17.79 0.00 33.19 3.16
2827 3242 4.993029 TTTTGGTCCAAATTCGAACAGT 57.007 36.364 17.79 0.00 33.19 3.55
2828 3243 3.980646 TTGGTCCAAATTCGAACAGTG 57.019 42.857 0.40 0.00 0.00 3.66
2829 3244 3.201353 TGGTCCAAATTCGAACAGTGA 57.799 42.857 0.00 0.00 0.00 3.41
2830 3245 3.546724 TGGTCCAAATTCGAACAGTGAA 58.453 40.909 0.00 0.00 0.00 3.18
2831 3246 3.314080 TGGTCCAAATTCGAACAGTGAAC 59.686 43.478 0.00 0.00 0.00 3.18
2832 3247 3.304458 GGTCCAAATTCGAACAGTGAACC 60.304 47.826 0.00 0.00 0.00 3.62
2833 3248 3.564225 GTCCAAATTCGAACAGTGAACCT 59.436 43.478 0.00 0.00 0.00 3.50
2834 3249 4.753107 GTCCAAATTCGAACAGTGAACCTA 59.247 41.667 0.00 0.00 0.00 3.08
2835 3250 4.753107 TCCAAATTCGAACAGTGAACCTAC 59.247 41.667 0.00 0.00 0.00 3.18
2836 3251 4.513692 CCAAATTCGAACAGTGAACCTACA 59.486 41.667 0.00 0.00 0.00 2.74
2837 3252 5.181245 CCAAATTCGAACAGTGAACCTACAT 59.819 40.000 0.00 0.00 0.00 2.29
2838 3253 6.293955 CCAAATTCGAACAGTGAACCTACATT 60.294 38.462 0.00 0.00 0.00 2.71
2839 3254 5.862924 ATTCGAACAGTGAACCTACATTG 57.137 39.130 0.00 0.00 34.48 2.82
2840 3255 3.659786 TCGAACAGTGAACCTACATTGG 58.340 45.455 0.00 0.00 32.99 3.16
2841 3256 3.322541 TCGAACAGTGAACCTACATTGGA 59.677 43.478 0.00 0.00 32.99 3.53
2842 3257 4.062293 CGAACAGTGAACCTACATTGGAA 58.938 43.478 0.00 0.00 32.99 3.53
2843 3258 4.695455 CGAACAGTGAACCTACATTGGAAT 59.305 41.667 0.00 0.00 32.99 3.01
2844 3259 5.872617 CGAACAGTGAACCTACATTGGAATA 59.127 40.000 0.00 0.00 32.99 1.75
2845 3260 6.036083 CGAACAGTGAACCTACATTGGAATAG 59.964 42.308 0.00 0.00 32.99 1.73
2846 3261 5.745227 ACAGTGAACCTACATTGGAATAGG 58.255 41.667 0.00 0.00 43.26 2.57
2847 3262 5.487488 ACAGTGAACCTACATTGGAATAGGA 59.513 40.000 0.00 0.00 40.53 2.94
2848 3263 6.051717 CAGTGAACCTACATTGGAATAGGAG 58.948 44.000 4.33 0.00 40.53 3.69
2849 3264 5.131142 AGTGAACCTACATTGGAATAGGAGG 59.869 44.000 4.33 0.00 40.53 4.30
2850 3265 5.036916 TGAACCTACATTGGAATAGGAGGT 58.963 41.667 4.33 0.00 40.53 3.85
2851 3266 5.104527 TGAACCTACATTGGAATAGGAGGTG 60.105 44.000 4.33 0.00 40.53 4.00
2852 3267 4.631234 ACCTACATTGGAATAGGAGGTGA 58.369 43.478 4.33 0.00 40.53 4.02
2853 3268 4.656112 ACCTACATTGGAATAGGAGGTGAG 59.344 45.833 4.33 0.00 40.53 3.51
2854 3269 4.656112 CCTACATTGGAATAGGAGGTGAGT 59.344 45.833 0.00 0.00 40.53 3.41
2855 3270 5.839063 CCTACATTGGAATAGGAGGTGAGTA 59.161 44.000 0.00 0.00 40.53 2.59
2856 3271 5.878406 ACATTGGAATAGGAGGTGAGTAG 57.122 43.478 0.00 0.00 0.00 2.57
2857 3272 4.101741 ACATTGGAATAGGAGGTGAGTAGC 59.898 45.833 0.00 0.00 0.00 3.58
2858 3273 3.398318 TGGAATAGGAGGTGAGTAGCA 57.602 47.619 0.00 0.00 0.00 3.49
2859 3274 3.300388 TGGAATAGGAGGTGAGTAGCAG 58.700 50.000 0.00 0.00 0.00 4.24
2860 3275 3.052869 TGGAATAGGAGGTGAGTAGCAGA 60.053 47.826 0.00 0.00 0.00 4.26
2861 3276 4.156477 GGAATAGGAGGTGAGTAGCAGAT 58.844 47.826 0.00 0.00 0.00 2.90
2862 3277 4.591072 GGAATAGGAGGTGAGTAGCAGATT 59.409 45.833 0.00 0.00 0.00 2.40
2863 3278 5.279256 GGAATAGGAGGTGAGTAGCAGATTC 60.279 48.000 0.00 0.00 0.00 2.52
2864 3279 3.396685 AGGAGGTGAGTAGCAGATTCT 57.603 47.619 0.00 0.00 0.00 2.40
2865 3280 3.718723 AGGAGGTGAGTAGCAGATTCTT 58.281 45.455 0.00 0.00 0.00 2.52
2866 3281 3.450457 AGGAGGTGAGTAGCAGATTCTTG 59.550 47.826 0.00 0.00 0.00 3.02
2867 3282 3.194062 GAGGTGAGTAGCAGATTCTTGC 58.806 50.000 0.00 1.33 44.41 4.01
2868 3283 2.568956 AGGTGAGTAGCAGATTCTTGCA 59.431 45.455 9.67 0.00 46.47 4.08
2869 3284 2.675348 GGTGAGTAGCAGATTCTTGCAC 59.325 50.000 9.67 0.00 46.47 4.57
2870 3285 3.594134 GTGAGTAGCAGATTCTTGCACT 58.406 45.455 9.67 9.90 46.47 4.40
2871 3286 3.999663 GTGAGTAGCAGATTCTTGCACTT 59.000 43.478 9.67 0.00 46.47 3.16
2872 3287 3.999001 TGAGTAGCAGATTCTTGCACTTG 59.001 43.478 9.67 0.00 46.47 3.16
2873 3288 2.746362 AGTAGCAGATTCTTGCACTTGC 59.254 45.455 9.67 0.00 46.47 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.036098 CTCCAATGCAGGCACCCA 59.964 61.111 0.00 0.00 0.00 4.51
68 69 4.600692 AGCTGAAACCCCAAACAAATAC 57.399 40.909 0.00 0.00 0.00 1.89
212 213 6.237648 GCTTGCACTTGATAAAAATGATTCCG 60.238 38.462 0.00 0.00 0.00 4.30
378 382 8.575589 AGAAGCTCACACACTGATATATAAGAG 58.424 37.037 3.90 0.00 0.00 2.85
382 386 8.695456 TCAAAGAAGCTCACACACTGATATATA 58.305 33.333 0.00 0.00 0.00 0.86
385 389 5.798132 TCAAAGAAGCTCACACACTGATAT 58.202 37.500 0.00 0.00 0.00 1.63
388 392 3.541996 TCAAAGAAGCTCACACACTGA 57.458 42.857 0.00 0.00 0.00 3.41
398 402 4.340381 GGGTATGCATCAATCAAAGAAGCT 59.660 41.667 0.19 0.00 31.50 3.74
401 405 5.105392 GGTTGGGTATGCATCAATCAAAGAA 60.105 40.000 0.19 0.00 0.00 2.52
428 432 3.160545 GTGCGAAAAATGTATCACACCG 58.839 45.455 0.00 0.00 0.00 4.94
430 434 3.057876 TGGGTGCGAAAAATGTATCACAC 60.058 43.478 0.00 0.00 0.00 3.82
462 466 8.150945 ACATAATAGTTGGCCAGAATACACTAG 58.849 37.037 15.88 7.02 0.00 2.57
487 491 5.237344 CCCTCGGAATTCAAGATATCAACAC 59.763 44.000 7.93 0.00 0.00 3.32
497 501 2.928116 GTTACGACCCTCGGAATTCAAG 59.072 50.000 7.93 4.04 45.33 3.02
506 510 1.471287 TCATGTGAGTTACGACCCTCG 59.529 52.381 0.00 0.00 46.93 4.63
749 941 2.605366 GCCTAAGCTGACGATTCTTCAC 59.395 50.000 0.00 0.00 35.50 3.18
768 960 4.458295 CCATCTCCACATTATTCATCAGCC 59.542 45.833 0.00 0.00 0.00 4.85
916 1108 4.240888 CGTGAACTCATGACTCATCAGTT 58.759 43.478 7.95 7.95 38.57 3.16
994 1186 0.036732 AAAGACCGCTCCATTGCTCA 59.963 50.000 0.00 0.00 0.00 4.26
1079 1274 2.541466 TCTCAGGGTCCTTCTTTCCTC 58.459 52.381 0.00 0.00 0.00 3.71
1266 1464 2.593468 ATTCCACCACGGCGAGATGG 62.593 60.000 16.62 14.02 42.13 3.51
1427 1625 5.219343 TCTAATGCATCAGGTCACCATAG 57.781 43.478 0.00 0.00 0.00 2.23
1435 1633 5.367937 AGGTACAGAATCTAATGCATCAGGT 59.632 40.000 0.00 0.00 0.00 4.00
1463 1661 1.737355 TTGCCAGGCTTGCACAGAAC 61.737 55.000 13.43 0.00 38.72 3.01
1480 1678 3.112580 GACATGGTGTTTGTTTCGGTTG 58.887 45.455 0.00 0.00 0.00 3.77
1482 1680 2.650322 AGACATGGTGTTTGTTTCGGT 58.350 42.857 0.00 0.00 0.00 4.69
1488 1686 8.237811 AGAGAAAAATAAGACATGGTGTTTGT 57.762 30.769 0.00 0.00 0.00 2.83
1509 1707 1.066573 GCTGTGCTTTGGCTAGAGAGA 60.067 52.381 0.00 0.00 39.59 3.10
1510 1708 1.367659 GCTGTGCTTTGGCTAGAGAG 58.632 55.000 0.00 0.00 39.59 3.20
1666 1869 2.483877 TGATTCAGCTACAAGGTTTGCG 59.516 45.455 0.00 0.00 0.00 4.85
1701 1904 2.158769 TGGCTGTGTTCTGCTATATGGG 60.159 50.000 0.00 0.00 38.34 4.00
1702 1905 3.198409 TGGCTGTGTTCTGCTATATGG 57.802 47.619 0.00 0.00 38.34 2.74
1704 1907 3.567164 GCAATGGCTGTGTTCTGCTATAT 59.433 43.478 0.00 0.00 38.34 0.86
1801 2199 3.195610 AGTGACCGTTATCATCAGCTTCA 59.804 43.478 0.00 0.00 0.00 3.02
1828 2226 2.168521 CTCCGGCTTTCCTGATACTTCA 59.831 50.000 0.00 0.00 0.00 3.02
1839 2237 2.409870 CCATGGTGCTCCGGCTTTC 61.410 63.158 2.57 0.00 39.59 2.62
1928 2337 4.804139 CGAGAAATTGTACTCCGCTACATT 59.196 41.667 0.00 0.00 0.00 2.71
1940 2349 5.407502 TCTTCGCAGAATCGAGAAATTGTA 58.592 37.500 0.00 0.00 45.90 2.41
1959 2368 2.779506 ACACTTCGGGGTGAATTCTTC 58.220 47.619 7.05 0.06 40.13 2.87
2018 2427 2.352912 CCACCCGAAATTTAAAACCCCG 60.353 50.000 0.00 0.00 0.00 5.73
2032 2441 1.760875 GACCAGCTATCCCACCCGA 60.761 63.158 0.00 0.00 0.00 5.14
2127 2536 1.534729 GCACAGGGTTTCCGAATTCT 58.465 50.000 3.52 0.00 38.33 2.40
2298 2713 2.410322 ATCACGCAAAGGCACCTCCA 62.410 55.000 0.00 0.00 41.24 3.86
2387 2802 0.740868 TGCAGCAGCCGAACTCATAC 60.741 55.000 0.00 0.00 41.13 2.39
2412 2827 2.906389 ACCACTTGATAGCACTTCAGGA 59.094 45.455 0.00 0.00 0.00 3.86
2415 2830 3.515502 AGCTACCACTTGATAGCACTTCA 59.484 43.478 5.39 0.00 45.22 3.02
2416 2831 3.868077 CAGCTACCACTTGATAGCACTTC 59.132 47.826 5.39 0.00 45.22 3.01
2417 2832 3.261897 ACAGCTACCACTTGATAGCACTT 59.738 43.478 5.39 0.00 45.22 3.16
2418 2833 2.834549 ACAGCTACCACTTGATAGCACT 59.165 45.455 5.39 0.00 45.22 4.40
2419 2834 3.252974 ACAGCTACCACTTGATAGCAC 57.747 47.619 5.39 0.00 45.22 4.40
2420 2835 3.181475 GCTACAGCTACCACTTGATAGCA 60.181 47.826 5.39 0.00 45.22 3.49
2421 2836 3.181475 TGCTACAGCTACCACTTGATAGC 60.181 47.826 2.44 0.00 43.49 2.97
2422 2837 4.142160 TGTGCTACAGCTACCACTTGATAG 60.142 45.833 2.44 0.00 42.66 2.08
2423 2838 3.767131 TGTGCTACAGCTACCACTTGATA 59.233 43.478 2.44 0.00 42.66 2.15
2424 2839 2.567169 TGTGCTACAGCTACCACTTGAT 59.433 45.455 2.44 0.00 42.66 2.57
2425 2840 1.967779 TGTGCTACAGCTACCACTTGA 59.032 47.619 2.44 0.00 42.66 3.02
2453 2868 3.932089 GCAAGTCTTTTGCCTTGTTTCAA 59.068 39.130 0.54 0.00 40.13 2.69
2454 2869 3.520569 GCAAGTCTTTTGCCTTGTTTCA 58.479 40.909 0.54 0.00 40.13 2.69
2463 2878 3.648339 TGAAGATGGCAAGTCTTTTGC 57.352 42.857 4.93 3.39 44.22 3.68
2464 2879 5.775686 TCAATGAAGATGGCAAGTCTTTTG 58.224 37.500 4.93 6.81 36.13 2.44
2465 2880 6.600882 ATCAATGAAGATGGCAAGTCTTTT 57.399 33.333 4.93 0.00 36.13 2.27
2466 2881 6.600882 AATCAATGAAGATGGCAAGTCTTT 57.399 33.333 4.93 0.00 36.13 2.52
2467 2882 7.613022 TCTTAATCAATGAAGATGGCAAGTCTT 59.387 33.333 3.08 3.08 38.57 3.01
2468 2883 7.114754 TCTTAATCAATGAAGATGGCAAGTCT 58.885 34.615 0.00 0.00 0.00 3.24
2469 2884 7.325660 TCTTAATCAATGAAGATGGCAAGTC 57.674 36.000 0.00 0.00 0.00 3.01
2470 2885 7.613022 TCTTCTTAATCAATGAAGATGGCAAGT 59.387 33.333 0.00 0.00 40.54 3.16
2471 2886 7.993101 TCTTCTTAATCAATGAAGATGGCAAG 58.007 34.615 0.00 0.00 40.54 4.01
2472 2887 7.943079 TCTTCTTAATCAATGAAGATGGCAA 57.057 32.000 0.00 0.00 40.54 4.52
2473 2888 7.067859 CCTTCTTCTTAATCAATGAAGATGGCA 59.932 37.037 17.63 0.00 45.85 4.92
2474 2889 7.424001 CCTTCTTCTTAATCAATGAAGATGGC 58.576 38.462 17.63 0.00 45.85 4.40
2487 2902 9.397280 GGCTTATGTCTAAACCTTCTTCTTAAT 57.603 33.333 0.00 0.00 0.00 1.40
2488 2903 8.380099 TGGCTTATGTCTAAACCTTCTTCTTAA 58.620 33.333 0.00 0.00 0.00 1.85
2489 2904 7.822822 GTGGCTTATGTCTAAACCTTCTTCTTA 59.177 37.037 0.00 0.00 0.00 2.10
2490 2905 6.655425 GTGGCTTATGTCTAAACCTTCTTCTT 59.345 38.462 0.00 0.00 0.00 2.52
2491 2906 6.174049 GTGGCTTATGTCTAAACCTTCTTCT 58.826 40.000 0.00 0.00 0.00 2.85
2492 2907 5.063564 CGTGGCTTATGTCTAAACCTTCTTC 59.936 44.000 0.00 0.00 0.00 2.87
2493 2908 4.935808 CGTGGCTTATGTCTAAACCTTCTT 59.064 41.667 0.00 0.00 0.00 2.52
2494 2909 4.222145 TCGTGGCTTATGTCTAAACCTTCT 59.778 41.667 0.00 0.00 0.00 2.85
2495 2910 4.501071 TCGTGGCTTATGTCTAAACCTTC 58.499 43.478 0.00 0.00 0.00 3.46
2496 2911 4.504858 CTCGTGGCTTATGTCTAAACCTT 58.495 43.478 0.00 0.00 0.00 3.50
2497 2912 3.118738 CCTCGTGGCTTATGTCTAAACCT 60.119 47.826 0.00 0.00 0.00 3.50
2498 2913 3.195661 CCTCGTGGCTTATGTCTAAACC 58.804 50.000 0.00 0.00 0.00 3.27
2512 2927 2.255252 CTTTTTGCCGCCTCGTGG 59.745 61.111 0.00 0.00 36.10 4.94
2513 2928 1.791103 TTCCTTTTTGCCGCCTCGTG 61.791 55.000 0.00 0.00 0.00 4.35
2514 2929 1.104577 TTTCCTTTTTGCCGCCTCGT 61.105 50.000 0.00 0.00 0.00 4.18
2515 2930 0.031449 TTTTCCTTTTTGCCGCCTCG 59.969 50.000 0.00 0.00 0.00 4.63
2516 2931 1.605457 CCTTTTCCTTTTTGCCGCCTC 60.605 52.381 0.00 0.00 0.00 4.70
2517 2932 0.392706 CCTTTTCCTTTTTGCCGCCT 59.607 50.000 0.00 0.00 0.00 5.52
2518 2933 0.105964 ACCTTTTCCTTTTTGCCGCC 59.894 50.000 0.00 0.00 0.00 6.13
2519 2934 1.068588 AGACCTTTTCCTTTTTGCCGC 59.931 47.619 0.00 0.00 0.00 6.53
2520 2935 3.568430 AGTAGACCTTTTCCTTTTTGCCG 59.432 43.478 0.00 0.00 0.00 5.69
2521 2936 4.827835 AGAGTAGACCTTTTCCTTTTTGCC 59.172 41.667 0.00 0.00 0.00 4.52
2522 2937 5.334182 CGAGAGTAGACCTTTTCCTTTTTGC 60.334 44.000 0.00 0.00 0.00 3.68
2523 2938 5.334182 GCGAGAGTAGACCTTTTCCTTTTTG 60.334 44.000 0.00 0.00 0.00 2.44
2524 2939 4.755629 GCGAGAGTAGACCTTTTCCTTTTT 59.244 41.667 0.00 0.00 0.00 1.94
2525 2940 4.316645 GCGAGAGTAGACCTTTTCCTTTT 58.683 43.478 0.00 0.00 0.00 2.27
2526 2941 3.614390 CGCGAGAGTAGACCTTTTCCTTT 60.614 47.826 0.00 0.00 0.00 3.11
2527 2942 2.094649 CGCGAGAGTAGACCTTTTCCTT 60.095 50.000 0.00 0.00 0.00 3.36
2528 2943 1.473278 CGCGAGAGTAGACCTTTTCCT 59.527 52.381 0.00 0.00 0.00 3.36
2529 2944 1.471684 TCGCGAGAGTAGACCTTTTCC 59.528 52.381 3.71 0.00 34.84 3.13
2530 2945 2.095364 TGTCGCGAGAGTAGACCTTTTC 60.095 50.000 10.24 0.00 43.49 2.29
2531 2946 1.884579 TGTCGCGAGAGTAGACCTTTT 59.115 47.619 10.24 0.00 43.49 2.27
2532 2947 1.531423 TGTCGCGAGAGTAGACCTTT 58.469 50.000 10.24 0.00 43.49 3.11
2533 2948 1.752683 ATGTCGCGAGAGTAGACCTT 58.247 50.000 10.24 0.00 43.49 3.50
2534 2949 2.613133 GTTATGTCGCGAGAGTAGACCT 59.387 50.000 10.24 0.00 43.49 3.85
2535 2950 2.353889 TGTTATGTCGCGAGAGTAGACC 59.646 50.000 10.24 0.00 43.49 3.85
2536 2951 3.063725 ACTGTTATGTCGCGAGAGTAGAC 59.936 47.826 10.24 6.60 43.49 2.59
2537 2952 3.268330 ACTGTTATGTCGCGAGAGTAGA 58.732 45.455 10.24 0.00 43.49 2.59
2538 2953 3.677190 ACTGTTATGTCGCGAGAGTAG 57.323 47.619 10.24 8.14 43.49 2.57
2539 2954 4.872124 TCTTACTGTTATGTCGCGAGAGTA 59.128 41.667 10.24 3.30 43.49 2.59
2540 2955 3.688185 TCTTACTGTTATGTCGCGAGAGT 59.312 43.478 10.24 4.46 43.49 3.24
2541 2956 4.029704 GTCTTACTGTTATGTCGCGAGAG 58.970 47.826 10.24 0.00 43.49 3.20
2542 2957 3.181503 GGTCTTACTGTTATGTCGCGAGA 60.182 47.826 10.24 9.54 38.16 4.04
2543 2958 3.106672 GGTCTTACTGTTATGTCGCGAG 58.893 50.000 10.24 0.00 0.00 5.03
2544 2959 2.488937 TGGTCTTACTGTTATGTCGCGA 59.511 45.455 3.71 3.71 0.00 5.87
2545 2960 2.852413 CTGGTCTTACTGTTATGTCGCG 59.148 50.000 0.00 0.00 0.00 5.87
2546 2961 4.106029 TCTGGTCTTACTGTTATGTCGC 57.894 45.455 0.00 0.00 0.00 5.19
2547 2962 5.520288 CCATTCTGGTCTTACTGTTATGTCG 59.480 44.000 0.00 0.00 31.35 4.35
2548 2963 5.817816 CCCATTCTGGTCTTACTGTTATGTC 59.182 44.000 0.00 0.00 35.17 3.06
2549 2964 5.745227 CCCATTCTGGTCTTACTGTTATGT 58.255 41.667 0.00 0.00 35.17 2.29
2550 2965 4.576463 GCCCATTCTGGTCTTACTGTTATG 59.424 45.833 0.00 0.00 35.17 1.90
2551 2966 4.385310 GGCCCATTCTGGTCTTACTGTTAT 60.385 45.833 0.00 0.00 35.17 1.89
2552 2967 3.054655 GGCCCATTCTGGTCTTACTGTTA 60.055 47.826 0.00 0.00 35.17 2.41
2553 2968 2.290960 GGCCCATTCTGGTCTTACTGTT 60.291 50.000 0.00 0.00 35.17 3.16
2554 2969 1.282157 GGCCCATTCTGGTCTTACTGT 59.718 52.381 0.00 0.00 35.17 3.55
2555 2970 1.561542 AGGCCCATTCTGGTCTTACTG 59.438 52.381 0.00 0.00 36.85 2.74
2556 2971 1.840635 GAGGCCCATTCTGGTCTTACT 59.159 52.381 0.00 0.00 41.49 2.24
2557 2972 1.134068 GGAGGCCCATTCTGGTCTTAC 60.134 57.143 0.00 0.00 41.49 2.34
2558 2973 1.213296 GGAGGCCCATTCTGGTCTTA 58.787 55.000 0.00 0.00 41.49 2.10
2559 2974 0.551131 AGGAGGCCCATTCTGGTCTT 60.551 55.000 0.00 0.00 41.49 3.01
2560 2975 0.985490 GAGGAGGCCCATTCTGGTCT 60.985 60.000 0.00 0.00 44.99 3.85
2561 2976 0.985490 AGAGGAGGCCCATTCTGGTC 60.985 60.000 0.00 0.00 35.17 4.02
2562 2977 0.551131 AAGAGGAGGCCCATTCTGGT 60.551 55.000 0.00 0.00 35.17 4.00
2563 2978 0.627986 AAAGAGGAGGCCCATTCTGG 59.372 55.000 0.00 0.00 37.25 3.86
2564 2979 1.283029 TCAAAGAGGAGGCCCATTCTG 59.717 52.381 0.00 0.00 33.88 3.02
2565 2980 1.673767 TCAAAGAGGAGGCCCATTCT 58.326 50.000 0.00 0.00 33.88 2.40
2566 2981 2.744352 ATCAAAGAGGAGGCCCATTC 57.256 50.000 0.00 0.00 33.88 2.67
2567 2982 3.479866 AAATCAAAGAGGAGGCCCATT 57.520 42.857 0.00 0.00 33.88 3.16
2568 2983 3.479866 AAAATCAAAGAGGAGGCCCAT 57.520 42.857 0.00 0.00 33.88 4.00
2569 2984 2.899256 CAAAAATCAAAGAGGAGGCCCA 59.101 45.455 0.00 0.00 33.88 5.36
2570 2985 2.354103 GCAAAAATCAAAGAGGAGGCCC 60.354 50.000 0.00 0.00 0.00 5.80
2571 2986 2.672195 CGCAAAAATCAAAGAGGAGGCC 60.672 50.000 0.00 0.00 0.00 5.19
2572 2987 2.228822 TCGCAAAAATCAAAGAGGAGGC 59.771 45.455 0.00 0.00 0.00 4.70
2573 2988 4.708726 ATCGCAAAAATCAAAGAGGAGG 57.291 40.909 0.00 0.00 0.00 4.30
2574 2989 6.611381 TGTTATCGCAAAAATCAAAGAGGAG 58.389 36.000 0.00 0.00 0.00 3.69
2575 2990 6.567687 TGTTATCGCAAAAATCAAAGAGGA 57.432 33.333 0.00 0.00 0.00 3.71
2576 2991 7.201461 CCATTGTTATCGCAAAAATCAAAGAGG 60.201 37.037 0.00 0.00 31.63 3.69
2577 2992 7.541783 TCCATTGTTATCGCAAAAATCAAAGAG 59.458 33.333 0.00 0.00 31.63 2.85
2578 2993 7.374272 TCCATTGTTATCGCAAAAATCAAAGA 58.626 30.769 0.00 0.00 31.63 2.52
2579 2994 7.201461 CCTCCATTGTTATCGCAAAAATCAAAG 60.201 37.037 0.00 0.00 31.63 2.77
2580 2995 6.589523 CCTCCATTGTTATCGCAAAAATCAAA 59.410 34.615 0.00 0.00 31.63 2.69
2581 2996 6.098679 CCTCCATTGTTATCGCAAAAATCAA 58.901 36.000 0.00 0.00 31.63 2.57
2582 2997 5.184864 ACCTCCATTGTTATCGCAAAAATCA 59.815 36.000 0.00 0.00 31.63 2.57
2583 2998 5.650543 ACCTCCATTGTTATCGCAAAAATC 58.349 37.500 0.00 0.00 31.63 2.17
2584 2999 5.650543 GACCTCCATTGTTATCGCAAAAAT 58.349 37.500 0.00 0.00 31.63 1.82
2585 3000 4.378978 CGACCTCCATTGTTATCGCAAAAA 60.379 41.667 0.00 0.00 31.63 1.94
2586 3001 3.126171 CGACCTCCATTGTTATCGCAAAA 59.874 43.478 0.00 0.00 31.63 2.44
2587 3002 2.675844 CGACCTCCATTGTTATCGCAAA 59.324 45.455 0.00 0.00 31.63 3.68
2588 3003 2.276201 CGACCTCCATTGTTATCGCAA 58.724 47.619 0.00 0.00 0.00 4.85
2589 3004 1.472552 CCGACCTCCATTGTTATCGCA 60.473 52.381 0.00 0.00 0.00 5.10
2590 3005 1.217882 CCGACCTCCATTGTTATCGC 58.782 55.000 0.00 0.00 0.00 4.58
2591 3006 1.540363 CCCCGACCTCCATTGTTATCG 60.540 57.143 0.00 0.00 0.00 2.92
2592 3007 1.814248 GCCCCGACCTCCATTGTTATC 60.814 57.143 0.00 0.00 0.00 1.75
2593 3008 0.182775 GCCCCGACCTCCATTGTTAT 59.817 55.000 0.00 0.00 0.00 1.89
2594 3009 1.202099 TGCCCCGACCTCCATTGTTA 61.202 55.000 0.00 0.00 0.00 2.41
2595 3010 2.355115 GCCCCGACCTCCATTGTT 59.645 61.111 0.00 0.00 0.00 2.83
2596 3011 2.933287 TGCCCCGACCTCCATTGT 60.933 61.111 0.00 0.00 0.00 2.71
2597 3012 2.124570 CTGCCCCGACCTCCATTG 60.125 66.667 0.00 0.00 0.00 2.82
2598 3013 2.285368 TCTGCCCCGACCTCCATT 60.285 61.111 0.00 0.00 0.00 3.16
2599 3014 2.765807 CTCTGCCCCGACCTCCAT 60.766 66.667 0.00 0.00 0.00 3.41
2600 3015 3.992641 TCTCTGCCCCGACCTCCA 61.993 66.667 0.00 0.00 0.00 3.86
2601 3016 3.462678 GTCTCTGCCCCGACCTCC 61.463 72.222 0.00 0.00 0.00 4.30
2602 3017 1.617947 AATGTCTCTGCCCCGACCTC 61.618 60.000 0.00 0.00 0.00 3.85
2603 3018 1.201429 AAATGTCTCTGCCCCGACCT 61.201 55.000 0.00 0.00 0.00 3.85
2604 3019 0.322546 AAAATGTCTCTGCCCCGACC 60.323 55.000 0.00 0.00 0.00 4.79
2605 3020 0.804989 CAAAATGTCTCTGCCCCGAC 59.195 55.000 0.00 0.00 0.00 4.79
2606 3021 0.690192 TCAAAATGTCTCTGCCCCGA 59.310 50.000 0.00 0.00 0.00 5.14
2607 3022 1.533625 TTCAAAATGTCTCTGCCCCG 58.466 50.000 0.00 0.00 0.00 5.73
2608 3023 4.335400 TTTTTCAAAATGTCTCTGCCCC 57.665 40.909 0.00 0.00 0.00 5.80
2609 3024 5.990996 TGAATTTTTCAAAATGTCTCTGCCC 59.009 36.000 0.00 0.00 38.53 5.36
2610 3025 7.515643 CATGAATTTTTCAAAATGTCTCTGCC 58.484 34.615 0.00 0.00 43.95 4.85
2611 3026 7.013529 GCATGAATTTTTCAAAATGTCTCTGC 58.986 34.615 0.00 8.06 43.95 4.26
2612 3027 7.224710 CGCATGAATTTTTCAAAATGTCTCTG 58.775 34.615 0.00 3.71 43.95 3.35
2613 3028 6.128742 GCGCATGAATTTTTCAAAATGTCTCT 60.129 34.615 0.30 0.00 43.95 3.10
2614 3029 6.011277 GCGCATGAATTTTTCAAAATGTCTC 58.989 36.000 0.30 0.00 43.95 3.36
2615 3030 5.697633 AGCGCATGAATTTTTCAAAATGTCT 59.302 32.000 11.47 0.00 43.95 3.41
2616 3031 5.786574 CAGCGCATGAATTTTTCAAAATGTC 59.213 36.000 11.47 0.96 43.95 3.06
2617 3032 5.681880 CAGCGCATGAATTTTTCAAAATGT 58.318 33.333 11.47 0.00 43.95 2.71
2618 3033 4.551892 GCAGCGCATGAATTTTTCAAAATG 59.448 37.500 11.47 0.00 43.95 2.32
2619 3034 4.667161 CGCAGCGCATGAATTTTTCAAAAT 60.667 37.500 11.47 0.00 43.95 1.82
2620 3035 3.362791 CGCAGCGCATGAATTTTTCAAAA 60.363 39.130 11.47 0.00 43.95 2.44
2621 3036 2.155347 CGCAGCGCATGAATTTTTCAAA 59.845 40.909 11.47 0.00 43.95 2.69
2622 3037 1.720316 CGCAGCGCATGAATTTTTCAA 59.280 42.857 11.47 0.00 43.95 2.69
2623 3038 1.338765 CGCAGCGCATGAATTTTTCA 58.661 45.000 11.47 0.00 45.01 2.69
2638 3053 3.056891 TGGGAAATTTTAAAGGAGCGCAG 60.057 43.478 11.47 0.00 0.00 5.18
2639 3054 2.894126 TGGGAAATTTTAAAGGAGCGCA 59.106 40.909 11.47 0.00 0.00 6.09
2640 3055 3.250744 GTGGGAAATTTTAAAGGAGCGC 58.749 45.455 0.00 0.00 0.00 5.92
2641 3056 3.189702 TCGTGGGAAATTTTAAAGGAGCG 59.810 43.478 0.00 0.00 0.00 5.03
2642 3057 4.457949 TCTCGTGGGAAATTTTAAAGGAGC 59.542 41.667 0.00 0.00 0.00 4.70
2643 3058 5.472137 TGTCTCGTGGGAAATTTTAAAGGAG 59.528 40.000 0.00 2.32 0.00 3.69
2644 3059 5.378332 TGTCTCGTGGGAAATTTTAAAGGA 58.622 37.500 0.00 0.00 0.00 3.36
2645 3060 5.699097 TGTCTCGTGGGAAATTTTAAAGG 57.301 39.130 0.00 0.00 0.00 3.11
2646 3061 5.629435 GCTTGTCTCGTGGGAAATTTTAAAG 59.371 40.000 0.00 0.00 0.00 1.85
2647 3062 5.067936 TGCTTGTCTCGTGGGAAATTTTAAA 59.932 36.000 0.00 0.00 0.00 1.52
2648 3063 4.580995 TGCTTGTCTCGTGGGAAATTTTAA 59.419 37.500 0.00 0.00 0.00 1.52
2649 3064 4.138290 TGCTTGTCTCGTGGGAAATTTTA 58.862 39.130 0.00 0.00 0.00 1.52
2650 3065 2.955660 TGCTTGTCTCGTGGGAAATTTT 59.044 40.909 0.00 0.00 0.00 1.82
2651 3066 2.582052 TGCTTGTCTCGTGGGAAATTT 58.418 42.857 0.00 0.00 0.00 1.82
2652 3067 2.270352 TGCTTGTCTCGTGGGAAATT 57.730 45.000 0.00 0.00 0.00 1.82
2653 3068 2.290260 TGATGCTTGTCTCGTGGGAAAT 60.290 45.455 0.00 0.00 0.00 2.17
2654 3069 1.071542 TGATGCTTGTCTCGTGGGAAA 59.928 47.619 0.00 0.00 0.00 3.13
2655 3070 0.684535 TGATGCTTGTCTCGTGGGAA 59.315 50.000 0.00 0.00 0.00 3.97
2656 3071 0.904649 ATGATGCTTGTCTCGTGGGA 59.095 50.000 0.00 0.00 0.00 4.37
2657 3072 1.293924 GATGATGCTTGTCTCGTGGG 58.706 55.000 0.00 0.00 0.00 4.61
2658 3073 2.014335 TGATGATGCTTGTCTCGTGG 57.986 50.000 0.00 0.00 0.00 4.94
2659 3074 2.350804 CCTTGATGATGCTTGTCTCGTG 59.649 50.000 0.00 0.00 0.00 4.35
2660 3075 2.234661 TCCTTGATGATGCTTGTCTCGT 59.765 45.455 0.00 0.00 0.00 4.18
2661 3076 2.864946 CTCCTTGATGATGCTTGTCTCG 59.135 50.000 0.00 0.00 0.00 4.04
2662 3077 3.204526 CCTCCTTGATGATGCTTGTCTC 58.795 50.000 0.00 0.00 0.00 3.36
2663 3078 2.683152 GCCTCCTTGATGATGCTTGTCT 60.683 50.000 0.00 0.00 0.00 3.41
2664 3079 1.674962 GCCTCCTTGATGATGCTTGTC 59.325 52.381 0.00 0.00 0.00 3.18
2665 3080 1.760192 GCCTCCTTGATGATGCTTGT 58.240 50.000 0.00 0.00 0.00 3.16
2666 3081 0.661552 CGCCTCCTTGATGATGCTTG 59.338 55.000 0.00 0.00 0.00 4.01
2667 3082 0.543277 TCGCCTCCTTGATGATGCTT 59.457 50.000 0.00 0.00 0.00 3.91
2668 3083 0.763652 ATCGCCTCCTTGATGATGCT 59.236 50.000 0.00 0.00 0.00 3.79
2669 3084 0.873054 CATCGCCTCCTTGATGATGC 59.127 55.000 0.00 0.00 43.68 3.91
2670 3085 1.520494 CCATCGCCTCCTTGATGATG 58.480 55.000 3.89 0.00 43.68 3.07
2671 3086 0.250640 GCCATCGCCTCCTTGATGAT 60.251 55.000 3.89 0.00 43.68 2.45
2672 3087 1.146930 GCCATCGCCTCCTTGATGA 59.853 57.895 3.89 0.00 43.68 2.92
2673 3088 3.741860 GCCATCGCCTCCTTGATG 58.258 61.111 0.00 0.00 41.27 3.07
2683 3098 1.889573 GCTACAGGAAGGCCATCGC 60.890 63.158 5.01 0.00 36.29 4.58
2684 3099 1.227674 GGCTACAGGAAGGCCATCG 60.228 63.158 5.01 0.00 44.69 3.84
2685 3100 4.887615 GGCTACAGGAAGGCCATC 57.112 61.111 5.01 0.92 44.69 3.51
2688 3103 0.981277 TAGGTGGCTACAGGAAGGCC 60.981 60.000 1.52 0.00 45.45 5.19
2689 3104 0.909623 TTAGGTGGCTACAGGAAGGC 59.090 55.000 1.52 0.00 42.19 4.35
2690 3105 1.209747 GGTTAGGTGGCTACAGGAAGG 59.790 57.143 1.52 0.00 0.00 3.46
2691 3106 2.168728 GAGGTTAGGTGGCTACAGGAAG 59.831 54.545 1.52 0.00 0.00 3.46
2692 3107 2.185387 GAGGTTAGGTGGCTACAGGAA 58.815 52.381 1.52 0.00 0.00 3.36
2693 3108 1.621622 GGAGGTTAGGTGGCTACAGGA 60.622 57.143 1.52 0.00 0.00 3.86
2694 3109 0.831307 GGAGGTTAGGTGGCTACAGG 59.169 60.000 1.52 0.00 0.00 4.00
2695 3110 1.207329 GTGGAGGTTAGGTGGCTACAG 59.793 57.143 1.52 0.00 0.00 2.74
2696 3111 1.272807 GTGGAGGTTAGGTGGCTACA 58.727 55.000 1.52 0.00 0.00 2.74
2697 3112 0.540454 GGTGGAGGTTAGGTGGCTAC 59.460 60.000 0.00 0.00 0.00 3.58
2698 3113 0.117541 TGGTGGAGGTTAGGTGGCTA 59.882 55.000 0.00 0.00 0.00 3.93
2699 3114 0.550147 ATGGTGGAGGTTAGGTGGCT 60.550 55.000 0.00 0.00 0.00 4.75
2700 3115 0.331616 AATGGTGGAGGTTAGGTGGC 59.668 55.000 0.00 0.00 0.00 5.01
2701 3116 3.617284 GTTAATGGTGGAGGTTAGGTGG 58.383 50.000 0.00 0.00 0.00 4.61
2702 3117 3.617284 GGTTAATGGTGGAGGTTAGGTG 58.383 50.000 0.00 0.00 0.00 4.00
2703 3118 2.237893 CGGTTAATGGTGGAGGTTAGGT 59.762 50.000 0.00 0.00 0.00 3.08
2704 3119 2.914059 CGGTTAATGGTGGAGGTTAGG 58.086 52.381 0.00 0.00 0.00 2.69
2705 3120 2.285977 GCGGTTAATGGTGGAGGTTAG 58.714 52.381 0.00 0.00 0.00 2.34
2706 3121 1.065272 GGCGGTTAATGGTGGAGGTTA 60.065 52.381 0.00 0.00 0.00 2.85
2707 3122 0.323087 GGCGGTTAATGGTGGAGGTT 60.323 55.000 0.00 0.00 0.00 3.50
2708 3123 1.205460 AGGCGGTTAATGGTGGAGGT 61.205 55.000 0.00 0.00 0.00 3.85
2709 3124 0.034477 AAGGCGGTTAATGGTGGAGG 60.034 55.000 0.00 0.00 0.00 4.30
2710 3125 1.094785 CAAGGCGGTTAATGGTGGAG 58.905 55.000 0.00 0.00 0.00 3.86
2711 3126 0.693622 TCAAGGCGGTTAATGGTGGA 59.306 50.000 0.00 0.00 0.00 4.02
2712 3127 1.094785 CTCAAGGCGGTTAATGGTGG 58.905 55.000 0.00 0.00 0.00 4.61
2713 3128 0.451783 GCTCAAGGCGGTTAATGGTG 59.548 55.000 0.00 0.00 0.00 4.17
2714 3129 0.679960 GGCTCAAGGCGGTTAATGGT 60.680 55.000 0.00 0.00 42.94 3.55
2715 3130 0.679640 TGGCTCAAGGCGGTTAATGG 60.680 55.000 0.00 0.00 44.42 3.16
2716 3131 0.451783 GTGGCTCAAGGCGGTTAATG 59.548 55.000 0.00 0.00 44.42 1.90
2717 3132 0.679960 GGTGGCTCAAGGCGGTTAAT 60.680 55.000 0.00 0.00 44.42 1.40
2718 3133 1.302993 GGTGGCTCAAGGCGGTTAA 60.303 57.895 0.00 0.00 44.42 2.01
2719 3134 2.058125 TTGGTGGCTCAAGGCGGTTA 62.058 55.000 0.00 0.00 44.42 2.85
2720 3135 2.713531 ATTGGTGGCTCAAGGCGGTT 62.714 55.000 0.00 0.00 44.42 4.44
2721 3136 3.210012 ATTGGTGGCTCAAGGCGGT 62.210 57.895 0.00 0.00 44.42 5.68
2722 3137 2.361610 ATTGGTGGCTCAAGGCGG 60.362 61.111 0.00 0.00 44.42 6.13
2723 3138 1.372087 GAGATTGGTGGCTCAAGGCG 61.372 60.000 0.00 0.00 44.42 5.52
2724 3139 0.034670 AGAGATTGGTGGCTCAAGGC 60.035 55.000 0.00 0.00 41.50 4.35
2725 3140 3.054802 ACTTAGAGATTGGTGGCTCAAGG 60.055 47.826 0.00 0.00 33.62 3.61
2726 3141 3.937706 CACTTAGAGATTGGTGGCTCAAG 59.062 47.826 0.00 0.00 33.62 3.02
2727 3142 3.582647 TCACTTAGAGATTGGTGGCTCAA 59.417 43.478 0.00 0.00 33.62 3.02
2728 3143 3.173151 TCACTTAGAGATTGGTGGCTCA 58.827 45.455 0.00 0.00 33.62 4.26
2729 3144 3.895232 TCACTTAGAGATTGGTGGCTC 57.105 47.619 0.00 0.00 0.00 4.70
2741 3156 3.119459 GGCGTCATGAAGACTCACTTAGA 60.119 47.826 13.18 0.00 45.32 2.10
2742 3157 3.182967 GGCGTCATGAAGACTCACTTAG 58.817 50.000 13.18 0.00 45.32 2.18
2743 3158 2.560981 TGGCGTCATGAAGACTCACTTA 59.439 45.455 15.80 0.00 45.32 2.24
2744 3159 1.344438 TGGCGTCATGAAGACTCACTT 59.656 47.619 15.80 0.00 45.32 3.16
2745 3160 0.969149 TGGCGTCATGAAGACTCACT 59.031 50.000 15.80 0.00 45.32 3.41
2746 3161 1.795768 TTGGCGTCATGAAGACTCAC 58.204 50.000 15.80 0.00 45.32 3.51
2747 3162 2.542020 TTTGGCGTCATGAAGACTCA 57.458 45.000 15.80 5.96 45.32 3.41
2748 3163 3.002791 TGATTTGGCGTCATGAAGACTC 58.997 45.455 15.80 5.73 45.32 3.36
2749 3164 3.057969 TGATTTGGCGTCATGAAGACT 57.942 42.857 15.80 0.00 45.32 3.24
2750 3165 3.544834 CGATGATTTGGCGTCATGAAGAC 60.545 47.826 13.18 10.48 44.02 3.01
2751 3166 2.609002 CGATGATTTGGCGTCATGAAGA 59.391 45.455 13.18 0.00 36.49 2.87
2752 3167 2.286595 CCGATGATTTGGCGTCATGAAG 60.287 50.000 4.06 4.06 36.49 3.02
2753 3168 1.670295 CCGATGATTTGGCGTCATGAA 59.330 47.619 0.00 0.00 36.49 2.57
2754 3169 1.298602 CCGATGATTTGGCGTCATGA 58.701 50.000 0.00 0.00 36.49 3.07
2755 3170 1.016627 ACCGATGATTTGGCGTCATG 58.983 50.000 0.00 0.00 36.49 3.07
2756 3171 1.016627 CACCGATGATTTGGCGTCAT 58.983 50.000 0.00 0.28 38.94 3.06
2757 3172 0.036858 TCACCGATGATTTGGCGTCA 60.037 50.000 0.00 0.00 0.00 4.35
2758 3173 0.652592 CTCACCGATGATTTGGCGTC 59.347 55.000 0.00 0.00 33.22 5.19
2759 3174 0.744414 CCTCACCGATGATTTGGCGT 60.744 55.000 0.00 0.00 33.22 5.68
2760 3175 0.461870 TCCTCACCGATGATTTGGCG 60.462 55.000 0.00 0.00 33.22 5.69
2761 3176 1.303309 CTCCTCACCGATGATTTGGC 58.697 55.000 0.00 0.00 33.22 4.52
2762 3177 2.093500 TGACTCCTCACCGATGATTTGG 60.093 50.000 0.00 0.00 33.22 3.28
2763 3178 3.251479 TGACTCCTCACCGATGATTTG 57.749 47.619 0.00 0.00 33.22 2.32
2764 3179 3.369892 CCTTGACTCCTCACCGATGATTT 60.370 47.826 0.00 0.00 33.22 2.17
2765 3180 2.169352 CCTTGACTCCTCACCGATGATT 59.831 50.000 0.00 0.00 33.22 2.57
2766 3181 1.759445 CCTTGACTCCTCACCGATGAT 59.241 52.381 0.00 0.00 33.22 2.45
2767 3182 1.186200 CCTTGACTCCTCACCGATGA 58.814 55.000 0.00 0.00 0.00 2.92
2768 3183 1.186200 TCCTTGACTCCTCACCGATG 58.814 55.000 0.00 0.00 0.00 3.84
2769 3184 1.759445 CATCCTTGACTCCTCACCGAT 59.241 52.381 0.00 0.00 0.00 4.18
2770 3185 1.186200 CATCCTTGACTCCTCACCGA 58.814 55.000 0.00 0.00 0.00 4.69
2771 3186 0.460987 GCATCCTTGACTCCTCACCG 60.461 60.000 0.00 0.00 0.00 4.94
2772 3187 0.107459 GGCATCCTTGACTCCTCACC 60.107 60.000 0.00 0.00 0.00 4.02
2773 3188 0.615331 TGGCATCCTTGACTCCTCAC 59.385 55.000 0.00 0.00 0.00 3.51
2774 3189 1.280133 CTTGGCATCCTTGACTCCTCA 59.720 52.381 0.00 0.00 0.00 3.86
2775 3190 2.016096 GCTTGGCATCCTTGACTCCTC 61.016 57.143 0.00 0.00 0.00 3.71
2776 3191 0.034670 GCTTGGCATCCTTGACTCCT 60.035 55.000 0.00 0.00 0.00 3.69
2777 3192 1.034292 GGCTTGGCATCCTTGACTCC 61.034 60.000 0.00 0.00 0.00 3.85
2778 3193 0.322816 TGGCTTGGCATCCTTGACTC 60.323 55.000 7.65 0.00 0.00 3.36
2779 3194 0.112995 TTGGCTTGGCATCCTTGACT 59.887 50.000 7.65 0.00 0.00 3.41
2780 3195 0.529378 CTTGGCTTGGCATCCTTGAC 59.471 55.000 7.65 0.00 0.00 3.18
2781 3196 0.112995 ACTTGGCTTGGCATCCTTGA 59.887 50.000 7.65 0.00 0.00 3.02
2782 3197 0.245539 CACTTGGCTTGGCATCCTTG 59.754 55.000 7.65 3.72 0.00 3.61
2783 3198 1.538687 GCACTTGGCTTGGCATCCTT 61.539 55.000 7.65 0.00 40.25 3.36
2784 3199 1.980772 GCACTTGGCTTGGCATCCT 60.981 57.895 7.65 0.00 40.25 3.24
2785 3200 1.818959 TTGCACTTGGCTTGGCATCC 61.819 55.000 0.00 0.00 45.15 3.51
2786 3201 0.033781 TTTGCACTTGGCTTGGCATC 59.966 50.000 0.00 0.00 45.15 3.91
2787 3202 0.688487 ATTTGCACTTGGCTTGGCAT 59.312 45.000 0.00 0.00 45.15 4.40
2788 3203 0.469070 AATTTGCACTTGGCTTGGCA 59.531 45.000 0.00 0.00 45.15 4.92
2789 3204 1.596603 AAATTTGCACTTGGCTTGGC 58.403 45.000 0.00 0.00 45.15 4.52
2790 3205 2.291190 CCAAAATTTGCACTTGGCTTGG 59.709 45.455 0.00 0.00 45.15 3.61
2791 3206 2.944349 ACCAAAATTTGCACTTGGCTTG 59.056 40.909 13.38 2.01 42.88 4.01
2792 3207 3.205338 GACCAAAATTTGCACTTGGCTT 58.795 40.909 13.38 0.00 42.88 4.35
2793 3208 2.485302 GGACCAAAATTTGCACTTGGCT 60.485 45.455 13.38 4.38 42.88 4.75
2794 3209 1.872952 GGACCAAAATTTGCACTTGGC 59.127 47.619 13.38 8.15 42.88 4.52
2795 3210 3.191078 TGGACCAAAATTTGCACTTGG 57.809 42.857 12.33 12.33 44.35 3.61
2796 3211 5.754543 ATTTGGACCAAAATTTGCACTTG 57.245 34.783 23.11 0.00 36.90 3.16
2797 3212 5.007528 CGAATTTGGACCAAAATTTGCACTT 59.992 36.000 23.11 10.42 39.31 3.16
2798 3213 4.511082 CGAATTTGGACCAAAATTTGCACT 59.489 37.500 23.11 1.67 39.31 4.40
2799 3214 4.509600 TCGAATTTGGACCAAAATTTGCAC 59.490 37.500 23.11 8.84 39.31 4.57
2800 3215 4.697514 TCGAATTTGGACCAAAATTTGCA 58.302 34.783 23.11 0.00 39.31 4.08
2801 3216 5.007136 TGTTCGAATTTGGACCAAAATTTGC 59.993 36.000 23.11 12.28 39.31 3.68
2802 3217 6.257630 ACTGTTCGAATTTGGACCAAAATTTG 59.742 34.615 23.11 18.66 39.31 2.32
2803 3218 6.257630 CACTGTTCGAATTTGGACCAAAATTT 59.742 34.615 23.11 13.97 39.31 1.82
2804 3219 5.752955 CACTGTTCGAATTTGGACCAAAATT 59.247 36.000 23.11 16.56 41.34 1.82
2805 3220 5.068460 TCACTGTTCGAATTTGGACCAAAAT 59.932 36.000 23.11 15.52 36.90 1.82
2806 3221 4.399618 TCACTGTTCGAATTTGGACCAAAA 59.600 37.500 23.11 4.33 36.90 2.44
2807 3222 3.948473 TCACTGTTCGAATTTGGACCAAA 59.052 39.130 21.68 21.68 37.75 3.28
2808 3223 3.546724 TCACTGTTCGAATTTGGACCAA 58.453 40.909 1.69 1.69 0.00 3.67
2809 3224 3.201353 TCACTGTTCGAATTTGGACCA 57.799 42.857 0.00 0.00 0.00 4.02
2810 3225 3.304458 GGTTCACTGTTCGAATTTGGACC 60.304 47.826 14.80 14.80 0.00 4.46
2811 3226 3.564225 AGGTTCACTGTTCGAATTTGGAC 59.436 43.478 0.00 3.88 0.00 4.02
2812 3227 3.815809 AGGTTCACTGTTCGAATTTGGA 58.184 40.909 0.00 0.00 0.00 3.53
2813 3228 4.513692 TGTAGGTTCACTGTTCGAATTTGG 59.486 41.667 0.00 0.00 0.00 3.28
2814 3229 5.666969 TGTAGGTTCACTGTTCGAATTTG 57.333 39.130 0.00 0.00 0.00 2.32
2815 3230 6.293955 CCAATGTAGGTTCACTGTTCGAATTT 60.294 38.462 0.00 0.00 0.00 1.82
2816 3231 5.181245 CCAATGTAGGTTCACTGTTCGAATT 59.819 40.000 0.00 0.00 0.00 2.17
2817 3232 4.695455 CCAATGTAGGTTCACTGTTCGAAT 59.305 41.667 0.00 0.00 0.00 3.34
2818 3233 4.062293 CCAATGTAGGTTCACTGTTCGAA 58.938 43.478 0.00 0.00 0.00 3.71
2819 3234 3.322541 TCCAATGTAGGTTCACTGTTCGA 59.677 43.478 0.00 0.00 0.00 3.71
2820 3235 3.659786 TCCAATGTAGGTTCACTGTTCG 58.340 45.455 0.00 0.00 0.00 3.95
2821 3236 6.316390 CCTATTCCAATGTAGGTTCACTGTTC 59.684 42.308 0.00 0.00 34.14 3.18
2822 3237 6.012858 TCCTATTCCAATGTAGGTTCACTGTT 60.013 38.462 0.00 0.00 38.84 3.16
2823 3238 5.487488 TCCTATTCCAATGTAGGTTCACTGT 59.513 40.000 0.00 0.00 38.84 3.55
2824 3239 5.989477 TCCTATTCCAATGTAGGTTCACTG 58.011 41.667 0.00 0.00 38.84 3.66
2825 3240 5.131142 CCTCCTATTCCAATGTAGGTTCACT 59.869 44.000 0.00 0.00 38.84 3.41
2826 3241 5.104485 ACCTCCTATTCCAATGTAGGTTCAC 60.104 44.000 0.00 0.00 38.84 3.18
2827 3242 5.036916 ACCTCCTATTCCAATGTAGGTTCA 58.963 41.667 0.00 0.00 38.84 3.18
2828 3243 5.130477 TCACCTCCTATTCCAATGTAGGTTC 59.870 44.000 0.00 0.00 38.84 3.62
2829 3244 5.036916 TCACCTCCTATTCCAATGTAGGTT 58.963 41.667 0.00 0.00 38.84 3.50
2830 3245 4.631234 TCACCTCCTATTCCAATGTAGGT 58.369 43.478 0.00 0.00 38.84 3.08
2831 3246 4.656112 ACTCACCTCCTATTCCAATGTAGG 59.344 45.833 0.00 0.00 39.06 3.18
2832 3247 5.878406 ACTCACCTCCTATTCCAATGTAG 57.122 43.478 0.00 0.00 0.00 2.74
2833 3248 5.304614 GCTACTCACCTCCTATTCCAATGTA 59.695 44.000 0.00 0.00 0.00 2.29
2834 3249 4.101741 GCTACTCACCTCCTATTCCAATGT 59.898 45.833 0.00 0.00 0.00 2.71
2835 3250 4.101585 TGCTACTCACCTCCTATTCCAATG 59.898 45.833 0.00 0.00 0.00 2.82
2836 3251 4.298626 TGCTACTCACCTCCTATTCCAAT 58.701 43.478 0.00 0.00 0.00 3.16
2837 3252 3.706594 CTGCTACTCACCTCCTATTCCAA 59.293 47.826 0.00 0.00 0.00 3.53
2838 3253 3.052869 TCTGCTACTCACCTCCTATTCCA 60.053 47.826 0.00 0.00 0.00 3.53
2839 3254 3.567397 TCTGCTACTCACCTCCTATTCC 58.433 50.000 0.00 0.00 0.00 3.01
2840 3255 5.538433 AGAATCTGCTACTCACCTCCTATTC 59.462 44.000 0.00 0.00 0.00 1.75
2841 3256 5.463154 AGAATCTGCTACTCACCTCCTATT 58.537 41.667 0.00 0.00 0.00 1.73
2842 3257 5.073437 AGAATCTGCTACTCACCTCCTAT 57.927 43.478 0.00 0.00 0.00 2.57
2843 3258 4.528076 AGAATCTGCTACTCACCTCCTA 57.472 45.455 0.00 0.00 0.00 2.94
2844 3259 3.396685 AGAATCTGCTACTCACCTCCT 57.603 47.619 0.00 0.00 0.00 3.69
2845 3260 3.791245 CAAGAATCTGCTACTCACCTCC 58.209 50.000 0.00 0.00 0.00 4.30
2846 3261 3.194062 GCAAGAATCTGCTACTCACCTC 58.806 50.000 0.00 0.00 39.34 3.85
2847 3262 2.568956 TGCAAGAATCTGCTACTCACCT 59.431 45.455 6.33 0.00 43.07 4.00
2848 3263 2.675348 GTGCAAGAATCTGCTACTCACC 59.325 50.000 0.00 0.00 43.07 4.02
2849 3264 3.594134 AGTGCAAGAATCTGCTACTCAC 58.406 45.455 0.00 0.00 43.07 3.51
2850 3265 3.969287 AGTGCAAGAATCTGCTACTCA 57.031 42.857 0.00 0.00 43.07 3.41
2851 3266 3.181512 GCAAGTGCAAGAATCTGCTACTC 60.182 47.826 0.00 0.00 43.07 2.59
2852 3267 2.746362 GCAAGTGCAAGAATCTGCTACT 59.254 45.455 0.00 5.60 43.07 2.57
2853 3268 3.128465 GCAAGTGCAAGAATCTGCTAC 57.872 47.619 0.00 3.96 43.07 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.