Multiple sequence alignment - TraesCS6D01G088900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G088900 chr6D 100.000 2480 0 0 1 2480 53851158 53848679 0.000000e+00 4580.0
1 TraesCS6D01G088900 chr6D 84.198 424 51 12 1785 2195 210760761 210760341 4.970000e-107 398.0
2 TraesCS6D01G088900 chr6A 92.976 1025 38 13 749 1751 61185477 61186489 0.000000e+00 1463.0
3 TraesCS6D01G088900 chr6A 85.175 1059 93 34 729 1751 61136473 61137503 0.000000e+00 1027.0
4 TraesCS6D01G088900 chr6A 88.087 277 21 5 2203 2479 61186464 61186728 3.980000e-83 318.0
5 TraesCS6D01G088900 chr6A 90.141 213 16 5 2206 2416 61137481 61137690 3.140000e-69 272.0
6 TraesCS6D01G088900 chr6B 86.936 1041 83 31 580 1585 117630367 117631389 0.000000e+00 1120.0
7 TraesCS6D01G088900 chr6B 84.652 847 63 34 729 1538 117588641 117589457 0.000000e+00 782.0
8 TraesCS6D01G088900 chr6B 85.190 736 63 21 739 1455 117540919 117541627 0.000000e+00 713.0
9 TraesCS6D01G088900 chr6B 84.244 476 68 4 57 526 563291725 563292199 8.080000e-125 457.0
10 TraesCS6D01G088900 chr6B 89.964 279 27 1 2203 2480 117631485 117631763 2.350000e-95 359.0
11 TraesCS6D01G088900 chr6B 89.873 158 16 0 2203 2360 117541861 117542018 1.160000e-48 204.0
12 TraesCS6D01G088900 chr6B 97.674 86 2 0 2395 2480 117542019 117542104 5.530000e-32 148.0
13 TraesCS6D01G088900 chr6B 79.688 192 24 8 1567 1751 117541703 117541886 9.310000e-25 124.0
14 TraesCS6D01G088900 chrUn 84.023 532 76 7 1 526 359466735 359467263 1.020000e-138 503.0
15 TraesCS6D01G088900 chr7A 84.023 532 76 7 1 526 31535624 31536152 1.020000e-138 503.0
16 TraesCS6D01G088900 chr7A 83.647 532 78 7 1 526 31554065 31554593 2.220000e-135 492.0
17 TraesCS6D01G088900 chr3D 83.582 536 73 10 1 526 456777219 456777749 2.870000e-134 488.0
18 TraesCS6D01G088900 chr3D 83.476 466 67 6 66 526 347448462 347448002 2.280000e-115 425.0
19 TraesCS6D01G088900 chr3D 84.382 429 42 19 1786 2195 549470912 549471334 4.970000e-107 398.0
20 TraesCS6D01G088900 chr3D 82.783 424 56 15 1785 2195 235002824 235002405 1.810000e-96 363.0
21 TraesCS6D01G088900 chr3D 80.870 460 61 22 1761 2195 234772879 234773336 1.100000e-88 337.0
22 TraesCS6D01G088900 chr3D 83.193 119 6 5 1761 1865 42683078 42682960 2.030000e-16 97.1
23 TraesCS6D01G088900 chr1A 83.613 537 71 7 8 529 125990940 125990406 2.870000e-134 488.0
24 TraesCS6D01G088900 chr1D 85.011 447 62 3 84 526 204986698 204986253 1.350000e-122 449.0
25 TraesCS6D01G088900 chr5D 82.075 530 85 3 1 526 386986349 386985826 6.290000e-121 444.0
26 TraesCS6D01G088900 chr5D 84.211 399 53 9 1804 2193 226987846 226988243 1.800000e-101 379.0
27 TraesCS6D01G088900 chr5D 83.412 422 54 14 1785 2195 157204446 157204862 6.470000e-101 377.0
28 TraesCS6D01G088900 chr5D 82.619 420 58 14 1786 2194 156351953 156352368 8.430000e-95 357.0
29 TraesCS6D01G088900 chr4B 84.651 430 48 15 1785 2198 358473384 358472957 1.770000e-111 412.0
30 TraesCS6D01G088900 chr4B 83.055 419 51 18 1790 2194 501336836 501336424 1.810000e-96 363.0
31 TraesCS6D01G088900 chr2B 82.588 425 53 18 1787 2195 377880758 377880339 3.030000e-94 355.0
32 TraesCS6D01G088900 chr3A 76.384 542 103 13 1 526 428567270 428567802 4.070000e-68 268.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G088900 chr6D 53848679 53851158 2479 True 4580.00 4580 100.00000 1 2480 1 chr6D.!!$R1 2479
1 TraesCS6D01G088900 chr6A 61185477 61186728 1251 False 890.50 1463 90.53150 749 2479 2 chr6A.!!$F2 1730
2 TraesCS6D01G088900 chr6A 61136473 61137690 1217 False 649.50 1027 87.65800 729 2416 2 chr6A.!!$F1 1687
3 TraesCS6D01G088900 chr6B 117588641 117589457 816 False 782.00 782 84.65200 729 1538 1 chr6B.!!$F1 809
4 TraesCS6D01G088900 chr6B 117630367 117631763 1396 False 739.50 1120 88.45000 580 2480 2 chr6B.!!$F4 1900
5 TraesCS6D01G088900 chr6B 117540919 117542104 1185 False 297.25 713 88.10625 739 2480 4 chr6B.!!$F3 1741
6 TraesCS6D01G088900 chrUn 359466735 359467263 528 False 503.00 503 84.02300 1 526 1 chrUn.!!$F1 525
7 TraesCS6D01G088900 chr7A 31535624 31536152 528 False 503.00 503 84.02300 1 526 1 chr7A.!!$F1 525
8 TraesCS6D01G088900 chr7A 31554065 31554593 528 False 492.00 492 83.64700 1 526 1 chr7A.!!$F2 525
9 TraesCS6D01G088900 chr3D 456777219 456777749 530 False 488.00 488 83.58200 1 526 1 chr3D.!!$F2 525
10 TraesCS6D01G088900 chr1A 125990406 125990940 534 True 488.00 488 83.61300 8 529 1 chr1A.!!$R1 521
11 TraesCS6D01G088900 chr5D 386985826 386986349 523 True 444.00 444 82.07500 1 526 1 chr5D.!!$R1 525
12 TraesCS6D01G088900 chr3A 428567270 428567802 532 False 268.00 268 76.38400 1 526 1 chr3A.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 727 0.392461 ACGAGTAATTGCCACGCCAT 60.392 50.0 9.69 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2054 2240 0.034089 GTGGAGATGGTGGGGAAAGG 60.034 60.0 0.0 0.0 0.0 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.129502 CGTCCGACGCCTCCTGTA 61.130 66.667 8.21 0.00 33.65 2.74
37 38 3.771160 CGCCTCCTGTAGCCCGTT 61.771 66.667 0.00 0.00 0.00 4.44
181 183 2.669240 GGGTTCTAGTGCCCGCTT 59.331 61.111 8.25 0.00 34.90 4.68
184 186 1.080025 GTTCTAGTGCCCGCTTCGT 60.080 57.895 0.00 0.00 0.00 3.85
272 275 3.407967 GATGGGGGCGGGTCTGAA 61.408 66.667 0.00 0.00 0.00 3.02
284 287 2.037136 GTCTGAAGCGGCTGTGCAT 61.037 57.895 1.81 0.00 37.31 3.96
317 320 2.125713 CACGTGATGCCGGTGCTA 60.126 61.111 10.90 0.00 38.71 3.49
325 328 4.874977 GCCGGTGCTAGACGAGGC 62.875 72.222 1.90 4.57 40.42 4.70
345 348 0.894184 GGAGTGTCTCGTCCAGTGGA 60.894 60.000 8.12 8.12 32.55 4.02
376 380 2.100989 GTCACTTACCACGGAGGAGAT 58.899 52.381 2.94 0.00 41.22 2.75
414 418 0.674895 GAGGATCAACGCCAAGCAGT 60.675 55.000 0.00 0.00 33.17 4.40
424 428 2.048222 CAAGCAGTTCCGGCTCGA 60.048 61.111 0.00 0.00 41.66 4.04
441 446 1.204704 TCGACATTGAGCAATCCGAGT 59.795 47.619 10.97 0.20 32.74 4.18
473 508 3.741476 GCGAGGGTTGCCAAGCTG 61.741 66.667 6.59 0.00 0.00 4.24
526 561 1.863454 GCAAGGCTACATCGTCATCTG 59.137 52.381 0.00 0.00 0.00 2.90
529 564 1.202463 AGGCTACATCGTCATCTGCAC 60.202 52.381 0.00 0.00 0.00 4.57
530 565 0.848942 GCTACATCGTCATCTGCACG 59.151 55.000 0.00 0.00 38.67 5.34
536 571 2.194800 TCGTCATCTGCACGATCTTC 57.805 50.000 0.00 0.00 41.27 2.87
537 572 1.472480 TCGTCATCTGCACGATCTTCA 59.528 47.619 0.00 0.00 41.27 3.02
538 573 2.094752 TCGTCATCTGCACGATCTTCAA 60.095 45.455 0.00 0.00 41.27 2.69
539 574 2.280971 CGTCATCTGCACGATCTTCAAG 59.719 50.000 0.00 0.00 39.75 3.02
540 575 2.606725 GTCATCTGCACGATCTTCAAGG 59.393 50.000 0.00 0.00 0.00 3.61
541 576 2.497273 TCATCTGCACGATCTTCAAGGA 59.503 45.455 0.00 0.00 0.00 3.36
542 577 3.055891 TCATCTGCACGATCTTCAAGGAA 60.056 43.478 0.00 0.00 0.00 3.36
543 578 3.401033 TCTGCACGATCTTCAAGGAAA 57.599 42.857 0.00 0.00 0.00 3.13
544 579 3.067106 TCTGCACGATCTTCAAGGAAAC 58.933 45.455 0.00 0.00 0.00 2.78
545 580 2.807967 CTGCACGATCTTCAAGGAAACA 59.192 45.455 0.00 0.00 0.00 2.83
546 581 2.807967 TGCACGATCTTCAAGGAAACAG 59.192 45.455 0.00 0.00 0.00 3.16
547 582 2.808543 GCACGATCTTCAAGGAAACAGT 59.191 45.455 0.00 0.00 0.00 3.55
548 583 3.994392 GCACGATCTTCAAGGAAACAGTA 59.006 43.478 0.00 0.00 0.00 2.74
549 584 4.451096 GCACGATCTTCAAGGAAACAGTAA 59.549 41.667 0.00 0.00 0.00 2.24
550 585 5.049680 GCACGATCTTCAAGGAAACAGTAAA 60.050 40.000 0.00 0.00 0.00 2.01
551 586 6.512741 GCACGATCTTCAAGGAAACAGTAAAA 60.513 38.462 0.00 0.00 0.00 1.52
552 587 7.414436 CACGATCTTCAAGGAAACAGTAAAAA 58.586 34.615 0.00 0.00 0.00 1.94
553 588 7.376072 CACGATCTTCAAGGAAACAGTAAAAAC 59.624 37.037 0.00 0.00 0.00 2.43
554 589 7.066525 ACGATCTTCAAGGAAACAGTAAAAACA 59.933 33.333 0.00 0.00 0.00 2.83
555 590 7.913297 CGATCTTCAAGGAAACAGTAAAAACAA 59.087 33.333 0.00 0.00 0.00 2.83
556 591 9.237846 GATCTTCAAGGAAACAGTAAAAACAAG 57.762 33.333 0.00 0.00 0.00 3.16
557 592 7.033185 TCTTCAAGGAAACAGTAAAAACAAGC 58.967 34.615 0.00 0.00 0.00 4.01
558 593 6.274157 TCAAGGAAACAGTAAAAACAAGCA 57.726 33.333 0.00 0.00 0.00 3.91
559 594 6.096695 TCAAGGAAACAGTAAAAACAAGCAC 58.903 36.000 0.00 0.00 0.00 4.40
560 595 5.652994 AGGAAACAGTAAAAACAAGCACA 57.347 34.783 0.00 0.00 0.00 4.57
561 596 6.031751 AGGAAACAGTAAAAACAAGCACAA 57.968 33.333 0.00 0.00 0.00 3.33
562 597 6.099341 AGGAAACAGTAAAAACAAGCACAAG 58.901 36.000 0.00 0.00 0.00 3.16
563 598 6.071616 AGGAAACAGTAAAAACAAGCACAAGA 60.072 34.615 0.00 0.00 0.00 3.02
564 599 6.253512 GGAAACAGTAAAAACAAGCACAAGAG 59.746 38.462 0.00 0.00 0.00 2.85
565 600 6.509418 AACAGTAAAAACAAGCACAAGAGA 57.491 33.333 0.00 0.00 0.00 3.10
566 601 6.509418 ACAGTAAAAACAAGCACAAGAGAA 57.491 33.333 0.00 0.00 0.00 2.87
567 602 6.919721 ACAGTAAAAACAAGCACAAGAGAAA 58.080 32.000 0.00 0.00 0.00 2.52
568 603 7.375053 ACAGTAAAAACAAGCACAAGAGAAAA 58.625 30.769 0.00 0.00 0.00 2.29
569 604 7.542130 ACAGTAAAAACAAGCACAAGAGAAAAG 59.458 33.333 0.00 0.00 0.00 2.27
570 605 7.754924 CAGTAAAAACAAGCACAAGAGAAAAGA 59.245 33.333 0.00 0.00 0.00 2.52
571 606 8.303876 AGTAAAAACAAGCACAAGAGAAAAGAA 58.696 29.630 0.00 0.00 0.00 2.52
572 607 7.961325 AAAAACAAGCACAAGAGAAAAGAAA 57.039 28.000 0.00 0.00 0.00 2.52
573 608 8.552083 AAAAACAAGCACAAGAGAAAAGAAAT 57.448 26.923 0.00 0.00 0.00 2.17
574 609 7.529880 AAACAAGCACAAGAGAAAAGAAATG 57.470 32.000 0.00 0.00 0.00 2.32
575 610 5.594926 ACAAGCACAAGAGAAAAGAAATGG 58.405 37.500 0.00 0.00 0.00 3.16
576 611 5.127682 ACAAGCACAAGAGAAAAGAAATGGT 59.872 36.000 0.00 0.00 0.00 3.55
577 612 6.321181 ACAAGCACAAGAGAAAAGAAATGGTA 59.679 34.615 0.00 0.00 0.00 3.25
578 613 6.959639 AGCACAAGAGAAAAGAAATGGTAA 57.040 33.333 0.00 0.00 0.00 2.85
592 627 8.986477 AAGAAATGGTAAATTTGTCATACTGC 57.014 30.769 0.00 0.00 0.00 4.40
593 628 7.250569 AGAAATGGTAAATTTGTCATACTGCG 58.749 34.615 0.00 0.00 0.00 5.18
684 719 4.092821 TGTCATGCTGTAACGAGTAATTGC 59.907 41.667 0.00 0.00 0.00 3.56
692 727 0.392461 ACGAGTAATTGCCACGCCAT 60.392 50.000 9.69 0.00 0.00 4.40
705 740 3.803715 GCCACGCCATTATACATCTGACT 60.804 47.826 0.00 0.00 0.00 3.41
707 742 3.670523 CACGCCATTATACATCTGACTCG 59.329 47.826 0.00 0.00 0.00 4.18
720 755 6.941218 CATCTGACTCGTGATGTATATTGG 57.059 41.667 0.00 0.00 36.32 3.16
726 761 4.897076 ACTCGTGATGTATATTGGGGTGTA 59.103 41.667 0.00 0.00 0.00 2.90
727 762 5.204409 TCGTGATGTATATTGGGGTGTAC 57.796 43.478 0.00 0.00 0.00 2.90
732 767 2.366266 TGTATATTGGGGTGTACGCTCC 59.634 50.000 18.99 18.99 0.00 4.70
924 993 3.304794 GGCACAACCTATAGCTAGAGACG 60.305 52.174 17.00 6.98 34.51 4.18
1216 1300 1.727830 CGAATTAGAGACGACGACGG 58.272 55.000 12.58 0.00 44.46 4.79
1274 1358 1.847890 GCATTGGTTGCGTACACGGT 61.848 55.000 3.67 0.00 42.54 4.83
1435 1519 0.913205 GGAGAGGGAGGAAAGGGAAC 59.087 60.000 0.00 0.00 0.00 3.62
1480 1646 1.665679 ACAAGCGCGGAATAATGTGAG 59.334 47.619 8.83 0.00 0.00 3.51
1706 1889 6.561737 TGTTGGTAATGTAAATTTCTGCGA 57.438 33.333 0.00 0.00 0.00 5.10
1711 1894 8.514136 TGGTAATGTAAATTTCTGCGAAAAAG 57.486 30.769 0.00 0.00 0.00 2.27
1715 1898 2.455674 AATTTCTGCGAAAAAGCCCC 57.544 45.000 7.59 0.00 36.02 5.80
1746 1932 4.288366 TCAGGTGTTCCAAGTGGATGAATA 59.712 41.667 0.00 0.00 44.98 1.75
1756 1942 6.428385 CAAGTGGATGAATACTCTTGGAAC 57.572 41.667 8.76 0.00 31.79 3.62
1757 1943 5.104259 AGTGGATGAATACTCTTGGAACC 57.896 43.478 0.00 0.00 0.00 3.62
1758 1944 4.785376 AGTGGATGAATACTCTTGGAACCT 59.215 41.667 0.00 0.00 0.00 3.50
1759 1945 5.104735 AGTGGATGAATACTCTTGGAACCTC 60.105 44.000 0.00 0.00 0.00 3.85
1760 1946 4.141937 TGGATGAATACTCTTGGAACCTCG 60.142 45.833 0.00 0.00 0.00 4.63
1761 1947 4.141914 GGATGAATACTCTTGGAACCTCGT 60.142 45.833 0.00 0.00 0.00 4.18
1762 1948 4.188247 TGAATACTCTTGGAACCTCGTG 57.812 45.455 0.00 0.00 0.00 4.35
1763 1949 3.576982 TGAATACTCTTGGAACCTCGTGT 59.423 43.478 0.00 0.00 0.00 4.49
1764 1950 3.594603 ATACTCTTGGAACCTCGTGTG 57.405 47.619 0.00 0.00 0.00 3.82
1765 1951 1.410004 ACTCTTGGAACCTCGTGTGA 58.590 50.000 0.00 0.00 0.00 3.58
1766 1952 1.971357 ACTCTTGGAACCTCGTGTGAT 59.029 47.619 0.00 0.00 0.00 3.06
1767 1953 2.368875 ACTCTTGGAACCTCGTGTGATT 59.631 45.455 0.00 0.00 0.00 2.57
1768 1954 2.738846 CTCTTGGAACCTCGTGTGATTG 59.261 50.000 0.00 0.00 0.00 2.67
1769 1955 2.104111 TCTTGGAACCTCGTGTGATTGT 59.896 45.455 0.00 0.00 0.00 2.71
1770 1956 2.631160 TGGAACCTCGTGTGATTGTT 57.369 45.000 0.00 0.00 0.00 2.83
1771 1957 2.489971 TGGAACCTCGTGTGATTGTTC 58.510 47.619 0.00 0.00 36.11 3.18
1772 1958 2.104111 TGGAACCTCGTGTGATTGTTCT 59.896 45.455 0.00 0.00 36.63 3.01
1773 1959 2.737252 GGAACCTCGTGTGATTGTTCTC 59.263 50.000 0.00 0.00 36.63 2.87
1774 1960 2.065993 ACCTCGTGTGATTGTTCTCG 57.934 50.000 0.00 0.00 0.00 4.04
1775 1961 1.340248 ACCTCGTGTGATTGTTCTCGT 59.660 47.619 0.00 0.00 0.00 4.18
1776 1962 2.223971 ACCTCGTGTGATTGTTCTCGTT 60.224 45.455 0.00 0.00 0.00 3.85
1777 1963 2.155732 CCTCGTGTGATTGTTCTCGTTG 59.844 50.000 0.00 0.00 0.00 4.10
1778 1964 3.049912 CTCGTGTGATTGTTCTCGTTGA 58.950 45.455 0.00 0.00 0.00 3.18
1779 1965 3.649073 TCGTGTGATTGTTCTCGTTGAT 58.351 40.909 0.00 0.00 0.00 2.57
1780 1966 4.055360 TCGTGTGATTGTTCTCGTTGATT 58.945 39.130 0.00 0.00 0.00 2.57
1781 1967 4.509970 TCGTGTGATTGTTCTCGTTGATTT 59.490 37.500 0.00 0.00 0.00 2.17
1782 1968 4.608470 CGTGTGATTGTTCTCGTTGATTTG 59.392 41.667 0.00 0.00 0.00 2.32
1783 1969 5.558083 CGTGTGATTGTTCTCGTTGATTTGA 60.558 40.000 0.00 0.00 0.00 2.69
1784 1970 5.848036 GTGTGATTGTTCTCGTTGATTTGAG 59.152 40.000 0.00 0.00 0.00 3.02
1785 1971 5.527214 TGTGATTGTTCTCGTTGATTTGAGT 59.473 36.000 0.00 0.00 33.88 3.41
1786 1972 5.848036 GTGATTGTTCTCGTTGATTTGAGTG 59.152 40.000 0.00 0.00 33.88 3.51
1787 1973 5.527214 TGATTGTTCTCGTTGATTTGAGTGT 59.473 36.000 0.00 0.00 33.88 3.55
1788 1974 5.811399 TTGTTCTCGTTGATTTGAGTGTT 57.189 34.783 0.00 0.00 33.88 3.32
1789 1975 5.811399 TGTTCTCGTTGATTTGAGTGTTT 57.189 34.783 0.00 0.00 33.88 2.83
1790 1976 5.806286 TGTTCTCGTTGATTTGAGTGTTTC 58.194 37.500 0.00 0.00 33.88 2.78
1791 1977 5.205565 GTTCTCGTTGATTTGAGTGTTTCC 58.794 41.667 0.00 0.00 33.88 3.13
1792 1978 4.703897 TCTCGTTGATTTGAGTGTTTCCT 58.296 39.130 0.00 0.00 33.88 3.36
1793 1979 4.750098 TCTCGTTGATTTGAGTGTTTCCTC 59.250 41.667 0.00 0.00 33.88 3.71
1794 1980 3.493129 TCGTTGATTTGAGTGTTTCCTCG 59.507 43.478 0.00 0.00 34.04 4.63
1795 1981 3.247648 CGTTGATTTGAGTGTTTCCTCGT 59.752 43.478 0.00 0.00 34.04 4.18
1796 1982 4.527564 GTTGATTTGAGTGTTTCCTCGTG 58.472 43.478 0.00 0.00 34.04 4.35
1797 1983 3.804036 TGATTTGAGTGTTTCCTCGTGT 58.196 40.909 0.00 0.00 34.04 4.49
1798 1984 4.951254 TGATTTGAGTGTTTCCTCGTGTA 58.049 39.130 0.00 0.00 34.04 2.90
1799 1985 5.547465 TGATTTGAGTGTTTCCTCGTGTAT 58.453 37.500 0.00 0.00 34.04 2.29
1800 1986 5.995282 TGATTTGAGTGTTTCCTCGTGTATT 59.005 36.000 0.00 0.00 34.04 1.89
1801 1987 5.917541 TTTGAGTGTTTCCTCGTGTATTC 57.082 39.130 0.00 0.00 34.04 1.75
1802 1988 3.571571 TGAGTGTTTCCTCGTGTATTCG 58.428 45.455 0.00 0.00 34.04 3.34
1803 1989 3.005050 TGAGTGTTTCCTCGTGTATTCGT 59.995 43.478 0.00 0.00 34.04 3.85
1804 1990 3.572584 AGTGTTTCCTCGTGTATTCGTC 58.427 45.455 0.00 0.00 0.00 4.20
1805 1991 2.340577 GTGTTTCCTCGTGTATTCGTCG 59.659 50.000 0.00 0.00 0.00 5.12
1806 1992 2.030893 TGTTTCCTCGTGTATTCGTCGT 60.031 45.455 0.00 0.00 0.00 4.34
1807 1993 2.251869 TTCCTCGTGTATTCGTCGTG 57.748 50.000 0.00 0.00 0.00 4.35
1808 1994 1.159285 TCCTCGTGTATTCGTCGTGT 58.841 50.000 0.00 0.00 0.00 4.49
1809 1995 1.536766 TCCTCGTGTATTCGTCGTGTT 59.463 47.619 0.00 0.00 0.00 3.32
1810 1996 1.909532 CCTCGTGTATTCGTCGTGTTC 59.090 52.381 0.00 0.00 0.00 3.18
1811 1997 2.413765 CCTCGTGTATTCGTCGTGTTCT 60.414 50.000 0.00 0.00 0.00 3.01
1812 1998 3.231965 CTCGTGTATTCGTCGTGTTCTT 58.768 45.455 0.00 0.00 0.00 2.52
1813 1999 3.228749 TCGTGTATTCGTCGTGTTCTTC 58.771 45.455 0.00 0.00 0.00 2.87
1814 2000 2.024875 CGTGTATTCGTCGTGTTCTTCG 59.975 50.000 0.00 0.00 0.00 3.79
1815 2001 2.975851 GTGTATTCGTCGTGTTCTTCGT 59.024 45.455 0.00 0.00 0.00 3.85
1816 2002 2.975193 TGTATTCGTCGTGTTCTTCGTG 59.025 45.455 0.00 0.00 0.00 4.35
1817 2003 1.415374 ATTCGTCGTGTTCTTCGTGG 58.585 50.000 0.00 0.00 0.00 4.94
1818 2004 0.595567 TTCGTCGTGTTCTTCGTGGG 60.596 55.000 0.00 0.00 0.00 4.61
1819 2005 1.008194 CGTCGTGTTCTTCGTGGGA 60.008 57.895 0.00 0.00 0.00 4.37
1820 2006 0.388134 CGTCGTGTTCTTCGTGGGAT 60.388 55.000 0.00 0.00 0.00 3.85
1821 2007 1.347320 GTCGTGTTCTTCGTGGGATC 58.653 55.000 0.00 0.00 0.00 3.36
1822 2008 0.245539 TCGTGTTCTTCGTGGGATCC 59.754 55.000 1.92 1.92 0.00 3.36
1823 2009 0.739813 CGTGTTCTTCGTGGGATCCC 60.740 60.000 25.22 25.22 0.00 3.85
1824 2010 0.392595 GTGTTCTTCGTGGGATCCCC 60.393 60.000 28.58 17.75 45.71 4.81
1825 2011 0.546747 TGTTCTTCGTGGGATCCCCT 60.547 55.000 28.58 0.00 45.70 4.79
1826 2012 0.178301 GTTCTTCGTGGGATCCCCTC 59.822 60.000 28.58 19.12 45.70 4.30
1827 2013 0.042731 TTCTTCGTGGGATCCCCTCT 59.957 55.000 28.58 0.00 45.70 3.69
1828 2014 0.931468 TCTTCGTGGGATCCCCTCTA 59.069 55.000 28.58 6.36 45.70 2.43
1829 2015 1.503784 TCTTCGTGGGATCCCCTCTAT 59.496 52.381 28.58 0.00 45.70 1.98
1830 2016 2.090719 TCTTCGTGGGATCCCCTCTATT 60.091 50.000 28.58 0.00 45.70 1.73
1831 2017 2.489528 TCGTGGGATCCCCTCTATTT 57.510 50.000 28.58 0.00 45.70 1.40
1832 2018 2.047061 TCGTGGGATCCCCTCTATTTG 58.953 52.381 28.58 8.61 45.70 2.32
1833 2019 1.768870 CGTGGGATCCCCTCTATTTGT 59.231 52.381 28.58 0.00 45.70 2.83
1834 2020 2.485479 CGTGGGATCCCCTCTATTTGTG 60.485 54.545 28.58 3.32 45.70 3.33
1835 2021 2.777692 GTGGGATCCCCTCTATTTGTGA 59.222 50.000 28.58 1.10 45.70 3.58
1836 2022 3.202151 GTGGGATCCCCTCTATTTGTGAA 59.798 47.826 28.58 0.87 45.70 3.18
1837 2023 3.855599 TGGGATCCCCTCTATTTGTGAAA 59.144 43.478 28.58 0.37 45.70 2.69
1838 2024 4.079787 TGGGATCCCCTCTATTTGTGAAAG 60.080 45.833 28.58 0.00 45.70 2.62
1839 2025 4.166144 GGGATCCCCTCTATTTGTGAAAGA 59.834 45.833 21.42 0.00 41.34 2.52
1840 2026 5.163045 GGGATCCCCTCTATTTGTGAAAGAT 60.163 44.000 21.42 0.00 41.34 2.40
1841 2027 6.000840 GGATCCCCTCTATTTGTGAAAGATC 58.999 44.000 0.00 0.00 0.00 2.75
1842 2028 5.023533 TCCCCTCTATTTGTGAAAGATCG 57.976 43.478 0.00 0.00 0.00 3.69
1843 2029 4.130118 CCCCTCTATTTGTGAAAGATCGG 58.870 47.826 0.00 0.00 0.00 4.18
1844 2030 3.561725 CCCTCTATTTGTGAAAGATCGGC 59.438 47.826 0.00 0.00 0.00 5.54
1845 2031 3.561725 CCTCTATTTGTGAAAGATCGGCC 59.438 47.826 0.00 0.00 0.00 6.13
1846 2032 4.446371 CTCTATTTGTGAAAGATCGGCCT 58.554 43.478 0.00 0.00 0.00 5.19
1847 2033 4.843728 TCTATTTGTGAAAGATCGGCCTT 58.156 39.130 0.00 0.00 0.00 4.35
1848 2034 5.984725 TCTATTTGTGAAAGATCGGCCTTA 58.015 37.500 0.00 0.00 0.00 2.69
1849 2035 6.049149 TCTATTTGTGAAAGATCGGCCTTAG 58.951 40.000 0.00 0.00 0.00 2.18
1850 2036 2.691409 TGTGAAAGATCGGCCTTAGG 57.309 50.000 0.00 0.00 0.00 2.69
1851 2037 1.209504 TGTGAAAGATCGGCCTTAGGG 59.790 52.381 0.00 0.00 0.00 3.53
1852 2038 1.209747 GTGAAAGATCGGCCTTAGGGT 59.790 52.381 0.00 0.00 34.45 4.34
1853 2039 1.913419 TGAAAGATCGGCCTTAGGGTT 59.087 47.619 0.00 0.00 34.45 4.11
1854 2040 2.093128 TGAAAGATCGGCCTTAGGGTTC 60.093 50.000 0.00 0.00 34.45 3.62
1855 2041 0.837940 AAGATCGGCCTTAGGGTTCC 59.162 55.000 0.00 0.00 34.45 3.62
1856 2042 0.326238 AGATCGGCCTTAGGGTTCCA 60.326 55.000 0.00 0.00 34.45 3.53
1857 2043 0.179054 GATCGGCCTTAGGGTTCCAC 60.179 60.000 0.00 0.00 34.45 4.02
1858 2044 1.632965 ATCGGCCTTAGGGTTCCACC 61.633 60.000 0.00 0.00 37.60 4.61
1870 2056 3.933861 GGTTCCACCCTACATCATCTT 57.066 47.619 0.00 0.00 30.04 2.40
1871 2057 3.545703 GGTTCCACCCTACATCATCTTG 58.454 50.000 0.00 0.00 30.04 3.02
1872 2058 3.545703 GTTCCACCCTACATCATCTTGG 58.454 50.000 0.00 0.00 0.00 3.61
1873 2059 2.845659 TCCACCCTACATCATCTTGGT 58.154 47.619 0.00 0.00 0.00 3.67
1874 2060 4.002256 TCCACCCTACATCATCTTGGTA 57.998 45.455 0.00 0.00 0.00 3.25
1875 2061 4.566837 TCCACCCTACATCATCTTGGTAT 58.433 43.478 0.00 0.00 0.00 2.73
1876 2062 4.593206 TCCACCCTACATCATCTTGGTATC 59.407 45.833 0.00 0.00 0.00 2.24
1877 2063 4.347876 CCACCCTACATCATCTTGGTATCA 59.652 45.833 0.00 0.00 0.00 2.15
1878 2064 5.512060 CCACCCTACATCATCTTGGTATCAG 60.512 48.000 0.00 0.00 0.00 2.90
1879 2065 5.305386 CACCCTACATCATCTTGGTATCAGA 59.695 44.000 0.00 0.00 0.00 3.27
1880 2066 5.541868 ACCCTACATCATCTTGGTATCAGAG 59.458 44.000 0.00 0.00 0.00 3.35
1881 2067 5.477510 CCTACATCATCTTGGTATCAGAGC 58.522 45.833 0.00 0.00 0.00 4.09
1882 2068 4.348863 ACATCATCTTGGTATCAGAGCC 57.651 45.455 0.00 0.00 0.00 4.70
1883 2069 3.713248 ACATCATCTTGGTATCAGAGCCA 59.287 43.478 0.00 0.00 0.00 4.75
1884 2070 3.827008 TCATCTTGGTATCAGAGCCAC 57.173 47.619 0.00 0.00 34.02 5.01
1885 2071 2.101415 TCATCTTGGTATCAGAGCCACG 59.899 50.000 0.00 0.00 34.02 4.94
1886 2072 0.175760 TCTTGGTATCAGAGCCACGC 59.824 55.000 0.00 0.00 34.02 5.34
1887 2073 0.176680 CTTGGTATCAGAGCCACGCT 59.823 55.000 0.00 0.00 43.88 5.07
1888 2074 0.108186 TTGGTATCAGAGCCACGCTG 60.108 55.000 0.00 0.00 39.88 5.18
1889 2075 0.970427 TGGTATCAGAGCCACGCTGA 60.970 55.000 3.51 3.51 43.61 4.26
1891 2077 1.604185 GGTATCAGAGCCACGCTGATC 60.604 57.143 15.61 8.84 45.15 2.92
1892 2078 1.067669 GTATCAGAGCCACGCTGATCA 59.932 52.381 15.61 0.00 45.15 2.92
1893 2079 0.179089 ATCAGAGCCACGCTGATCAC 60.179 55.000 7.85 0.00 45.15 3.06
1894 2080 2.163390 CAGAGCCACGCTGATCACG 61.163 63.158 13.71 13.71 39.88 4.35
1895 2081 2.181777 GAGCCACGCTGATCACGA 59.818 61.111 19.74 0.00 39.88 4.35
1896 2082 1.446099 GAGCCACGCTGATCACGAA 60.446 57.895 19.74 0.00 39.88 3.85
1897 2083 0.807667 GAGCCACGCTGATCACGAAT 60.808 55.000 19.74 6.57 39.88 3.34
1898 2084 0.391661 AGCCACGCTGATCACGAATT 60.392 50.000 19.74 0.71 37.57 2.17
1899 2085 0.447801 GCCACGCTGATCACGAATTT 59.552 50.000 19.74 0.41 0.00 1.82
1900 2086 1.791555 GCCACGCTGATCACGAATTTG 60.792 52.381 19.74 10.22 0.00 2.32
1901 2087 1.202065 CCACGCTGATCACGAATTTGG 60.202 52.381 19.74 14.03 0.00 3.28
1902 2088 1.086696 ACGCTGATCACGAATTTGGG 58.913 50.000 19.74 7.75 0.00 4.12
1903 2089 0.378257 CGCTGATCACGAATTTGGGG 59.622 55.000 10.86 0.00 0.00 4.96
1904 2090 1.463674 GCTGATCACGAATTTGGGGT 58.536 50.000 0.00 0.00 0.00 4.95
1905 2091 1.818674 GCTGATCACGAATTTGGGGTT 59.181 47.619 0.00 0.00 0.00 4.11
1906 2092 2.231235 GCTGATCACGAATTTGGGGTTT 59.769 45.455 0.00 0.00 0.00 3.27
1907 2093 3.673323 GCTGATCACGAATTTGGGGTTTC 60.673 47.826 0.00 0.00 0.00 2.78
1908 2094 2.823154 TGATCACGAATTTGGGGTTTCC 59.177 45.455 0.00 0.00 0.00 3.13
1921 2107 1.919240 GGTTTCCCCCATCGTTTTCT 58.081 50.000 0.00 0.00 0.00 2.52
1922 2108 3.076079 GGTTTCCCCCATCGTTTTCTA 57.924 47.619 0.00 0.00 0.00 2.10
1923 2109 3.014623 GGTTTCCCCCATCGTTTTCTAG 58.985 50.000 0.00 0.00 0.00 2.43
1924 2110 2.413310 TTCCCCCATCGTTTTCTAGC 57.587 50.000 0.00 0.00 0.00 3.42
1925 2111 0.544697 TCCCCCATCGTTTTCTAGCC 59.455 55.000 0.00 0.00 0.00 3.93
1926 2112 0.546598 CCCCCATCGTTTTCTAGCCT 59.453 55.000 0.00 0.00 0.00 4.58
1927 2113 1.064685 CCCCCATCGTTTTCTAGCCTT 60.065 52.381 0.00 0.00 0.00 4.35
1928 2114 2.017049 CCCCATCGTTTTCTAGCCTTG 58.983 52.381 0.00 0.00 0.00 3.61
1929 2115 2.618045 CCCCATCGTTTTCTAGCCTTGT 60.618 50.000 0.00 0.00 0.00 3.16
1930 2116 3.081804 CCCATCGTTTTCTAGCCTTGTT 58.918 45.455 0.00 0.00 0.00 2.83
1931 2117 3.506067 CCCATCGTTTTCTAGCCTTGTTT 59.494 43.478 0.00 0.00 0.00 2.83
1932 2118 4.022329 CCCATCGTTTTCTAGCCTTGTTTT 60.022 41.667 0.00 0.00 0.00 2.43
1933 2119 4.917415 CCATCGTTTTCTAGCCTTGTTTTG 59.083 41.667 0.00 0.00 0.00 2.44
1934 2120 3.959943 TCGTTTTCTAGCCTTGTTTTGC 58.040 40.909 0.00 0.00 0.00 3.68
1935 2121 3.630312 TCGTTTTCTAGCCTTGTTTTGCT 59.370 39.130 0.00 0.00 41.57 3.91
1936 2122 4.097286 TCGTTTTCTAGCCTTGTTTTGCTT 59.903 37.500 0.00 0.00 39.00 3.91
1937 2123 4.441087 CGTTTTCTAGCCTTGTTTTGCTTC 59.559 41.667 0.00 0.00 39.00 3.86
1938 2124 3.896648 TTCTAGCCTTGTTTTGCTTCG 57.103 42.857 0.00 0.00 39.00 3.79
1939 2125 2.846193 TCTAGCCTTGTTTTGCTTCGT 58.154 42.857 0.00 0.00 39.00 3.85
1940 2126 2.806244 TCTAGCCTTGTTTTGCTTCGTC 59.194 45.455 0.00 0.00 39.00 4.20
1941 2127 0.668535 AGCCTTGTTTTGCTTCGTCC 59.331 50.000 0.00 0.00 32.94 4.79
1942 2128 0.668535 GCCTTGTTTTGCTTCGTCCT 59.331 50.000 0.00 0.00 0.00 3.85
1943 2129 1.877443 GCCTTGTTTTGCTTCGTCCTA 59.123 47.619 0.00 0.00 0.00 2.94
1944 2130 2.292292 GCCTTGTTTTGCTTCGTCCTAA 59.708 45.455 0.00 0.00 0.00 2.69
1945 2131 3.243267 GCCTTGTTTTGCTTCGTCCTAAA 60.243 43.478 0.00 0.00 0.00 1.85
1946 2132 4.558697 GCCTTGTTTTGCTTCGTCCTAAAT 60.559 41.667 0.00 0.00 0.00 1.40
1947 2133 5.528870 CCTTGTTTTGCTTCGTCCTAAATT 58.471 37.500 0.00 0.00 0.00 1.82
1948 2134 5.983118 CCTTGTTTTGCTTCGTCCTAAATTT 59.017 36.000 0.00 0.00 0.00 1.82
1949 2135 6.143919 CCTTGTTTTGCTTCGTCCTAAATTTC 59.856 38.462 0.00 0.00 0.00 2.17
1950 2136 5.209240 TGTTTTGCTTCGTCCTAAATTTCG 58.791 37.500 0.00 0.00 0.00 3.46
1951 2137 5.007823 TGTTTTGCTTCGTCCTAAATTTCGA 59.992 36.000 0.00 0.00 0.00 3.71
1952 2138 5.676532 TTTGCTTCGTCCTAAATTTCGAA 57.323 34.783 10.76 10.76 39.41 3.71
1953 2139 5.676532 TTGCTTCGTCCTAAATTTCGAAA 57.323 34.783 13.91 13.91 40.74 3.46
1954 2140 5.676532 TGCTTCGTCCTAAATTTCGAAAA 57.323 34.783 15.66 0.00 40.74 2.29
1955 2141 6.249035 TGCTTCGTCCTAAATTTCGAAAAT 57.751 33.333 15.66 3.11 40.74 1.82
1956 2142 6.674066 TGCTTCGTCCTAAATTTCGAAAATT 58.326 32.000 15.66 15.34 40.74 1.82
1957 2143 6.799925 TGCTTCGTCCTAAATTTCGAAAATTC 59.200 34.615 15.66 0.10 40.74 2.17
1958 2144 6.250739 GCTTCGTCCTAAATTTCGAAAATTCC 59.749 38.462 15.66 1.81 40.74 3.01
1959 2145 6.185852 TCGTCCTAAATTTCGAAAATTCCC 57.814 37.500 15.66 1.48 0.00 3.97
1960 2146 5.124297 TCGTCCTAAATTTCGAAAATTCCCC 59.876 40.000 15.66 1.81 0.00 4.81
1961 2147 5.106078 CGTCCTAAATTTCGAAAATTCCCCA 60.106 40.000 15.66 0.00 0.00 4.96
1962 2148 6.097356 GTCCTAAATTTCGAAAATTCCCCAC 58.903 40.000 15.66 4.77 0.00 4.61
1963 2149 5.775701 TCCTAAATTTCGAAAATTCCCCACA 59.224 36.000 15.66 0.00 0.00 4.17
1964 2150 6.267928 TCCTAAATTTCGAAAATTCCCCACAA 59.732 34.615 15.66 0.00 0.00 3.33
1965 2151 6.931840 CCTAAATTTCGAAAATTCCCCACAAA 59.068 34.615 15.66 0.00 0.00 2.83
1966 2152 7.442666 CCTAAATTTCGAAAATTCCCCACAAAA 59.557 33.333 15.66 0.00 0.00 2.44
1967 2153 7.631717 AAATTTCGAAAATTCCCCACAAAAA 57.368 28.000 15.66 0.00 0.00 1.94
1968 2154 7.815840 AATTTCGAAAATTCCCCACAAAAAT 57.184 28.000 15.66 0.00 0.00 1.82
1969 2155 8.910351 AATTTCGAAAATTCCCCACAAAAATA 57.090 26.923 15.66 0.00 0.00 1.40
1970 2156 7.954788 TTTCGAAAATTCCCCACAAAAATAG 57.045 32.000 8.44 0.00 0.00 1.73
1971 2157 6.902771 TCGAAAATTCCCCACAAAAATAGA 57.097 33.333 0.00 0.00 0.00 1.98
1972 2158 6.683715 TCGAAAATTCCCCACAAAAATAGAC 58.316 36.000 0.00 0.00 0.00 2.59
1973 2159 5.867174 CGAAAATTCCCCACAAAAATAGACC 59.133 40.000 0.00 0.00 0.00 3.85
1974 2160 5.755409 AAATTCCCCACAAAAATAGACCC 57.245 39.130 0.00 0.00 0.00 4.46
1975 2161 3.905493 TTCCCCACAAAAATAGACCCA 57.095 42.857 0.00 0.00 0.00 4.51
1976 2162 3.905493 TCCCCACAAAAATAGACCCAA 57.095 42.857 0.00 0.00 0.00 4.12
1977 2163 4.412060 TCCCCACAAAAATAGACCCAAT 57.588 40.909 0.00 0.00 0.00 3.16
1978 2164 4.757692 TCCCCACAAAAATAGACCCAATT 58.242 39.130 0.00 0.00 0.00 2.32
1979 2165 5.158889 TCCCCACAAAAATAGACCCAATTT 58.841 37.500 0.00 0.00 0.00 1.82
1980 2166 5.608860 TCCCCACAAAAATAGACCCAATTTT 59.391 36.000 0.00 0.00 37.98 1.82
1981 2167 6.101881 TCCCCACAAAAATAGACCCAATTTTT 59.898 34.615 1.70 1.70 43.72 1.94
2003 2189 7.912056 TTTTTGTGATTTGTTGGTTTGATGA 57.088 28.000 0.00 0.00 0.00 2.92
2004 2190 8.503458 TTTTTGTGATTTGTTGGTTTGATGAT 57.497 26.923 0.00 0.00 0.00 2.45
2005 2191 7.479897 TTTGTGATTTGTTGGTTTGATGATG 57.520 32.000 0.00 0.00 0.00 3.07
2006 2192 6.159299 TGTGATTTGTTGGTTTGATGATGT 57.841 33.333 0.00 0.00 0.00 3.06
2007 2193 6.580788 TGTGATTTGTTGGTTTGATGATGTT 58.419 32.000 0.00 0.00 0.00 2.71
2008 2194 7.046652 TGTGATTTGTTGGTTTGATGATGTTT 58.953 30.769 0.00 0.00 0.00 2.83
2009 2195 7.551974 TGTGATTTGTTGGTTTGATGATGTTTT 59.448 29.630 0.00 0.00 0.00 2.43
2010 2196 7.851963 GTGATTTGTTGGTTTGATGATGTTTTG 59.148 33.333 0.00 0.00 0.00 2.44
2011 2197 7.551974 TGATTTGTTGGTTTGATGATGTTTTGT 59.448 29.630 0.00 0.00 0.00 2.83
2012 2198 7.678947 TTTGTTGGTTTGATGATGTTTTGTT 57.321 28.000 0.00 0.00 0.00 2.83
2013 2199 6.659361 TGTTGGTTTGATGATGTTTTGTTG 57.341 33.333 0.00 0.00 0.00 3.33
2014 2200 6.401394 TGTTGGTTTGATGATGTTTTGTTGA 58.599 32.000 0.00 0.00 0.00 3.18
2015 2201 7.046652 TGTTGGTTTGATGATGTTTTGTTGAT 58.953 30.769 0.00 0.00 0.00 2.57
2016 2202 7.551974 TGTTGGTTTGATGATGTTTTGTTGATT 59.448 29.630 0.00 0.00 0.00 2.57
2017 2203 8.397148 GTTGGTTTGATGATGTTTTGTTGATTT 58.603 29.630 0.00 0.00 0.00 2.17
2018 2204 8.503458 TGGTTTGATGATGTTTTGTTGATTTT 57.497 26.923 0.00 0.00 0.00 1.82
2019 2205 8.396390 TGGTTTGATGATGTTTTGTTGATTTTG 58.604 29.630 0.00 0.00 0.00 2.44
2020 2206 8.610896 GGTTTGATGATGTTTTGTTGATTTTGA 58.389 29.630 0.00 0.00 0.00 2.69
2023 2209 8.890124 TGATGATGTTTTGTTGATTTTGATGT 57.110 26.923 0.00 0.00 0.00 3.06
2024 2210 9.978044 TGATGATGTTTTGTTGATTTTGATGTA 57.022 25.926 0.00 0.00 0.00 2.29
2027 2213 9.205719 TGATGTTTTGTTGATTTTGATGTATGG 57.794 29.630 0.00 0.00 0.00 2.74
2028 2214 9.421806 GATGTTTTGTTGATTTTGATGTATGGA 57.578 29.630 0.00 0.00 0.00 3.41
2029 2215 9.947433 ATGTTTTGTTGATTTTGATGTATGGAT 57.053 25.926 0.00 0.00 0.00 3.41
2030 2216 9.775854 TGTTTTGTTGATTTTGATGTATGGATT 57.224 25.926 0.00 0.00 0.00 3.01
2033 2219 9.585099 TTTGTTGATTTTGATGTATGGATTAGC 57.415 29.630 0.00 0.00 0.00 3.09
2034 2220 8.523915 TGTTGATTTTGATGTATGGATTAGCT 57.476 30.769 0.00 0.00 0.00 3.32
2035 2221 8.407832 TGTTGATTTTGATGTATGGATTAGCTG 58.592 33.333 0.00 0.00 0.00 4.24
2036 2222 8.408601 GTTGATTTTGATGTATGGATTAGCTGT 58.591 33.333 0.00 0.00 0.00 4.40
2037 2223 7.933396 TGATTTTGATGTATGGATTAGCTGTG 58.067 34.615 0.00 0.00 0.00 3.66
2038 2224 7.557358 TGATTTTGATGTATGGATTAGCTGTGT 59.443 33.333 0.00 0.00 0.00 3.72
2039 2225 7.701539 TTTTGATGTATGGATTAGCTGTGTT 57.298 32.000 0.00 0.00 0.00 3.32
2040 2226 6.682423 TTGATGTATGGATTAGCTGTGTTG 57.318 37.500 0.00 0.00 0.00 3.33
2041 2227 4.576053 TGATGTATGGATTAGCTGTGTTGC 59.424 41.667 0.00 0.00 0.00 4.17
2042 2228 3.949132 TGTATGGATTAGCTGTGTTGCA 58.051 40.909 0.00 0.00 34.99 4.08
2043 2229 4.331108 TGTATGGATTAGCTGTGTTGCAA 58.669 39.130 0.00 0.00 34.99 4.08
2044 2230 4.395854 TGTATGGATTAGCTGTGTTGCAAG 59.604 41.667 0.00 0.00 34.99 4.01
2045 2231 2.862541 TGGATTAGCTGTGTTGCAAGT 58.137 42.857 0.00 0.00 34.99 3.16
2046 2232 2.553602 TGGATTAGCTGTGTTGCAAGTG 59.446 45.455 0.00 0.00 34.99 3.16
2047 2233 2.095059 GGATTAGCTGTGTTGCAAGTGG 60.095 50.000 0.00 0.00 34.99 4.00
2048 2234 2.340210 TTAGCTGTGTTGCAAGTGGA 57.660 45.000 0.00 0.00 34.99 4.02
2049 2235 2.566833 TAGCTGTGTTGCAAGTGGAT 57.433 45.000 0.00 0.00 34.99 3.41
2050 2236 1.242076 AGCTGTGTTGCAAGTGGATC 58.758 50.000 0.00 0.00 34.99 3.36
2051 2237 1.202855 AGCTGTGTTGCAAGTGGATCT 60.203 47.619 0.00 0.00 34.99 2.75
2052 2238 2.038952 AGCTGTGTTGCAAGTGGATCTA 59.961 45.455 0.00 0.00 34.99 1.98
2053 2239 2.813754 GCTGTGTTGCAAGTGGATCTAA 59.186 45.455 0.00 0.00 0.00 2.10
2054 2240 3.365364 GCTGTGTTGCAAGTGGATCTAAC 60.365 47.826 0.00 0.00 0.00 2.34
2055 2241 3.146066 TGTGTTGCAAGTGGATCTAACC 58.854 45.455 0.00 0.00 0.00 2.85
2056 2242 3.181445 TGTGTTGCAAGTGGATCTAACCT 60.181 43.478 0.00 0.00 0.00 3.50
2057 2243 3.821033 GTGTTGCAAGTGGATCTAACCTT 59.179 43.478 0.00 0.00 0.00 3.50
2058 2244 4.278419 GTGTTGCAAGTGGATCTAACCTTT 59.722 41.667 0.00 0.00 0.00 3.11
2059 2245 4.518970 TGTTGCAAGTGGATCTAACCTTTC 59.481 41.667 0.00 0.00 0.00 2.62
2060 2246 3.686016 TGCAAGTGGATCTAACCTTTCC 58.314 45.455 0.00 0.00 0.00 3.13
2061 2247 3.017442 GCAAGTGGATCTAACCTTTCCC 58.983 50.000 0.00 0.00 0.00 3.97
2062 2248 3.621558 CAAGTGGATCTAACCTTTCCCC 58.378 50.000 0.00 0.00 0.00 4.81
2063 2249 2.929301 AGTGGATCTAACCTTTCCCCA 58.071 47.619 0.00 0.00 0.00 4.96
2064 2250 2.576648 AGTGGATCTAACCTTTCCCCAC 59.423 50.000 0.00 0.00 41.95 4.61
2065 2251 1.920351 TGGATCTAACCTTTCCCCACC 59.080 52.381 0.00 0.00 0.00 4.61
2066 2252 1.920351 GGATCTAACCTTTCCCCACCA 59.080 52.381 0.00 0.00 0.00 4.17
2067 2253 2.514160 GGATCTAACCTTTCCCCACCAT 59.486 50.000 0.00 0.00 0.00 3.55
2068 2254 3.435169 GGATCTAACCTTTCCCCACCATC 60.435 52.174 0.00 0.00 0.00 3.51
2069 2255 2.929301 TCTAACCTTTCCCCACCATCT 58.071 47.619 0.00 0.00 0.00 2.90
2070 2256 2.844348 TCTAACCTTTCCCCACCATCTC 59.156 50.000 0.00 0.00 0.00 2.75
2071 2257 0.704664 AACCTTTCCCCACCATCTCC 59.295 55.000 0.00 0.00 0.00 3.71
2072 2258 0.477597 ACCTTTCCCCACCATCTCCA 60.478 55.000 0.00 0.00 0.00 3.86
2073 2259 0.034089 CCTTTCCCCACCATCTCCAC 60.034 60.000 0.00 0.00 0.00 4.02
2074 2260 0.034089 CTTTCCCCACCATCTCCACC 60.034 60.000 0.00 0.00 0.00 4.61
2075 2261 1.847798 TTTCCCCACCATCTCCACCG 61.848 60.000 0.00 0.00 0.00 4.94
2076 2262 4.489771 CCCCACCATCTCCACCGC 62.490 72.222 0.00 0.00 0.00 5.68
2077 2263 4.838152 CCCACCATCTCCACCGCG 62.838 72.222 0.00 0.00 0.00 6.46
2078 2264 3.770040 CCACCATCTCCACCGCGA 61.770 66.667 8.23 0.00 0.00 5.87
2079 2265 2.264480 CACCATCTCCACCGCGAA 59.736 61.111 8.23 0.00 0.00 4.70
2080 2266 1.375396 CACCATCTCCACCGCGAAA 60.375 57.895 8.23 0.00 0.00 3.46
2081 2267 0.744414 CACCATCTCCACCGCGAAAT 60.744 55.000 8.23 0.00 0.00 2.17
2082 2268 0.462047 ACCATCTCCACCGCGAAATC 60.462 55.000 8.23 0.00 0.00 2.17
2083 2269 1.160329 CCATCTCCACCGCGAAATCC 61.160 60.000 8.23 0.00 0.00 3.01
2084 2270 0.461870 CATCTCCACCGCGAAATCCA 60.462 55.000 8.23 0.00 0.00 3.41
2085 2271 0.469917 ATCTCCACCGCGAAATCCAT 59.530 50.000 8.23 0.00 0.00 3.41
2086 2272 1.116308 TCTCCACCGCGAAATCCATA 58.884 50.000 8.23 0.00 0.00 2.74
2087 2273 1.483004 TCTCCACCGCGAAATCCATAA 59.517 47.619 8.23 0.00 0.00 1.90
2088 2274 2.093394 TCTCCACCGCGAAATCCATAAA 60.093 45.455 8.23 0.00 0.00 1.40
2089 2275 2.680841 CTCCACCGCGAAATCCATAAAA 59.319 45.455 8.23 0.00 0.00 1.52
2090 2276 3.082548 TCCACCGCGAAATCCATAAAAA 58.917 40.909 8.23 0.00 0.00 1.94
2119 2305 4.518249 GAAATCCTCGAATTTCTCCCTGT 58.482 43.478 13.09 0.00 40.77 4.00
2120 2306 4.576330 AATCCTCGAATTTCTCCCTGTT 57.424 40.909 0.00 0.00 0.00 3.16
2121 2307 4.576330 ATCCTCGAATTTCTCCCTGTTT 57.424 40.909 0.00 0.00 0.00 2.83
2122 2308 4.367039 TCCTCGAATTTCTCCCTGTTTT 57.633 40.909 0.00 0.00 0.00 2.43
2123 2309 4.324267 TCCTCGAATTTCTCCCTGTTTTC 58.676 43.478 0.00 0.00 0.00 2.29
2124 2310 3.125316 CCTCGAATTTCTCCCTGTTTTCG 59.875 47.826 0.00 0.00 37.79 3.46
2125 2311 3.994392 CTCGAATTTCTCCCTGTTTTCGA 59.006 43.478 5.59 5.59 41.60 3.71
2126 2312 3.994392 TCGAATTTCTCCCTGTTTTCGAG 59.006 43.478 1.84 0.00 39.73 4.04
2127 2313 3.746492 CGAATTTCTCCCTGTTTTCGAGT 59.254 43.478 0.00 0.00 38.49 4.18
2128 2314 4.213482 CGAATTTCTCCCTGTTTTCGAGTT 59.787 41.667 0.00 0.00 38.49 3.01
2129 2315 5.614887 CGAATTTCTCCCTGTTTTCGAGTTC 60.615 44.000 0.00 0.00 38.49 3.01
2130 2316 3.830744 TTCTCCCTGTTTTCGAGTTCA 57.169 42.857 0.00 0.00 0.00 3.18
2131 2317 4.351874 TTCTCCCTGTTTTCGAGTTCAT 57.648 40.909 0.00 0.00 0.00 2.57
2132 2318 3.926616 TCTCCCTGTTTTCGAGTTCATC 58.073 45.455 0.00 0.00 0.00 2.92
2133 2319 3.003480 CTCCCTGTTTTCGAGTTCATCC 58.997 50.000 0.00 0.00 0.00 3.51
2134 2320 2.084546 CCCTGTTTTCGAGTTCATCCC 58.915 52.381 0.00 0.00 0.00 3.85
2135 2321 1.732259 CCTGTTTTCGAGTTCATCCCG 59.268 52.381 0.00 0.00 0.00 5.14
2136 2322 2.611971 CCTGTTTTCGAGTTCATCCCGA 60.612 50.000 0.00 0.00 0.00 5.14
2137 2323 2.668457 CTGTTTTCGAGTTCATCCCGAG 59.332 50.000 0.00 0.00 33.66 4.63
2138 2324 1.393883 GTTTTCGAGTTCATCCCGAGC 59.606 52.381 0.00 0.00 33.66 5.03
2139 2325 0.108329 TTTCGAGTTCATCCCGAGCC 60.108 55.000 0.00 0.00 33.66 4.70
2140 2326 0.970937 TTCGAGTTCATCCCGAGCCT 60.971 55.000 0.00 0.00 33.66 4.58
2141 2327 1.066587 CGAGTTCATCCCGAGCCTC 59.933 63.158 0.00 0.00 0.00 4.70
2142 2328 1.667154 CGAGTTCATCCCGAGCCTCA 61.667 60.000 0.00 0.00 0.00 3.86
2143 2329 0.179097 GAGTTCATCCCGAGCCTCAC 60.179 60.000 0.00 0.00 0.00 3.51
2144 2330 1.153349 GTTCATCCCGAGCCTCACC 60.153 63.158 0.00 0.00 0.00 4.02
2145 2331 2.367202 TTCATCCCGAGCCTCACCC 61.367 63.158 0.00 0.00 0.00 4.61
2146 2332 4.227134 CATCCCGAGCCTCACCCG 62.227 72.222 0.00 0.00 0.00 5.28
2155 2341 2.978010 CCTCACCCGCGCAAAGTT 60.978 61.111 8.75 0.00 0.00 2.66
2156 2342 2.252260 CTCACCCGCGCAAAGTTG 59.748 61.111 8.75 0.00 0.00 3.16
2157 2343 2.203084 TCACCCGCGCAAAGTTGA 60.203 55.556 8.75 0.00 0.00 3.18
2158 2344 2.051345 CACCCGCGCAAAGTTGAC 60.051 61.111 8.75 0.00 0.00 3.18
2159 2345 3.284449 ACCCGCGCAAAGTTGACC 61.284 61.111 8.75 0.00 0.00 4.02
2160 2346 2.978010 CCCGCGCAAAGTTGACCT 60.978 61.111 8.75 0.00 0.00 3.85
2161 2347 2.252260 CCGCGCAAAGTTGACCTG 59.748 61.111 8.75 0.00 0.00 4.00
2162 2348 2.427410 CGCGCAAAGTTGACCTGC 60.427 61.111 8.75 0.00 0.00 4.85
2163 2349 2.050077 GCGCAAAGTTGACCTGCC 60.050 61.111 0.30 0.00 32.27 4.85
2164 2350 2.555547 GCGCAAAGTTGACCTGCCT 61.556 57.895 0.30 0.00 32.27 4.75
2165 2351 1.283793 CGCAAAGTTGACCTGCCTG 59.716 57.895 0.00 0.00 32.27 4.85
2166 2352 1.662044 GCAAAGTTGACCTGCCTGG 59.338 57.895 0.00 0.00 42.93 4.45
2167 2353 0.823356 GCAAAGTTGACCTGCCTGGA 60.823 55.000 0.00 0.00 39.71 3.86
2168 2354 1.242076 CAAAGTTGACCTGCCTGGAG 58.758 55.000 0.00 0.00 39.71 3.86
2169 2355 0.538287 AAAGTTGACCTGCCTGGAGC 60.538 55.000 0.00 0.00 44.14 4.70
2184 2370 1.446366 GAGCATCCGGACCCTAACC 59.554 63.158 6.12 0.00 0.00 2.85
2185 2371 2.041206 GAGCATCCGGACCCTAACCC 62.041 65.000 6.12 0.00 0.00 4.11
2186 2372 2.819550 CATCCGGACCCTAACCCG 59.180 66.667 6.12 0.00 44.94 5.28
2190 2376 3.135814 CGGACCCTAACCCGGATC 58.864 66.667 0.73 0.00 41.89 3.36
2191 2377 1.759299 CGGACCCTAACCCGGATCA 60.759 63.158 0.73 0.00 41.89 2.92
2192 2378 1.119574 CGGACCCTAACCCGGATCAT 61.120 60.000 0.73 0.00 41.89 2.45
2193 2379 0.685660 GGACCCTAACCCGGATCATC 59.314 60.000 0.73 0.00 0.00 2.92
2194 2380 0.685660 GACCCTAACCCGGATCATCC 59.314 60.000 0.73 0.00 0.00 3.51
2195 2381 0.767060 ACCCTAACCCGGATCATCCC 60.767 60.000 0.73 0.00 31.13 3.85
2202 2388 4.284860 CGGATCATCCCGCGCAGA 62.285 66.667 8.75 3.34 43.25 4.26
2203 2389 2.356793 GGATCATCCCGCGCAGAG 60.357 66.667 8.75 0.00 0.00 3.35
2204 2390 2.419198 GATCATCCCGCGCAGAGT 59.581 61.111 8.75 0.00 0.00 3.24
2205 2391 1.227380 GATCATCCCGCGCAGAGTT 60.227 57.895 8.75 0.00 0.00 3.01
2206 2392 1.493950 GATCATCCCGCGCAGAGTTG 61.494 60.000 8.75 0.00 0.00 3.16
2207 2393 2.244117 ATCATCCCGCGCAGAGTTGT 62.244 55.000 8.75 0.00 0.00 3.32
2208 2394 2.034879 CATCCCGCGCAGAGTTGTT 61.035 57.895 8.75 0.00 0.00 2.83
2209 2395 1.741770 ATCCCGCGCAGAGTTGTTC 60.742 57.895 8.75 0.00 0.00 3.18
2210 2396 3.423154 CCCGCGCAGAGTTGTTCC 61.423 66.667 8.75 0.00 0.00 3.62
2223 2409 4.763793 AGAGTTGTTCCAAGTGGATGAATG 59.236 41.667 0.00 0.00 44.98 2.67
2281 2467 2.025699 TGGCTTCCCTTAATTAACCGCT 60.026 45.455 0.00 0.00 0.00 5.52
2282 2468 2.357952 GGCTTCCCTTAATTAACCGCTG 59.642 50.000 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.109612 CTACAGGAGGCGTCGGACG 62.110 68.421 25.18 25.18 45.88 4.79
16 17 4.208686 GGCTACAGGAGGCGTCGG 62.209 72.222 0.00 0.00 41.55 4.79
301 304 2.184322 CTAGCACCGGCATCACGT 59.816 61.111 0.00 0.00 44.61 4.49
316 319 0.743701 GAGACACTCCGCCTCGTCTA 60.744 60.000 0.00 0.00 38.80 2.59
317 320 2.034376 AGACACTCCGCCTCGTCT 59.966 61.111 0.00 0.00 33.93 4.18
325 328 1.210413 CACTGGACGAGACACTCCG 59.790 63.158 0.00 0.00 0.00 4.63
336 339 0.179145 CGACGGTACATCCACTGGAC 60.179 60.000 0.00 0.00 38.06 4.02
345 348 1.474077 GGTAAGTGACCGACGGTACAT 59.526 52.381 21.79 13.38 38.87 2.29
414 418 4.910956 CTCAATGTCGAGCCGGAA 57.089 55.556 5.05 0.00 0.00 4.30
424 428 1.679944 CCCACTCGGATTGCTCAATGT 60.680 52.381 0.00 0.00 0.00 2.71
464 499 2.035421 CTTGCACTTCAGCTTGGCA 58.965 52.632 0.00 0.00 34.99 4.92
473 508 1.081840 GCGGTCTTGCTTGCACTTC 60.082 57.895 0.00 0.00 0.00 3.01
526 561 2.808543 ACTGTTTCCTTGAAGATCGTGC 59.191 45.455 0.00 0.00 0.00 5.34
529 564 7.414436 TGTTTTTACTGTTTCCTTGAAGATCG 58.586 34.615 0.00 0.00 0.00 3.69
530 565 9.237846 CTTGTTTTTACTGTTTCCTTGAAGATC 57.762 33.333 0.00 0.00 0.00 2.75
531 566 7.706607 GCTTGTTTTTACTGTTTCCTTGAAGAT 59.293 33.333 0.00 0.00 0.00 2.40
532 567 7.033185 GCTTGTTTTTACTGTTTCCTTGAAGA 58.967 34.615 0.00 0.00 0.00 2.87
533 568 6.811170 TGCTTGTTTTTACTGTTTCCTTGAAG 59.189 34.615 0.00 0.00 0.00 3.02
534 569 6.588373 GTGCTTGTTTTTACTGTTTCCTTGAA 59.412 34.615 0.00 0.00 0.00 2.69
535 570 6.096695 GTGCTTGTTTTTACTGTTTCCTTGA 58.903 36.000 0.00 0.00 0.00 3.02
536 571 5.866633 TGTGCTTGTTTTTACTGTTTCCTTG 59.133 36.000 0.00 0.00 0.00 3.61
537 572 6.031751 TGTGCTTGTTTTTACTGTTTCCTT 57.968 33.333 0.00 0.00 0.00 3.36
538 573 5.652994 TGTGCTTGTTTTTACTGTTTCCT 57.347 34.783 0.00 0.00 0.00 3.36
539 574 6.096695 TCTTGTGCTTGTTTTTACTGTTTCC 58.903 36.000 0.00 0.00 0.00 3.13
540 575 7.027161 TCTCTTGTGCTTGTTTTTACTGTTTC 58.973 34.615 0.00 0.00 0.00 2.78
541 576 6.919721 TCTCTTGTGCTTGTTTTTACTGTTT 58.080 32.000 0.00 0.00 0.00 2.83
542 577 6.509418 TCTCTTGTGCTTGTTTTTACTGTT 57.491 33.333 0.00 0.00 0.00 3.16
543 578 6.509418 TTCTCTTGTGCTTGTTTTTACTGT 57.491 33.333 0.00 0.00 0.00 3.55
544 579 7.754924 TCTTTTCTCTTGTGCTTGTTTTTACTG 59.245 33.333 0.00 0.00 0.00 2.74
545 580 7.826690 TCTTTTCTCTTGTGCTTGTTTTTACT 58.173 30.769 0.00 0.00 0.00 2.24
546 581 8.460831 TTCTTTTCTCTTGTGCTTGTTTTTAC 57.539 30.769 0.00 0.00 0.00 2.01
547 582 9.651913 ATTTCTTTTCTCTTGTGCTTGTTTTTA 57.348 25.926 0.00 0.00 0.00 1.52
548 583 7.961325 TTTCTTTTCTCTTGTGCTTGTTTTT 57.039 28.000 0.00 0.00 0.00 1.94
549 584 7.064966 CCATTTCTTTTCTCTTGTGCTTGTTTT 59.935 33.333 0.00 0.00 0.00 2.43
550 585 6.536224 CCATTTCTTTTCTCTTGTGCTTGTTT 59.464 34.615 0.00 0.00 0.00 2.83
551 586 6.044682 CCATTTCTTTTCTCTTGTGCTTGTT 58.955 36.000 0.00 0.00 0.00 2.83
552 587 5.127682 ACCATTTCTTTTCTCTTGTGCTTGT 59.872 36.000 0.00 0.00 0.00 3.16
553 588 5.594926 ACCATTTCTTTTCTCTTGTGCTTG 58.405 37.500 0.00 0.00 0.00 4.01
554 589 5.859205 ACCATTTCTTTTCTCTTGTGCTT 57.141 34.783 0.00 0.00 0.00 3.91
555 590 6.959639 TTACCATTTCTTTTCTCTTGTGCT 57.040 33.333 0.00 0.00 0.00 4.40
556 591 8.593492 AATTTACCATTTCTTTTCTCTTGTGC 57.407 30.769 0.00 0.00 0.00 4.57
566 601 9.423061 GCAGTATGACAAATTTACCATTTCTTT 57.577 29.630 9.01 0.00 39.69 2.52
567 602 7.754924 CGCAGTATGACAAATTTACCATTTCTT 59.245 33.333 9.01 0.00 39.69 2.52
568 603 7.250569 CGCAGTATGACAAATTTACCATTTCT 58.749 34.615 9.01 6.65 39.69 2.52
569 604 6.472163 CCGCAGTATGACAAATTTACCATTTC 59.528 38.462 9.01 5.08 39.69 2.17
570 605 6.071616 ACCGCAGTATGACAAATTTACCATTT 60.072 34.615 9.01 0.00 39.69 2.32
571 606 5.417580 ACCGCAGTATGACAAATTTACCATT 59.582 36.000 9.01 0.00 39.69 3.16
572 607 4.947388 ACCGCAGTATGACAAATTTACCAT 59.053 37.500 8.81 8.81 39.69 3.55
573 608 4.155099 CACCGCAGTATGACAAATTTACCA 59.845 41.667 0.00 0.00 39.69 3.25
574 609 4.155280 ACACCGCAGTATGACAAATTTACC 59.845 41.667 0.00 0.00 39.69 2.85
575 610 5.291293 ACACCGCAGTATGACAAATTTAC 57.709 39.130 0.00 0.00 39.69 2.01
576 611 6.874664 TCTTACACCGCAGTATGACAAATTTA 59.125 34.615 0.00 0.00 39.69 1.40
577 612 5.703592 TCTTACACCGCAGTATGACAAATTT 59.296 36.000 0.00 0.00 39.69 1.82
578 613 5.242434 TCTTACACCGCAGTATGACAAATT 58.758 37.500 0.00 0.00 39.69 1.82
592 627 5.862924 AGAACATGACAAATCTTACACCG 57.137 39.130 0.00 0.00 0.00 4.94
644 679 8.339714 CAGCATGACAATTGTTTTGAATCTTTT 58.660 29.630 13.36 0.00 39.69 2.27
645 680 7.496591 ACAGCATGACAATTGTTTTGAATCTTT 59.503 29.630 13.36 0.00 39.69 2.52
646 681 6.987992 ACAGCATGACAATTGTTTTGAATCTT 59.012 30.769 13.36 0.00 39.69 2.40
647 682 6.518493 ACAGCATGACAATTGTTTTGAATCT 58.482 32.000 13.36 4.02 39.69 2.40
648 683 6.774354 ACAGCATGACAATTGTTTTGAATC 57.226 33.333 13.36 0.00 39.69 2.52
649 684 7.096106 CGTTACAGCATGACAATTGTTTTGAAT 60.096 33.333 13.36 3.79 39.69 2.57
650 685 6.198029 CGTTACAGCATGACAATTGTTTTGAA 59.802 34.615 13.36 1.82 39.69 2.69
684 719 3.990469 GAGTCAGATGTATAATGGCGTGG 59.010 47.826 0.00 0.00 0.00 4.94
705 740 4.261698 CGTACACCCCAATATACATCACGA 60.262 45.833 0.00 0.00 0.00 4.35
707 742 3.744426 GCGTACACCCCAATATACATCAC 59.256 47.826 0.00 0.00 0.00 3.06
720 755 4.509737 GCGAGGGAGCGTACACCC 62.510 72.222 10.62 10.62 46.57 4.61
727 762 4.933064 GTCATCGGCGAGGGAGCG 62.933 72.222 22.09 2.47 38.18 5.03
908 977 4.021280 TGATCGACGTCTCTAGCTATAGGT 60.021 45.833 14.70 9.78 0.00 3.08
913 982 4.554919 GCAATTGATCGACGTCTCTAGCTA 60.555 45.833 14.70 0.00 0.00 3.32
914 983 3.793801 GCAATTGATCGACGTCTCTAGCT 60.794 47.826 14.70 0.00 0.00 3.32
924 993 3.544834 CGACCTGATTGCAATTGATCGAC 60.545 47.826 19.19 5.03 0.00 4.20
1066 1147 0.389037 CTGTAGCTTGCTGTGCTCGA 60.389 55.000 5.26 0.00 41.46 4.04
1216 1300 3.813596 CACGGGGCTTATGTGCTC 58.186 61.111 0.00 0.00 0.00 4.26
1257 1341 0.533308 ACACCGTGTACGCAACCAAT 60.533 50.000 1.18 0.00 38.18 3.16
1467 1633 6.365247 CCTAATTACGTCCTCACATTATTCCG 59.635 42.308 0.00 0.00 0.00 4.30
1480 1646 2.941064 GGTTTCCTGCCTAATTACGTCC 59.059 50.000 0.00 0.00 0.00 4.79
1689 1872 6.588373 GGGCTTTTTCGCAGAAATTTACATTA 59.412 34.615 4.91 0.00 45.90 1.90
1706 1889 4.401202 CACCTGAATAATACGGGGCTTTTT 59.599 41.667 0.00 0.00 38.04 1.94
1711 1894 2.632987 ACACCTGAATAATACGGGGC 57.367 50.000 0.00 0.00 38.04 5.80
1715 1898 5.064707 CCACTTGGAACACCTGAATAATACG 59.935 44.000 0.00 0.00 39.29 3.06
1746 1932 1.410004 TCACACGAGGTTCCAAGAGT 58.590 50.000 0.00 0.00 0.00 3.24
1753 1939 2.408704 CGAGAACAATCACACGAGGTTC 59.591 50.000 0.00 0.00 38.62 3.62
1754 1940 2.223971 ACGAGAACAATCACACGAGGTT 60.224 45.455 0.00 0.00 0.00 3.50
1755 1941 1.340248 ACGAGAACAATCACACGAGGT 59.660 47.619 0.00 0.00 0.00 3.85
1756 1942 2.065993 ACGAGAACAATCACACGAGG 57.934 50.000 0.00 0.00 0.00 4.63
1757 1943 3.049912 TCAACGAGAACAATCACACGAG 58.950 45.455 0.00 0.00 0.00 4.18
1758 1944 3.086818 TCAACGAGAACAATCACACGA 57.913 42.857 0.00 0.00 0.00 4.35
1759 1945 4.389664 AATCAACGAGAACAATCACACG 57.610 40.909 0.00 0.00 0.00 4.49
1760 1946 5.747565 TCAAATCAACGAGAACAATCACAC 58.252 37.500 0.00 0.00 0.00 3.82
1761 1947 5.527214 ACTCAAATCAACGAGAACAATCACA 59.473 36.000 0.00 0.00 33.33 3.58
1762 1948 5.848036 CACTCAAATCAACGAGAACAATCAC 59.152 40.000 0.00 0.00 33.33 3.06
1763 1949 5.527214 ACACTCAAATCAACGAGAACAATCA 59.473 36.000 0.00 0.00 33.33 2.57
1764 1950 5.990408 ACACTCAAATCAACGAGAACAATC 58.010 37.500 0.00 0.00 33.33 2.67
1765 1951 6.377327 AACACTCAAATCAACGAGAACAAT 57.623 33.333 0.00 0.00 33.33 2.71
1766 1952 5.811399 AACACTCAAATCAACGAGAACAA 57.189 34.783 0.00 0.00 33.33 2.83
1767 1953 5.220777 GGAAACACTCAAATCAACGAGAACA 60.221 40.000 0.00 0.00 33.33 3.18
1768 1954 5.007724 AGGAAACACTCAAATCAACGAGAAC 59.992 40.000 0.00 0.00 33.33 3.01
1769 1955 5.123227 AGGAAACACTCAAATCAACGAGAA 58.877 37.500 0.00 0.00 33.33 2.87
1770 1956 4.703897 AGGAAACACTCAAATCAACGAGA 58.296 39.130 0.00 0.00 33.33 4.04
1771 1957 4.376413 CGAGGAAACACTCAAATCAACGAG 60.376 45.833 0.00 0.00 37.34 4.18
1772 1958 3.493129 CGAGGAAACACTCAAATCAACGA 59.507 43.478 0.00 0.00 37.34 3.85
1773 1959 3.247648 ACGAGGAAACACTCAAATCAACG 59.752 43.478 0.00 0.00 37.34 4.10
1774 1960 4.035208 ACACGAGGAAACACTCAAATCAAC 59.965 41.667 0.00 0.00 37.34 3.18
1775 1961 4.196193 ACACGAGGAAACACTCAAATCAA 58.804 39.130 0.00 0.00 37.34 2.57
1776 1962 3.804036 ACACGAGGAAACACTCAAATCA 58.196 40.909 0.00 0.00 37.34 2.57
1777 1963 6.481954 AATACACGAGGAAACACTCAAATC 57.518 37.500 0.00 0.00 37.34 2.17
1778 1964 5.120208 CGAATACACGAGGAAACACTCAAAT 59.880 40.000 0.00 0.00 37.34 2.32
1779 1965 4.446385 CGAATACACGAGGAAACACTCAAA 59.554 41.667 0.00 0.00 37.34 2.69
1780 1966 3.985279 CGAATACACGAGGAAACACTCAA 59.015 43.478 0.00 0.00 37.34 3.02
1781 1967 3.005050 ACGAATACACGAGGAAACACTCA 59.995 43.478 0.00 0.00 37.34 3.41
1782 1968 3.572584 ACGAATACACGAGGAAACACTC 58.427 45.455 0.00 0.00 37.03 3.51
1783 1969 3.572584 GACGAATACACGAGGAAACACT 58.427 45.455 0.00 0.00 37.03 3.55
1784 1970 2.340577 CGACGAATACACGAGGAAACAC 59.659 50.000 0.00 0.00 37.03 3.32
1785 1971 2.030893 ACGACGAATACACGAGGAAACA 60.031 45.455 0.00 0.00 37.03 2.83
1786 1972 2.340577 CACGACGAATACACGAGGAAAC 59.659 50.000 0.00 0.00 37.03 2.78
1787 1973 2.030893 ACACGACGAATACACGAGGAAA 60.031 45.455 0.00 0.00 37.03 3.13
1788 1974 1.536766 ACACGACGAATACACGAGGAA 59.463 47.619 0.00 0.00 37.03 3.36
1789 1975 1.159285 ACACGACGAATACACGAGGA 58.841 50.000 0.00 0.00 37.03 3.71
1790 1976 1.909532 GAACACGACGAATACACGAGG 59.090 52.381 0.00 0.00 37.03 4.63
1791 1977 2.847901 AGAACACGACGAATACACGAG 58.152 47.619 0.00 0.00 37.03 4.18
1792 1978 2.975410 AGAACACGACGAATACACGA 57.025 45.000 0.00 0.00 37.03 4.35
1793 1979 2.024875 CGAAGAACACGACGAATACACG 59.975 50.000 0.00 0.00 39.31 4.49
1794 1980 2.975851 ACGAAGAACACGACGAATACAC 59.024 45.455 0.00 0.00 34.70 2.90
1795 1981 2.975193 CACGAAGAACACGACGAATACA 59.025 45.455 0.00 0.00 34.70 2.29
1796 1982 2.340577 CCACGAAGAACACGACGAATAC 59.659 50.000 0.00 0.00 34.70 1.89
1797 1983 2.587956 CCACGAAGAACACGACGAATA 58.412 47.619 0.00 0.00 34.70 1.75
1798 1984 1.415374 CCACGAAGAACACGACGAAT 58.585 50.000 0.00 0.00 34.70 3.34
1799 1985 0.595567 CCCACGAAGAACACGACGAA 60.596 55.000 0.00 0.00 34.70 3.85
1800 1986 1.008194 CCCACGAAGAACACGACGA 60.008 57.895 0.00 0.00 34.70 4.20
1801 1987 0.388134 ATCCCACGAAGAACACGACG 60.388 55.000 0.00 0.00 34.70 5.12
1802 1988 1.347320 GATCCCACGAAGAACACGAC 58.653 55.000 0.00 0.00 34.70 4.34
1803 1989 0.245539 GGATCCCACGAAGAACACGA 59.754 55.000 0.00 0.00 34.70 4.35
1804 1990 0.739813 GGGATCCCACGAAGAACACG 60.740 60.000 26.95 0.00 35.81 4.49
1805 1991 0.392595 GGGGATCCCACGAAGAACAC 60.393 60.000 32.07 6.86 44.65 3.32
1806 1992 1.988015 GGGGATCCCACGAAGAACA 59.012 57.895 32.07 0.00 44.65 3.18
1807 1993 4.957164 GGGGATCCCACGAAGAAC 57.043 61.111 32.07 8.42 44.65 3.01
1816 2002 4.166144 TCTTTCACAAATAGAGGGGATCCC 59.834 45.833 23.95 23.95 45.90 3.85
1817 2003 5.373812 TCTTTCACAAATAGAGGGGATCC 57.626 43.478 1.92 1.92 0.00 3.36
1818 2004 5.698545 CGATCTTTCACAAATAGAGGGGATC 59.301 44.000 0.00 0.00 0.00 3.36
1819 2005 5.455326 CCGATCTTTCACAAATAGAGGGGAT 60.455 44.000 0.00 0.00 0.00 3.85
1820 2006 4.141711 CCGATCTTTCACAAATAGAGGGGA 60.142 45.833 0.00 0.00 0.00 4.81
1821 2007 4.130118 CCGATCTTTCACAAATAGAGGGG 58.870 47.826 0.00 0.00 0.00 4.79
1822 2008 3.561725 GCCGATCTTTCACAAATAGAGGG 59.438 47.826 0.00 0.00 0.00 4.30
1823 2009 3.561725 GGCCGATCTTTCACAAATAGAGG 59.438 47.826 0.00 0.00 0.00 3.69
1824 2010 4.446371 AGGCCGATCTTTCACAAATAGAG 58.554 43.478 0.00 0.00 0.00 2.43
1825 2011 4.487714 AGGCCGATCTTTCACAAATAGA 57.512 40.909 0.00 0.00 0.00 1.98
1826 2012 5.237344 CCTAAGGCCGATCTTTCACAAATAG 59.763 44.000 0.00 0.00 0.00 1.73
1827 2013 5.123227 CCTAAGGCCGATCTTTCACAAATA 58.877 41.667 0.00 0.00 0.00 1.40
1828 2014 3.947834 CCTAAGGCCGATCTTTCACAAAT 59.052 43.478 0.00 0.00 0.00 2.32
1829 2015 3.343617 CCTAAGGCCGATCTTTCACAAA 58.656 45.455 0.00 0.00 0.00 2.83
1830 2016 2.355716 CCCTAAGGCCGATCTTTCACAA 60.356 50.000 0.00 0.00 0.00 3.33
1831 2017 1.209504 CCCTAAGGCCGATCTTTCACA 59.790 52.381 0.00 0.00 0.00 3.58
1832 2018 1.209747 ACCCTAAGGCCGATCTTTCAC 59.790 52.381 0.00 0.00 36.11 3.18
1833 2019 1.580059 ACCCTAAGGCCGATCTTTCA 58.420 50.000 0.00 0.00 36.11 2.69
1834 2020 2.562635 GAACCCTAAGGCCGATCTTTC 58.437 52.381 0.00 0.00 36.11 2.62
1835 2021 1.212195 GGAACCCTAAGGCCGATCTTT 59.788 52.381 0.00 0.00 36.11 2.52
1836 2022 0.837940 GGAACCCTAAGGCCGATCTT 59.162 55.000 0.00 0.00 36.11 2.40
1837 2023 0.326238 TGGAACCCTAAGGCCGATCT 60.326 55.000 0.00 0.00 36.11 2.75
1838 2024 0.179054 GTGGAACCCTAAGGCCGATC 60.179 60.000 0.00 0.00 36.11 3.69
1839 2025 1.912971 GTGGAACCCTAAGGCCGAT 59.087 57.895 0.00 0.00 36.11 4.18
1840 2026 3.395630 GTGGAACCCTAAGGCCGA 58.604 61.111 0.00 0.00 36.11 5.54
1851 2037 3.054361 ACCAAGATGATGTAGGGTGGAAC 60.054 47.826 0.00 0.00 0.00 3.62
1852 2038 3.189606 ACCAAGATGATGTAGGGTGGAA 58.810 45.455 0.00 0.00 0.00 3.53
1853 2039 2.845659 ACCAAGATGATGTAGGGTGGA 58.154 47.619 0.00 0.00 0.00 4.02
1854 2040 4.347876 TGATACCAAGATGATGTAGGGTGG 59.652 45.833 0.00 0.00 0.00 4.61
1855 2041 5.305386 TCTGATACCAAGATGATGTAGGGTG 59.695 44.000 0.00 0.00 0.00 4.61
1856 2042 5.467738 TCTGATACCAAGATGATGTAGGGT 58.532 41.667 0.00 0.00 0.00 4.34
1857 2043 5.568423 GCTCTGATACCAAGATGATGTAGGG 60.568 48.000 0.00 0.00 0.00 3.53
1858 2044 5.477510 GCTCTGATACCAAGATGATGTAGG 58.522 45.833 0.00 0.00 0.00 3.18
1859 2045 5.011431 TGGCTCTGATACCAAGATGATGTAG 59.989 44.000 0.00 0.00 31.46 2.74
1860 2046 4.901250 TGGCTCTGATACCAAGATGATGTA 59.099 41.667 0.00 0.00 31.46 2.29
1861 2047 3.713248 TGGCTCTGATACCAAGATGATGT 59.287 43.478 0.00 0.00 31.46 3.06
1862 2048 4.063689 GTGGCTCTGATACCAAGATGATG 58.936 47.826 1.51 0.00 37.79 3.07
1863 2049 3.244009 CGTGGCTCTGATACCAAGATGAT 60.244 47.826 6.88 0.00 37.60 2.45
1864 2050 2.101415 CGTGGCTCTGATACCAAGATGA 59.899 50.000 6.88 0.00 37.60 2.92
1865 2051 2.477825 CGTGGCTCTGATACCAAGATG 58.522 52.381 6.88 0.00 37.60 2.90
1866 2052 1.202580 GCGTGGCTCTGATACCAAGAT 60.203 52.381 14.11 0.00 37.60 2.40
1867 2053 0.175760 GCGTGGCTCTGATACCAAGA 59.824 55.000 14.11 0.00 37.60 3.02
1868 2054 0.176680 AGCGTGGCTCTGATACCAAG 59.823 55.000 7.96 7.96 37.79 3.61
1869 2055 0.108186 CAGCGTGGCTCTGATACCAA 60.108 55.000 1.51 0.00 36.40 3.67
1870 2056 0.970427 TCAGCGTGGCTCTGATACCA 60.970 55.000 0.00 0.00 36.40 3.25
1871 2057 0.390860 ATCAGCGTGGCTCTGATACC 59.609 55.000 13.13 0.00 46.22 2.73
1872 2058 3.976339 ATCAGCGTGGCTCTGATAC 57.024 52.632 13.13 0.00 46.22 2.24
1875 2061 1.216444 GTGATCAGCGTGGCTCTGA 59.784 57.895 0.00 7.03 43.79 3.27
1876 2062 2.163390 CGTGATCAGCGTGGCTCTG 61.163 63.158 0.00 0.00 36.40 3.35
1877 2063 1.877576 TTCGTGATCAGCGTGGCTCT 61.878 55.000 14.43 0.00 36.40 4.09
1878 2064 0.807667 ATTCGTGATCAGCGTGGCTC 60.808 55.000 14.43 0.00 36.40 4.70
1879 2065 0.391661 AATTCGTGATCAGCGTGGCT 60.392 50.000 14.43 0.00 40.77 4.75
1880 2066 0.447801 AAATTCGTGATCAGCGTGGC 59.552 50.000 14.43 0.00 0.00 5.01
1881 2067 1.202065 CCAAATTCGTGATCAGCGTGG 60.202 52.381 14.43 11.61 0.00 4.94
1882 2068 1.202065 CCCAAATTCGTGATCAGCGTG 60.202 52.381 14.43 7.77 0.00 5.34
1883 2069 1.086696 CCCAAATTCGTGATCAGCGT 58.913 50.000 14.43 0.00 0.00 5.07
1884 2070 0.378257 CCCCAAATTCGTGATCAGCG 59.622 55.000 0.00 3.36 0.00 5.18
1885 2071 1.463674 ACCCCAAATTCGTGATCAGC 58.536 50.000 0.00 0.00 0.00 4.26
1886 2072 3.119495 GGAAACCCCAAATTCGTGATCAG 60.119 47.826 0.00 0.00 34.14 2.90
1887 2073 2.823154 GGAAACCCCAAATTCGTGATCA 59.177 45.455 0.00 0.00 34.14 2.92
1888 2074 3.503827 GGAAACCCCAAATTCGTGATC 57.496 47.619 0.00 0.00 34.14 2.92
1903 2089 2.422479 GCTAGAAAACGATGGGGGAAAC 59.578 50.000 0.00 0.00 0.00 2.78
1904 2090 2.619590 GGCTAGAAAACGATGGGGGAAA 60.620 50.000 0.00 0.00 0.00 3.13
1905 2091 1.064979 GGCTAGAAAACGATGGGGGAA 60.065 52.381 0.00 0.00 0.00 3.97
1906 2092 0.544697 GGCTAGAAAACGATGGGGGA 59.455 55.000 0.00 0.00 0.00 4.81
1907 2093 0.546598 AGGCTAGAAAACGATGGGGG 59.453 55.000 0.00 0.00 0.00 5.40
1908 2094 2.017049 CAAGGCTAGAAAACGATGGGG 58.983 52.381 0.00 0.00 0.00 4.96
1909 2095 2.711542 ACAAGGCTAGAAAACGATGGG 58.288 47.619 0.00 0.00 0.00 4.00
1910 2096 4.766404 AAACAAGGCTAGAAAACGATGG 57.234 40.909 0.00 0.00 0.00 3.51
1911 2097 4.382754 GCAAAACAAGGCTAGAAAACGATG 59.617 41.667 0.00 0.00 0.00 3.84
1912 2098 4.278419 AGCAAAACAAGGCTAGAAAACGAT 59.722 37.500 0.00 0.00 38.90 3.73
1913 2099 3.630312 AGCAAAACAAGGCTAGAAAACGA 59.370 39.130 0.00 0.00 38.90 3.85
1914 2100 3.964909 AGCAAAACAAGGCTAGAAAACG 58.035 40.909 0.00 0.00 38.90 3.60
1915 2101 4.441087 CGAAGCAAAACAAGGCTAGAAAAC 59.559 41.667 0.00 0.00 40.01 2.43
1916 2102 4.097286 ACGAAGCAAAACAAGGCTAGAAAA 59.903 37.500 0.00 0.00 40.01 2.29
1917 2103 3.630312 ACGAAGCAAAACAAGGCTAGAAA 59.370 39.130 0.00 0.00 40.01 2.52
1918 2104 3.211045 ACGAAGCAAAACAAGGCTAGAA 58.789 40.909 0.00 0.00 40.01 2.10
1919 2105 2.806244 GACGAAGCAAAACAAGGCTAGA 59.194 45.455 0.00 0.00 40.01 2.43
1920 2106 2.095718 GGACGAAGCAAAACAAGGCTAG 60.096 50.000 0.00 0.00 40.01 3.42
1921 2107 1.877443 GGACGAAGCAAAACAAGGCTA 59.123 47.619 0.00 0.00 40.01 3.93
1922 2108 0.668535 GGACGAAGCAAAACAAGGCT 59.331 50.000 0.00 0.00 43.46 4.58
1923 2109 0.668535 AGGACGAAGCAAAACAAGGC 59.331 50.000 0.00 0.00 0.00 4.35
1924 2110 4.561735 TTTAGGACGAAGCAAAACAAGG 57.438 40.909 0.00 0.00 0.00 3.61
1925 2111 6.129457 CGAAATTTAGGACGAAGCAAAACAAG 60.129 38.462 0.00 0.00 0.00 3.16
1926 2112 5.683743 CGAAATTTAGGACGAAGCAAAACAA 59.316 36.000 0.00 0.00 0.00 2.83
1927 2113 5.007823 TCGAAATTTAGGACGAAGCAAAACA 59.992 36.000 0.00 0.00 0.00 2.83
1928 2114 5.445845 TCGAAATTTAGGACGAAGCAAAAC 58.554 37.500 0.00 0.00 0.00 2.43
1929 2115 5.676532 TCGAAATTTAGGACGAAGCAAAA 57.323 34.783 0.00 0.00 0.00 2.44
1930 2116 5.676532 TTCGAAATTTAGGACGAAGCAAA 57.323 34.783 7.99 0.00 39.27 3.68
1931 2117 5.676532 TTTCGAAATTTAGGACGAAGCAA 57.323 34.783 6.47 0.00 43.54 3.91
1932 2118 5.676532 TTTTCGAAATTTAGGACGAAGCA 57.323 34.783 12.12 2.67 43.54 3.91
1933 2119 6.250739 GGAATTTTCGAAATTTAGGACGAAGC 59.749 38.462 12.12 0.00 43.54 3.86
1934 2120 6.745907 GGGAATTTTCGAAATTTAGGACGAAG 59.254 38.462 12.12 0.00 43.54 3.79
1935 2121 6.349528 GGGGAATTTTCGAAATTTAGGACGAA 60.350 38.462 12.12 7.99 41.69 3.85
1936 2122 5.124297 GGGGAATTTTCGAAATTTAGGACGA 59.876 40.000 12.12 0.00 0.00 4.20
1937 2123 5.106078 TGGGGAATTTTCGAAATTTAGGACG 60.106 40.000 12.12 0.00 0.00 4.79
1938 2124 6.097356 GTGGGGAATTTTCGAAATTTAGGAC 58.903 40.000 12.12 6.17 0.00 3.85
1939 2125 5.775701 TGTGGGGAATTTTCGAAATTTAGGA 59.224 36.000 12.12 0.00 0.00 2.94
1940 2126 6.031751 TGTGGGGAATTTTCGAAATTTAGG 57.968 37.500 12.12 0.00 0.00 2.69
1941 2127 7.954788 TTTGTGGGGAATTTTCGAAATTTAG 57.045 32.000 12.12 0.00 0.00 1.85
1942 2128 8.732746 TTTTTGTGGGGAATTTTCGAAATTTA 57.267 26.923 12.12 0.00 0.00 1.40
1943 2129 7.631717 TTTTTGTGGGGAATTTTCGAAATTT 57.368 28.000 12.12 14.24 0.00 1.82
1944 2130 7.815840 ATTTTTGTGGGGAATTTTCGAAATT 57.184 28.000 12.12 5.37 0.00 1.82
1945 2131 8.371699 TCTATTTTTGTGGGGAATTTTCGAAAT 58.628 29.630 12.12 0.00 0.00 2.17
1946 2132 7.654116 GTCTATTTTTGTGGGGAATTTTCGAAA 59.346 33.333 6.47 6.47 0.00 3.46
1947 2133 7.149307 GTCTATTTTTGTGGGGAATTTTCGAA 58.851 34.615 0.00 0.00 0.00 3.71
1948 2134 6.294843 GGTCTATTTTTGTGGGGAATTTTCGA 60.295 38.462 0.00 0.00 0.00 3.71
1949 2135 5.867174 GGTCTATTTTTGTGGGGAATTTTCG 59.133 40.000 0.00 0.00 0.00 3.46
1950 2136 6.170506 GGGTCTATTTTTGTGGGGAATTTTC 58.829 40.000 0.00 0.00 0.00 2.29
1951 2137 5.608860 TGGGTCTATTTTTGTGGGGAATTTT 59.391 36.000 0.00 0.00 0.00 1.82
1952 2138 5.158889 TGGGTCTATTTTTGTGGGGAATTT 58.841 37.500 0.00 0.00 0.00 1.82
1953 2139 4.757692 TGGGTCTATTTTTGTGGGGAATT 58.242 39.130 0.00 0.00 0.00 2.17
1954 2140 4.412060 TGGGTCTATTTTTGTGGGGAAT 57.588 40.909 0.00 0.00 0.00 3.01
1955 2141 3.905493 TGGGTCTATTTTTGTGGGGAA 57.095 42.857 0.00 0.00 0.00 3.97
1956 2142 3.905493 TTGGGTCTATTTTTGTGGGGA 57.095 42.857 0.00 0.00 0.00 4.81
1957 2143 5.497464 AAATTGGGTCTATTTTTGTGGGG 57.503 39.130 0.00 0.00 0.00 4.96
1979 2165 7.912056 TCATCAAACCAACAAATCACAAAAA 57.088 28.000 0.00 0.00 0.00 1.94
1980 2166 7.551974 ACATCATCAAACCAACAAATCACAAAA 59.448 29.630 0.00 0.00 0.00 2.44
1981 2167 7.046652 ACATCATCAAACCAACAAATCACAAA 58.953 30.769 0.00 0.00 0.00 2.83
1982 2168 6.580788 ACATCATCAAACCAACAAATCACAA 58.419 32.000 0.00 0.00 0.00 3.33
1983 2169 6.159299 ACATCATCAAACCAACAAATCACA 57.841 33.333 0.00 0.00 0.00 3.58
1984 2170 7.481275 AAACATCATCAAACCAACAAATCAC 57.519 32.000 0.00 0.00 0.00 3.06
1985 2171 7.551974 ACAAAACATCATCAAACCAACAAATCA 59.448 29.630 0.00 0.00 0.00 2.57
1986 2172 7.918643 ACAAAACATCATCAAACCAACAAATC 58.081 30.769 0.00 0.00 0.00 2.17
1987 2173 7.862512 ACAAAACATCATCAAACCAACAAAT 57.137 28.000 0.00 0.00 0.00 2.32
1988 2174 7.388776 TCAACAAAACATCATCAAACCAACAAA 59.611 29.630 0.00 0.00 0.00 2.83
1989 2175 6.875726 TCAACAAAACATCATCAAACCAACAA 59.124 30.769 0.00 0.00 0.00 2.83
1990 2176 6.401394 TCAACAAAACATCATCAAACCAACA 58.599 32.000 0.00 0.00 0.00 3.33
1991 2177 6.900568 TCAACAAAACATCATCAAACCAAC 57.099 33.333 0.00 0.00 0.00 3.77
1992 2178 8.503458 AAATCAACAAAACATCATCAAACCAA 57.497 26.923 0.00 0.00 0.00 3.67
1993 2179 8.396390 CAAAATCAACAAAACATCATCAAACCA 58.604 29.630 0.00 0.00 0.00 3.67
1994 2180 8.610896 TCAAAATCAACAAAACATCATCAAACC 58.389 29.630 0.00 0.00 0.00 3.27
1997 2183 9.327628 ACATCAAAATCAACAAAACATCATCAA 57.672 25.926 0.00 0.00 0.00 2.57
1998 2184 8.890124 ACATCAAAATCAACAAAACATCATCA 57.110 26.923 0.00 0.00 0.00 3.07
2001 2187 9.205719 CCATACATCAAAATCAACAAAACATCA 57.794 29.630 0.00 0.00 0.00 3.07
2002 2188 9.421806 TCCATACATCAAAATCAACAAAACATC 57.578 29.630 0.00 0.00 0.00 3.06
2003 2189 9.947433 ATCCATACATCAAAATCAACAAAACAT 57.053 25.926 0.00 0.00 0.00 2.71
2004 2190 9.775854 AATCCATACATCAAAATCAACAAAACA 57.224 25.926 0.00 0.00 0.00 2.83
2007 2193 9.585099 GCTAATCCATACATCAAAATCAACAAA 57.415 29.630 0.00 0.00 0.00 2.83
2008 2194 8.970020 AGCTAATCCATACATCAAAATCAACAA 58.030 29.630 0.00 0.00 0.00 2.83
2009 2195 8.407832 CAGCTAATCCATACATCAAAATCAACA 58.592 33.333 0.00 0.00 0.00 3.33
2010 2196 8.408601 ACAGCTAATCCATACATCAAAATCAAC 58.591 33.333 0.00 0.00 0.00 3.18
2011 2197 8.407832 CACAGCTAATCCATACATCAAAATCAA 58.592 33.333 0.00 0.00 0.00 2.57
2012 2198 7.557358 ACACAGCTAATCCATACATCAAAATCA 59.443 33.333 0.00 0.00 0.00 2.57
2013 2199 7.934457 ACACAGCTAATCCATACATCAAAATC 58.066 34.615 0.00 0.00 0.00 2.17
2014 2200 7.886629 ACACAGCTAATCCATACATCAAAAT 57.113 32.000 0.00 0.00 0.00 1.82
2015 2201 7.537715 CAACACAGCTAATCCATACATCAAAA 58.462 34.615 0.00 0.00 0.00 2.44
2016 2202 6.404623 GCAACACAGCTAATCCATACATCAAA 60.405 38.462 0.00 0.00 0.00 2.69
2017 2203 5.066375 GCAACACAGCTAATCCATACATCAA 59.934 40.000 0.00 0.00 0.00 2.57
2018 2204 4.576053 GCAACACAGCTAATCCATACATCA 59.424 41.667 0.00 0.00 0.00 3.07
2019 2205 4.576053 TGCAACACAGCTAATCCATACATC 59.424 41.667 0.00 0.00 34.99 3.06
2020 2206 4.525996 TGCAACACAGCTAATCCATACAT 58.474 39.130 0.00 0.00 34.99 2.29
2021 2207 3.949132 TGCAACACAGCTAATCCATACA 58.051 40.909 0.00 0.00 34.99 2.29
2022 2208 4.396166 ACTTGCAACACAGCTAATCCATAC 59.604 41.667 0.00 0.00 34.99 2.39
2023 2209 4.395854 CACTTGCAACACAGCTAATCCATA 59.604 41.667 0.00 0.00 34.99 2.74
2024 2210 3.192001 CACTTGCAACACAGCTAATCCAT 59.808 43.478 0.00 0.00 34.99 3.41
2025 2211 2.553602 CACTTGCAACACAGCTAATCCA 59.446 45.455 0.00 0.00 34.99 3.41
2026 2212 2.095059 CCACTTGCAACACAGCTAATCC 60.095 50.000 0.00 0.00 34.99 3.01
2027 2213 2.813754 TCCACTTGCAACACAGCTAATC 59.186 45.455 0.00 0.00 34.99 1.75
2028 2214 2.862541 TCCACTTGCAACACAGCTAAT 58.137 42.857 0.00 0.00 34.99 1.73
2029 2215 2.340210 TCCACTTGCAACACAGCTAA 57.660 45.000 0.00 0.00 34.99 3.09
2030 2216 2.038952 AGATCCACTTGCAACACAGCTA 59.961 45.455 0.00 0.00 34.99 3.32
2031 2217 1.202855 AGATCCACTTGCAACACAGCT 60.203 47.619 0.00 0.00 34.99 4.24
2032 2218 1.242076 AGATCCACTTGCAACACAGC 58.758 50.000 0.00 0.00 0.00 4.40
2033 2219 3.189287 GGTTAGATCCACTTGCAACACAG 59.811 47.826 0.00 0.00 0.00 3.66
2034 2220 3.146066 GGTTAGATCCACTTGCAACACA 58.854 45.455 0.00 0.00 0.00 3.72
2035 2221 3.412386 AGGTTAGATCCACTTGCAACAC 58.588 45.455 0.00 0.00 0.00 3.32
2036 2222 3.788227 AGGTTAGATCCACTTGCAACA 57.212 42.857 0.00 0.00 0.00 3.33
2037 2223 4.082733 GGAAAGGTTAGATCCACTTGCAAC 60.083 45.833 0.00 0.00 33.30 4.17
2038 2224 4.079253 GGAAAGGTTAGATCCACTTGCAA 58.921 43.478 0.00 0.00 33.30 4.08
2039 2225 3.561313 GGGAAAGGTTAGATCCACTTGCA 60.561 47.826 0.00 0.00 34.82 4.08
2040 2226 3.017442 GGGAAAGGTTAGATCCACTTGC 58.983 50.000 0.00 0.00 34.82 4.01
2041 2227 3.010138 TGGGGAAAGGTTAGATCCACTTG 59.990 47.826 0.00 0.00 37.54 3.16
2042 2228 3.010250 GTGGGGAAAGGTTAGATCCACTT 59.990 47.826 0.00 0.00 39.80 3.16
2043 2229 2.576648 GTGGGGAAAGGTTAGATCCACT 59.423 50.000 0.00 0.00 39.80 4.00
2044 2230 2.356844 GGTGGGGAAAGGTTAGATCCAC 60.357 54.545 0.00 0.00 41.54 4.02
2045 2231 1.920351 GGTGGGGAAAGGTTAGATCCA 59.080 52.381 0.00 0.00 34.82 3.41
2046 2232 1.920351 TGGTGGGGAAAGGTTAGATCC 59.080 52.381 0.00 0.00 0.00 3.36
2047 2233 3.459969 AGATGGTGGGGAAAGGTTAGATC 59.540 47.826 0.00 0.00 0.00 2.75
2048 2234 3.459969 GAGATGGTGGGGAAAGGTTAGAT 59.540 47.826 0.00 0.00 0.00 1.98
2049 2235 2.844348 GAGATGGTGGGGAAAGGTTAGA 59.156 50.000 0.00 0.00 0.00 2.10
2050 2236 2.092375 GGAGATGGTGGGGAAAGGTTAG 60.092 54.545 0.00 0.00 0.00 2.34
2051 2237 1.920351 GGAGATGGTGGGGAAAGGTTA 59.080 52.381 0.00 0.00 0.00 2.85
2052 2238 0.704664 GGAGATGGTGGGGAAAGGTT 59.295 55.000 0.00 0.00 0.00 3.50
2053 2239 0.477597 TGGAGATGGTGGGGAAAGGT 60.478 55.000 0.00 0.00 0.00 3.50
2054 2240 0.034089 GTGGAGATGGTGGGGAAAGG 60.034 60.000 0.00 0.00 0.00 3.11
2055 2241 0.034089 GGTGGAGATGGTGGGGAAAG 60.034 60.000 0.00 0.00 0.00 2.62
2056 2242 1.847798 CGGTGGAGATGGTGGGGAAA 61.848 60.000 0.00 0.00 0.00 3.13
2057 2243 2.297895 CGGTGGAGATGGTGGGGAA 61.298 63.158 0.00 0.00 0.00 3.97
2058 2244 2.687200 CGGTGGAGATGGTGGGGA 60.687 66.667 0.00 0.00 0.00 4.81
2059 2245 4.489771 GCGGTGGAGATGGTGGGG 62.490 72.222 0.00 0.00 0.00 4.96
2060 2246 4.838152 CGCGGTGGAGATGGTGGG 62.838 72.222 0.00 0.00 0.00 4.61
2061 2247 2.796483 TTTCGCGGTGGAGATGGTGG 62.796 60.000 6.13 0.00 0.00 4.61
2062 2248 0.744414 ATTTCGCGGTGGAGATGGTG 60.744 55.000 6.13 0.00 0.00 4.17
2063 2249 0.462047 GATTTCGCGGTGGAGATGGT 60.462 55.000 6.13 0.00 0.00 3.55
2064 2250 1.160329 GGATTTCGCGGTGGAGATGG 61.160 60.000 6.13 0.00 0.00 3.51
2065 2251 0.461870 TGGATTTCGCGGTGGAGATG 60.462 55.000 6.13 0.00 0.00 2.90
2066 2252 0.469917 ATGGATTTCGCGGTGGAGAT 59.530 50.000 6.13 0.00 0.00 2.75
2067 2253 1.116308 TATGGATTTCGCGGTGGAGA 58.884 50.000 6.13 0.00 0.00 3.71
2068 2254 1.948104 TTATGGATTTCGCGGTGGAG 58.052 50.000 6.13 0.00 0.00 3.86
2069 2255 2.404923 TTTATGGATTTCGCGGTGGA 57.595 45.000 6.13 0.00 0.00 4.02
2070 2256 3.495670 TTTTTATGGATTTCGCGGTGG 57.504 42.857 6.13 0.00 0.00 4.61
2097 2283 4.518249 ACAGGGAGAAATTCGAGGATTTC 58.482 43.478 12.64 12.64 43.24 2.17
2098 2284 4.576330 ACAGGGAGAAATTCGAGGATTT 57.424 40.909 0.00 0.00 32.16 2.17
2099 2285 4.576330 AACAGGGAGAAATTCGAGGATT 57.424 40.909 0.00 0.00 0.00 3.01
2100 2286 4.576330 AAACAGGGAGAAATTCGAGGAT 57.424 40.909 0.00 0.00 0.00 3.24
2101 2287 4.324267 GAAAACAGGGAGAAATTCGAGGA 58.676 43.478 0.00 0.00 0.00 3.71
2102 2288 3.125316 CGAAAACAGGGAGAAATTCGAGG 59.875 47.826 0.00 0.00 41.39 4.63
2103 2289 3.994392 TCGAAAACAGGGAGAAATTCGAG 59.006 43.478 4.51 0.00 42.32 4.04
2104 2290 3.994392 CTCGAAAACAGGGAGAAATTCGA 59.006 43.478 7.97 7.97 44.18 3.71
2105 2291 3.746492 ACTCGAAAACAGGGAGAAATTCG 59.254 43.478 0.00 0.00 40.54 3.34
2106 2292 5.238650 TGAACTCGAAAACAGGGAGAAATTC 59.761 40.000 0.00 0.00 0.00 2.17
2107 2293 5.130350 TGAACTCGAAAACAGGGAGAAATT 58.870 37.500 0.00 0.00 0.00 1.82
2108 2294 4.714632 TGAACTCGAAAACAGGGAGAAAT 58.285 39.130 0.00 0.00 0.00 2.17
2109 2295 4.145365 TGAACTCGAAAACAGGGAGAAA 57.855 40.909 0.00 0.00 0.00 2.52
2110 2296 3.830744 TGAACTCGAAAACAGGGAGAA 57.169 42.857 0.00 0.00 0.00 2.87
2111 2297 3.306780 GGATGAACTCGAAAACAGGGAGA 60.307 47.826 0.00 0.00 0.00 3.71
2112 2298 3.003480 GGATGAACTCGAAAACAGGGAG 58.997 50.000 0.00 0.00 0.00 4.30
2113 2299 2.290071 GGGATGAACTCGAAAACAGGGA 60.290 50.000 0.00 0.00 0.00 4.20
2114 2300 2.084546 GGGATGAACTCGAAAACAGGG 58.915 52.381 0.00 0.00 0.00 4.45
2115 2301 1.732259 CGGGATGAACTCGAAAACAGG 59.268 52.381 0.00 0.00 46.62 4.00
2123 2309 1.066587 GAGGCTCGGGATGAACTCG 59.933 63.158 0.00 0.00 44.81 4.18
2124 2310 0.179097 GTGAGGCTCGGGATGAACTC 60.179 60.000 10.42 0.00 33.48 3.01
2125 2311 1.617947 GGTGAGGCTCGGGATGAACT 61.618 60.000 10.42 0.00 0.00 3.01
2126 2312 1.153349 GGTGAGGCTCGGGATGAAC 60.153 63.158 10.42 0.00 0.00 3.18
2127 2313 2.367202 GGGTGAGGCTCGGGATGAA 61.367 63.158 10.42 0.00 0.00 2.57
2128 2314 2.764128 GGGTGAGGCTCGGGATGA 60.764 66.667 10.42 0.00 0.00 2.92
2129 2315 4.227134 CGGGTGAGGCTCGGGATG 62.227 72.222 10.42 0.00 37.44 3.51
2138 2324 2.978010 AACTTTGCGCGGGTGAGG 60.978 61.111 8.83 0.00 0.00 3.86
2139 2325 2.250939 TCAACTTTGCGCGGGTGAG 61.251 57.895 8.83 3.20 0.00 3.51
2140 2326 2.203084 TCAACTTTGCGCGGGTGA 60.203 55.556 8.83 10.69 0.00 4.02
2141 2327 2.051345 GTCAACTTTGCGCGGGTG 60.051 61.111 8.83 4.59 0.00 4.61
2142 2328 3.284449 GGTCAACTTTGCGCGGGT 61.284 61.111 8.83 0.00 0.00 5.28
2143 2329 2.978010 AGGTCAACTTTGCGCGGG 60.978 61.111 8.83 0.00 0.00 6.13
2144 2330 2.252260 CAGGTCAACTTTGCGCGG 59.748 61.111 8.83 0.00 0.00 6.46
2145 2331 2.427410 GCAGGTCAACTTTGCGCG 60.427 61.111 0.00 0.00 0.00 6.86
2146 2332 2.050077 GGCAGGTCAACTTTGCGC 60.050 61.111 0.00 0.00 38.69 6.09
2147 2333 1.283793 CAGGCAGGTCAACTTTGCG 59.716 57.895 0.00 0.00 38.69 4.85
2148 2334 0.823356 TCCAGGCAGGTCAACTTTGC 60.823 55.000 0.00 2.84 39.02 3.68
2149 2335 1.242076 CTCCAGGCAGGTCAACTTTG 58.758 55.000 0.00 0.00 39.02 2.77
2150 2336 0.538287 GCTCCAGGCAGGTCAACTTT 60.538 55.000 0.00 0.00 41.35 2.66
2151 2337 1.073897 GCTCCAGGCAGGTCAACTT 59.926 57.895 0.00 0.00 41.35 2.66
2152 2338 2.753029 GCTCCAGGCAGGTCAACT 59.247 61.111 0.00 0.00 41.35 3.16
2161 2347 4.554036 GGTCCGGATGCTCCAGGC 62.554 72.222 7.81 0.00 35.91 4.85
2162 2348 2.946988 TAGGGTCCGGATGCTCCAGG 62.947 65.000 7.81 5.35 35.91 4.45
2163 2349 1.048724 TTAGGGTCCGGATGCTCCAG 61.049 60.000 7.81 0.00 35.91 3.86
2164 2350 1.002403 TTAGGGTCCGGATGCTCCA 59.998 57.895 7.81 0.00 35.91 3.86
2165 2351 1.446366 GTTAGGGTCCGGATGCTCC 59.554 63.158 7.81 3.27 0.00 4.70
2166 2352 1.446366 GGTTAGGGTCCGGATGCTC 59.554 63.158 7.81 0.00 0.00 4.26
2167 2353 2.070650 GGGTTAGGGTCCGGATGCT 61.071 63.158 7.81 0.00 0.00 3.79
2168 2354 2.509422 GGGTTAGGGTCCGGATGC 59.491 66.667 7.81 0.00 0.00 3.91
2169 2355 2.819550 CGGGTTAGGGTCCGGATG 59.180 66.667 7.81 0.00 42.32 3.51
2173 2359 1.119574 ATGATCCGGGTTAGGGTCCG 61.120 60.000 0.00 0.00 40.68 4.79
2174 2360 0.685660 GATGATCCGGGTTAGGGTCC 59.314 60.000 0.00 0.00 40.68 4.46
2175 2361 0.685660 GGATGATCCGGGTTAGGGTC 59.314 60.000 0.00 0.00 41.74 4.46
2176 2362 0.767060 GGGATGATCCGGGTTAGGGT 60.767 60.000 5.22 0.00 37.43 4.34
2177 2363 1.827399 CGGGATGATCCGGGTTAGGG 61.827 65.000 10.90 0.00 45.78 3.53
2178 2364 1.671742 CGGGATGATCCGGGTTAGG 59.328 63.158 10.90 0.00 45.78 2.69
2186 2372 2.356793 CTCTGCGCGGGATGATCC 60.357 66.667 17.88 1.94 35.23 3.36
2187 2373 1.227380 AACTCTGCGCGGGATGATC 60.227 57.895 17.88 0.00 0.00 2.92
2188 2374 1.522355 CAACTCTGCGCGGGATGAT 60.522 57.895 17.88 0.00 0.00 2.45
2189 2375 2.125552 CAACTCTGCGCGGGATGA 60.126 61.111 17.88 1.54 0.00 2.92
2190 2376 1.970917 GAACAACTCTGCGCGGGATG 61.971 60.000 17.88 14.94 0.00 3.51
2191 2377 1.741770 GAACAACTCTGCGCGGGAT 60.742 57.895 17.88 1.21 0.00 3.85
2192 2378 2.357034 GAACAACTCTGCGCGGGA 60.357 61.111 17.88 9.62 0.00 5.14
2193 2379 3.423154 GGAACAACTCTGCGCGGG 61.423 66.667 17.88 9.81 0.00 6.13
2194 2380 2.664851 TGGAACAACTCTGCGCGG 60.665 61.111 10.86 10.86 31.92 6.46
2209 2395 1.404391 GCAGAGCATTCATCCACTTGG 59.596 52.381 0.00 0.00 0.00 3.61
2210 2396 2.355132 GAGCAGAGCATTCATCCACTTG 59.645 50.000 0.00 0.00 0.00 3.16
2223 2409 1.441311 GACAGGCTAGGAGCAGAGC 59.559 63.158 0.21 0.00 44.75 4.09
2290 2476 9.233649 CTGTAAGTACTATCATTAGGGAGGTAG 57.766 40.741 0.00 0.00 0.00 3.18
2291 2477 7.668886 GCTGTAAGTACTATCATTAGGGAGGTA 59.331 40.741 0.00 0.00 35.30 3.08
2295 2481 7.286215 GTGCTGTAAGTACTATCATTAGGGA 57.714 40.000 0.00 0.00 46.74 4.20
2332 2518 5.175090 TCACACACAAAACGCATTTATGA 57.825 34.783 0.20 0.00 0.00 2.15
2343 2529 2.223688 CGGGAGCAAATCACACACAAAA 60.224 45.455 0.00 0.00 0.00 2.44
2344 2530 1.336440 CGGGAGCAAATCACACACAAA 59.664 47.619 0.00 0.00 0.00 2.83
2348 2534 1.971167 GCCGGGAGCAAATCACACA 60.971 57.895 2.18 0.00 42.97 3.72
2378 2564 3.767711 AGGAGGTGGTTTCTGAATTTCC 58.232 45.455 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.