Multiple sequence alignment - TraesCS6D01G088300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G088300 chr6D 100.000 3089 0 0 1 3089 53608874 53605786 0.000000e+00 5705.0
1 TraesCS6D01G088300 chr6D 81.224 245 43 3 2285 2527 287023481 287023238 8.740000e-46 195.0
2 TraesCS6D01G088300 chr6A 91.693 1264 52 18 936 2168 61669532 61670773 0.000000e+00 1703.0
3 TraesCS6D01G088300 chr6A 83.542 480 51 16 3 471 61667751 61668213 1.020000e-114 424.0
4 TraesCS6D01G088300 chr6A 82.004 489 67 16 2205 2679 61670773 61671254 2.230000e-106 396.0
5 TraesCS6D01G088300 chr6A 83.516 91 13 2 2315 2404 479043822 479043911 1.970000e-12 84.2
6 TraesCS6D01G088300 chr6B 92.741 1047 44 17 960 2006 117862890 117863904 0.000000e+00 1483.0
7 TraesCS6D01G088300 chr6B 84.355 473 55 11 69 523 117861800 117862271 2.190000e-121 446.0
8 TraesCS6D01G088300 chr6B 86.047 129 14 3 742 867 117862723 117862850 5.370000e-28 135.0
9 TraesCS6D01G088300 chr6B 90.000 70 7 0 45 114 117862450 117862519 1.180000e-14 91.6
10 TraesCS6D01G088300 chr6B 93.182 44 2 1 995 1038 117862969 117863011 2.570000e-06 63.9
11 TraesCS6D01G088300 chr7A 82.520 246 37 6 2285 2526 658932792 658932549 8.680000e-51 211.0
12 TraesCS6D01G088300 chr4B 82.292 192 30 4 2345 2533 37847433 37847243 2.460000e-36 163.0
13 TraesCS6D01G088300 chr3D 76.420 352 50 22 2739 3061 496729049 496729396 3.190000e-35 159.0
14 TraesCS6D01G088300 chr3D 95.000 40 2 0 2408 2447 17842177 17842216 2.570000e-06 63.9
15 TraesCS6D01G088300 chr2D 82.576 132 18 4 2321 2447 250627574 250627705 9.050000e-21 111.0
16 TraesCS6D01G088300 chr1A 87.629 97 10 1 2395 2489 77278299 77278203 9.050000e-21 111.0
17 TraesCS6D01G088300 chr1D 88.235 85 9 1 295 379 425573222 425573139 1.960000e-17 100.0
18 TraesCS6D01G088300 chr3B 93.878 49 3 0 295 343 41855330 41855378 1.190000e-09 75.0
19 TraesCS6D01G088300 chr5A 85.246 61 7 1 2285 2343 479400916 479400856 9.250000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G088300 chr6D 53605786 53608874 3088 True 5705.0 5705 100.000000 1 3089 1 chr6D.!!$R1 3088
1 TraesCS6D01G088300 chr6A 61667751 61671254 3503 False 841.0 1703 85.746333 3 2679 3 chr6A.!!$F2 2676
2 TraesCS6D01G088300 chr6B 117861800 117863904 2104 False 443.9 1483 89.265000 45 2006 5 chr6B.!!$F1 1961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
905 1913 0.387239 GCTGCCGGTTGACATTTGTC 60.387 55.0 1.9 3.72 44.97 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2801 3848 0.033504 TGTTTGGACACTCGAGGAGC 59.966 55.0 18.41 4.75 32.04 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
146 148 8.599055 TTGCTATTGCTAGATAGACAGAATTG 57.401 34.615 0.00 0.00 40.48 2.32
226 233 6.925211 AGCCTTTTATCCTTTAACTTCTTGC 58.075 36.000 0.00 0.00 0.00 4.01
235 242 5.301551 TCCTTTAACTTCTTGCATTTGCTCA 59.698 36.000 3.94 0.00 42.66 4.26
272 279 6.564709 GGTTCCTAACCGAACTTGTAAAAT 57.435 37.500 1.88 0.00 42.62 1.82
349 356 8.089115 AGTTAAACTTCACTGCTCAATTACTC 57.911 34.615 0.00 0.00 0.00 2.59
378 385 4.385825 ACGACATGTTGGTCACATACTTT 58.614 39.130 17.50 0.00 45.06 2.66
452 476 3.933861 AGAAACACCAGTTCCTTGACT 57.066 42.857 0.00 0.00 36.84 3.41
457 481 1.071385 CACCAGTTCCTTGACTGCTCT 59.929 52.381 0.00 0.00 44.45 4.09
467 491 5.326069 TCCTTGACTGCTCTTACTAGTCTT 58.674 41.667 0.00 0.00 41.01 3.01
489 1372 3.738830 TCGGTTTATAAGGGATCGGTG 57.261 47.619 0.00 0.00 0.00 4.94
499 1382 1.134280 AGGGATCGGTGAAAGATGCTG 60.134 52.381 0.00 0.00 36.79 4.41
514 1397 8.704668 TGAAAGATGCTGTTAGATAATAGACCA 58.295 33.333 1.01 0.00 0.00 4.02
517 1400 7.891561 AGATGCTGTTAGATAATAGACCACTC 58.108 38.462 1.01 0.00 0.00 3.51
525 1408 4.517453 AGATAATAGACCACTCTCGTGCTC 59.483 45.833 0.00 0.00 39.86 4.26
556 1445 6.195165 GCATCGGCATAGTTTAAAAGAAGAG 58.805 40.000 0.00 0.00 40.72 2.85
562 1451 6.803807 GGCATAGTTTAAAAGAAGAGCACTTG 59.196 38.462 0.00 0.00 36.39 3.16
592 1482 8.897752 GTGTCCAAGAATGCTTATCTAGAAATT 58.102 33.333 0.00 0.00 31.81 1.82
602 1492 6.538742 TGCTTATCTAGAAATTACACTGGCAC 59.461 38.462 0.00 0.00 0.00 5.01
633 1610 3.057596 GCCATTCCACGATGAAACTTTGA 60.058 43.478 0.00 0.00 0.00 2.69
636 1613 5.402270 CCATTCCACGATGAAACTTTGAAAC 59.598 40.000 0.00 0.00 0.00 2.78
642 1619 4.638421 ACGATGAAACTTTGAAACCACTCA 59.362 37.500 0.00 0.00 0.00 3.41
656 1634 9.658799 TTGAAACCACTCAAAAATTCAACAATA 57.341 25.926 0.00 0.00 33.32 1.90
657 1635 9.829507 TGAAACCACTCAAAAATTCAACAATAT 57.170 25.926 0.00 0.00 0.00 1.28
666 1644 9.947669 TCAAAAATTCAACAATATTTGCCAAAG 57.052 25.926 0.00 0.00 0.00 2.77
669 1647 9.949174 AAAATTCAACAATATTTGCCAAAGAAC 57.051 25.926 0.00 0.00 0.00 3.01
671 1649 7.712264 TTCAACAATATTTGCCAAAGAACAG 57.288 32.000 0.00 0.00 0.00 3.16
744 1729 1.518133 ATCTGTTCTCGCGAGCAGC 60.518 57.895 30.97 21.40 45.03 5.25
745 1730 1.943116 ATCTGTTCTCGCGAGCAGCT 61.943 55.000 30.97 20.48 45.03 4.24
746 1731 1.137614 CTGTTCTCGCGAGCAGCTA 59.862 57.895 30.97 11.05 40.75 3.32
747 1732 1.136872 CTGTTCTCGCGAGCAGCTAC 61.137 60.000 30.97 20.71 40.75 3.58
748 1733 1.154016 GTTCTCGCGAGCAGCTACA 60.154 57.895 30.97 9.43 45.59 2.74
750 1735 2.874010 TTCTCGCGAGCAGCTACAGC 62.874 60.000 30.97 0.31 45.59 4.40
794 1798 2.630580 AGCAGGGATTATCCGAGAGAAC 59.369 50.000 5.03 0.00 37.43 3.01
853 1858 0.527565 GCAAACTCCCGTGATTGCAT 59.472 50.000 1.95 0.00 45.61 3.96
880 1885 2.538037 TGCCGTCGACAAATGATAATCG 59.462 45.455 17.16 0.00 35.91 3.34
901 1909 1.973281 CTGGCTGCCGGTTGACATT 60.973 57.895 19.55 0.00 0.00 2.71
902 1910 1.526575 CTGGCTGCCGGTTGACATTT 61.527 55.000 19.55 0.00 0.00 2.32
903 1911 1.080569 GGCTGCCGGTTGACATTTG 60.081 57.895 1.35 0.00 0.00 2.32
904 1912 1.659794 GCTGCCGGTTGACATTTGT 59.340 52.632 1.90 0.00 0.00 2.83
905 1913 0.387239 GCTGCCGGTTGACATTTGTC 60.387 55.000 1.90 3.72 44.97 3.18
916 1924 2.801063 GACATTTGTCAATGCCATCGG 58.199 47.619 5.84 0.00 43.39 4.18
917 1925 2.423185 GACATTTGTCAATGCCATCGGA 59.577 45.455 5.84 0.00 43.39 4.55
918 1926 3.025978 ACATTTGTCAATGCCATCGGAT 58.974 40.909 0.00 0.00 43.39 4.18
919 1927 3.181484 ACATTTGTCAATGCCATCGGATG 60.181 43.478 11.07 11.07 43.39 3.51
941 1949 3.736224 CATGGAGGCACCCCAGCT 61.736 66.667 0.00 0.00 41.80 4.24
1037 2045 2.492881 CCATCGATCCATCTCTCCAGAG 59.507 54.545 0.00 0.00 43.36 3.35
1039 2047 3.304911 TCGATCCATCTCTCCAGAGTT 57.695 47.619 3.50 0.00 42.60 3.01
1058 2066 0.315251 TCAGAGACTCCACTGCAACG 59.685 55.000 0.00 0.00 34.57 4.10
1059 2067 0.032678 CAGAGACTCCACTGCAACGT 59.967 55.000 0.00 0.00 0.00 3.99
1060 2068 0.032678 AGAGACTCCACTGCAACGTG 59.967 55.000 0.00 0.00 34.71 4.49
1061 2069 1.560860 GAGACTCCACTGCAACGTGC 61.561 60.000 0.62 0.00 45.29 5.34
1070 2078 3.595758 GCAACGTGCAACCCAGCT 61.596 61.111 0.00 0.00 44.26 4.24
1071 2079 2.639286 CAACGTGCAACCCAGCTC 59.361 61.111 0.00 0.00 34.99 4.09
1088 2096 1.879796 GCTCGATCCCCATTGATCCAC 60.880 57.143 0.00 0.00 38.32 4.02
1095 2103 1.216064 CCCATTGATCCACCTCTCCA 58.784 55.000 0.00 0.00 0.00 3.86
1096 2104 1.133976 CCCATTGATCCACCTCTCCAC 60.134 57.143 0.00 0.00 0.00 4.02
1336 2344 2.080286 TAGCCTTCGCAGTCTTCAAC 57.920 50.000 0.00 0.00 37.52 3.18
1382 2390 1.678627 CGATGCTAGCTACTCAGGTGT 59.321 52.381 17.23 0.00 33.61 4.16
1393 2401 0.946221 CTCAGGTGTCCGTGCAACTC 60.946 60.000 0.00 0.00 33.52 3.01
1444 2452 2.026301 CGAGAAGATCGCCGGGTC 59.974 66.667 2.18 0.00 45.98 4.46
1588 2599 3.740397 TACCGCCACGTCCACTCG 61.740 66.667 0.00 0.00 0.00 4.18
1973 2984 1.497991 CGTGCCGTTGAAGAAGAAGA 58.502 50.000 0.00 0.00 0.00 2.87
1974 2985 1.864711 CGTGCCGTTGAAGAAGAAGAA 59.135 47.619 0.00 0.00 0.00 2.52
1979 2990 3.187432 GCCGTTGAAGAAGAAGAAGAAGG 59.813 47.826 0.00 0.00 0.00 3.46
2040 3069 0.531974 GGAGCGTGAGTCAACCACAA 60.532 55.000 0.00 0.00 34.36 3.33
2050 3079 1.873591 GTCAACCACAACACTAGGCAG 59.126 52.381 0.00 0.00 0.00 4.85
2064 3093 0.106015 AGGCAGGCACCTTTTCAGTT 60.106 50.000 0.00 0.00 36.28 3.16
2067 3096 0.746063 CAGGCACCTTTTCAGTTGCA 59.254 50.000 0.00 0.00 0.00 4.08
2080 3109 3.959293 TCAGTTGCAAGGATCATGTCAT 58.041 40.909 0.00 0.00 0.00 3.06
2081 3110 4.338012 TCAGTTGCAAGGATCATGTCATT 58.662 39.130 0.00 0.00 0.00 2.57
2092 3129 6.294473 AGGATCATGTCATTATGTCAAGTCC 58.706 40.000 0.00 10.52 0.00 3.85
2105 3142 1.299620 AAGTCCGTCAACGTCCGTG 60.300 57.895 1.48 0.00 37.74 4.94
2114 3151 3.423571 GTCAACGTCCGTGTGATAGTAG 58.576 50.000 0.00 0.00 0.00 2.57
2115 3152 3.076621 TCAACGTCCGTGTGATAGTAGT 58.923 45.455 0.00 0.00 0.00 2.73
2116 3153 4.093408 GTCAACGTCCGTGTGATAGTAGTA 59.907 45.833 0.00 0.00 0.00 1.82
2117 3154 4.330894 TCAACGTCCGTGTGATAGTAGTAG 59.669 45.833 0.00 0.00 0.00 2.57
2118 3155 3.866651 ACGTCCGTGTGATAGTAGTAGT 58.133 45.455 0.00 0.00 0.00 2.73
2119 3156 5.011090 ACGTCCGTGTGATAGTAGTAGTA 57.989 43.478 0.00 0.00 0.00 1.82
2120 3157 5.419542 ACGTCCGTGTGATAGTAGTAGTAA 58.580 41.667 0.00 0.00 0.00 2.24
2121 3158 5.521735 ACGTCCGTGTGATAGTAGTAGTAAG 59.478 44.000 0.00 0.00 0.00 2.34
2122 3159 5.521735 CGTCCGTGTGATAGTAGTAGTAAGT 59.478 44.000 0.00 0.00 0.00 2.24
2134 3171 4.017380 AGTAGTAAGTGCTCGTGAATCG 57.983 45.455 0.00 0.00 41.41 3.34
2138 3175 1.419374 AAGTGCTCGTGAATCGTGAC 58.581 50.000 0.00 0.00 40.80 3.67
2161 3198 2.145536 GGACCGGTTTGTAACAACGAT 58.854 47.619 9.42 0.00 0.00 3.73
2167 3204 5.296531 ACCGGTTTGTAACAACGATTACTTT 59.703 36.000 0.00 0.00 36.25 2.66
2168 3205 6.183360 ACCGGTTTGTAACAACGATTACTTTT 60.183 34.615 0.00 0.00 36.25 2.27
2169 3206 6.141053 CCGGTTTGTAACAACGATTACTTTTG 59.859 38.462 0.00 0.00 36.25 2.44
2170 3207 6.687958 CGGTTTGTAACAACGATTACTTTTGT 59.312 34.615 0.00 0.00 36.25 2.83
2171 3208 7.097329 CGGTTTGTAACAACGATTACTTTTGTC 60.097 37.037 0.00 0.00 36.25 3.18
2172 3209 7.911727 GGTTTGTAACAACGATTACTTTTGTCT 59.088 33.333 0.00 0.00 36.25 3.41
2173 3210 8.730427 GTTTGTAACAACGATTACTTTTGTCTG 58.270 33.333 0.00 0.00 36.25 3.51
2174 3211 7.542534 TGTAACAACGATTACTTTTGTCTGT 57.457 32.000 0.00 0.00 36.25 3.41
2175 3212 7.623770 TGTAACAACGATTACTTTTGTCTGTC 58.376 34.615 0.00 0.00 36.25 3.51
2176 3213 6.920569 AACAACGATTACTTTTGTCTGTCT 57.079 33.333 0.00 0.00 32.24 3.41
2177 3214 6.526566 ACAACGATTACTTTTGTCTGTCTC 57.473 37.500 0.00 0.00 0.00 3.36
2178 3215 6.281405 ACAACGATTACTTTTGTCTGTCTCT 58.719 36.000 0.00 0.00 0.00 3.10
2179 3216 6.421202 ACAACGATTACTTTTGTCTGTCTCTC 59.579 38.462 0.00 0.00 0.00 3.20
2180 3217 6.085555 ACGATTACTTTTGTCTGTCTCTCA 57.914 37.500 0.00 0.00 0.00 3.27
2181 3218 6.153067 ACGATTACTTTTGTCTGTCTCTCAG 58.847 40.000 0.00 0.00 44.85 3.35
2182 3219 5.574830 CGATTACTTTTGTCTGTCTCTCAGG 59.425 44.000 0.00 0.00 43.76 3.86
2183 3220 6.570571 CGATTACTTTTGTCTGTCTCTCAGGA 60.571 42.308 0.00 0.00 43.76 3.86
2184 3221 4.599047 ACTTTTGTCTGTCTCTCAGGAG 57.401 45.455 0.00 0.00 43.76 3.69
2185 3222 3.964031 ACTTTTGTCTGTCTCTCAGGAGT 59.036 43.478 0.00 0.00 43.76 3.85
2186 3223 5.141182 ACTTTTGTCTGTCTCTCAGGAGTA 58.859 41.667 0.00 0.00 43.76 2.59
2187 3224 5.010213 ACTTTTGTCTGTCTCTCAGGAGTAC 59.990 44.000 0.00 0.00 43.76 2.73
2188 3225 4.374689 TTGTCTGTCTCTCAGGAGTACT 57.625 45.455 0.00 0.00 43.76 2.73
2189 3226 3.945346 TGTCTGTCTCTCAGGAGTACTC 58.055 50.000 14.87 14.87 43.76 2.59
2203 3240 3.589988 GAGTACTCCAGTTGTGATGTGG 58.410 50.000 12.13 0.00 0.00 4.17
2232 3269 1.063649 CGATCCCGACCGTGTGTAG 59.936 63.158 0.00 0.00 38.22 2.74
2235 3272 1.064654 GATCCCGACCGTGTGTAGTAC 59.935 57.143 0.00 0.00 0.00 2.73
2236 3273 0.036732 TCCCGACCGTGTGTAGTACT 59.963 55.000 0.00 0.00 0.00 2.73
2238 3275 2.083774 CCCGACCGTGTGTAGTACTAA 58.916 52.381 3.61 0.00 0.00 2.24
2261 3304 5.937975 ATTATGGCAGCCAATTAGTGTTT 57.062 34.783 20.84 0.03 36.95 2.83
2264 3307 5.937975 ATGGCAGCCAATTAGTGTTTATT 57.062 34.783 20.84 0.00 36.95 1.40
2266 3309 7.601705 ATGGCAGCCAATTAGTGTTTATTAT 57.398 32.000 20.84 0.00 36.95 1.28
2267 3310 7.416964 TGGCAGCCAATTAGTGTTTATTATT 57.583 32.000 13.33 0.00 0.00 1.40
2268 3311 7.264221 TGGCAGCCAATTAGTGTTTATTATTG 58.736 34.615 13.33 0.00 0.00 1.90
2269 3312 7.093552 TGGCAGCCAATTAGTGTTTATTATTGT 60.094 33.333 13.33 0.00 0.00 2.71
2270 3313 7.435192 GGCAGCCAATTAGTGTTTATTATTGTC 59.565 37.037 6.55 0.00 0.00 3.18
2305 3348 4.788521 GCAAATGATAAATCCCGAACGACC 60.789 45.833 0.00 0.00 0.00 4.79
2319 3362 1.024579 ACGACCGGATTTGCCATGAC 61.025 55.000 9.46 0.00 35.94 3.06
2329 3372 2.610219 TTGCCATGACAAATCGAACG 57.390 45.000 0.00 0.00 0.00 3.95
2367 3410 6.998074 ACTTTAGTTGACATGAGGATGACAAA 59.002 34.615 0.00 0.00 43.01 2.83
2430 3474 4.651994 CAGGACGAAATTGTCATGCTTAC 58.348 43.478 2.81 0.00 42.74 2.34
2439 3483 7.060633 CGAAATTGTCATGCTTACCAACTAAAC 59.939 37.037 0.00 0.00 0.00 2.01
2443 3487 5.825679 TGTCATGCTTACCAACTAAACTTGT 59.174 36.000 0.00 0.00 0.00 3.16
2452 3496 4.104102 ACCAACTAAACTTGTCATCCCTCA 59.896 41.667 0.00 0.00 0.00 3.86
2453 3497 4.455877 CCAACTAAACTTGTCATCCCTCAC 59.544 45.833 0.00 0.00 0.00 3.51
2454 3498 4.974645 ACTAAACTTGTCATCCCTCACA 57.025 40.909 0.00 0.00 0.00 3.58
2489 3533 2.977169 ACAAAAATCGTTCGATTTGCCG 59.023 40.909 26.20 20.32 42.04 5.69
2494 3538 2.030401 CGTTCGATTTGCCGTGGGA 61.030 57.895 0.00 0.00 0.00 4.37
2511 3555 1.379527 GGAAAATCCCGAGCATTCGT 58.620 50.000 0.00 0.00 45.28 3.85
2513 3557 1.064060 GAAAATCCCGAGCATTCGTGG 59.936 52.381 0.00 0.00 45.28 4.94
2523 3567 1.564622 CATTCGTGGCTTATCGGCG 59.435 57.895 0.00 0.00 42.02 6.46
2525 3569 0.874607 ATTCGTGGCTTATCGGCGTC 60.875 55.000 6.85 0.00 42.02 5.19
2533 3578 2.540973 GGCTTATCGGCGTCCAAATTTC 60.541 50.000 6.85 0.00 0.00 2.17
2535 3580 3.546218 GCTTATCGGCGTCCAAATTTCTC 60.546 47.826 6.85 0.00 0.00 2.87
2543 3588 4.933400 GGCGTCCAAATTTCTCTAGTGTTA 59.067 41.667 0.00 0.00 0.00 2.41
2562 3607 8.647143 AGTGTTAATTATGCATATGTTTTGGC 57.353 30.769 7.36 0.00 0.00 4.52
2563 3608 8.477256 AGTGTTAATTATGCATATGTTTTGGCT 58.523 29.630 7.36 0.00 0.00 4.75
2564 3609 8.542132 GTGTTAATTATGCATATGTTTTGGCTG 58.458 33.333 7.36 0.00 0.00 4.85
2566 3611 2.607631 ATGCATATGTTTTGGCTGCC 57.392 45.000 12.87 12.87 31.89 4.85
2567 3612 0.173029 TGCATATGTTTTGGCTGCCG 59.827 50.000 14.98 0.00 31.89 5.69
2568 3613 0.173255 GCATATGTTTTGGCTGCCGT 59.827 50.000 14.98 0.00 0.00 5.68
2569 3614 1.403679 GCATATGTTTTGGCTGCCGTA 59.596 47.619 14.98 1.16 0.00 4.02
2624 3669 7.092716 GCTATTCTTTGTGGTCAAATGACAAT 58.907 34.615 14.93 6.97 46.47 2.71
2626 3671 5.107109 TCTTTGTGGTCAAATGACAATCG 57.893 39.130 14.93 0.00 46.47 3.34
2639 3684 1.678627 GACAATCGAGGAGCTCTAGCA 59.321 52.381 14.64 0.00 45.16 3.49
2672 3719 5.234116 GCTACCTTTTGTCAACCAACATTTG 59.766 40.000 0.00 0.00 31.20 2.32
2675 3722 4.635324 CCTTTTGTCAACCAACATTTGCTT 59.365 37.500 0.00 0.00 31.20 3.91
2693 3740 3.936585 TTTTTCACGAGCCTTGCAC 57.063 47.368 0.00 0.00 0.00 4.57
2694 3741 1.098869 TTTTTCACGAGCCTTGCACA 58.901 45.000 0.00 0.00 0.00 4.57
2695 3742 0.380378 TTTTCACGAGCCTTGCACAC 59.620 50.000 0.00 0.00 0.00 3.82
2696 3743 1.444119 TTTCACGAGCCTTGCACACC 61.444 55.000 0.00 0.00 0.00 4.16
2697 3744 2.591429 CACGAGCCTTGCACACCA 60.591 61.111 0.00 0.00 0.00 4.17
2698 3745 2.281070 ACGAGCCTTGCACACCAG 60.281 61.111 0.00 0.00 0.00 4.00
2699 3746 2.031012 CGAGCCTTGCACACCAGA 59.969 61.111 0.00 0.00 0.00 3.86
2700 3747 1.376424 CGAGCCTTGCACACCAGAT 60.376 57.895 0.00 0.00 0.00 2.90
2701 3748 1.364626 CGAGCCTTGCACACCAGATC 61.365 60.000 0.00 0.00 0.00 2.75
2702 3749 0.321919 GAGCCTTGCACACCAGATCA 60.322 55.000 0.00 0.00 0.00 2.92
2703 3750 0.330604 AGCCTTGCACACCAGATCAT 59.669 50.000 0.00 0.00 0.00 2.45
2704 3751 0.737219 GCCTTGCACACCAGATCATC 59.263 55.000 0.00 0.00 0.00 2.92
2705 3752 1.386533 CCTTGCACACCAGATCATCC 58.613 55.000 0.00 0.00 0.00 3.51
2706 3753 1.064906 CCTTGCACACCAGATCATCCT 60.065 52.381 0.00 0.00 0.00 3.24
2707 3754 2.014857 CTTGCACACCAGATCATCCTG 58.985 52.381 0.00 0.00 0.00 3.86
2708 3755 1.278537 TGCACACCAGATCATCCTGA 58.721 50.000 0.00 0.00 36.29 3.86
2709 3756 1.208776 TGCACACCAGATCATCCTGAG 59.791 52.381 0.00 0.00 36.29 3.35
2710 3757 1.209019 GCACACCAGATCATCCTGAGT 59.791 52.381 0.00 0.00 36.29 3.41
2711 3758 2.902523 CACACCAGATCATCCTGAGTG 58.097 52.381 0.00 0.00 39.27 3.51
2712 3759 1.209019 ACACCAGATCATCCTGAGTGC 59.791 52.381 0.00 0.00 38.11 4.40
2713 3760 0.835941 ACCAGATCATCCTGAGTGCC 59.164 55.000 0.00 0.00 36.29 5.01
2714 3761 0.835276 CCAGATCATCCTGAGTGCCA 59.165 55.000 0.00 0.00 36.29 4.92
2715 3762 1.211212 CCAGATCATCCTGAGTGCCAA 59.789 52.381 0.00 0.00 36.29 4.52
2716 3763 2.356432 CCAGATCATCCTGAGTGCCAAA 60.356 50.000 0.00 0.00 36.29 3.28
2717 3764 3.349927 CAGATCATCCTGAGTGCCAAAA 58.650 45.455 0.00 0.00 36.29 2.44
2718 3765 3.760151 CAGATCATCCTGAGTGCCAAAAA 59.240 43.478 0.00 0.00 36.29 1.94
2775 3822 9.483916 TTGTTTCGAATTTACTGTTCATCTAGA 57.516 29.630 0.00 0.00 0.00 2.43
2776 3823 9.140286 TGTTTCGAATTTACTGTTCATCTAGAG 57.860 33.333 0.00 0.00 0.00 2.43
2777 3824 7.757097 TTCGAATTTACTGTTCATCTAGAGC 57.243 36.000 0.00 0.00 0.00 4.09
2778 3825 6.863275 TCGAATTTACTGTTCATCTAGAGCA 58.137 36.000 0.00 0.00 36.00 4.26
2779 3826 7.492524 TCGAATTTACTGTTCATCTAGAGCAT 58.507 34.615 0.00 0.00 36.83 3.79
2780 3827 8.630037 TCGAATTTACTGTTCATCTAGAGCATA 58.370 33.333 0.00 0.00 36.83 3.14
2781 3828 9.416794 CGAATTTACTGTTCATCTAGAGCATAT 57.583 33.333 0.00 0.00 36.83 1.78
2809 3856 2.649531 TTTTCCCAAAAGCTCCTCGA 57.350 45.000 0.00 0.00 0.00 4.04
2810 3857 2.185004 TTTCCCAAAAGCTCCTCGAG 57.815 50.000 5.13 5.13 0.00 4.04
2811 3858 1.056660 TTCCCAAAAGCTCCTCGAGT 58.943 50.000 12.31 0.00 31.39 4.18
2812 3859 0.321671 TCCCAAAAGCTCCTCGAGTG 59.678 55.000 12.31 4.99 31.39 3.51
2813 3860 0.035458 CCCAAAAGCTCCTCGAGTGT 59.965 55.000 12.31 0.00 31.39 3.55
2814 3861 1.433534 CCAAAAGCTCCTCGAGTGTC 58.566 55.000 12.31 0.00 31.39 3.67
2815 3862 1.433534 CAAAAGCTCCTCGAGTGTCC 58.566 55.000 12.31 0.00 31.39 4.02
2816 3863 1.048601 AAAAGCTCCTCGAGTGTCCA 58.951 50.000 12.31 0.00 31.39 4.02
2817 3864 1.048601 AAAGCTCCTCGAGTGTCCAA 58.951 50.000 12.31 0.00 31.39 3.53
2818 3865 1.048601 AAGCTCCTCGAGTGTCCAAA 58.951 50.000 12.31 0.00 31.39 3.28
2819 3866 0.318762 AGCTCCTCGAGTGTCCAAAC 59.681 55.000 12.31 0.00 31.39 2.93
2820 3867 0.033504 GCTCCTCGAGTGTCCAAACA 59.966 55.000 12.31 0.00 31.39 2.83
2821 3868 1.338200 GCTCCTCGAGTGTCCAAACAT 60.338 52.381 12.31 0.00 37.81 2.71
2822 3869 2.611518 CTCCTCGAGTGTCCAAACATC 58.388 52.381 12.31 0.00 37.81 3.06
2823 3870 1.967779 TCCTCGAGTGTCCAAACATCA 59.032 47.619 12.31 0.00 37.81 3.07
2824 3871 2.069273 CCTCGAGTGTCCAAACATCAC 58.931 52.381 12.31 0.00 37.81 3.06
2825 3872 2.547855 CCTCGAGTGTCCAAACATCACA 60.548 50.000 12.31 0.00 37.81 3.58
2826 3873 3.130633 CTCGAGTGTCCAAACATCACAA 58.869 45.455 3.62 0.00 37.81 3.33
2827 3874 3.536570 TCGAGTGTCCAAACATCACAAA 58.463 40.909 0.00 0.00 37.81 2.83
2828 3875 3.942115 TCGAGTGTCCAAACATCACAAAA 59.058 39.130 0.00 0.00 37.81 2.44
2829 3876 4.578516 TCGAGTGTCCAAACATCACAAAAT 59.421 37.500 0.00 0.00 37.81 1.82
2830 3877 5.067153 TCGAGTGTCCAAACATCACAAAATT 59.933 36.000 0.00 0.00 37.81 1.82
2831 3878 5.748152 CGAGTGTCCAAACATCACAAAATTT 59.252 36.000 0.00 0.00 37.81 1.82
2832 3879 6.255453 CGAGTGTCCAAACATCACAAAATTTT 59.745 34.615 0.00 0.00 37.81 1.82
2833 3880 7.433719 CGAGTGTCCAAACATCACAAAATTTTA 59.566 33.333 2.44 0.00 37.81 1.52
2834 3881 8.419076 AGTGTCCAAACATCACAAAATTTTAC 57.581 30.769 2.44 0.00 37.81 2.01
2835 3882 8.037758 AGTGTCCAAACATCACAAAATTTTACA 58.962 29.630 2.44 0.00 37.81 2.41
2836 3883 8.825745 GTGTCCAAACATCACAAAATTTTACAT 58.174 29.630 2.44 0.00 37.81 2.29
2837 3884 8.824781 TGTCCAAACATCACAAAATTTTACATG 58.175 29.630 2.44 8.39 0.00 3.21
2838 3885 8.281893 GTCCAAACATCACAAAATTTTACATGG 58.718 33.333 2.44 4.65 0.00 3.66
2839 3886 8.206867 TCCAAACATCACAAAATTTTACATGGA 58.793 29.630 2.44 6.66 0.00 3.41
2840 3887 9.001542 CCAAACATCACAAAATTTTACATGGAT 57.998 29.630 2.44 0.50 0.00 3.41
2843 3890 8.991243 ACATCACAAAATTTTACATGGATCTG 57.009 30.769 2.44 3.03 0.00 2.90
2844 3891 8.587608 ACATCACAAAATTTTACATGGATCTGT 58.412 29.630 2.44 0.00 0.00 3.41
2845 3892 8.865978 CATCACAAAATTTTACATGGATCTGTG 58.134 33.333 2.44 4.72 33.44 3.66
2846 3893 7.950512 TCACAAAATTTTACATGGATCTGTGT 58.049 30.769 2.44 8.25 33.78 3.72
2847 3894 9.072375 TCACAAAATTTTACATGGATCTGTGTA 57.928 29.630 2.44 6.63 33.78 2.90
2848 3895 9.859427 CACAAAATTTTACATGGATCTGTGTAT 57.141 29.630 2.44 0.00 31.48 2.29
2853 3900 9.874205 AATTTTACATGGATCTGTGTATTTTGG 57.126 29.630 10.21 0.00 31.48 3.28
2854 3901 8.642935 TTTTACATGGATCTGTGTATTTTGGA 57.357 30.769 10.21 0.00 31.48 3.53
2855 3902 8.821686 TTTACATGGATCTGTGTATTTTGGAT 57.178 30.769 10.21 0.00 31.48 3.41
2856 3903 6.704289 ACATGGATCTGTGTATTTTGGATG 57.296 37.500 0.00 0.00 0.00 3.51
2857 3904 5.068198 ACATGGATCTGTGTATTTTGGATGC 59.932 40.000 0.00 0.00 0.00 3.91
2858 3905 3.953612 TGGATCTGTGTATTTTGGATGCC 59.046 43.478 0.00 0.00 0.00 4.40
2859 3906 3.953612 GGATCTGTGTATTTTGGATGCCA 59.046 43.478 0.00 0.00 0.00 4.92
2860 3907 4.402155 GGATCTGTGTATTTTGGATGCCAA 59.598 41.667 0.00 0.00 42.29 4.52
2921 3968 7.456684 TTTTCATCAAACACAATTTACGTGG 57.543 32.000 0.00 0.00 38.74 4.94
2922 3969 5.114785 TCATCAAACACAATTTACGTGGG 57.885 39.130 0.00 0.00 38.74 4.61
2923 3970 3.992260 TCAAACACAATTTACGTGGGG 57.008 42.857 0.00 0.00 38.74 4.96
2924 3971 2.623889 TCAAACACAATTTACGTGGGGG 59.376 45.455 0.00 0.00 38.74 5.40
2925 3972 2.362717 CAAACACAATTTACGTGGGGGT 59.637 45.455 0.00 0.00 38.74 4.95
2926 3973 1.900245 ACACAATTTACGTGGGGGTC 58.100 50.000 0.00 0.00 38.74 4.46
2927 3974 1.143277 ACACAATTTACGTGGGGGTCA 59.857 47.619 0.00 0.00 38.74 4.02
2928 3975 2.231529 CACAATTTACGTGGGGGTCAA 58.768 47.619 0.00 0.00 0.00 3.18
2929 3976 2.623889 CACAATTTACGTGGGGGTCAAA 59.376 45.455 0.00 0.00 0.00 2.69
2930 3977 2.624364 ACAATTTACGTGGGGGTCAAAC 59.376 45.455 0.00 0.00 0.00 2.93
2931 3978 1.913778 ATTTACGTGGGGGTCAAACC 58.086 50.000 0.00 0.00 37.60 3.27
2940 3987 3.336566 GGTCAAACCCGGTCAACG 58.663 61.111 0.00 0.00 43.80 4.10
2941 3988 1.524393 GGTCAAACCCGGTCAACGT 60.524 57.895 0.00 0.00 42.24 3.99
2942 3989 1.644913 GTCAAACCCGGTCAACGTG 59.355 57.895 0.00 0.00 42.24 4.49
2943 3990 1.091197 GTCAAACCCGGTCAACGTGT 61.091 55.000 0.00 0.00 42.24 4.49
2944 3991 0.392729 TCAAACCCGGTCAACGTGTT 60.393 50.000 0.00 0.00 45.00 3.32
2945 3992 2.871021 AAACCCGGTCAACGTGTTT 58.129 47.368 0.00 0.00 45.91 2.83
2946 3993 3.776616 AACCCGGTCAACGTGTTTA 57.223 47.368 0.00 0.00 40.23 2.01
2947 3994 1.585297 AACCCGGTCAACGTGTTTAG 58.415 50.000 0.00 0.00 40.23 1.85
2948 3995 0.752054 ACCCGGTCAACGTGTTTAGA 59.248 50.000 0.00 0.00 42.24 2.10
2949 3996 1.138661 ACCCGGTCAACGTGTTTAGAA 59.861 47.619 0.00 0.00 42.24 2.10
2950 3997 2.224354 ACCCGGTCAACGTGTTTAGAAT 60.224 45.455 0.00 0.00 42.24 2.40
2951 3998 2.414138 CCCGGTCAACGTGTTTAGAATC 59.586 50.000 0.00 0.00 42.24 2.52
2952 3999 3.323243 CCGGTCAACGTGTTTAGAATCT 58.677 45.455 0.00 0.00 42.24 2.40
2953 4000 3.122948 CCGGTCAACGTGTTTAGAATCTG 59.877 47.826 0.00 0.00 42.24 2.90
2954 4001 3.122948 CGGTCAACGTGTTTAGAATCTGG 59.877 47.826 0.00 0.00 37.93 3.86
2955 4002 4.062991 GGTCAACGTGTTTAGAATCTGGT 58.937 43.478 0.00 0.00 0.00 4.00
2956 4003 4.514066 GGTCAACGTGTTTAGAATCTGGTT 59.486 41.667 0.00 0.00 0.00 3.67
2957 4004 5.008316 GGTCAACGTGTTTAGAATCTGGTTT 59.992 40.000 0.00 0.00 0.00 3.27
2958 4005 6.459161 GGTCAACGTGTTTAGAATCTGGTTTT 60.459 38.462 0.00 0.00 0.00 2.43
2959 4006 6.413818 GTCAACGTGTTTAGAATCTGGTTTTG 59.586 38.462 0.00 0.00 0.00 2.44
2960 4007 5.432885 ACGTGTTTAGAATCTGGTTTTGG 57.567 39.130 0.00 0.00 0.00 3.28
2961 4008 4.277423 ACGTGTTTAGAATCTGGTTTTGGG 59.723 41.667 0.00 0.00 0.00 4.12
2962 4009 4.556233 GTGTTTAGAATCTGGTTTTGGGC 58.444 43.478 0.00 0.00 0.00 5.36
2963 4010 3.576550 TGTTTAGAATCTGGTTTTGGGCC 59.423 43.478 0.00 0.00 0.00 5.80
2964 4011 3.534357 TTAGAATCTGGTTTTGGGCCA 57.466 42.857 0.00 0.00 34.42 5.36
2965 4012 2.397044 AGAATCTGGTTTTGGGCCAA 57.603 45.000 16.66 16.66 35.32 4.52
2966 4013 2.688477 AGAATCTGGTTTTGGGCCAAA 58.312 42.857 27.28 27.28 35.32 3.28
2967 4014 2.368548 AGAATCTGGTTTTGGGCCAAAC 59.631 45.455 30.49 23.01 35.32 2.93
2968 4015 2.101640 ATCTGGTTTTGGGCCAAACT 57.898 45.000 30.49 9.03 35.32 2.66
2969 4016 1.872773 TCTGGTTTTGGGCCAAACTT 58.127 45.000 30.49 0.00 35.32 2.66
2970 4017 3.033659 TCTGGTTTTGGGCCAAACTTA 57.966 42.857 30.49 14.41 35.32 2.24
2971 4018 2.696187 TCTGGTTTTGGGCCAAACTTAC 59.304 45.455 30.49 24.26 35.32 2.34
2972 4019 1.763545 TGGTTTTGGGCCAAACTTACC 59.236 47.619 31.25 31.25 34.32 2.85
2973 4020 1.071071 GGTTTTGGGCCAAACTTACCC 59.929 52.381 29.23 20.75 44.52 3.69
2976 4023 2.437449 GGGCCAAACTTACCCGGT 59.563 61.111 4.39 0.00 32.92 5.28
2977 4024 1.228644 GGGCCAAACTTACCCGGTT 60.229 57.895 4.39 0.00 32.92 4.44
2978 4025 0.828762 GGGCCAAACTTACCCGGTTT 60.829 55.000 4.39 0.00 37.37 3.27
2979 4026 1.042229 GGCCAAACTTACCCGGTTTT 58.958 50.000 0.00 0.00 35.09 2.43
2980 4027 2.237643 GGCCAAACTTACCCGGTTTTA 58.762 47.619 0.00 0.00 35.09 1.52
2981 4028 2.627221 GGCCAAACTTACCCGGTTTTAA 59.373 45.455 0.00 0.00 35.09 1.52
2982 4029 3.552684 GGCCAAACTTACCCGGTTTTAAC 60.553 47.826 0.00 0.00 35.09 2.01
2983 4030 3.067883 GCCAAACTTACCCGGTTTTAACA 59.932 43.478 0.00 0.00 35.09 2.41
2984 4031 4.609947 CCAAACTTACCCGGTTTTAACAC 58.390 43.478 0.00 0.00 35.09 3.32
2985 4032 4.338964 CCAAACTTACCCGGTTTTAACACT 59.661 41.667 0.00 0.00 35.09 3.55
2986 4033 5.163530 CCAAACTTACCCGGTTTTAACACTT 60.164 40.000 0.00 0.00 35.09 3.16
2987 4034 5.503662 AACTTACCCGGTTTTAACACTTG 57.496 39.130 0.00 0.00 0.00 3.16
2988 4035 4.779696 ACTTACCCGGTTTTAACACTTGA 58.220 39.130 0.00 0.00 0.00 3.02
2989 4036 5.192176 ACTTACCCGGTTTTAACACTTGAA 58.808 37.500 0.00 0.00 0.00 2.69
2990 4037 5.297527 ACTTACCCGGTTTTAACACTTGAAG 59.702 40.000 0.00 0.00 0.00 3.02
2991 4038 2.953648 ACCCGGTTTTAACACTTGAAGG 59.046 45.455 0.00 0.00 0.00 3.46
2992 4039 3.215975 CCCGGTTTTAACACTTGAAGGA 58.784 45.455 0.00 0.00 0.00 3.36
2993 4040 3.004002 CCCGGTTTTAACACTTGAAGGAC 59.996 47.826 0.00 0.00 0.00 3.85
2994 4041 3.004002 CCGGTTTTAACACTTGAAGGACC 59.996 47.826 0.00 0.00 0.00 4.46
2995 4042 3.628487 CGGTTTTAACACTTGAAGGACCA 59.372 43.478 0.00 0.00 0.00 4.02
2996 4043 4.096682 CGGTTTTAACACTTGAAGGACCAA 59.903 41.667 0.00 0.00 0.00 3.67
2997 4044 5.393243 CGGTTTTAACACTTGAAGGACCAAA 60.393 40.000 0.00 0.00 0.00 3.28
2998 4045 6.578944 GGTTTTAACACTTGAAGGACCAAAT 58.421 36.000 0.00 0.00 0.00 2.32
2999 4046 6.478673 GGTTTTAACACTTGAAGGACCAAATG 59.521 38.462 0.00 0.00 30.50 2.32
3000 4047 6.783708 TTTAACACTTGAAGGACCAAATGT 57.216 33.333 0.00 0.00 38.00 2.71
3001 4048 4.918810 AACACTTGAAGGACCAAATGTC 57.081 40.909 0.00 0.00 35.74 3.06
3002 4049 4.170468 ACACTTGAAGGACCAAATGTCT 57.830 40.909 0.00 0.00 43.89 3.41
3003 4050 5.304686 ACACTTGAAGGACCAAATGTCTA 57.695 39.130 0.00 0.00 43.89 2.59
3004 4051 5.063880 ACACTTGAAGGACCAAATGTCTAC 58.936 41.667 0.00 0.00 43.89 2.59
3005 4052 4.455877 CACTTGAAGGACCAAATGTCTACC 59.544 45.833 0.00 0.00 43.89 3.18
3006 4053 4.104102 ACTTGAAGGACCAAATGTCTACCA 59.896 41.667 0.00 0.00 43.89 3.25
3007 4054 4.015872 TGAAGGACCAAATGTCTACCAC 57.984 45.455 0.00 0.00 43.89 4.16
3008 4055 3.392947 TGAAGGACCAAATGTCTACCACA 59.607 43.478 0.00 0.00 43.89 4.17
3009 4056 4.141367 TGAAGGACCAAATGTCTACCACAA 60.141 41.667 0.00 0.00 43.89 3.33
3010 4057 4.447138 AGGACCAAATGTCTACCACAAA 57.553 40.909 0.00 0.00 43.89 2.83
3011 4058 4.798882 AGGACCAAATGTCTACCACAAAA 58.201 39.130 0.00 0.00 43.89 2.44
3012 4059 5.393866 AGGACCAAATGTCTACCACAAAAT 58.606 37.500 0.00 0.00 43.89 1.82
3013 4060 5.476945 AGGACCAAATGTCTACCACAAAATC 59.523 40.000 0.00 0.00 43.89 2.17
3014 4061 5.476945 GGACCAAATGTCTACCACAAAATCT 59.523 40.000 0.00 0.00 43.89 2.40
3015 4062 6.015434 GGACCAAATGTCTACCACAAAATCTT 60.015 38.462 0.00 0.00 43.89 2.40
3016 4063 6.748132 ACCAAATGTCTACCACAAAATCTTG 58.252 36.000 0.00 0.00 38.97 3.02
3017 4064 6.549364 ACCAAATGTCTACCACAAAATCTTGA 59.451 34.615 0.00 0.00 38.97 3.02
3018 4065 7.069331 ACCAAATGTCTACCACAAAATCTTGAA 59.931 33.333 0.00 0.00 38.97 2.69
3019 4066 7.596248 CCAAATGTCTACCACAAAATCTTGAAG 59.404 37.037 0.00 0.00 38.97 3.02
3020 4067 6.824305 ATGTCTACCACAAAATCTTGAAGG 57.176 37.500 0.00 0.00 38.97 3.46
3021 4068 5.070001 TGTCTACCACAAAATCTTGAAGGG 58.930 41.667 0.00 0.00 36.33 3.95
3022 4069 4.079253 TCTACCACAAAATCTTGAAGGGC 58.921 43.478 0.00 0.00 36.33 5.19
3023 4070 1.970640 ACCACAAAATCTTGAAGGGCC 59.029 47.619 0.00 0.00 36.33 5.80
3024 4071 1.969923 CCACAAAATCTTGAAGGGCCA 59.030 47.619 6.18 0.00 36.33 5.36
3025 4072 2.368221 CCACAAAATCTTGAAGGGCCAA 59.632 45.455 6.18 0.00 36.33 4.52
3026 4073 3.555586 CCACAAAATCTTGAAGGGCCAAG 60.556 47.826 6.18 0.06 43.58 3.61
3027 4074 3.070015 CACAAAATCTTGAAGGGCCAAGT 59.930 43.478 6.18 0.00 42.95 3.16
3028 4075 3.321968 ACAAAATCTTGAAGGGCCAAGTC 59.678 43.478 6.18 0.00 42.95 3.01
3029 4076 3.532641 AAATCTTGAAGGGCCAAGTCT 57.467 42.857 6.18 0.00 42.95 3.24
3030 4077 4.657814 AAATCTTGAAGGGCCAAGTCTA 57.342 40.909 6.18 0.00 42.95 2.59
3031 4078 4.870021 AATCTTGAAGGGCCAAGTCTAT 57.130 40.909 6.18 0.00 42.95 1.98
3032 4079 5.975988 AATCTTGAAGGGCCAAGTCTATA 57.024 39.130 6.18 0.00 42.95 1.31
3033 4080 4.755266 TCTTGAAGGGCCAAGTCTATAC 57.245 45.455 6.18 0.00 42.95 1.47
3034 4081 4.362677 TCTTGAAGGGCCAAGTCTATACT 58.637 43.478 6.18 0.00 42.95 2.12
3036 4083 5.250774 TCTTGAAGGGCCAAGTCTATACTTT 59.749 40.000 6.18 0.00 43.60 2.66
3037 4084 5.514500 TGAAGGGCCAAGTCTATACTTTT 57.486 39.130 6.18 0.00 43.60 2.27
3038 4085 5.253330 TGAAGGGCCAAGTCTATACTTTTG 58.747 41.667 6.18 0.00 43.60 2.44
3039 4086 4.236527 AGGGCCAAGTCTATACTTTTGG 57.763 45.455 6.18 0.00 43.60 3.28
3040 4087 3.850173 AGGGCCAAGTCTATACTTTTGGA 59.150 43.478 6.18 0.00 43.60 3.53
3041 4088 4.080299 AGGGCCAAGTCTATACTTTTGGAG 60.080 45.833 6.18 0.00 43.60 3.86
3042 4089 4.080526 GGGCCAAGTCTATACTTTTGGAGA 60.081 45.833 4.39 0.00 43.60 3.71
3043 4090 5.497474 GGCCAAGTCTATACTTTTGGAGAA 58.503 41.667 0.00 0.00 43.60 2.87
3044 4091 5.354513 GGCCAAGTCTATACTTTTGGAGAAC 59.645 44.000 0.00 0.00 43.60 3.01
3045 4092 6.174049 GCCAAGTCTATACTTTTGGAGAACT 58.826 40.000 6.30 0.00 43.60 3.01
3046 4093 6.655425 GCCAAGTCTATACTTTTGGAGAACTT 59.345 38.462 6.30 0.00 43.60 2.66
3047 4094 7.361286 GCCAAGTCTATACTTTTGGAGAACTTG 60.361 40.741 6.30 0.00 43.60 3.16
3048 4095 7.878127 CCAAGTCTATACTTTTGGAGAACTTGA 59.122 37.037 11.75 0.00 43.60 3.02
3049 4096 9.273016 CAAGTCTATACTTTTGGAGAACTTGAA 57.727 33.333 5.69 0.00 43.60 2.69
3050 4097 9.495572 AAGTCTATACTTTTGGAGAACTTGAAG 57.504 33.333 0.00 0.00 43.60 3.02
3051 4098 8.871125 AGTCTATACTTTTGGAGAACTTGAAGA 58.129 33.333 0.00 0.00 29.00 2.87
3052 4099 9.660180 GTCTATACTTTTGGAGAACTTGAAGAT 57.340 33.333 0.00 0.00 0.00 2.40
3053 4100 9.877178 TCTATACTTTTGGAGAACTTGAAGATC 57.123 33.333 0.00 0.00 0.00 2.75
3054 4101 9.658799 CTATACTTTTGGAGAACTTGAAGATCA 57.341 33.333 0.00 0.00 0.00 2.92
3055 4102 8.924511 ATACTTTTGGAGAACTTGAAGATCAA 57.075 30.769 0.00 0.00 34.79 2.57
3056 4103 7.645058 ACTTTTGGAGAACTTGAAGATCAAA 57.355 32.000 0.00 0.00 35.73 2.69
3057 4104 8.066612 ACTTTTGGAGAACTTGAAGATCAAAA 57.933 30.769 0.00 7.28 35.73 2.44
3058 4105 8.531146 ACTTTTGGAGAACTTGAAGATCAAAAA 58.469 29.630 0.00 5.74 35.73 1.94
3059 4106 8.702163 TTTTGGAGAACTTGAAGATCAAAAAC 57.298 30.769 0.00 0.00 35.73 2.43
3060 4107 7.403312 TTGGAGAACTTGAAGATCAAAAACA 57.597 32.000 0.00 0.00 35.73 2.83
3061 4108 7.587037 TGGAGAACTTGAAGATCAAAAACAT 57.413 32.000 0.00 0.00 35.73 2.71
3062 4109 8.690203 TGGAGAACTTGAAGATCAAAAACATA 57.310 30.769 0.00 0.00 35.73 2.29
3063 4110 9.300681 TGGAGAACTTGAAGATCAAAAACATAT 57.699 29.630 0.00 0.00 35.73 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.715713 ACTGGAAGAGGTCTTTAACCAAC 58.284 43.478 0.00 0.00 44.69 3.77
146 148 1.261619 CTCTGACGCACACCAAAAGAC 59.738 52.381 0.00 0.00 0.00 3.01
310 317 6.319152 TGAAGTTTAACTCGATGACCCAAAAA 59.681 34.615 0.00 0.00 0.00 1.94
349 356 2.551887 TGACCAACATGTCGTTTGATGG 59.448 45.455 0.00 3.61 41.41 3.51
423 447 9.667107 CAAGGAACTGGTGTTTCTATAATTCTA 57.333 33.333 0.00 0.00 40.94 2.10
424 448 8.383175 TCAAGGAACTGGTGTTTCTATAATTCT 58.617 33.333 0.00 0.00 40.94 2.40
425 449 8.451748 GTCAAGGAACTGGTGTTTCTATAATTC 58.548 37.037 0.00 0.00 40.94 2.17
426 450 8.164070 AGTCAAGGAACTGGTGTTTCTATAATT 58.836 33.333 0.00 0.00 40.94 1.40
427 451 7.607991 CAGTCAAGGAACTGGTGTTTCTATAAT 59.392 37.037 0.00 0.00 40.94 1.28
428 452 6.934645 CAGTCAAGGAACTGGTGTTTCTATAA 59.065 38.462 0.00 0.00 40.94 0.98
429 453 6.464222 CAGTCAAGGAACTGGTGTTTCTATA 58.536 40.000 0.00 0.00 40.94 1.31
430 454 5.308825 CAGTCAAGGAACTGGTGTTTCTAT 58.691 41.667 0.00 0.00 40.94 1.98
442 466 5.184287 AGACTAGTAAGAGCAGTCAAGGAAC 59.816 44.000 0.00 0.00 40.94 3.62
452 476 6.770746 AAACCGATAAGACTAGTAAGAGCA 57.229 37.500 0.00 0.00 0.00 4.26
457 481 9.866655 TCCCTTATAAACCGATAAGACTAGTAA 57.133 33.333 0.00 0.00 40.46 2.24
467 491 5.078949 TCACCGATCCCTTATAAACCGATA 58.921 41.667 0.00 0.00 0.00 2.92
489 1372 8.983724 GTGGTCTATTATCTAACAGCATCTTTC 58.016 37.037 0.00 0.00 0.00 2.62
534 1417 5.880332 TGCTCTTCTTTTAAACTATGCCGAT 59.120 36.000 0.00 0.00 0.00 4.18
535 1418 5.121768 GTGCTCTTCTTTTAAACTATGCCGA 59.878 40.000 0.00 0.00 0.00 5.54
556 1445 3.557207 CTTGGACACAAGCAAGTGC 57.443 52.632 8.28 0.00 46.67 4.40
592 1482 2.949909 ATTCCGCCGTGCCAGTGTA 61.950 57.895 0.00 0.00 0.00 2.90
612 1589 4.764679 TCAAAGTTTCATCGTGGAATGG 57.235 40.909 0.00 0.00 0.00 3.16
636 1613 8.016801 GGCAAATATTGTTGAATTTTTGAGTGG 58.983 33.333 12.17 0.00 40.32 4.00
722 1707 1.140589 CTCGCGAGAACAGATGCCT 59.859 57.895 32.06 0.00 41.32 4.75
732 1717 2.794621 CTGTAGCTGCTCGCGAGA 59.205 61.111 38.74 21.90 45.59 4.04
744 1729 4.162690 GGGGTCTGGGCGCTGTAG 62.163 72.222 7.64 3.37 0.00 2.74
748 1733 3.696518 TATCTGGGGTCTGGGCGCT 62.697 63.158 7.64 0.00 0.00 5.92
750 1735 1.048724 TTCTATCTGGGGTCTGGGCG 61.049 60.000 0.00 0.00 0.00 6.13
751 1736 0.470341 GTTCTATCTGGGGTCTGGGC 59.530 60.000 0.00 0.00 0.00 5.36
752 1737 1.132500 GGTTCTATCTGGGGTCTGGG 58.868 60.000 0.00 0.00 0.00 4.45
753 1738 1.132500 GGGTTCTATCTGGGGTCTGG 58.868 60.000 0.00 0.00 0.00 3.86
754 1739 1.765314 CTGGGTTCTATCTGGGGTCTG 59.235 57.143 0.00 0.00 0.00 3.51
755 1740 1.972207 GCTGGGTTCTATCTGGGGTCT 60.972 57.143 0.00 0.00 0.00 3.85
757 1742 0.253160 TGCTGGGTTCTATCTGGGGT 60.253 55.000 0.00 0.00 0.00 4.95
787 1791 7.575414 TTATCTAGGTCAGTCATGTTCTCTC 57.425 40.000 0.00 0.00 0.00 3.20
794 1798 5.931146 GCCTTGATTATCTAGGTCAGTCATG 59.069 44.000 20.37 0.00 40.73 3.07
833 1837 1.212751 GCAATCACGGGAGTTTGCC 59.787 57.895 13.84 0.00 45.87 4.52
837 1842 1.067635 GCAAATGCAATCACGGGAGTT 60.068 47.619 0.00 0.00 40.79 3.01
853 1858 0.595588 ATTTGTCGACGGCATGCAAA 59.404 45.000 21.36 9.75 34.25 3.68
901 1909 1.391577 CCATCCGATGGCATTGACAA 58.608 50.000 16.49 1.88 44.70 3.18
902 1910 3.099002 CCATCCGATGGCATTGACA 57.901 52.632 16.49 0.00 44.70 3.58
911 1919 1.001746 CCTCCATGTCTCCATCCGATG 59.998 57.143 0.93 0.93 0.00 3.84
912 1920 1.346062 CCTCCATGTCTCCATCCGAT 58.654 55.000 0.00 0.00 0.00 4.18
913 1921 1.402896 GCCTCCATGTCTCCATCCGA 61.403 60.000 0.00 0.00 0.00 4.55
914 1922 1.070445 GCCTCCATGTCTCCATCCG 59.930 63.158 0.00 0.00 0.00 4.18
915 1923 0.179034 GTGCCTCCATGTCTCCATCC 60.179 60.000 0.00 0.00 0.00 3.51
916 1924 0.179034 GGTGCCTCCATGTCTCCATC 60.179 60.000 0.00 0.00 35.97 3.51
917 1925 1.639635 GGGTGCCTCCATGTCTCCAT 61.640 60.000 0.00 0.00 38.11 3.41
918 1926 2.300967 GGGTGCCTCCATGTCTCCA 61.301 63.158 0.00 0.00 38.11 3.86
919 1927 2.592308 GGGTGCCTCCATGTCTCC 59.408 66.667 0.00 0.00 38.11 3.71
920 1928 2.262774 CTGGGGTGCCTCCATGTCTC 62.263 65.000 0.00 0.00 38.11 3.36
921 1929 2.204136 TGGGGTGCCTCCATGTCT 60.204 61.111 0.00 0.00 38.11 3.41
922 1930 2.273449 CTGGGGTGCCTCCATGTC 59.727 66.667 0.00 0.00 38.11 3.06
923 1931 4.052518 GCTGGGGTGCCTCCATGT 62.053 66.667 0.00 0.00 38.11 3.21
924 1932 3.711059 GAGCTGGGGTGCCTCCATG 62.711 68.421 0.00 0.00 38.11 3.66
925 1933 3.415087 GAGCTGGGGTGCCTCCAT 61.415 66.667 0.00 0.00 38.11 3.41
926 1934 4.980592 TGAGCTGGGGTGCCTCCA 62.981 66.667 0.00 0.00 38.11 3.86
927 1935 4.106925 CTGAGCTGGGGTGCCTCC 62.107 72.222 0.00 0.00 0.00 4.30
928 1936 1.919600 AATCTGAGCTGGGGTGCCTC 61.920 60.000 0.00 0.00 0.00 4.70
929 1937 1.927527 AATCTGAGCTGGGGTGCCT 60.928 57.895 0.00 0.00 0.00 4.75
930 1938 1.751927 CAATCTGAGCTGGGGTGCC 60.752 63.158 0.00 0.00 0.00 5.01
931 1939 0.322816 TTCAATCTGAGCTGGGGTGC 60.323 55.000 0.00 0.00 0.00 5.01
932 1940 1.004044 ACTTCAATCTGAGCTGGGGTG 59.996 52.381 0.00 0.00 0.00 4.61
933 1941 1.366319 ACTTCAATCTGAGCTGGGGT 58.634 50.000 0.00 0.00 0.00 4.95
934 1942 2.363683 GAACTTCAATCTGAGCTGGGG 58.636 52.381 0.00 0.00 0.00 4.96
941 1949 1.671850 GGACGCCGAACTTCAATCTGA 60.672 52.381 0.00 0.00 0.00 3.27
1037 2045 2.139118 GTTGCAGTGGAGTCTCTGAAC 58.861 52.381 16.04 13.17 36.82 3.18
1039 2047 0.315251 CGTTGCAGTGGAGTCTCTGA 59.685 55.000 16.04 3.47 36.82 3.27
1058 2066 2.109126 GGATCGAGCTGGGTTGCAC 61.109 63.158 0.00 0.00 34.99 4.57
1059 2067 2.268920 GGATCGAGCTGGGTTGCA 59.731 61.111 0.00 0.00 34.99 4.08
1060 2068 2.514824 GGGATCGAGCTGGGTTGC 60.515 66.667 0.00 0.00 0.00 4.17
1061 2069 1.987807 ATGGGGATCGAGCTGGGTTG 61.988 60.000 0.00 0.00 0.00 3.77
1062 2070 1.281925 AATGGGGATCGAGCTGGGTT 61.282 55.000 0.00 0.00 0.00 4.11
1063 2071 1.694169 AATGGGGATCGAGCTGGGT 60.694 57.895 0.00 0.00 0.00 4.51
1064 2072 1.228063 CAATGGGGATCGAGCTGGG 60.228 63.158 0.00 0.00 0.00 4.45
1065 2073 0.399454 ATCAATGGGGATCGAGCTGG 59.601 55.000 0.00 0.00 0.00 4.85
1066 2074 1.610102 GGATCAATGGGGATCGAGCTG 60.610 57.143 0.00 0.00 43.69 4.24
1067 2075 0.689623 GGATCAATGGGGATCGAGCT 59.310 55.000 0.00 0.00 43.69 4.09
1068 2076 0.397941 TGGATCAATGGGGATCGAGC 59.602 55.000 0.00 0.00 43.69 5.03
1069 2077 1.271054 GGTGGATCAATGGGGATCGAG 60.271 57.143 0.00 0.00 43.69 4.04
1070 2078 0.764890 GGTGGATCAATGGGGATCGA 59.235 55.000 0.00 0.00 43.69 3.59
1071 2079 0.767375 AGGTGGATCAATGGGGATCG 59.233 55.000 0.00 0.00 43.69 3.69
1072 2080 2.039613 GAGAGGTGGATCAATGGGGATC 59.960 54.545 0.00 0.00 42.36 3.36
1073 2081 2.061061 GAGAGGTGGATCAATGGGGAT 58.939 52.381 0.00 0.00 0.00 3.85
1088 2096 0.609406 TCGTGGAGTCTGTGGAGAGG 60.609 60.000 0.00 0.00 0.00 3.69
1095 2103 4.702081 GCGCGTCGTGGAGTCTGT 62.702 66.667 8.43 0.00 0.00 3.41
1120 2128 2.039624 ACCTCCTCGGATGGCAGT 59.960 61.111 0.00 0.00 36.31 4.40
1126 2134 3.083997 GCCACCACCTCCTCGGAT 61.084 66.667 0.00 0.00 36.31 4.18
1327 2335 1.419374 CTGCGCTTACGTTGAAGACT 58.581 50.000 9.73 0.00 42.83 3.24
1336 2344 3.252484 GGTACCGCTGCGCTTACG 61.252 66.667 18.00 9.74 44.07 3.18
1382 2390 1.581934 CTTGAGTTGAGTTGCACGGA 58.418 50.000 0.00 0.00 0.00 4.69
1393 2401 6.192360 CGTTCAGTTTAACTTCCTTGAGTTG 58.808 40.000 0.00 0.00 39.99 3.16
1484 2495 1.376424 CCACGAACTGGCAGCAGAT 60.376 57.895 15.89 0.00 31.36 2.90
1503 2514 2.124983 CGAGGACCACCATGGCAG 60.125 66.667 13.04 5.77 42.67 4.85
1504 2515 2.606213 TCGAGGACCACCATGGCA 60.606 61.111 13.04 0.00 42.67 4.92
1623 2634 2.359478 GGTGGTTGTACTGGGCGG 60.359 66.667 0.00 0.00 0.00 6.13
1717 2728 1.374252 GAACGAGAAGAAGGCGGCA 60.374 57.895 13.08 0.00 0.00 5.69
1973 2984 2.657237 CGTCCGTCAGGCCTTCTT 59.343 61.111 0.00 0.00 37.47 2.52
1974 2985 3.382832 CCGTCCGTCAGGCCTTCT 61.383 66.667 0.00 0.00 37.47 2.85
2040 3069 0.478507 AAAAGGTGCCTGCCTAGTGT 59.521 50.000 0.00 0.00 38.03 3.55
2050 3079 1.538849 CCTTGCAACTGAAAAGGTGCC 60.539 52.381 12.88 0.00 36.50 5.01
2064 3093 5.438833 TGACATAATGACATGATCCTTGCA 58.561 37.500 0.00 0.00 0.00 4.08
2067 3096 6.769822 GGACTTGACATAATGACATGATCCTT 59.230 38.462 0.00 0.00 0.00 3.36
2080 3109 3.311106 GACGTTGACGGACTTGACATAA 58.689 45.455 8.52 0.00 44.95 1.90
2081 3110 2.352030 GGACGTTGACGGACTTGACATA 60.352 50.000 8.52 0.00 44.95 2.29
2092 3129 1.256652 CTATCACACGGACGTTGACG 58.743 55.000 1.41 1.41 46.33 4.35
2105 3142 6.257411 TCACGAGCACTTACTACTACTATCAC 59.743 42.308 0.00 0.00 0.00 3.06
2114 3151 3.542704 CACGATTCACGAGCACTTACTAC 59.457 47.826 0.00 0.00 45.77 2.73
2115 3152 3.437741 TCACGATTCACGAGCACTTACTA 59.562 43.478 0.00 0.00 45.77 1.82
2116 3153 2.228103 TCACGATTCACGAGCACTTACT 59.772 45.455 0.00 0.00 45.77 2.24
2117 3154 2.341760 GTCACGATTCACGAGCACTTAC 59.658 50.000 0.00 0.00 45.77 2.34
2118 3155 2.592194 GTCACGATTCACGAGCACTTA 58.408 47.619 0.00 0.00 45.77 2.24
2119 3156 1.419374 GTCACGATTCACGAGCACTT 58.581 50.000 0.00 0.00 45.77 3.16
2120 3157 0.388649 GGTCACGATTCACGAGCACT 60.389 55.000 0.00 0.00 45.77 4.40
2121 3158 1.352156 GGGTCACGATTCACGAGCAC 61.352 60.000 0.00 0.00 45.77 4.40
2122 3159 1.080093 GGGTCACGATTCACGAGCA 60.080 57.895 0.00 0.00 45.77 4.26
2182 3219 3.006967 ACCACATCACAACTGGAGTACTC 59.993 47.826 14.87 14.87 0.00 2.59
2183 3220 2.972713 ACCACATCACAACTGGAGTACT 59.027 45.455 0.00 0.00 0.00 2.73
2184 3221 3.067106 CACCACATCACAACTGGAGTAC 58.933 50.000 0.00 0.00 0.00 2.73
2185 3222 2.549992 GCACCACATCACAACTGGAGTA 60.550 50.000 0.00 0.00 0.00 2.59
2186 3223 1.815408 GCACCACATCACAACTGGAGT 60.815 52.381 0.00 0.00 0.00 3.85
2187 3224 0.877071 GCACCACATCACAACTGGAG 59.123 55.000 0.00 0.00 0.00 3.86
2188 3225 0.537143 GGCACCACATCACAACTGGA 60.537 55.000 0.00 0.00 0.00 3.86
2189 3226 0.538057 AGGCACCACATCACAACTGG 60.538 55.000 0.00 0.00 0.00 4.00
2190 3227 0.594602 CAGGCACCACATCACAACTG 59.405 55.000 0.00 0.00 0.00 3.16
2191 3228 0.538057 CCAGGCACCACATCACAACT 60.538 55.000 0.00 0.00 0.00 3.16
2192 3229 1.959085 CCAGGCACCACATCACAAC 59.041 57.895 0.00 0.00 0.00 3.32
2193 3230 1.902918 GCCAGGCACCACATCACAA 60.903 57.895 6.55 0.00 0.00 3.33
2194 3231 2.282391 GCCAGGCACCACATCACA 60.282 61.111 6.55 0.00 0.00 3.58
2195 3232 3.434319 CGCCAGGCACCACATCAC 61.434 66.667 13.30 0.00 0.00 3.06
2196 3233 3.899981 GACGCCAGGCACCACATCA 62.900 63.158 13.30 0.00 0.00 3.07
2197 3234 3.127533 GACGCCAGGCACCACATC 61.128 66.667 13.30 0.00 0.00 3.06
2200 3237 4.760047 ATCGACGCCAGGCACCAC 62.760 66.667 13.30 0.00 0.00 4.16
2201 3238 4.451150 GATCGACGCCAGGCACCA 62.451 66.667 13.30 0.00 0.00 4.17
2232 3269 8.076178 CACTAATTGGCTGCCATAATTTAGTAC 58.924 37.037 27.63 2.89 31.07 2.73
2235 3272 7.042797 ACACTAATTGGCTGCCATAATTTAG 57.957 36.000 24.03 24.29 31.53 1.85
2236 3273 7.416964 AACACTAATTGGCTGCCATAATTTA 57.583 32.000 24.03 15.78 31.53 1.40
2238 3275 5.937975 AACACTAATTGGCTGCCATAATT 57.062 34.783 24.03 21.22 31.53 1.40
2273 3316 9.829507 TCGGGATTTATCATTTGCAAATATTTT 57.170 25.926 23.69 11.39 0.00 1.82
2275 3318 9.260002 GTTCGGGATTTATCATTTGCAAATATT 57.740 29.630 23.69 15.92 0.00 1.28
2277 3320 6.915300 CGTTCGGGATTTATCATTTGCAAATA 59.085 34.615 23.69 12.86 0.00 1.40
2281 3324 3.942115 TCGTTCGGGATTTATCATTTGCA 59.058 39.130 0.00 0.00 0.00 4.08
2282 3325 4.279659 GTCGTTCGGGATTTATCATTTGC 58.720 43.478 0.00 0.00 0.00 3.68
2284 3327 3.558418 CGGTCGTTCGGGATTTATCATTT 59.442 43.478 0.00 0.00 0.00 2.32
2285 3328 3.128349 CGGTCGTTCGGGATTTATCATT 58.872 45.455 0.00 0.00 0.00 2.57
2286 3329 2.547218 CCGGTCGTTCGGGATTTATCAT 60.547 50.000 10.46 0.00 45.78 2.45
2287 3330 1.202440 CCGGTCGTTCGGGATTTATCA 60.202 52.381 10.46 0.00 45.78 2.15
2289 3332 3.673173 CCGGTCGTTCGGGATTTAT 57.327 52.632 10.46 0.00 45.78 1.40
2343 3386 7.439157 TTTGTCATCCTCATGTCAACTAAAG 57.561 36.000 0.00 0.00 37.65 1.85
2353 3396 7.819644 TGTCAACTAAATTTGTCATCCTCATG 58.180 34.615 0.00 0.00 0.00 3.07
2354 3397 8.408043 TTGTCAACTAAATTTGTCATCCTCAT 57.592 30.769 0.00 0.00 0.00 2.90
2367 3410 2.226330 TGCCGTGCTTGTCAACTAAAT 58.774 42.857 0.00 0.00 0.00 1.40
2404 3447 4.759693 AGCATGACAATTTCGTCCTGTTTA 59.240 37.500 0.00 0.00 34.93 2.01
2408 3451 3.837213 AAGCATGACAATTTCGTCCTG 57.163 42.857 0.00 0.00 35.40 3.86
2409 3452 3.689649 GGTAAGCATGACAATTTCGTCCT 59.310 43.478 0.00 0.00 34.88 3.85
2411 3454 4.678509 TGGTAAGCATGACAATTTCGTC 57.321 40.909 0.00 0.00 36.40 4.20
2413 3456 5.046910 AGTTGGTAAGCATGACAATTTCG 57.953 39.130 0.00 0.00 0.00 3.46
2414 3457 8.082242 AGTTTAGTTGGTAAGCATGACAATTTC 58.918 33.333 0.00 0.00 0.00 2.17
2415 3458 7.951591 AGTTTAGTTGGTAAGCATGACAATTT 58.048 30.769 0.00 0.00 0.00 1.82
2421 3465 6.058833 TGACAAGTTTAGTTGGTAAGCATGA 58.941 36.000 0.00 0.00 28.53 3.07
2430 3474 4.455877 GTGAGGGATGACAAGTTTAGTTGG 59.544 45.833 2.66 0.00 0.00 3.77
2443 3487 7.611467 GTGGCAATTTATATATGTGAGGGATGA 59.389 37.037 0.00 0.00 0.00 2.92
2475 3519 2.030401 CCCACGGCAAATCGAACGA 61.030 57.895 0.00 0.00 0.00 3.85
2476 3520 1.570347 TTCCCACGGCAAATCGAACG 61.570 55.000 0.00 0.00 0.00 3.95
2477 3521 0.594110 TTTCCCACGGCAAATCGAAC 59.406 50.000 0.00 0.00 0.00 3.95
2480 3524 1.469079 GGATTTTCCCACGGCAAATCG 60.469 52.381 8.90 0.00 37.66 3.34
2502 3546 0.861837 CCGATAAGCCACGAATGCTC 59.138 55.000 0.00 0.00 38.34 4.26
2503 3547 1.160329 GCCGATAAGCCACGAATGCT 61.160 55.000 0.00 0.00 41.89 3.79
2504 3548 1.279840 GCCGATAAGCCACGAATGC 59.720 57.895 0.00 0.00 0.00 3.56
2506 3550 0.874607 GACGCCGATAAGCCACGAAT 60.875 55.000 0.00 0.00 0.00 3.34
2508 3552 2.103538 GACGCCGATAAGCCACGA 59.896 61.111 0.00 0.00 0.00 4.35
2510 3554 1.022451 TTTGGACGCCGATAAGCCAC 61.022 55.000 0.00 0.00 0.00 5.01
2511 3555 0.107410 ATTTGGACGCCGATAAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
2513 3557 2.354821 AGAAATTTGGACGCCGATAAGC 59.645 45.455 0.00 0.00 0.00 3.09
2543 3588 5.058490 GGCAGCCAAAACATATGCATAATT 58.942 37.500 11.13 5.65 38.63 1.40
2554 3599 3.460857 AAAAATACGGCAGCCAAAACA 57.539 38.095 13.30 0.00 0.00 2.83
2579 3624 5.551760 AGCCAAATAACAATGAGAACTCG 57.448 39.130 0.00 0.00 0.00 4.18
2580 3625 8.897752 AGAATAGCCAAATAACAATGAGAACTC 58.102 33.333 0.00 0.00 0.00 3.01
2582 3627 9.860898 AAAGAATAGCCAAATAACAATGAGAAC 57.139 29.630 0.00 0.00 0.00 3.01
2585 3630 9.079833 CACAAAGAATAGCCAAATAACAATGAG 57.920 33.333 0.00 0.00 0.00 2.90
2646 3691 4.783055 TGTTGGTTGACAAAAGGTAGCTA 58.217 39.130 0.00 0.00 41.58 3.32
2647 3692 3.626930 TGTTGGTTGACAAAAGGTAGCT 58.373 40.909 0.00 0.00 41.58 3.32
2648 3693 4.584327 ATGTTGGTTGACAAAAGGTAGC 57.416 40.909 0.00 0.00 41.58 3.58
2649 3694 5.234116 GCAAATGTTGGTTGACAAAAGGTAG 59.766 40.000 0.00 0.00 41.58 3.18
2651 3696 3.938334 GCAAATGTTGGTTGACAAAAGGT 59.062 39.130 0.00 0.00 41.58 3.50
2652 3697 4.190772 AGCAAATGTTGGTTGACAAAAGG 58.809 39.130 0.00 0.00 41.58 3.11
2675 3722 1.098869 TGTGCAAGGCTCGTGAAAAA 58.901 45.000 0.00 0.00 0.00 1.94
2679 3726 2.280797 GGTGTGCAAGGCTCGTGA 60.281 61.111 0.00 0.00 0.00 4.35
2680 3727 2.591429 TGGTGTGCAAGGCTCGTG 60.591 61.111 0.00 0.00 0.00 4.35
2681 3728 2.116983 ATCTGGTGTGCAAGGCTCGT 62.117 55.000 0.00 0.00 0.00 4.18
2682 3729 1.364626 GATCTGGTGTGCAAGGCTCG 61.365 60.000 0.00 0.00 0.00 5.03
2683 3730 0.321919 TGATCTGGTGTGCAAGGCTC 60.322 55.000 0.00 0.00 0.00 4.70
2684 3731 0.330604 ATGATCTGGTGTGCAAGGCT 59.669 50.000 0.00 0.00 0.00 4.58
2685 3732 0.737219 GATGATCTGGTGTGCAAGGC 59.263 55.000 0.00 0.00 0.00 4.35
2686 3733 1.064906 AGGATGATCTGGTGTGCAAGG 60.065 52.381 0.00 0.00 0.00 3.61
2687 3734 2.014857 CAGGATGATCTGGTGTGCAAG 58.985 52.381 0.00 0.00 39.69 4.01
2688 3735 1.629861 TCAGGATGATCTGGTGTGCAA 59.370 47.619 0.00 0.00 42.56 4.08
2689 3736 1.278537 TCAGGATGATCTGGTGTGCA 58.721 50.000 0.00 0.00 42.56 4.57
2749 3796 9.483916 TCTAGATGAACAGTAAATTCGAAACAA 57.516 29.630 0.00 0.00 0.00 2.83
2750 3797 9.140286 CTCTAGATGAACAGTAAATTCGAAACA 57.860 33.333 0.00 0.00 0.00 2.83
2751 3798 8.111224 GCTCTAGATGAACAGTAAATTCGAAAC 58.889 37.037 0.00 0.00 0.00 2.78
2752 3799 7.817478 TGCTCTAGATGAACAGTAAATTCGAAA 59.183 33.333 0.00 0.00 0.00 3.46
2753 3800 7.320399 TGCTCTAGATGAACAGTAAATTCGAA 58.680 34.615 0.00 0.00 0.00 3.71
2754 3801 6.863275 TGCTCTAGATGAACAGTAAATTCGA 58.137 36.000 0.00 0.00 0.00 3.71
2755 3802 7.706281 ATGCTCTAGATGAACAGTAAATTCG 57.294 36.000 0.00 0.00 0.00 3.34
2789 3836 2.884639 CTCGAGGAGCTTTTGGGAAAAA 59.115 45.455 3.91 0.00 0.00 1.94
2790 3837 2.158667 ACTCGAGGAGCTTTTGGGAAAA 60.159 45.455 18.41 0.00 32.04 2.29
2791 3838 1.420138 ACTCGAGGAGCTTTTGGGAAA 59.580 47.619 18.41 0.00 32.04 3.13
2792 3839 1.056660 ACTCGAGGAGCTTTTGGGAA 58.943 50.000 18.41 0.00 32.04 3.97
2793 3840 0.321671 CACTCGAGGAGCTTTTGGGA 59.678 55.000 18.41 0.00 32.04 4.37
2794 3841 0.035458 ACACTCGAGGAGCTTTTGGG 59.965 55.000 18.41 0.00 32.04 4.12
2795 3842 1.433534 GACACTCGAGGAGCTTTTGG 58.566 55.000 18.41 0.00 32.04 3.28
2796 3843 1.270305 TGGACACTCGAGGAGCTTTTG 60.270 52.381 18.41 6.39 32.04 2.44
2797 3844 1.048601 TGGACACTCGAGGAGCTTTT 58.951 50.000 18.41 0.00 32.04 2.27
2798 3845 1.048601 TTGGACACTCGAGGAGCTTT 58.951 50.000 18.41 0.00 32.04 3.51
2799 3846 1.048601 TTTGGACACTCGAGGAGCTT 58.951 50.000 18.41 0.00 32.04 3.74
2800 3847 0.318762 GTTTGGACACTCGAGGAGCT 59.681 55.000 18.41 0.00 32.04 4.09
2801 3848 0.033504 TGTTTGGACACTCGAGGAGC 59.966 55.000 18.41 4.75 32.04 4.70
2802 3849 2.029020 TGATGTTTGGACACTCGAGGAG 60.029 50.000 18.41 11.44 38.91 3.69
2803 3850 1.967779 TGATGTTTGGACACTCGAGGA 59.032 47.619 18.41 0.00 38.91 3.71
2804 3851 2.069273 GTGATGTTTGGACACTCGAGG 58.931 52.381 18.41 8.36 38.91 4.63
2805 3852 2.754472 TGTGATGTTTGGACACTCGAG 58.246 47.619 11.84 11.84 38.91 4.04
2806 3853 2.900716 TGTGATGTTTGGACACTCGA 57.099 45.000 0.00 0.00 38.91 4.04
2807 3854 3.961477 TTTGTGATGTTTGGACACTCG 57.039 42.857 0.00 0.00 38.91 4.18
2808 3855 7.538303 AAAATTTTGTGATGTTTGGACACTC 57.462 32.000 1.75 0.00 38.91 3.51
2809 3856 8.037758 TGTAAAATTTTGTGATGTTTGGACACT 58.962 29.630 13.76 0.00 38.91 3.55
2810 3857 8.190888 TGTAAAATTTTGTGATGTTTGGACAC 57.809 30.769 13.76 0.00 38.91 3.67
2811 3858 8.824781 CATGTAAAATTTTGTGATGTTTGGACA 58.175 29.630 13.76 5.57 40.71 4.02
2812 3859 8.281893 CCATGTAAAATTTTGTGATGTTTGGAC 58.718 33.333 13.76 0.00 0.00 4.02
2813 3860 8.206867 TCCATGTAAAATTTTGTGATGTTTGGA 58.793 29.630 13.76 10.54 0.00 3.53
2814 3861 8.375608 TCCATGTAAAATTTTGTGATGTTTGG 57.624 30.769 13.76 8.73 0.00 3.28
2817 3864 9.426837 CAGATCCATGTAAAATTTTGTGATGTT 57.573 29.630 13.76 3.37 0.00 2.71
2818 3865 8.587608 ACAGATCCATGTAAAATTTTGTGATGT 58.412 29.630 13.76 9.15 0.00 3.06
2819 3866 8.865978 CACAGATCCATGTAAAATTTTGTGATG 58.134 33.333 13.76 11.36 35.46 3.07
2820 3867 8.587608 ACACAGATCCATGTAAAATTTTGTGAT 58.412 29.630 13.76 7.68 36.58 3.06
2821 3868 7.950512 ACACAGATCCATGTAAAATTTTGTGA 58.049 30.769 13.76 3.46 36.58 3.58
2822 3869 9.859427 ATACACAGATCCATGTAAAATTTTGTG 57.141 29.630 13.76 11.32 35.05 3.33
2827 3874 9.874205 CCAAAATACACAGATCCATGTAAAATT 57.126 29.630 9.95 4.77 35.05 1.82
2828 3875 9.253832 TCCAAAATACACAGATCCATGTAAAAT 57.746 29.630 9.95 0.00 35.05 1.82
2829 3876 8.642935 TCCAAAATACACAGATCCATGTAAAA 57.357 30.769 9.95 0.00 35.05 1.52
2830 3877 8.685427 CATCCAAAATACACAGATCCATGTAAA 58.315 33.333 9.95 0.00 35.05 2.01
2831 3878 7.201812 GCATCCAAAATACACAGATCCATGTAA 60.202 37.037 9.95 0.00 35.05 2.41
2832 3879 6.262944 GCATCCAAAATACACAGATCCATGTA 59.737 38.462 8.65 8.65 35.82 2.29
2833 3880 5.068198 GCATCCAAAATACACAGATCCATGT 59.932 40.000 4.94 4.94 0.00 3.21
2834 3881 5.508489 GGCATCCAAAATACACAGATCCATG 60.508 44.000 0.00 0.00 0.00 3.66
2835 3882 4.586001 GGCATCCAAAATACACAGATCCAT 59.414 41.667 0.00 0.00 0.00 3.41
2836 3883 3.953612 GGCATCCAAAATACACAGATCCA 59.046 43.478 0.00 0.00 0.00 3.41
2837 3884 3.953612 TGGCATCCAAAATACACAGATCC 59.046 43.478 0.00 0.00 0.00 3.36
2838 3885 5.581126 TTGGCATCCAAAATACACAGATC 57.419 39.130 0.00 0.00 40.92 2.75
2895 3942 8.547069 CCACGTAAATTGTGTTTGATGAAAAAT 58.453 29.630 0.00 0.00 35.56 1.82
2896 3943 7.010552 CCCACGTAAATTGTGTTTGATGAAAAA 59.989 33.333 0.00 0.00 35.56 1.94
2897 3944 6.477033 CCCACGTAAATTGTGTTTGATGAAAA 59.523 34.615 0.00 0.00 35.56 2.29
2898 3945 5.980116 CCCACGTAAATTGTGTTTGATGAAA 59.020 36.000 0.00 0.00 35.56 2.69
2899 3946 5.508153 CCCCACGTAAATTGTGTTTGATGAA 60.508 40.000 0.00 0.00 35.56 2.57
2900 3947 4.022762 CCCCACGTAAATTGTGTTTGATGA 60.023 41.667 0.00 0.00 35.56 2.92
2901 3948 4.233789 CCCCACGTAAATTGTGTTTGATG 58.766 43.478 0.00 0.00 35.56 3.07
2902 3949 3.257127 CCCCCACGTAAATTGTGTTTGAT 59.743 43.478 0.00 0.00 35.56 2.57
2903 3950 2.623889 CCCCCACGTAAATTGTGTTTGA 59.376 45.455 0.00 0.00 35.56 2.69
2904 3951 2.362717 ACCCCCACGTAAATTGTGTTTG 59.637 45.455 0.00 0.00 35.56 2.93
2905 3952 2.624364 GACCCCCACGTAAATTGTGTTT 59.376 45.455 0.00 0.00 35.56 2.83
2906 3953 2.232399 GACCCCCACGTAAATTGTGTT 58.768 47.619 0.00 0.00 35.56 3.32
2907 3954 1.143277 TGACCCCCACGTAAATTGTGT 59.857 47.619 0.00 0.00 35.56 3.72
2908 3955 1.898902 TGACCCCCACGTAAATTGTG 58.101 50.000 0.00 0.00 37.09 3.33
2909 3956 2.624364 GTTTGACCCCCACGTAAATTGT 59.376 45.455 0.00 0.00 0.00 2.71
2910 3957 2.029739 GGTTTGACCCCCACGTAAATTG 60.030 50.000 0.00 0.00 30.04 2.32
2911 3958 2.241160 GGTTTGACCCCCACGTAAATT 58.759 47.619 0.00 0.00 30.04 1.82
2912 3959 1.913778 GGTTTGACCCCCACGTAAAT 58.086 50.000 0.00 0.00 30.04 1.40
2913 3960 3.418022 GGTTTGACCCCCACGTAAA 57.582 52.632 0.00 0.00 30.04 2.01
2923 3970 1.524393 ACGTTGACCGGGTTTGACC 60.524 57.895 6.32 0.00 42.24 4.02
2924 3971 1.644913 CACGTTGACCGGGTTTGAC 59.355 57.895 6.32 0.00 42.24 3.18
2925 3972 4.128139 CACGTTGACCGGGTTTGA 57.872 55.556 6.32 0.00 42.24 2.69
2931 3978 3.122948 CAGATTCTAAACACGTTGACCGG 59.877 47.826 0.00 0.00 42.24 5.28
2932 3979 3.122948 CCAGATTCTAAACACGTTGACCG 59.877 47.826 0.00 0.00 44.03 4.79
2933 3980 4.062991 ACCAGATTCTAAACACGTTGACC 58.937 43.478 0.00 0.00 0.00 4.02
2934 3981 5.668558 AACCAGATTCTAAACACGTTGAC 57.331 39.130 0.00 0.00 0.00 3.18
2935 3982 6.459024 CCAAAACCAGATTCTAAACACGTTGA 60.459 38.462 0.00 0.00 0.00 3.18
2936 3983 5.685511 CCAAAACCAGATTCTAAACACGTTG 59.314 40.000 0.00 0.00 0.00 4.10
2937 3984 5.221165 CCCAAAACCAGATTCTAAACACGTT 60.221 40.000 0.00 0.00 0.00 3.99
2938 3985 4.277423 CCCAAAACCAGATTCTAAACACGT 59.723 41.667 0.00 0.00 0.00 4.49
2939 3986 4.794169 CCCAAAACCAGATTCTAAACACG 58.206 43.478 0.00 0.00 0.00 4.49
2940 3987 4.556233 GCCCAAAACCAGATTCTAAACAC 58.444 43.478 0.00 0.00 0.00 3.32
2941 3988 3.576550 GGCCCAAAACCAGATTCTAAACA 59.423 43.478 0.00 0.00 0.00 2.83
2942 3989 3.576550 TGGCCCAAAACCAGATTCTAAAC 59.423 43.478 0.00 0.00 32.06 2.01
2943 3990 3.850752 TGGCCCAAAACCAGATTCTAAA 58.149 40.909 0.00 0.00 32.06 1.85
2944 3991 3.534357 TGGCCCAAAACCAGATTCTAA 57.466 42.857 0.00 0.00 32.06 2.10
2945 3992 3.534357 TTGGCCCAAAACCAGATTCTA 57.466 42.857 0.00 0.00 38.73 2.10
2946 3993 2.368548 GTTTGGCCCAAAACCAGATTCT 59.631 45.455 11.20 0.00 38.73 2.40
2947 3994 2.368548 AGTTTGGCCCAAAACCAGATTC 59.631 45.455 11.20 0.00 40.26 2.52
2948 3995 2.407562 AGTTTGGCCCAAAACCAGATT 58.592 42.857 11.20 0.00 40.26 2.40
2949 3996 2.101640 AGTTTGGCCCAAAACCAGAT 57.898 45.000 11.20 0.00 40.26 2.90
2950 3997 1.872773 AAGTTTGGCCCAAAACCAGA 58.127 45.000 11.20 0.00 40.26 3.86
2951 3998 2.224185 GGTAAGTTTGGCCCAAAACCAG 60.224 50.000 19.28 0.00 40.26 4.00
2952 3999 1.763545 GGTAAGTTTGGCCCAAAACCA 59.236 47.619 19.28 2.91 40.26 3.67
2953 4000 1.071071 GGGTAAGTTTGGCCCAAAACC 59.929 52.381 16.92 16.92 40.26 3.27
2954 4001 1.269883 CGGGTAAGTTTGGCCCAAAAC 60.270 52.381 11.20 5.71 42.44 2.43
2955 4002 1.041437 CGGGTAAGTTTGGCCCAAAA 58.959 50.000 11.20 0.00 42.44 2.44
2956 4003 0.828343 CCGGGTAAGTTTGGCCCAAA 60.828 55.000 4.38 4.38 42.44 3.28
2957 4004 1.228613 CCGGGTAAGTTTGGCCCAA 60.229 57.895 0.00 0.00 42.44 4.12
2958 4005 2.009208 AACCGGGTAAGTTTGGCCCA 62.009 55.000 6.32 0.00 42.44 5.36
2959 4006 0.828762 AAACCGGGTAAGTTTGGCCC 60.829 55.000 6.32 0.00 36.13 5.80
2960 4007 1.042229 AAAACCGGGTAAGTTTGGCC 58.958 50.000 6.32 0.00 37.50 5.36
2961 4008 3.067883 TGTTAAAACCGGGTAAGTTTGGC 59.932 43.478 6.32 0.00 37.50 4.52
2962 4009 4.338964 AGTGTTAAAACCGGGTAAGTTTGG 59.661 41.667 6.32 0.00 37.50 3.28
2963 4010 5.503662 AGTGTTAAAACCGGGTAAGTTTG 57.496 39.130 6.32 0.00 37.50 2.93
2964 4011 5.651576 TCAAGTGTTAAAACCGGGTAAGTTT 59.348 36.000 6.32 0.00 39.07 2.66
2965 4012 5.192176 TCAAGTGTTAAAACCGGGTAAGTT 58.808 37.500 6.32 0.00 0.00 2.66
2966 4013 4.779696 TCAAGTGTTAAAACCGGGTAAGT 58.220 39.130 6.32 0.00 0.00 2.24
2967 4014 5.278120 CCTTCAAGTGTTAAAACCGGGTAAG 60.278 44.000 6.32 0.00 0.00 2.34
2968 4015 4.579753 CCTTCAAGTGTTAAAACCGGGTAA 59.420 41.667 6.32 0.00 0.00 2.85
2969 4016 4.136051 CCTTCAAGTGTTAAAACCGGGTA 58.864 43.478 6.32 0.00 0.00 3.69
2970 4017 2.953648 CCTTCAAGTGTTAAAACCGGGT 59.046 45.455 6.32 0.00 0.00 5.28
2971 4018 3.004002 GTCCTTCAAGTGTTAAAACCGGG 59.996 47.826 6.32 0.00 0.00 5.73
2972 4019 3.004002 GGTCCTTCAAGTGTTAAAACCGG 59.996 47.826 0.00 0.00 0.00 5.28
2973 4020 3.628487 TGGTCCTTCAAGTGTTAAAACCG 59.372 43.478 0.00 0.00 0.00 4.44
2974 4021 5.585820 TTGGTCCTTCAAGTGTTAAAACC 57.414 39.130 0.00 0.00 0.00 3.27
2975 4022 7.039270 ACATTTGGTCCTTCAAGTGTTAAAAC 58.961 34.615 0.00 0.00 42.31 2.43
2976 4023 7.176589 ACATTTGGTCCTTCAAGTGTTAAAA 57.823 32.000 0.00 0.00 42.31 1.52
2977 4024 6.783708 ACATTTGGTCCTTCAAGTGTTAAA 57.216 33.333 0.00 0.00 42.31 1.52
2978 4025 6.385649 GACATTTGGTCCTTCAAGTGTTAA 57.614 37.500 7.06 0.00 44.03 2.01
2980 4027 4.918810 GACATTTGGTCCTTCAAGTGTT 57.081 40.909 7.06 0.00 44.03 3.32
2991 4038 7.255451 TCAAGATTTTGTGGTAGACATTTGGTC 60.255 37.037 0.00 0.00 39.84 4.02
2992 4039 6.549364 TCAAGATTTTGTGGTAGACATTTGGT 59.451 34.615 0.00 0.00 35.73 3.67
2993 4040 6.980593 TCAAGATTTTGTGGTAGACATTTGG 58.019 36.000 0.00 0.00 35.73 3.28
2994 4041 7.596248 CCTTCAAGATTTTGTGGTAGACATTTG 59.404 37.037 0.00 0.00 35.73 2.32
2995 4042 7.255942 CCCTTCAAGATTTTGTGGTAGACATTT 60.256 37.037 0.00 0.00 35.73 2.32
2996 4043 6.209391 CCCTTCAAGATTTTGTGGTAGACATT 59.791 38.462 0.00 0.00 35.73 2.71
2997 4044 5.711976 CCCTTCAAGATTTTGTGGTAGACAT 59.288 40.000 0.00 0.00 35.73 3.06
2998 4045 5.070001 CCCTTCAAGATTTTGTGGTAGACA 58.930 41.667 0.00 0.00 35.73 3.41
2999 4046 4.082733 GCCCTTCAAGATTTTGTGGTAGAC 60.083 45.833 0.00 0.00 35.73 2.59
3000 4047 4.079253 GCCCTTCAAGATTTTGTGGTAGA 58.921 43.478 0.00 0.00 35.73 2.59
3001 4048 3.193479 GGCCCTTCAAGATTTTGTGGTAG 59.807 47.826 0.00 0.00 35.73 3.18
3002 4049 3.161866 GGCCCTTCAAGATTTTGTGGTA 58.838 45.455 0.00 0.00 35.73 3.25
3003 4050 1.970640 GGCCCTTCAAGATTTTGTGGT 59.029 47.619 0.00 0.00 35.73 4.16
3004 4051 1.969923 TGGCCCTTCAAGATTTTGTGG 59.030 47.619 0.00 0.75 35.73 4.17
3005 4052 3.070015 ACTTGGCCCTTCAAGATTTTGTG 59.930 43.478 7.51 0.00 44.98 3.33
3006 4053 3.308401 ACTTGGCCCTTCAAGATTTTGT 58.692 40.909 7.51 0.00 44.98 2.83
3007 4054 3.575687 AGACTTGGCCCTTCAAGATTTTG 59.424 43.478 7.51 0.00 44.98 2.44
3008 4055 3.849527 AGACTTGGCCCTTCAAGATTTT 58.150 40.909 7.51 0.00 44.98 1.82
3009 4056 3.532641 AGACTTGGCCCTTCAAGATTT 57.467 42.857 7.51 0.00 44.98 2.17
3010 4057 4.870021 ATAGACTTGGCCCTTCAAGATT 57.130 40.909 7.51 0.00 44.98 2.40
3011 4058 4.971924 AGTATAGACTTGGCCCTTCAAGAT 59.028 41.667 7.51 0.00 44.98 2.40
3012 4059 4.362677 AGTATAGACTTGGCCCTTCAAGA 58.637 43.478 7.51 0.00 44.98 3.02
3013 4060 4.762289 AGTATAGACTTGGCCCTTCAAG 57.238 45.455 0.00 0.00 46.86 3.02
3014 4061 5.514500 AAAGTATAGACTTGGCCCTTCAA 57.486 39.130 2.98 0.00 45.50 2.69
3015 4062 5.253330 CAAAAGTATAGACTTGGCCCTTCA 58.747 41.667 2.98 0.00 45.50 3.02
3016 4063 4.640647 CCAAAAGTATAGACTTGGCCCTTC 59.359 45.833 2.98 0.00 45.50 3.46
3017 4064 4.291249 TCCAAAAGTATAGACTTGGCCCTT 59.709 41.667 2.98 0.00 45.50 3.95
3018 4065 3.850173 TCCAAAAGTATAGACTTGGCCCT 59.150 43.478 2.98 0.00 45.50 5.19
3019 4066 4.080526 TCTCCAAAAGTATAGACTTGGCCC 60.081 45.833 2.98 0.00 45.50 5.80
3020 4067 5.099042 TCTCCAAAAGTATAGACTTGGCC 57.901 43.478 2.98 0.00 45.50 5.36
3021 4068 6.174049 AGTTCTCCAAAAGTATAGACTTGGC 58.826 40.000 2.98 0.00 45.50 4.52
3022 4069 7.878127 TCAAGTTCTCCAAAAGTATAGACTTGG 59.122 37.037 2.98 2.61 45.50 3.61
3023 4070 8.833231 TCAAGTTCTCCAAAAGTATAGACTTG 57.167 34.615 2.98 0.00 45.50 3.16
3025 4072 8.871125 TCTTCAAGTTCTCCAAAAGTATAGACT 58.129 33.333 0.00 0.00 37.59 3.24
3026 4073 9.660180 ATCTTCAAGTTCTCCAAAAGTATAGAC 57.340 33.333 0.00 0.00 0.00 2.59
3027 4074 9.877178 GATCTTCAAGTTCTCCAAAAGTATAGA 57.123 33.333 0.00 0.00 0.00 1.98
3028 4075 9.658799 TGATCTTCAAGTTCTCCAAAAGTATAG 57.341 33.333 0.00 0.00 0.00 1.31
3030 4077 8.924511 TTGATCTTCAAGTTCTCCAAAAGTAT 57.075 30.769 0.00 0.00 31.83 2.12
3031 4078 8.746052 TTTGATCTTCAAGTTCTCCAAAAGTA 57.254 30.769 0.00 0.00 37.70 2.24
3032 4079 7.645058 TTTGATCTTCAAGTTCTCCAAAAGT 57.355 32.000 0.00 0.00 37.70 2.66
3033 4080 8.811378 GTTTTTGATCTTCAAGTTCTCCAAAAG 58.189 33.333 0.00 0.00 37.70 2.27
3034 4081 8.310382 TGTTTTTGATCTTCAAGTTCTCCAAAA 58.690 29.630 0.00 0.00 37.70 2.44
3035 4082 7.835822 TGTTTTTGATCTTCAAGTTCTCCAAA 58.164 30.769 0.00 0.00 37.70 3.28
3036 4083 7.403312 TGTTTTTGATCTTCAAGTTCTCCAA 57.597 32.000 0.00 0.00 37.70 3.53
3037 4084 7.587037 ATGTTTTTGATCTTCAAGTTCTCCA 57.413 32.000 0.00 0.00 37.70 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.