Multiple sequence alignment - TraesCS6D01G088200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G088200 chr6D 100.000 2884 0 0 1 2884 53564390 53567273 0.000000e+00 5326.0
1 TraesCS6D01G088200 chr6D 86.400 125 16 1 2309 2433 431160828 431160705 5.010000e-28 135.0
2 TraesCS6D01G088200 chr6B 93.363 2441 102 29 1 2420 118187950 118185549 0.000000e+00 3555.0
3 TraesCS6D01G088200 chr6A 93.890 2324 79 31 1 2293 61876636 61874345 0.000000e+00 3446.0
4 TraesCS6D01G088200 chr5D 87.200 125 16 0 2309 2433 97073710 97073834 3.000000e-30 143.0
5 TraesCS6D01G088200 chr1D 87.200 125 16 0 2309 2433 332997175 332997299 3.000000e-30 143.0
6 TraesCS6D01G088200 chr1B 87.200 125 16 0 2309 2433 314565699 314565575 3.000000e-30 143.0
7 TraesCS6D01G088200 chr5B 86.047 129 17 1 2305 2433 542951828 542951701 1.390000e-28 137.0
8 TraesCS6D01G088200 chr3A 86.400 125 17 0 2309 2433 510298653 510298777 1.390000e-28 137.0
9 TraesCS6D01G088200 chr2A 86.508 126 16 1 2309 2433 696850877 696850752 1.390000e-28 137.0
10 TraesCS6D01G088200 chr1A 87.395 119 15 0 2305 2423 564757342 564757224 1.390000e-28 137.0
11 TraesCS6D01G088200 chr2D 85.385 130 16 3 2306 2433 336511130 336511258 6.480000e-27 132.0
12 TraesCS6D01G088200 chr7A 100.000 50 0 0 1 50 217584138 217584187 3.060000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G088200 chr6D 53564390 53567273 2883 False 5326 5326 100.000 1 2884 1 chr6D.!!$F1 2883
1 TraesCS6D01G088200 chr6B 118185549 118187950 2401 True 3555 3555 93.363 1 2420 1 chr6B.!!$R1 2419
2 TraesCS6D01G088200 chr6A 61874345 61876636 2291 True 3446 3446 93.890 1 2293 1 chr6A.!!$R1 2292

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
609 629 2.427453 TCTCATTCTTCGGCCACTAGAC 59.573 50.0 2.24 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2020 2043 0.099436 GGATGGCAAAGTGCTAAGCG 59.901 55.0 0.0 0.0 44.28 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
178 180 5.634118 AGAAGATTCACTGGTGATTTGGAA 58.366 37.500 4.19 0.00 39.64 3.53
360 362 7.535940 GCTAGATAAACGTCTTAGATGCTAGTG 59.464 40.741 0.72 0.00 0.00 2.74
368 370 9.517609 AACGTCTTAGATGCTAGTGTATAAAAG 57.482 33.333 0.72 0.00 0.00 2.27
427 431 5.398603 TCTGCTTGTGGAAACAAAAAGAA 57.601 34.783 0.00 0.00 46.06 2.52
558 575 5.173774 AGCGCACAACCTTTTCATATATG 57.826 39.130 11.47 6.36 0.00 1.78
609 629 2.427453 TCTCATTCTTCGGCCACTAGAC 59.573 50.000 2.24 0.00 0.00 2.59
628 648 3.119173 AGACTGCATCACTGTTCTCTAGC 60.119 47.826 0.00 0.00 0.00 3.42
1149 1170 0.449388 CCTTTCTGATGTTCGCCTGC 59.551 55.000 0.00 0.00 0.00 4.85
1170 1191 3.441163 CGATTGTGAAATGATGCAAGGG 58.559 45.455 0.00 0.00 0.00 3.95
1179 1200 4.662966 AATGATGCAAGGGGCTATATCA 57.337 40.909 0.00 0.00 45.15 2.15
1180 1201 4.875578 ATGATGCAAGGGGCTATATCAT 57.124 40.909 0.00 0.00 45.15 2.45
1181 1202 3.959293 TGATGCAAGGGGCTATATCATG 58.041 45.455 0.00 0.00 45.15 3.07
1182 1203 3.588396 TGATGCAAGGGGCTATATCATGA 59.412 43.478 0.00 0.00 45.15 3.07
1183 1204 4.228895 TGATGCAAGGGGCTATATCATGAT 59.771 41.667 13.81 13.81 45.15 2.45
1184 1205 4.662966 TGCAAGGGGCTATATCATGATT 57.337 40.909 14.65 4.68 45.15 2.57
1185 1206 4.592942 TGCAAGGGGCTATATCATGATTC 58.407 43.478 14.65 1.27 45.15 2.52
1226 1247 2.660552 CAAGGTGTTCCGCGACGT 60.661 61.111 8.23 0.00 39.05 4.34
1268 1289 2.983030 GTGCATGGCGGTGGACAA 60.983 61.111 8.97 0.00 39.84 3.18
1403 1425 3.802685 GCACGGATACCATCTTACAGAAC 59.197 47.826 0.00 0.00 0.00 3.01
1493 1516 0.035056 AGGAGGAAATCTGCAACCGG 60.035 55.000 0.00 0.00 36.17 5.28
1664 1687 2.122564 GCAGCAAGAACAAAGAGCAAC 58.877 47.619 0.00 0.00 0.00 4.17
2003 2026 3.099141 TCTGCCATCCCAATTTTTCTCC 58.901 45.455 0.00 0.00 0.00 3.71
2010 2033 5.957774 CCATCCCAATTTTTCTCCTTCCTAA 59.042 40.000 0.00 0.00 0.00 2.69
2012 2035 7.418254 CCATCCCAATTTTTCTCCTTCCTAATG 60.418 40.741 0.00 0.00 0.00 1.90
2013 2036 5.957774 TCCCAATTTTTCTCCTTCCTAATGG 59.042 40.000 0.00 0.00 0.00 3.16
2041 2065 0.734889 CTTAGCACTTTGCCATCCCG 59.265 55.000 0.00 0.00 46.52 5.14
2042 2066 0.679640 TTAGCACTTTGCCATCCCGG 60.680 55.000 0.00 0.00 46.52 5.73
2043 2067 1.847798 TAGCACTTTGCCATCCCGGT 61.848 55.000 0.00 0.00 46.52 5.28
2044 2068 2.700773 GCACTTTGCCATCCCGGTC 61.701 63.158 0.00 0.00 37.42 4.79
2045 2069 1.303236 CACTTTGCCATCCCGGTCA 60.303 57.895 0.00 0.00 36.97 4.02
2053 2077 1.378762 CATCCCGGTCAGGTGGTTT 59.621 57.895 0.00 0.00 38.74 3.27
2083 2118 5.356751 TGATATTTTCTGGCTTGCGTGTATT 59.643 36.000 0.00 0.00 0.00 1.89
2084 2119 4.519540 ATTTTCTGGCTTGCGTGTATTT 57.480 36.364 0.00 0.00 0.00 1.40
2135 2170 8.715191 TTTTGTGACATCAGTGCTTTTATTTT 57.285 26.923 0.00 0.00 0.00 1.82
2137 2172 6.804677 TGTGACATCAGTGCTTTTATTTTGT 58.195 32.000 0.00 0.00 0.00 2.83
2165 2200 8.711457 CATTTTTGTGAATACTGACAAATTCCC 58.289 33.333 0.00 0.00 40.73 3.97
2169 2204 2.052782 ATACTGACAAATTCCCGCCC 57.947 50.000 0.00 0.00 0.00 6.13
2170 2205 0.693622 TACTGACAAATTCCCGCCCA 59.306 50.000 0.00 0.00 0.00 5.36
2171 2206 0.178975 ACTGACAAATTCCCGCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
2172 2207 0.243636 CTGACAAATTCCCGCCCAAC 59.756 55.000 0.00 0.00 0.00 3.77
2173 2208 0.468214 TGACAAATTCCCGCCCAACA 60.468 50.000 0.00 0.00 0.00 3.33
2174 2209 0.243636 GACAAATTCCCGCCCAACAG 59.756 55.000 0.00 0.00 0.00 3.16
2185 2220 0.244721 GCCCAACAGCCAACTCATTC 59.755 55.000 0.00 0.00 0.00 2.67
2218 2253 6.921857 TCGAAGAGTACTTTTAGGTCAGTTTG 59.078 38.462 0.00 0.00 36.39 2.93
2254 2290 3.368220 CGGTTTGCATCAATGAAATGGGA 60.368 43.478 0.00 0.00 0.00 4.37
2279 2315 2.311124 GTTATGAACCTCTCCCACGG 57.689 55.000 0.00 0.00 0.00 4.94
2296 2332 0.039074 CGGGAGTATCATGGAGCGTC 60.039 60.000 0.00 0.00 36.25 5.19
2299 2335 2.546795 GGGAGTATCATGGAGCGTCAAG 60.547 54.545 0.00 0.00 36.25 3.02
2303 2339 2.898729 ATCATGGAGCGTCAAGTAGG 57.101 50.000 0.00 0.00 0.00 3.18
2314 2350 3.679083 GCGTCAAGTAGGCATTTACTCCT 60.679 47.826 0.00 0.00 38.86 3.69
2317 2353 5.624738 CGTCAAGTAGGCATTTACTCCTTCT 60.625 44.000 0.00 0.00 32.84 2.85
2318 2354 5.582665 GTCAAGTAGGCATTTACTCCTTCTG 59.417 44.000 0.00 0.00 32.84 3.02
2321 2357 6.128138 AGTAGGCATTTACTCCTTCTGTTT 57.872 37.500 0.00 0.00 34.02 2.83
2420 2456 9.469807 AATTCATTTGTTTTGCTTCGTATGTAA 57.530 25.926 0.00 0.00 0.00 2.41
2421 2457 9.638239 ATTCATTTGTTTTGCTTCGTATGTAAT 57.362 25.926 0.00 0.00 0.00 1.89
2422 2458 8.667987 TCATTTGTTTTGCTTCGTATGTAATC 57.332 30.769 0.00 0.00 0.00 1.75
2423 2459 8.511321 TCATTTGTTTTGCTTCGTATGTAATCT 58.489 29.630 0.00 0.00 0.00 2.40
2424 2460 8.577939 CATTTGTTTTGCTTCGTATGTAATCTG 58.422 33.333 0.00 0.00 0.00 2.90
2425 2461 5.627172 TGTTTTGCTTCGTATGTAATCTGC 58.373 37.500 0.00 0.00 0.00 4.26
2426 2462 5.180304 TGTTTTGCTTCGTATGTAATCTGCA 59.820 36.000 0.00 0.00 0.00 4.41
2427 2463 6.128035 TGTTTTGCTTCGTATGTAATCTGCAT 60.128 34.615 0.00 0.00 0.00 3.96
2428 2464 6.435430 TTTGCTTCGTATGTAATCTGCATT 57.565 33.333 0.00 0.00 0.00 3.56
2429 2465 5.408204 TGCTTCGTATGTAATCTGCATTG 57.592 39.130 0.00 0.00 0.00 2.82
2430 2466 4.273235 TGCTTCGTATGTAATCTGCATTGG 59.727 41.667 0.00 0.00 0.00 3.16
2431 2467 4.511454 GCTTCGTATGTAATCTGCATTGGA 59.489 41.667 0.00 0.00 0.00 3.53
2432 2468 5.007626 GCTTCGTATGTAATCTGCATTGGAA 59.992 40.000 0.00 0.00 0.00 3.53
2433 2469 5.984233 TCGTATGTAATCTGCATTGGAAC 57.016 39.130 0.00 0.00 0.00 3.62
2434 2470 5.423886 TCGTATGTAATCTGCATTGGAACA 58.576 37.500 0.00 0.00 0.00 3.18
2435 2471 5.523552 TCGTATGTAATCTGCATTGGAACAG 59.476 40.000 0.00 0.00 42.39 3.16
2436 2472 5.277490 CGTATGTAATCTGCATTGGAACAGG 60.277 44.000 0.00 0.00 42.39 4.00
2437 2473 3.355378 TGTAATCTGCATTGGAACAGGG 58.645 45.455 0.00 0.00 42.39 4.45
2438 2474 2.905415 AATCTGCATTGGAACAGGGA 57.095 45.000 0.00 0.00 42.39 4.20
2439 2475 2.431954 ATCTGCATTGGAACAGGGAG 57.568 50.000 0.00 0.00 42.39 4.30
2440 2476 1.067295 TCTGCATTGGAACAGGGAGT 58.933 50.000 0.00 0.00 42.39 3.85
2441 2477 2.265367 TCTGCATTGGAACAGGGAGTA 58.735 47.619 0.00 0.00 42.39 2.59
2442 2478 2.237143 TCTGCATTGGAACAGGGAGTAG 59.763 50.000 0.00 0.00 42.39 2.57
2443 2479 1.340017 TGCATTGGAACAGGGAGTAGC 60.340 52.381 0.00 0.00 42.39 3.58
2444 2480 1.065126 GCATTGGAACAGGGAGTAGCT 60.065 52.381 0.00 0.00 42.39 3.32
2445 2481 2.170607 GCATTGGAACAGGGAGTAGCTA 59.829 50.000 0.00 0.00 42.39 3.32
2446 2482 3.370527 GCATTGGAACAGGGAGTAGCTAA 60.371 47.826 0.00 0.00 42.39 3.09
2447 2483 3.975168 TTGGAACAGGGAGTAGCTAAC 57.025 47.619 0.00 0.00 42.39 2.34
2448 2484 2.897350 TGGAACAGGGAGTAGCTAACA 58.103 47.619 0.00 0.00 0.00 2.41
2449 2485 2.832129 TGGAACAGGGAGTAGCTAACAG 59.168 50.000 0.00 0.00 0.00 3.16
2450 2486 2.418884 GGAACAGGGAGTAGCTAACAGC 60.419 54.545 0.00 0.00 42.84 4.40
2451 2487 1.938585 ACAGGGAGTAGCTAACAGCA 58.061 50.000 0.00 0.00 45.56 4.41
2452 2488 2.257207 ACAGGGAGTAGCTAACAGCAA 58.743 47.619 0.00 0.00 45.56 3.91
2453 2489 2.028020 ACAGGGAGTAGCTAACAGCAAC 60.028 50.000 0.00 0.00 45.56 4.17
2454 2490 2.028112 CAGGGAGTAGCTAACAGCAACA 60.028 50.000 0.00 0.00 45.56 3.33
2455 2491 2.637872 AGGGAGTAGCTAACAGCAACAA 59.362 45.455 0.00 0.00 45.56 2.83
2456 2492 3.072476 AGGGAGTAGCTAACAGCAACAAA 59.928 43.478 0.00 0.00 45.56 2.83
2457 2493 3.818773 GGGAGTAGCTAACAGCAACAAAA 59.181 43.478 0.00 0.00 45.56 2.44
2458 2494 4.459337 GGGAGTAGCTAACAGCAACAAAAT 59.541 41.667 0.00 0.00 45.56 1.82
2459 2495 5.393962 GGAGTAGCTAACAGCAACAAAATG 58.606 41.667 0.00 0.00 45.56 2.32
2460 2496 4.798574 AGTAGCTAACAGCAACAAAATGC 58.201 39.130 0.00 0.00 45.56 3.56
2467 2503 3.003740 GCAACAAAATGCCTTGCCA 57.996 47.368 0.00 0.00 40.49 4.92
2468 2504 0.587768 GCAACAAAATGCCTTGCCAC 59.412 50.000 0.00 0.00 40.49 5.01
2469 2505 1.950828 CAACAAAATGCCTTGCCACA 58.049 45.000 0.00 0.00 0.00 4.17
2470 2506 2.496111 CAACAAAATGCCTTGCCACAT 58.504 42.857 0.00 0.00 0.00 3.21
2471 2507 2.172851 ACAAAATGCCTTGCCACATG 57.827 45.000 0.00 0.00 0.00 3.21
2472 2508 1.270947 ACAAAATGCCTTGCCACATGG 60.271 47.619 0.00 0.00 38.53 3.66
2473 2509 1.058284 AAAATGCCTTGCCACATGGT 58.942 45.000 0.00 0.00 37.57 3.55
2474 2510 1.935799 AAATGCCTTGCCACATGGTA 58.064 45.000 0.00 0.00 37.57 3.25
2475 2511 1.935799 AATGCCTTGCCACATGGTAA 58.064 45.000 0.00 1.28 37.46 2.85
2476 2512 2.163810 ATGCCTTGCCACATGGTAAT 57.836 45.000 1.63 0.00 39.07 1.89
2477 2513 2.816777 TGCCTTGCCACATGGTAATA 57.183 45.000 1.63 0.00 39.07 0.98
2478 2514 3.093057 TGCCTTGCCACATGGTAATAA 57.907 42.857 1.63 0.00 39.07 1.40
2479 2515 2.757868 TGCCTTGCCACATGGTAATAAC 59.242 45.455 1.63 0.00 39.07 1.89
2480 2516 2.757868 GCCTTGCCACATGGTAATAACA 59.242 45.455 1.63 0.00 39.07 2.41
2481 2517 3.194542 GCCTTGCCACATGGTAATAACAA 59.805 43.478 1.63 0.00 39.07 2.83
2482 2518 4.322349 GCCTTGCCACATGGTAATAACAAA 60.322 41.667 1.63 0.00 39.07 2.83
2483 2519 5.788450 CCTTGCCACATGGTAATAACAAAA 58.212 37.500 1.63 0.00 39.07 2.44
2484 2520 6.226787 CCTTGCCACATGGTAATAACAAAAA 58.773 36.000 1.63 0.00 39.07 1.94
2485 2521 6.368516 CCTTGCCACATGGTAATAACAAAAAG 59.631 38.462 1.63 0.00 39.07 2.27
2486 2522 6.412362 TGCCACATGGTAATAACAAAAAGT 57.588 33.333 0.00 0.00 37.57 2.66
2487 2523 7.526142 TGCCACATGGTAATAACAAAAAGTA 57.474 32.000 0.00 0.00 37.57 2.24
2488 2524 8.128322 TGCCACATGGTAATAACAAAAAGTAT 57.872 30.769 0.00 0.00 37.57 2.12
2489 2525 8.589338 TGCCACATGGTAATAACAAAAAGTATT 58.411 29.630 0.00 0.00 37.57 1.89
2490 2526 9.430623 GCCACATGGTAATAACAAAAAGTATTT 57.569 29.630 0.00 0.00 37.45 1.40
2517 2553 4.820897 ACACTAATGTGAAAGATGAGCGA 58.179 39.130 3.03 0.00 46.55 4.93
2518 2554 5.423015 ACACTAATGTGAAAGATGAGCGAT 58.577 37.500 3.03 0.00 46.55 4.58
2519 2555 5.292834 ACACTAATGTGAAAGATGAGCGATG 59.707 40.000 3.03 0.00 46.55 3.84
2520 2556 5.521372 CACTAATGTGAAAGATGAGCGATGA 59.479 40.000 0.00 0.00 46.55 2.92
2521 2557 4.871993 AATGTGAAAGATGAGCGATGAC 57.128 40.909 0.00 0.00 0.00 3.06
2522 2558 2.262211 TGTGAAAGATGAGCGATGACG 58.738 47.619 0.00 0.00 42.93 4.35
2523 2559 2.263077 GTGAAAGATGAGCGATGACGT 58.737 47.619 0.00 0.00 41.98 4.34
2524 2560 2.668457 GTGAAAGATGAGCGATGACGTT 59.332 45.455 0.00 0.00 41.98 3.99
2525 2561 3.123621 GTGAAAGATGAGCGATGACGTTT 59.876 43.478 0.00 0.00 41.98 3.60
2526 2562 4.326278 GTGAAAGATGAGCGATGACGTTTA 59.674 41.667 0.00 0.00 41.98 2.01
2527 2563 5.005779 GTGAAAGATGAGCGATGACGTTTAT 59.994 40.000 0.00 0.00 41.98 1.40
2528 2564 5.005682 TGAAAGATGAGCGATGACGTTTATG 59.994 40.000 0.00 0.00 41.98 1.90
2529 2565 2.797156 AGATGAGCGATGACGTTTATGC 59.203 45.455 0.00 0.00 41.98 3.14
2530 2566 2.003196 TGAGCGATGACGTTTATGCA 57.997 45.000 0.00 0.00 41.98 3.96
2531 2567 1.926510 TGAGCGATGACGTTTATGCAG 59.073 47.619 0.00 0.00 41.98 4.41
2532 2568 1.927174 GAGCGATGACGTTTATGCAGT 59.073 47.619 0.00 0.00 41.98 4.40
2533 2569 3.113322 GAGCGATGACGTTTATGCAGTA 58.887 45.455 0.00 0.00 41.98 2.74
2534 2570 3.116300 AGCGATGACGTTTATGCAGTAG 58.884 45.455 0.00 0.00 41.98 2.57
2535 2571 2.218759 GCGATGACGTTTATGCAGTAGG 59.781 50.000 0.00 0.00 41.98 3.18
2536 2572 3.702330 CGATGACGTTTATGCAGTAGGA 58.298 45.455 0.00 0.00 34.56 2.94
2537 2573 4.299155 CGATGACGTTTATGCAGTAGGAT 58.701 43.478 0.00 0.00 34.56 3.24
2538 2574 4.383052 CGATGACGTTTATGCAGTAGGATC 59.617 45.833 0.00 0.00 34.56 3.36
2539 2575 4.729227 TGACGTTTATGCAGTAGGATCA 57.271 40.909 0.00 0.00 0.00 2.92
2540 2576 5.079689 TGACGTTTATGCAGTAGGATCAA 57.920 39.130 0.00 0.00 0.00 2.57
2541 2577 5.483811 TGACGTTTATGCAGTAGGATCAAA 58.516 37.500 0.00 0.00 0.00 2.69
2542 2578 5.580691 TGACGTTTATGCAGTAGGATCAAAG 59.419 40.000 0.00 0.00 0.00 2.77
2543 2579 4.876107 ACGTTTATGCAGTAGGATCAAAGG 59.124 41.667 0.00 0.00 0.00 3.11
2544 2580 4.260784 CGTTTATGCAGTAGGATCAAAGGC 60.261 45.833 0.00 0.00 0.00 4.35
2545 2581 1.959042 ATGCAGTAGGATCAAAGGCG 58.041 50.000 0.00 0.00 0.00 5.52
2546 2582 0.107703 TGCAGTAGGATCAAAGGCGG 60.108 55.000 0.00 0.00 0.00 6.13
2547 2583 0.815615 GCAGTAGGATCAAAGGCGGG 60.816 60.000 0.00 0.00 0.00 6.13
2548 2584 0.815615 CAGTAGGATCAAAGGCGGGC 60.816 60.000 0.00 0.00 0.00 6.13
2549 2585 1.887707 GTAGGATCAAAGGCGGGCG 60.888 63.158 0.00 0.00 0.00 6.13
2550 2586 2.363975 TAGGATCAAAGGCGGGCGT 61.364 57.895 0.00 0.00 0.00 5.68
2551 2587 2.306255 TAGGATCAAAGGCGGGCGTC 62.306 60.000 0.00 0.00 0.00 5.19
2552 2588 3.564027 GATCAAAGGCGGGCGTCG 61.564 66.667 0.00 0.00 42.76 5.12
2553 2589 4.077184 ATCAAAGGCGGGCGTCGA 62.077 61.111 0.00 0.00 42.43 4.20
2561 2597 4.873129 CGGGCGTCGACTGGGATG 62.873 72.222 14.70 0.00 42.43 3.51
2562 2598 4.530857 GGGCGTCGACTGGGATGG 62.531 72.222 14.70 0.00 0.00 3.51
2563 2599 3.458163 GGCGTCGACTGGGATGGA 61.458 66.667 14.70 0.00 0.00 3.41
2564 2600 2.577059 GCGTCGACTGGGATGGAA 59.423 61.111 14.70 0.00 0.00 3.53
2565 2601 1.079405 GCGTCGACTGGGATGGAAA 60.079 57.895 14.70 0.00 0.00 3.13
2566 2602 0.462047 GCGTCGACTGGGATGGAAAT 60.462 55.000 14.70 0.00 0.00 2.17
2567 2603 1.571919 CGTCGACTGGGATGGAAATC 58.428 55.000 14.70 0.00 0.00 2.17
2568 2604 1.137086 CGTCGACTGGGATGGAAATCT 59.863 52.381 14.70 0.00 0.00 2.40
2569 2605 2.361119 CGTCGACTGGGATGGAAATCTA 59.639 50.000 14.70 0.00 0.00 1.98
2570 2606 3.181479 CGTCGACTGGGATGGAAATCTAA 60.181 47.826 14.70 0.00 0.00 2.10
2571 2607 4.120589 GTCGACTGGGATGGAAATCTAAC 58.879 47.826 8.70 0.00 0.00 2.34
2572 2608 3.134081 TCGACTGGGATGGAAATCTAACC 59.866 47.826 0.00 0.00 0.00 2.85
2573 2609 3.118408 CGACTGGGATGGAAATCTAACCA 60.118 47.826 0.00 0.00 40.57 3.67
2574 2610 4.200092 GACTGGGATGGAAATCTAACCAC 58.800 47.826 0.00 0.00 39.06 4.16
2575 2611 3.852578 ACTGGGATGGAAATCTAACCACT 59.147 43.478 0.00 0.00 39.06 4.00
2576 2612 4.080299 ACTGGGATGGAAATCTAACCACTC 60.080 45.833 0.00 0.00 39.06 3.51
2577 2613 4.111577 TGGGATGGAAATCTAACCACTCT 58.888 43.478 0.00 0.00 39.06 3.24
2578 2614 4.164221 TGGGATGGAAATCTAACCACTCTC 59.836 45.833 0.00 0.00 39.06 3.20
2579 2615 4.445019 GGGATGGAAATCTAACCACTCTCC 60.445 50.000 0.00 0.00 39.06 3.71
2580 2616 4.164221 GGATGGAAATCTAACCACTCTCCA 59.836 45.833 0.00 0.00 39.06 3.86
2581 2617 4.553330 TGGAAATCTAACCACTCTCCAC 57.447 45.455 0.00 0.00 0.00 4.02
2582 2618 3.056107 TGGAAATCTAACCACTCTCCACG 60.056 47.826 0.00 0.00 0.00 4.94
2583 2619 3.194968 GGAAATCTAACCACTCTCCACGA 59.805 47.826 0.00 0.00 0.00 4.35
2584 2620 4.141914 GGAAATCTAACCACTCTCCACGAT 60.142 45.833 0.00 0.00 0.00 3.73
2585 2621 4.392921 AATCTAACCACTCTCCACGATG 57.607 45.455 0.00 0.00 0.00 3.84
2586 2622 2.803956 TCTAACCACTCTCCACGATGT 58.196 47.619 0.00 0.00 0.00 3.06
2587 2623 2.753452 TCTAACCACTCTCCACGATGTC 59.247 50.000 0.00 0.00 0.00 3.06
2588 2624 0.608640 AACCACTCTCCACGATGTCC 59.391 55.000 0.00 0.00 0.00 4.02
2589 2625 0.251832 ACCACTCTCCACGATGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
2590 2626 0.457851 CCACTCTCCACGATGTCCTC 59.542 60.000 0.00 0.00 0.00 3.71
2591 2627 1.177401 CACTCTCCACGATGTCCTCA 58.823 55.000 0.00 0.00 0.00 3.86
2592 2628 1.135257 CACTCTCCACGATGTCCTCAC 60.135 57.143 0.00 0.00 0.00 3.51
2593 2629 0.099613 CTCTCCACGATGTCCTCACG 59.900 60.000 0.00 0.00 0.00 4.35
2594 2630 0.608308 TCTCCACGATGTCCTCACGT 60.608 55.000 0.00 0.00 40.87 4.49
2597 2633 3.366629 ACGATGTCCTCACGTGCT 58.633 55.556 11.67 0.00 38.79 4.40
2598 2634 1.666011 ACGATGTCCTCACGTGCTT 59.334 52.632 11.67 0.00 38.79 3.91
2599 2635 0.388649 ACGATGTCCTCACGTGCTTC 60.389 55.000 11.67 3.85 38.79 3.86
2600 2636 0.109086 CGATGTCCTCACGTGCTTCT 60.109 55.000 11.67 0.00 0.00 2.85
2601 2637 1.634702 GATGTCCTCACGTGCTTCTC 58.365 55.000 11.67 0.80 0.00 2.87
2602 2638 1.203523 GATGTCCTCACGTGCTTCTCT 59.796 52.381 11.67 0.00 0.00 3.10
2603 2639 1.040646 TGTCCTCACGTGCTTCTCTT 58.959 50.000 11.67 0.00 0.00 2.85
2604 2640 1.269778 TGTCCTCACGTGCTTCTCTTG 60.270 52.381 11.67 0.00 0.00 3.02
2605 2641 1.000163 GTCCTCACGTGCTTCTCTTGA 60.000 52.381 11.67 0.00 0.00 3.02
2606 2642 1.686587 TCCTCACGTGCTTCTCTTGAA 59.313 47.619 11.67 0.00 0.00 2.69
2607 2643 2.102420 TCCTCACGTGCTTCTCTTGAAA 59.898 45.455 11.67 0.00 0.00 2.69
2608 2644 2.221981 CCTCACGTGCTTCTCTTGAAAC 59.778 50.000 11.67 0.00 0.00 2.78
2609 2645 2.866156 CTCACGTGCTTCTCTTGAAACA 59.134 45.455 11.67 0.00 0.00 2.83
2610 2646 2.866156 TCACGTGCTTCTCTTGAAACAG 59.134 45.455 11.67 0.00 30.07 3.16
2611 2647 2.032549 CACGTGCTTCTCTTGAAACAGG 60.033 50.000 0.82 0.00 38.98 4.00
2612 2648 2.158957 ACGTGCTTCTCTTGAAACAGGA 60.159 45.455 8.27 0.00 36.71 3.86
2613 2649 3.070018 CGTGCTTCTCTTGAAACAGGAT 58.930 45.455 0.00 0.00 36.71 3.24
2614 2650 3.499918 CGTGCTTCTCTTGAAACAGGATT 59.500 43.478 0.00 0.00 36.71 3.01
2615 2651 4.023707 CGTGCTTCTCTTGAAACAGGATTT 60.024 41.667 0.00 0.00 36.71 2.17
2616 2652 5.506317 CGTGCTTCTCTTGAAACAGGATTTT 60.506 40.000 0.00 0.00 36.71 1.82
2617 2653 5.689068 GTGCTTCTCTTGAAACAGGATTTTG 59.311 40.000 0.00 0.00 30.07 2.44
2618 2654 5.360714 TGCTTCTCTTGAAACAGGATTTTGT 59.639 36.000 0.00 0.00 0.00 2.83
2619 2655 5.917447 GCTTCTCTTGAAACAGGATTTTGTC 59.083 40.000 0.00 0.00 0.00 3.18
2632 2668 5.767816 GGATTTTGTCCCGCTTTATATGT 57.232 39.130 0.00 0.00 41.50 2.29
2633 2669 6.870971 GGATTTTGTCCCGCTTTATATGTA 57.129 37.500 0.00 0.00 41.50 2.29
2634 2670 7.266922 GGATTTTGTCCCGCTTTATATGTAA 57.733 36.000 0.00 0.00 41.50 2.41
2635 2671 7.708998 GGATTTTGTCCCGCTTTATATGTAAA 58.291 34.615 0.00 0.00 41.50 2.01
2636 2672 7.860872 GGATTTTGTCCCGCTTTATATGTAAAG 59.139 37.037 15.53 15.53 43.40 1.85
2656 2692 9.217278 TGTAAAGCAATAACCGAATAAAGTACA 57.783 29.630 0.00 0.00 0.00 2.90
2657 2693 9.481800 GTAAAGCAATAACCGAATAAAGTACAC 57.518 33.333 0.00 0.00 0.00 2.90
2658 2694 6.340537 AGCAATAACCGAATAAAGTACACG 57.659 37.500 0.00 0.00 0.00 4.49
2660 2696 5.495502 CAATAACCGAATAAAGTACACGGC 58.504 41.667 0.00 0.00 46.18 5.68
2661 2697 2.014335 ACCGAATAAAGTACACGGCC 57.986 50.000 0.00 0.00 46.18 6.13
2662 2698 1.292992 CCGAATAAAGTACACGGCCC 58.707 55.000 0.00 0.00 37.32 5.80
2663 2699 1.405797 CCGAATAAAGTACACGGCCCA 60.406 52.381 0.00 0.00 37.32 5.36
2664 2700 2.557317 CGAATAAAGTACACGGCCCAT 58.443 47.619 0.00 0.00 0.00 4.00
2665 2701 2.542595 CGAATAAAGTACACGGCCCATC 59.457 50.000 0.00 0.00 0.00 3.51
2666 2702 2.234300 ATAAAGTACACGGCCCATCG 57.766 50.000 0.00 0.00 0.00 3.84
2667 2703 1.184431 TAAAGTACACGGCCCATCGA 58.816 50.000 0.00 0.00 0.00 3.59
2668 2704 0.539986 AAAGTACACGGCCCATCGAT 59.460 50.000 0.00 0.00 0.00 3.59
2669 2705 1.405872 AAGTACACGGCCCATCGATA 58.594 50.000 0.00 0.00 0.00 2.92
2670 2706 0.672342 AGTACACGGCCCATCGATAC 59.328 55.000 0.00 0.00 0.00 2.24
2671 2707 0.386476 GTACACGGCCCATCGATACA 59.614 55.000 0.00 0.00 0.00 2.29
2672 2708 1.112950 TACACGGCCCATCGATACAA 58.887 50.000 0.00 0.00 0.00 2.41
2673 2709 0.250793 ACACGGCCCATCGATACAAA 59.749 50.000 0.00 0.00 0.00 2.83
2674 2710 1.339247 ACACGGCCCATCGATACAAAA 60.339 47.619 0.00 0.00 0.00 2.44
2675 2711 1.946768 CACGGCCCATCGATACAAAAT 59.053 47.619 0.00 0.00 0.00 1.82
2676 2712 1.946768 ACGGCCCATCGATACAAAATG 59.053 47.619 0.00 0.00 0.00 2.32
2677 2713 2.217750 CGGCCCATCGATACAAAATGA 58.782 47.619 0.00 0.00 0.00 2.57
2678 2714 2.813754 CGGCCCATCGATACAAAATGAT 59.186 45.455 0.00 0.00 0.00 2.45
2679 2715 3.365264 CGGCCCATCGATACAAAATGATG 60.365 47.826 0.00 0.00 38.32 3.07
2685 2721 6.486253 CATCGATACAAAATGATGGGGTAG 57.514 41.667 0.00 0.00 35.66 3.18
2686 2722 4.385825 TCGATACAAAATGATGGGGTAGC 58.614 43.478 0.00 0.00 0.00 3.58
2687 2723 3.502211 CGATACAAAATGATGGGGTAGCC 59.498 47.826 1.07 1.07 0.00 3.93
2688 2724 2.159179 ACAAAATGATGGGGTAGCCC 57.841 50.000 23.81 23.81 44.51 5.19
2689 2725 1.645919 ACAAAATGATGGGGTAGCCCT 59.354 47.619 29.64 15.83 44.66 5.19
2690 2726 2.310538 CAAAATGATGGGGTAGCCCTC 58.689 52.381 29.64 22.78 44.66 4.30
2691 2727 0.853530 AAATGATGGGGTAGCCCTCC 59.146 55.000 29.64 20.59 44.66 4.30
2692 2728 0.028642 AATGATGGGGTAGCCCTCCT 60.029 55.000 29.64 14.97 44.66 3.69
2693 2729 0.874594 ATGATGGGGTAGCCCTCCTA 59.125 55.000 29.64 10.96 44.66 2.94
2694 2730 0.105142 TGATGGGGTAGCCCTCCTAC 60.105 60.000 29.64 16.04 44.66 3.18
2695 2731 0.105142 GATGGGGTAGCCCTCCTACA 60.105 60.000 29.64 9.78 46.73 2.74
2696 2732 0.345502 ATGGGGTAGCCCTCCTACAA 59.654 55.000 29.64 9.00 46.73 2.41
2697 2733 0.345502 TGGGGTAGCCCTCCTACAAT 59.654 55.000 29.64 0.00 46.73 2.71
2698 2734 0.765510 GGGGTAGCCCTCCTACAATG 59.234 60.000 23.31 0.00 46.73 2.82
2699 2735 0.108774 GGGTAGCCCTCCTACAATGC 59.891 60.000 0.00 0.00 46.73 3.56
2700 2736 0.108774 GGTAGCCCTCCTACAATGCC 59.891 60.000 3.27 0.00 46.73 4.40
2701 2737 0.249911 GTAGCCCTCCTACAATGCCG 60.250 60.000 0.00 0.00 44.75 5.69
2702 2738 0.397957 TAGCCCTCCTACAATGCCGA 60.398 55.000 0.00 0.00 0.00 5.54
2703 2739 1.056700 AGCCCTCCTACAATGCCGAT 61.057 55.000 0.00 0.00 0.00 4.18
2704 2740 0.179018 GCCCTCCTACAATGCCGATT 60.179 55.000 0.00 0.00 0.00 3.34
2705 2741 1.884235 CCCTCCTACAATGCCGATTC 58.116 55.000 0.00 0.00 0.00 2.52
2706 2742 1.543429 CCCTCCTACAATGCCGATTCC 60.543 57.143 0.00 0.00 0.00 3.01
2707 2743 1.140852 CCTCCTACAATGCCGATTCCA 59.859 52.381 0.00 0.00 0.00 3.53
2708 2744 2.487934 CTCCTACAATGCCGATTCCAG 58.512 52.381 0.00 0.00 0.00 3.86
2709 2745 1.837439 TCCTACAATGCCGATTCCAGT 59.163 47.619 0.00 0.00 0.00 4.00
2710 2746 3.035363 TCCTACAATGCCGATTCCAGTA 58.965 45.455 0.00 0.00 0.00 2.74
2711 2747 3.646162 TCCTACAATGCCGATTCCAGTAT 59.354 43.478 0.00 0.00 0.00 2.12
2712 2748 4.836175 TCCTACAATGCCGATTCCAGTATA 59.164 41.667 0.00 0.00 0.00 1.47
2713 2749 5.305902 TCCTACAATGCCGATTCCAGTATAA 59.694 40.000 0.00 0.00 0.00 0.98
2714 2750 5.408604 CCTACAATGCCGATTCCAGTATAAC 59.591 44.000 0.00 0.00 0.00 1.89
2715 2751 4.776349 ACAATGCCGATTCCAGTATAACA 58.224 39.130 0.00 0.00 0.00 2.41
2716 2752 4.816385 ACAATGCCGATTCCAGTATAACAG 59.184 41.667 0.00 0.00 0.00 3.16
2717 2753 4.955811 ATGCCGATTCCAGTATAACAGA 57.044 40.909 0.00 0.00 0.00 3.41
2718 2754 4.955811 TGCCGATTCCAGTATAACAGAT 57.044 40.909 0.00 0.00 0.00 2.90
2719 2755 5.290493 TGCCGATTCCAGTATAACAGATT 57.710 39.130 0.00 0.00 0.00 2.40
2720 2756 5.297547 TGCCGATTCCAGTATAACAGATTC 58.702 41.667 0.00 0.00 0.00 2.52
2721 2757 5.163353 TGCCGATTCCAGTATAACAGATTCA 60.163 40.000 0.00 0.00 0.00 2.57
2722 2758 5.177696 GCCGATTCCAGTATAACAGATTCAC 59.822 44.000 0.00 0.00 0.00 3.18
2723 2759 5.402568 CCGATTCCAGTATAACAGATTCACG 59.597 44.000 0.00 0.00 0.00 4.35
2724 2760 5.107837 CGATTCCAGTATAACAGATTCACGC 60.108 44.000 0.00 0.00 0.00 5.34
2725 2761 4.729227 TCCAGTATAACAGATTCACGCA 57.271 40.909 0.00 0.00 0.00 5.24
2726 2762 4.682787 TCCAGTATAACAGATTCACGCAG 58.317 43.478 0.00 0.00 0.00 5.18
2727 2763 4.401202 TCCAGTATAACAGATTCACGCAGA 59.599 41.667 0.00 0.00 0.00 4.26
2728 2764 5.105513 TCCAGTATAACAGATTCACGCAGAA 60.106 40.000 0.00 0.00 41.28 3.02
2730 2766 6.292542 CCAGTATAACAGATTCACGCAGAATG 60.293 42.308 8.26 0.41 46.76 2.67
2743 2779 1.559831 CAGAATGCATGCGACTACGA 58.440 50.000 14.09 0.00 42.66 3.43
2744 2780 2.130395 CAGAATGCATGCGACTACGAT 58.870 47.619 14.09 0.00 42.66 3.73
2745 2781 3.308530 CAGAATGCATGCGACTACGATA 58.691 45.455 14.09 0.00 42.66 2.92
2746 2782 3.120286 CAGAATGCATGCGACTACGATAC 59.880 47.826 14.09 0.00 42.66 2.24
2747 2783 2.065993 ATGCATGCGACTACGATACC 57.934 50.000 14.09 0.00 42.66 2.73
2748 2784 0.317519 TGCATGCGACTACGATACCG 60.318 55.000 14.09 0.00 42.66 4.02
2749 2785 0.040692 GCATGCGACTACGATACCGA 60.041 55.000 0.00 0.00 42.66 4.69
2750 2786 1.598676 GCATGCGACTACGATACCGAA 60.599 52.381 0.00 0.00 42.66 4.30
2751 2787 2.723209 CATGCGACTACGATACCGAAA 58.277 47.619 0.00 0.00 42.66 3.46
2752 2788 2.463553 TGCGACTACGATACCGAAAG 57.536 50.000 0.00 0.00 42.66 2.62
2753 2789 2.009051 TGCGACTACGATACCGAAAGA 58.991 47.619 0.00 0.00 42.66 2.52
2754 2790 2.031314 TGCGACTACGATACCGAAAGAG 59.969 50.000 0.00 0.00 42.66 2.85
2755 2791 2.286294 GCGACTACGATACCGAAAGAGA 59.714 50.000 0.00 0.00 42.66 3.10
2756 2792 3.242543 GCGACTACGATACCGAAAGAGAA 60.243 47.826 0.00 0.00 42.66 2.87
2757 2793 4.728882 GCGACTACGATACCGAAAGAGAAA 60.729 45.833 0.00 0.00 42.66 2.52
2758 2794 4.962751 CGACTACGATACCGAAAGAGAAAG 59.037 45.833 0.00 0.00 42.66 2.62
2759 2795 5.220548 CGACTACGATACCGAAAGAGAAAGA 60.221 44.000 0.00 0.00 42.66 2.52
2760 2796 6.506500 ACTACGATACCGAAAGAGAAAGAA 57.493 37.500 0.00 0.00 39.50 2.52
2761 2797 6.320944 ACTACGATACCGAAAGAGAAAGAAC 58.679 40.000 0.00 0.00 39.50 3.01
2762 2798 5.388408 ACGATACCGAAAGAGAAAGAACT 57.612 39.130 0.00 0.00 39.50 3.01
2763 2799 5.162075 ACGATACCGAAAGAGAAAGAACTG 58.838 41.667 0.00 0.00 39.50 3.16
2764 2800 5.048224 ACGATACCGAAAGAGAAAGAACTGA 60.048 40.000 0.00 0.00 39.50 3.41
2765 2801 5.513495 CGATACCGAAAGAGAAAGAACTGAG 59.487 44.000 0.00 0.00 38.22 3.35
2766 2802 4.674281 ACCGAAAGAGAAAGAACTGAGT 57.326 40.909 0.00 0.00 0.00 3.41
2767 2803 5.786264 ACCGAAAGAGAAAGAACTGAGTA 57.214 39.130 0.00 0.00 0.00 2.59
2768 2804 5.530712 ACCGAAAGAGAAAGAACTGAGTAC 58.469 41.667 0.00 0.00 0.00 2.73
2769 2805 5.068723 ACCGAAAGAGAAAGAACTGAGTACA 59.931 40.000 0.00 0.00 0.00 2.90
2770 2806 5.983720 CCGAAAGAGAAAGAACTGAGTACAA 59.016 40.000 0.00 0.00 0.00 2.41
2771 2807 6.647067 CCGAAAGAGAAAGAACTGAGTACAAT 59.353 38.462 0.00 0.00 0.00 2.71
2772 2808 7.359598 CCGAAAGAGAAAGAACTGAGTACAATG 60.360 40.741 0.00 0.00 0.00 2.82
2773 2809 7.169982 CGAAAGAGAAAGAACTGAGTACAATGT 59.830 37.037 0.00 0.00 0.00 2.71
2774 2810 7.954788 AAGAGAAAGAACTGAGTACAATGTC 57.045 36.000 0.00 0.00 0.00 3.06
2775 2811 7.055667 AGAGAAAGAACTGAGTACAATGTCA 57.944 36.000 0.00 0.00 0.00 3.58
2776 2812 6.926272 AGAGAAAGAACTGAGTACAATGTCAC 59.074 38.462 0.00 0.00 0.00 3.67
2777 2813 5.692204 AGAAAGAACTGAGTACAATGTCACG 59.308 40.000 0.00 0.00 0.00 4.35
2778 2814 3.318017 AGAACTGAGTACAATGTCACGC 58.682 45.455 0.00 0.00 0.00 5.34
2779 2815 3.005897 AGAACTGAGTACAATGTCACGCT 59.994 43.478 0.00 0.00 0.00 5.07
2780 2816 4.217767 AGAACTGAGTACAATGTCACGCTA 59.782 41.667 0.00 0.00 0.00 4.26
2781 2817 3.834610 ACTGAGTACAATGTCACGCTAC 58.165 45.455 0.00 0.00 0.00 3.58
2782 2818 2.846550 CTGAGTACAATGTCACGCTACG 59.153 50.000 0.00 0.00 0.00 3.51
2783 2819 1.582502 GAGTACAATGTCACGCTACGC 59.417 52.381 0.00 0.00 0.00 4.42
2784 2820 1.068125 AGTACAATGTCACGCTACGCA 60.068 47.619 0.00 0.00 0.00 5.24
2785 2821 1.058695 GTACAATGTCACGCTACGCAC 59.941 52.381 0.00 0.00 0.00 5.34
2786 2822 0.319555 ACAATGTCACGCTACGCACT 60.320 50.000 0.00 0.00 0.00 4.40
2787 2823 1.068125 ACAATGTCACGCTACGCACTA 60.068 47.619 0.00 0.00 0.00 2.74
2788 2824 2.193447 CAATGTCACGCTACGCACTAT 58.807 47.619 0.00 0.00 0.00 2.12
2789 2825 3.181494 ACAATGTCACGCTACGCACTATA 60.181 43.478 0.00 0.00 0.00 1.31
2790 2826 2.463553 TGTCACGCTACGCACTATAC 57.536 50.000 0.00 0.00 0.00 1.47
2791 2827 1.064505 TGTCACGCTACGCACTATACC 59.935 52.381 0.00 0.00 0.00 2.73
2792 2828 1.064505 GTCACGCTACGCACTATACCA 59.935 52.381 0.00 0.00 0.00 3.25
2793 2829 1.064505 TCACGCTACGCACTATACCAC 59.935 52.381 0.00 0.00 0.00 4.16
2794 2830 0.383231 ACGCTACGCACTATACCACC 59.617 55.000 0.00 0.00 0.00 4.61
2795 2831 0.666913 CGCTACGCACTATACCACCT 59.333 55.000 0.00 0.00 0.00 4.00
2796 2832 1.875514 CGCTACGCACTATACCACCTA 59.124 52.381 0.00 0.00 0.00 3.08
2797 2833 2.291465 CGCTACGCACTATACCACCTAA 59.709 50.000 0.00 0.00 0.00 2.69
2798 2834 3.608707 CGCTACGCACTATACCACCTAAG 60.609 52.174 0.00 0.00 0.00 2.18
2799 2835 2.884894 ACGCACTATACCACCTAAGC 57.115 50.000 0.00 0.00 0.00 3.09
2800 2836 2.385803 ACGCACTATACCACCTAAGCT 58.614 47.619 0.00 0.00 0.00 3.74
2801 2837 2.764572 ACGCACTATACCACCTAAGCTT 59.235 45.455 3.48 3.48 0.00 3.74
2802 2838 3.197116 ACGCACTATACCACCTAAGCTTT 59.803 43.478 3.20 0.00 0.00 3.51
2803 2839 3.555956 CGCACTATACCACCTAAGCTTTG 59.444 47.826 3.20 1.61 0.00 2.77
2804 2840 3.312697 GCACTATACCACCTAAGCTTTGC 59.687 47.826 3.20 0.00 0.00 3.68
2805 2841 3.555956 CACTATACCACCTAAGCTTTGCG 59.444 47.826 3.20 0.00 0.00 4.85
2806 2842 3.449737 ACTATACCACCTAAGCTTTGCGA 59.550 43.478 3.20 0.00 0.00 5.10
2807 2843 2.088950 TACCACCTAAGCTTTGCGAC 57.911 50.000 3.20 0.00 0.00 5.19
2808 2844 0.107831 ACCACCTAAGCTTTGCGACA 59.892 50.000 3.20 0.00 0.00 4.35
2809 2845 1.234821 CCACCTAAGCTTTGCGACAA 58.765 50.000 3.20 0.00 0.00 3.18
2810 2846 1.069227 CCACCTAAGCTTTGCGACAAC 60.069 52.381 3.20 0.00 0.00 3.32
2811 2847 0.865769 ACCTAAGCTTTGCGACAACG 59.134 50.000 3.20 0.00 42.93 4.10
2822 2858 2.513159 CGACAACGCCTTCGAAAGA 58.487 52.632 0.00 0.00 37.43 2.52
2823 2859 0.435008 CGACAACGCCTTCGAAAGAG 59.565 55.000 0.00 0.00 43.69 2.85
2824 2860 1.779569 GACAACGCCTTCGAAAGAGA 58.220 50.000 4.42 0.00 43.69 3.10
2825 2861 2.132762 GACAACGCCTTCGAAAGAGAA 58.867 47.619 4.42 0.00 43.69 2.87
2826 2862 2.542595 GACAACGCCTTCGAAAGAGAAA 59.457 45.455 4.42 0.00 43.69 2.52
2827 2863 2.940410 ACAACGCCTTCGAAAGAGAAAA 59.060 40.909 4.42 0.00 43.69 2.29
2828 2864 3.242641 ACAACGCCTTCGAAAGAGAAAAC 60.243 43.478 4.42 0.00 43.69 2.43
2829 2865 2.557317 ACGCCTTCGAAAGAGAAAACA 58.443 42.857 4.42 0.00 43.69 2.83
2830 2866 2.940410 ACGCCTTCGAAAGAGAAAACAA 59.060 40.909 4.42 0.00 43.69 2.83
2831 2867 3.242641 ACGCCTTCGAAAGAGAAAACAAC 60.243 43.478 4.42 0.00 43.69 3.32
2832 2868 3.289076 GCCTTCGAAAGAGAAAACAACG 58.711 45.455 0.00 0.00 43.69 4.10
2833 2869 3.289076 CCTTCGAAAGAGAAAACAACGC 58.711 45.455 0.00 0.00 43.69 4.84
2834 2870 3.242608 CCTTCGAAAGAGAAAACAACGCA 60.243 43.478 0.00 0.00 43.69 5.24
2835 2871 4.339429 CTTCGAAAGAGAAAACAACGCAA 58.661 39.130 0.00 0.00 43.69 4.85
2836 2872 4.343811 TCGAAAGAGAAAACAACGCAAA 57.656 36.364 0.00 0.00 34.84 3.68
2837 2873 4.339429 TCGAAAGAGAAAACAACGCAAAG 58.661 39.130 0.00 0.00 34.84 2.77
2838 2874 3.061863 CGAAAGAGAAAACAACGCAAAGC 60.062 43.478 0.00 0.00 0.00 3.51
2849 2885 3.741058 GCAAAGCGTCATCGTTGC 58.259 55.556 0.00 0.00 40.07 4.17
2850 2886 1.797537 GCAAAGCGTCATCGTTGCC 60.798 57.895 3.65 0.00 40.58 4.52
2851 2887 1.509787 CAAAGCGTCATCGTTGCCG 60.510 57.895 0.00 0.00 39.49 5.69
2861 2897 2.895039 TCGTTGCCGAGTCAAGAAC 58.105 52.632 0.00 0.00 38.40 3.01
2862 2898 0.103390 TCGTTGCCGAGTCAAGAACA 59.897 50.000 0.00 0.00 38.40 3.18
2863 2899 0.508641 CGTTGCCGAGTCAAGAACAG 59.491 55.000 0.00 0.00 35.63 3.16
2864 2900 1.865865 GTTGCCGAGTCAAGAACAGA 58.134 50.000 0.00 0.00 0.00 3.41
2865 2901 1.527311 GTTGCCGAGTCAAGAACAGAC 59.473 52.381 0.00 0.00 36.26 3.51
2866 2902 0.750249 TGCCGAGTCAAGAACAGACA 59.250 50.000 0.00 0.00 38.46 3.41
2867 2903 1.138069 TGCCGAGTCAAGAACAGACAA 59.862 47.619 0.00 0.00 38.46 3.18
2868 2904 1.795286 GCCGAGTCAAGAACAGACAAG 59.205 52.381 0.00 0.00 38.46 3.16
2869 2905 2.408050 CCGAGTCAAGAACAGACAAGG 58.592 52.381 0.00 0.00 38.46 3.61
2870 2906 2.408050 CGAGTCAAGAACAGACAAGGG 58.592 52.381 0.00 0.00 38.46 3.95
2871 2907 2.772287 GAGTCAAGAACAGACAAGGGG 58.228 52.381 0.00 0.00 38.46 4.79
2872 2908 1.202818 AGTCAAGAACAGACAAGGGGC 60.203 52.381 0.00 0.00 38.46 5.80
2873 2909 1.140312 TCAAGAACAGACAAGGGGCT 58.860 50.000 0.00 0.00 0.00 5.19
2874 2910 1.494721 TCAAGAACAGACAAGGGGCTT 59.505 47.619 0.00 0.00 0.00 4.35
2875 2911 2.708861 TCAAGAACAGACAAGGGGCTTA 59.291 45.455 0.00 0.00 0.00 3.09
2876 2912 3.137544 TCAAGAACAGACAAGGGGCTTAA 59.862 43.478 0.00 0.00 0.00 1.85
2877 2913 3.141767 AGAACAGACAAGGGGCTTAAC 57.858 47.619 0.00 0.00 0.00 2.01
2878 2914 2.160205 GAACAGACAAGGGGCTTAACC 58.840 52.381 0.00 0.00 37.93 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
146 148 4.156922 ACCAGTGAATCTTCTCTCTACACG 59.843 45.833 0.00 0.00 33.00 4.49
149 151 5.906113 TCACCAGTGAATCTTCTCTCTAC 57.094 43.478 0.00 0.00 36.53 2.59
178 180 4.065088 ACAACATTCGTGACAGCAACTAT 58.935 39.130 0.00 0.00 0.00 2.12
251 253 4.715534 TTGGTAGTCAAATTGGGTGAGA 57.284 40.909 0.00 0.00 31.46 3.27
321 323 7.717568 ACGTTTATCTAGCATCTCATGTACTT 58.282 34.615 0.00 0.00 0.00 2.24
360 362 5.518847 TCACGATGTAGCTGTGCTTTTATAC 59.481 40.000 0.00 0.00 40.44 1.47
368 370 1.428448 TTGTCACGATGTAGCTGTGC 58.572 50.000 0.00 0.00 33.69 4.57
427 431 4.273235 GCTAAAAAGGCAAGCACAAATGTT 59.727 37.500 0.00 0.00 36.26 2.71
475 488 0.109723 TTGGTGAGAAAAGGGTCCGG 59.890 55.000 0.00 0.00 0.00 5.14
477 490 4.028993 TGTATTGGTGAGAAAAGGGTCC 57.971 45.455 0.00 0.00 0.00 4.46
558 575 7.338449 TGAACAAGGCCACCTATTTTATTCTAC 59.662 37.037 5.01 0.00 31.13 2.59
609 629 2.928757 GTGCTAGAGAACAGTGATGCAG 59.071 50.000 0.00 0.00 0.00 4.41
1149 1170 3.441163 CCCTTGCATCATTTCACAATCG 58.559 45.455 0.00 0.00 0.00 3.34
1170 1191 3.624410 TGCGCATGAATCATGATATAGCC 59.376 43.478 25.77 6.11 43.81 3.93
1179 1200 4.576879 AGAGATACATGCGCATGAATCAT 58.423 39.130 46.90 33.01 41.20 2.45
1180 1201 3.999046 AGAGATACATGCGCATGAATCA 58.001 40.909 46.90 30.57 41.20 2.57
1181 1202 4.450080 TGAAGAGATACATGCGCATGAATC 59.550 41.667 46.90 34.89 41.20 2.52
1182 1203 4.383173 TGAAGAGATACATGCGCATGAAT 58.617 39.130 46.90 31.97 41.20 2.57
1183 1204 3.795877 TGAAGAGATACATGCGCATGAA 58.204 40.909 46.90 21.84 41.20 2.57
1184 1205 3.068590 TCTGAAGAGATACATGCGCATGA 59.931 43.478 46.90 32.69 41.20 3.07
1185 1206 3.387397 TCTGAAGAGATACATGCGCATG 58.613 45.455 41.02 41.02 44.15 4.06
1268 1289 2.919856 AGTGCAGACGCCACTCCT 60.920 61.111 0.00 0.00 37.32 3.69
1403 1425 4.224433 GTGAACAACTGAACATGATGCAG 58.776 43.478 0.00 6.20 35.81 4.41
1493 1516 2.736826 CCCGCTCTCCTTTCCCCTC 61.737 68.421 0.00 0.00 0.00 4.30
1664 1687 1.860950 CGTACGGAGGCAATCTTGATG 59.139 52.381 7.57 0.00 0.00 3.07
1843 1866 5.398603 TTTGCGGTATTCATGTTTCCATT 57.601 34.783 0.00 0.00 0.00 3.16
2020 2043 0.099436 GGATGGCAAAGTGCTAAGCG 59.901 55.000 0.00 0.00 44.28 4.68
2041 2065 1.418637 TCACTACCAAACCACCTGACC 59.581 52.381 0.00 0.00 0.00 4.02
2042 2066 2.922740 TCACTACCAAACCACCTGAC 57.077 50.000 0.00 0.00 0.00 3.51
2043 2067 5.772393 AATATCACTACCAAACCACCTGA 57.228 39.130 0.00 0.00 0.00 3.86
2044 2068 6.659242 AGAAAATATCACTACCAAACCACCTG 59.341 38.462 0.00 0.00 0.00 4.00
2045 2069 6.659242 CAGAAAATATCACTACCAAACCACCT 59.341 38.462 0.00 0.00 0.00 4.00
2053 2077 4.640201 GCAAGCCAGAAAATATCACTACCA 59.360 41.667 0.00 0.00 0.00 3.25
2135 2170 6.951062 TGTCAGTATTCACAAAAATGGACA 57.049 33.333 0.00 0.00 0.00 4.02
2137 2172 9.474920 GAATTTGTCAGTATTCACAAAAATGGA 57.525 29.630 1.64 0.00 43.79 3.41
2165 2200 1.526575 AATGAGTTGGCTGTTGGGCG 61.527 55.000 0.00 0.00 44.11 6.13
2169 2204 4.067896 ACACTAGAATGAGTTGGCTGTTG 58.932 43.478 0.00 0.00 0.00 3.33
2170 2205 4.040952 AGACACTAGAATGAGTTGGCTGTT 59.959 41.667 0.00 0.00 0.00 3.16
2171 2206 3.580458 AGACACTAGAATGAGTTGGCTGT 59.420 43.478 0.00 0.00 0.00 4.40
2172 2207 4.180057 GAGACACTAGAATGAGTTGGCTG 58.820 47.826 0.00 0.00 0.00 4.85
2173 2208 3.119316 CGAGACACTAGAATGAGTTGGCT 60.119 47.826 0.00 0.00 0.00 4.75
2174 2209 3.119459 TCGAGACACTAGAATGAGTTGGC 60.119 47.826 0.00 0.00 0.00 4.52
2185 2220 7.119553 ACCTAAAAGTACTCTTCGAGACACTAG 59.880 40.741 0.00 0.00 31.94 2.57
2229 2264 4.422840 CATTTCATTGATGCAAACCGCTA 58.577 39.130 0.00 0.00 43.06 4.26
2239 2274 4.220724 ACCTCCATCCCATTTCATTGATG 58.779 43.478 0.00 0.00 35.49 3.07
2240 2275 4.547886 ACCTCCATCCCATTTCATTGAT 57.452 40.909 0.00 0.00 0.00 2.57
2279 2315 2.101582 ACTTGACGCTCCATGATACTCC 59.898 50.000 0.00 0.00 0.00 3.85
2296 2332 5.491982 ACAGAAGGAGTAAATGCCTACTTG 58.508 41.667 0.00 0.00 33.17 3.16
2299 2335 6.174049 AGAAACAGAAGGAGTAAATGCCTAC 58.826 40.000 0.00 0.00 33.20 3.18
2387 2423 9.649024 CGAAGCAAAACAAATGAATTTACATTT 57.351 25.926 0.00 0.00 46.85 2.32
2388 2424 8.825745 ACGAAGCAAAACAAATGAATTTACATT 58.174 25.926 0.00 0.00 41.43 2.71
2389 2425 8.364129 ACGAAGCAAAACAAATGAATTTACAT 57.636 26.923 0.00 0.00 0.00 2.29
2394 2430 7.945033 ACATACGAAGCAAAACAAATGAATT 57.055 28.000 0.00 0.00 0.00 2.17
2403 2439 5.627172 TGCAGATTACATACGAAGCAAAAC 58.373 37.500 0.00 0.00 0.00 2.43
2412 2448 5.277490 CCTGTTCCAATGCAGATTACATACG 60.277 44.000 0.00 0.00 34.87 3.06
2420 2456 1.637553 ACTCCCTGTTCCAATGCAGAT 59.362 47.619 0.00 0.00 34.87 2.90
2421 2457 1.067295 ACTCCCTGTTCCAATGCAGA 58.933 50.000 0.00 0.00 34.87 4.26
2422 2458 2.636830 CTACTCCCTGTTCCAATGCAG 58.363 52.381 0.00 0.00 0.00 4.41
2423 2459 1.340017 GCTACTCCCTGTTCCAATGCA 60.340 52.381 0.00 0.00 0.00 3.96
2424 2460 1.065126 AGCTACTCCCTGTTCCAATGC 60.065 52.381 0.00 0.00 0.00 3.56
2425 2461 4.192317 GTTAGCTACTCCCTGTTCCAATG 58.808 47.826 0.00 0.00 0.00 2.82
2426 2462 3.844211 TGTTAGCTACTCCCTGTTCCAAT 59.156 43.478 0.00 0.00 0.00 3.16
2427 2463 3.244582 TGTTAGCTACTCCCTGTTCCAA 58.755 45.455 0.00 0.00 0.00 3.53
2428 2464 2.832129 CTGTTAGCTACTCCCTGTTCCA 59.168 50.000 0.00 0.00 0.00 3.53
2429 2465 2.418884 GCTGTTAGCTACTCCCTGTTCC 60.419 54.545 0.00 0.00 38.45 3.62
2430 2466 2.233922 TGCTGTTAGCTACTCCCTGTTC 59.766 50.000 0.00 0.00 42.97 3.18
2431 2467 2.257207 TGCTGTTAGCTACTCCCTGTT 58.743 47.619 0.00 0.00 42.97 3.16
2432 2468 1.938585 TGCTGTTAGCTACTCCCTGT 58.061 50.000 0.00 0.00 42.97 4.00
2433 2469 2.028112 TGTTGCTGTTAGCTACTCCCTG 60.028 50.000 14.46 0.00 45.07 4.45
2434 2470 2.257207 TGTTGCTGTTAGCTACTCCCT 58.743 47.619 14.46 0.00 45.07 4.20
2435 2471 2.762535 TGTTGCTGTTAGCTACTCCC 57.237 50.000 14.46 0.00 45.07 4.30
2436 2472 5.393962 CATTTTGTTGCTGTTAGCTACTCC 58.606 41.667 14.46 0.00 45.07 3.85
2437 2473 4.853743 GCATTTTGTTGCTGTTAGCTACTC 59.146 41.667 14.46 0.00 45.07 2.59
2438 2474 4.321230 GGCATTTTGTTGCTGTTAGCTACT 60.321 41.667 14.46 0.00 45.07 2.57
2439 2475 3.920412 GGCATTTTGTTGCTGTTAGCTAC 59.080 43.478 8.16 8.16 45.06 3.58
2440 2476 3.826157 AGGCATTTTGTTGCTGTTAGCTA 59.174 39.130 2.24 0.00 42.97 3.32
2441 2477 2.629617 AGGCATTTTGTTGCTGTTAGCT 59.370 40.909 2.24 0.00 42.97 3.32
2442 2478 3.030668 AGGCATTTTGTTGCTGTTAGC 57.969 42.857 0.00 0.00 42.38 3.09
2443 2479 3.184986 GCAAGGCATTTTGTTGCTGTTAG 59.815 43.478 0.00 0.00 42.70 2.34
2444 2480 3.129871 GCAAGGCATTTTGTTGCTGTTA 58.870 40.909 0.00 0.00 42.70 2.41
2445 2481 1.941975 GCAAGGCATTTTGTTGCTGTT 59.058 42.857 0.00 0.00 42.70 3.16
2446 2482 1.585297 GCAAGGCATTTTGTTGCTGT 58.415 45.000 0.00 0.00 42.70 4.40
2447 2483 0.869730 GGCAAGGCATTTTGTTGCTG 59.130 50.000 6.27 0.00 44.87 4.41
2448 2484 0.469070 TGGCAAGGCATTTTGTTGCT 59.531 45.000 6.27 0.00 44.87 3.91
2449 2485 0.587768 GTGGCAAGGCATTTTGTTGC 59.412 50.000 0.00 0.00 44.79 4.17
2450 2486 1.950828 TGTGGCAAGGCATTTTGTTG 58.049 45.000 0.00 0.00 0.00 3.33
2451 2487 2.496111 CATGTGGCAAGGCATTTTGTT 58.504 42.857 0.00 0.00 0.00 2.83
2452 2488 1.270947 CCATGTGGCAAGGCATTTTGT 60.271 47.619 0.00 0.00 0.00 2.83
2453 2489 1.270947 ACCATGTGGCAAGGCATTTTG 60.271 47.619 0.00 0.00 39.32 2.44
2454 2490 1.058284 ACCATGTGGCAAGGCATTTT 58.942 45.000 0.00 0.00 39.32 1.82
2455 2491 1.935799 TACCATGTGGCAAGGCATTT 58.064 45.000 0.00 0.00 39.32 2.32
2456 2492 1.935799 TTACCATGTGGCAAGGCATT 58.064 45.000 0.00 0.00 39.32 3.56
2457 2493 2.163810 ATTACCATGTGGCAAGGCAT 57.836 45.000 0.00 0.00 39.32 4.40
2458 2494 2.757868 GTTATTACCATGTGGCAAGGCA 59.242 45.455 0.00 0.00 39.32 4.75
2459 2495 2.757868 TGTTATTACCATGTGGCAAGGC 59.242 45.455 0.00 0.00 39.32 4.35
2460 2496 5.398603 TTTGTTATTACCATGTGGCAAGG 57.601 39.130 0.00 0.00 39.32 3.61
2461 2497 6.928492 ACTTTTTGTTATTACCATGTGGCAAG 59.072 34.615 0.00 0.00 39.32 4.01
2462 2498 6.821388 ACTTTTTGTTATTACCATGTGGCAA 58.179 32.000 0.00 0.00 39.32 4.52
2463 2499 6.412362 ACTTTTTGTTATTACCATGTGGCA 57.588 33.333 0.00 0.00 39.32 4.92
2464 2500 8.996024 AATACTTTTTGTTATTACCATGTGGC 57.004 30.769 0.00 0.00 39.32 5.01
2495 2531 4.820897 TCGCTCATCTTTCACATTAGTGT 58.179 39.130 0.00 0.00 46.01 3.55
2497 2533 5.521735 GTCATCGCTCATCTTTCACATTAGT 59.478 40.000 0.00 0.00 0.00 2.24
2498 2534 5.332130 CGTCATCGCTCATCTTTCACATTAG 60.332 44.000 0.00 0.00 0.00 1.73
2499 2535 4.504097 CGTCATCGCTCATCTTTCACATTA 59.496 41.667 0.00 0.00 0.00 1.90
2500 2536 3.308053 CGTCATCGCTCATCTTTCACATT 59.692 43.478 0.00 0.00 0.00 2.71
2501 2537 2.862536 CGTCATCGCTCATCTTTCACAT 59.137 45.455 0.00 0.00 0.00 3.21
2502 2538 2.262211 CGTCATCGCTCATCTTTCACA 58.738 47.619 0.00 0.00 0.00 3.58
2503 2539 2.263077 ACGTCATCGCTCATCTTTCAC 58.737 47.619 0.00 0.00 41.18 3.18
2504 2540 2.654749 ACGTCATCGCTCATCTTTCA 57.345 45.000 0.00 0.00 41.18 2.69
2505 2541 3.999229 AAACGTCATCGCTCATCTTTC 57.001 42.857 0.00 0.00 41.18 2.62
2506 2542 4.260375 GCATAAACGTCATCGCTCATCTTT 60.260 41.667 0.00 0.00 41.18 2.52
2507 2543 3.246226 GCATAAACGTCATCGCTCATCTT 59.754 43.478 0.00 0.00 41.18 2.40
2508 2544 2.797156 GCATAAACGTCATCGCTCATCT 59.203 45.455 0.00 0.00 41.18 2.90
2509 2545 2.539688 TGCATAAACGTCATCGCTCATC 59.460 45.455 0.00 0.00 41.18 2.92
2510 2546 2.541346 CTGCATAAACGTCATCGCTCAT 59.459 45.455 0.00 0.00 41.18 2.90
2511 2547 1.926510 CTGCATAAACGTCATCGCTCA 59.073 47.619 0.00 0.00 41.18 4.26
2512 2548 1.927174 ACTGCATAAACGTCATCGCTC 59.073 47.619 0.00 0.00 41.18 5.03
2513 2549 2.010145 ACTGCATAAACGTCATCGCT 57.990 45.000 0.00 0.00 41.18 4.93
2514 2550 2.218759 CCTACTGCATAAACGTCATCGC 59.781 50.000 0.00 0.00 41.18 4.58
2515 2551 3.702330 TCCTACTGCATAAACGTCATCG 58.298 45.455 0.00 0.00 43.34 3.84
2516 2552 5.289595 TGATCCTACTGCATAAACGTCATC 58.710 41.667 0.00 0.00 0.00 2.92
2517 2553 5.276461 TGATCCTACTGCATAAACGTCAT 57.724 39.130 0.00 0.00 0.00 3.06
2518 2554 4.729227 TGATCCTACTGCATAAACGTCA 57.271 40.909 0.00 0.00 0.00 4.35
2519 2555 5.006746 CCTTTGATCCTACTGCATAAACGTC 59.993 44.000 0.00 0.00 0.00 4.34
2520 2556 4.876107 CCTTTGATCCTACTGCATAAACGT 59.124 41.667 0.00 0.00 0.00 3.99
2521 2557 4.260784 GCCTTTGATCCTACTGCATAAACG 60.261 45.833 0.00 0.00 0.00 3.60
2522 2558 4.260784 CGCCTTTGATCCTACTGCATAAAC 60.261 45.833 0.00 0.00 0.00 2.01
2523 2559 3.876914 CGCCTTTGATCCTACTGCATAAA 59.123 43.478 0.00 0.00 0.00 1.40
2524 2560 3.466836 CGCCTTTGATCCTACTGCATAA 58.533 45.455 0.00 0.00 0.00 1.90
2525 2561 2.224281 CCGCCTTTGATCCTACTGCATA 60.224 50.000 0.00 0.00 0.00 3.14
2526 2562 1.475751 CCGCCTTTGATCCTACTGCAT 60.476 52.381 0.00 0.00 0.00 3.96
2527 2563 0.107703 CCGCCTTTGATCCTACTGCA 60.108 55.000 0.00 0.00 0.00 4.41
2528 2564 0.815615 CCCGCCTTTGATCCTACTGC 60.816 60.000 0.00 0.00 0.00 4.40
2529 2565 0.815615 GCCCGCCTTTGATCCTACTG 60.816 60.000 0.00 0.00 0.00 2.74
2530 2566 1.527370 GCCCGCCTTTGATCCTACT 59.473 57.895 0.00 0.00 0.00 2.57
2531 2567 1.887707 CGCCCGCCTTTGATCCTAC 60.888 63.158 0.00 0.00 0.00 3.18
2532 2568 2.306255 GACGCCCGCCTTTGATCCTA 62.306 60.000 0.00 0.00 0.00 2.94
2533 2569 3.682292 GACGCCCGCCTTTGATCCT 62.682 63.158 0.00 0.00 0.00 3.24
2534 2570 3.202706 GACGCCCGCCTTTGATCC 61.203 66.667 0.00 0.00 0.00 3.36
2535 2571 3.564027 CGACGCCCGCCTTTGATC 61.564 66.667 0.00 0.00 0.00 2.92
2536 2572 4.077184 TCGACGCCCGCCTTTGAT 62.077 61.111 0.00 0.00 38.37 2.57
2544 2580 4.873129 CATCCCAGTCGACGCCCG 62.873 72.222 10.46 0.03 40.25 6.13
2545 2581 4.530857 CCATCCCAGTCGACGCCC 62.531 72.222 10.46 0.00 0.00 6.13
2546 2582 2.515996 TTTCCATCCCAGTCGACGCC 62.516 60.000 10.46 0.00 0.00 5.68
2547 2583 0.462047 ATTTCCATCCCAGTCGACGC 60.462 55.000 10.46 0.00 0.00 5.19
2548 2584 1.137086 AGATTTCCATCCCAGTCGACG 59.863 52.381 10.46 5.16 0.00 5.12
2549 2585 2.990066 AGATTTCCATCCCAGTCGAC 57.010 50.000 7.70 7.70 0.00 4.20
2550 2586 3.134081 GGTTAGATTTCCATCCCAGTCGA 59.866 47.826 0.00 0.00 0.00 4.20
2551 2587 3.118408 TGGTTAGATTTCCATCCCAGTCG 60.118 47.826 0.00 0.00 0.00 4.18
2552 2588 4.080299 AGTGGTTAGATTTCCATCCCAGTC 60.080 45.833 0.00 0.00 36.09 3.51
2553 2589 3.852578 AGTGGTTAGATTTCCATCCCAGT 59.147 43.478 0.00 0.00 36.09 4.00
2554 2590 4.164988 AGAGTGGTTAGATTTCCATCCCAG 59.835 45.833 0.00 0.00 36.09 4.45
2555 2591 4.111577 AGAGTGGTTAGATTTCCATCCCA 58.888 43.478 0.00 0.00 36.09 4.37
2556 2592 4.445019 GGAGAGTGGTTAGATTTCCATCCC 60.445 50.000 0.00 0.00 36.09 3.85
2557 2593 4.164221 TGGAGAGTGGTTAGATTTCCATCC 59.836 45.833 0.00 0.00 36.09 3.51
2558 2594 5.119694 GTGGAGAGTGGTTAGATTTCCATC 58.880 45.833 0.00 0.00 35.85 3.51
2559 2595 4.383118 CGTGGAGAGTGGTTAGATTTCCAT 60.383 45.833 0.00 0.00 35.85 3.41
2560 2596 3.056107 CGTGGAGAGTGGTTAGATTTCCA 60.056 47.826 0.00 0.00 0.00 3.53
2561 2597 3.194968 TCGTGGAGAGTGGTTAGATTTCC 59.805 47.826 0.00 0.00 0.00 3.13
2562 2598 4.451629 TCGTGGAGAGTGGTTAGATTTC 57.548 45.455 0.00 0.00 0.00 2.17
2563 2599 4.223032 ACATCGTGGAGAGTGGTTAGATTT 59.777 41.667 0.00 0.00 0.00 2.17
2564 2600 3.769844 ACATCGTGGAGAGTGGTTAGATT 59.230 43.478 0.00 0.00 0.00 2.40
2565 2601 3.366396 ACATCGTGGAGAGTGGTTAGAT 58.634 45.455 0.00 0.00 0.00 1.98
2566 2602 2.753452 GACATCGTGGAGAGTGGTTAGA 59.247 50.000 0.00 0.00 0.00 2.10
2567 2603 2.159226 GGACATCGTGGAGAGTGGTTAG 60.159 54.545 0.00 0.00 0.00 2.34
2568 2604 1.822990 GGACATCGTGGAGAGTGGTTA 59.177 52.381 0.00 0.00 0.00 2.85
2569 2605 0.608640 GGACATCGTGGAGAGTGGTT 59.391 55.000 0.00 0.00 0.00 3.67
2570 2606 0.251832 AGGACATCGTGGAGAGTGGT 60.252 55.000 0.00 0.00 0.00 4.16
2571 2607 0.457851 GAGGACATCGTGGAGAGTGG 59.542 60.000 0.00 0.00 0.00 4.00
2572 2608 1.135257 GTGAGGACATCGTGGAGAGTG 60.135 57.143 0.00 0.00 0.00 3.51
2573 2609 1.178276 GTGAGGACATCGTGGAGAGT 58.822 55.000 0.00 0.00 0.00 3.24
2574 2610 0.099613 CGTGAGGACATCGTGGAGAG 59.900 60.000 0.00 0.00 0.00 3.20
2575 2611 0.608308 ACGTGAGGACATCGTGGAGA 60.608 55.000 0.00 0.00 34.53 3.71
2576 2612 0.456824 CACGTGAGGACATCGTGGAG 60.457 60.000 10.90 0.00 42.08 3.86
2577 2613 1.584495 CACGTGAGGACATCGTGGA 59.416 57.895 10.90 0.00 42.08 4.02
2578 2614 2.094659 GCACGTGAGGACATCGTGG 61.095 63.158 22.23 0.00 43.83 4.94
2579 2615 0.667487 AAGCACGTGAGGACATCGTG 60.667 55.000 22.23 11.62 45.00 4.35
2580 2616 0.388649 GAAGCACGTGAGGACATCGT 60.389 55.000 22.23 0.00 35.49 3.73
2581 2617 0.109086 AGAAGCACGTGAGGACATCG 60.109 55.000 22.23 0.00 0.00 3.84
2582 2618 1.203523 AGAGAAGCACGTGAGGACATC 59.796 52.381 22.23 8.66 0.00 3.06
2583 2619 1.261480 AGAGAAGCACGTGAGGACAT 58.739 50.000 22.23 0.00 0.00 3.06
2584 2620 1.040646 AAGAGAAGCACGTGAGGACA 58.959 50.000 22.23 0.00 0.00 4.02
2585 2621 1.000163 TCAAGAGAAGCACGTGAGGAC 60.000 52.381 22.23 7.04 0.00 3.85
2586 2622 1.328279 TCAAGAGAAGCACGTGAGGA 58.672 50.000 22.23 0.85 0.00 3.71
2587 2623 2.154854 TTCAAGAGAAGCACGTGAGG 57.845 50.000 22.23 0.00 0.00 3.86
2588 2624 2.866156 TGTTTCAAGAGAAGCACGTGAG 59.134 45.455 22.23 0.00 39.60 3.51
2589 2625 2.866156 CTGTTTCAAGAGAAGCACGTGA 59.134 45.455 22.23 0.00 39.60 4.35
2590 2626 2.032549 CCTGTTTCAAGAGAAGCACGTG 60.033 50.000 12.28 12.28 39.60 4.49
2591 2627 2.158957 TCCTGTTTCAAGAGAAGCACGT 60.159 45.455 0.00 0.00 39.60 4.49
2592 2628 2.483876 TCCTGTTTCAAGAGAAGCACG 58.516 47.619 0.00 0.00 39.60 5.34
2593 2629 5.444663 AAATCCTGTTTCAAGAGAAGCAC 57.555 39.130 0.00 0.00 39.60 4.40
2594 2630 5.360714 ACAAAATCCTGTTTCAAGAGAAGCA 59.639 36.000 0.00 0.00 41.78 3.91
2595 2631 5.836347 ACAAAATCCTGTTTCAAGAGAAGC 58.164 37.500 0.00 0.00 34.71 3.86
2596 2632 6.442112 GGACAAAATCCTGTTTCAAGAGAAG 58.558 40.000 0.00 0.00 45.22 2.85
2597 2633 6.391227 GGACAAAATCCTGTTTCAAGAGAA 57.609 37.500 0.00 0.00 45.22 2.87
2610 2646 7.860872 CTTTACATATAAAGCGGGACAAAATCC 59.139 37.037 0.00 0.00 42.46 3.01
2611 2647 8.782533 CTTTACATATAAAGCGGGACAAAATC 57.217 34.615 0.00 0.00 40.60 2.17
2630 2666 9.217278 TGTACTTTATTCGGTTATTGCTTTACA 57.783 29.630 0.00 0.00 0.00 2.41
2631 2667 9.481800 GTGTACTTTATTCGGTTATTGCTTTAC 57.518 33.333 0.00 0.00 0.00 2.01
2632 2668 8.382130 CGTGTACTTTATTCGGTTATTGCTTTA 58.618 33.333 0.00 0.00 0.00 1.85
2633 2669 7.238571 CGTGTACTTTATTCGGTTATTGCTTT 58.761 34.615 0.00 0.00 0.00 3.51
2634 2670 6.183360 CCGTGTACTTTATTCGGTTATTGCTT 60.183 38.462 0.00 0.00 36.99 3.91
2635 2671 5.292589 CCGTGTACTTTATTCGGTTATTGCT 59.707 40.000 0.00 0.00 36.99 3.91
2636 2672 5.495502 CCGTGTACTTTATTCGGTTATTGC 58.504 41.667 0.00 0.00 36.99 3.56
2637 2673 5.495502 GCCGTGTACTTTATTCGGTTATTG 58.504 41.667 0.00 0.00 42.62 1.90
2638 2674 4.571984 GGCCGTGTACTTTATTCGGTTATT 59.428 41.667 0.00 0.00 42.62 1.40
2639 2675 4.122046 GGCCGTGTACTTTATTCGGTTAT 58.878 43.478 0.00 0.00 42.62 1.89
2640 2676 3.520569 GGCCGTGTACTTTATTCGGTTA 58.479 45.455 0.00 0.00 42.62 2.85
2641 2677 2.349590 GGCCGTGTACTTTATTCGGTT 58.650 47.619 0.00 0.00 42.62 4.44
2642 2678 1.405933 GGGCCGTGTACTTTATTCGGT 60.406 52.381 0.00 0.00 42.62 4.69
2643 2679 1.292992 GGGCCGTGTACTTTATTCGG 58.707 55.000 0.00 0.00 43.37 4.30
2644 2680 2.012937 TGGGCCGTGTACTTTATTCG 57.987 50.000 0.00 0.00 0.00 3.34
2645 2681 2.542595 CGATGGGCCGTGTACTTTATTC 59.457 50.000 1.02 0.00 0.00 1.75
2646 2682 2.168936 TCGATGGGCCGTGTACTTTATT 59.831 45.455 1.02 0.00 0.00 1.40
2647 2683 1.758280 TCGATGGGCCGTGTACTTTAT 59.242 47.619 1.02 0.00 0.00 1.40
2648 2684 1.184431 TCGATGGGCCGTGTACTTTA 58.816 50.000 1.02 0.00 0.00 1.85
2649 2685 0.539986 ATCGATGGGCCGTGTACTTT 59.460 50.000 1.02 0.00 0.00 2.66
2650 2686 1.068127 GTATCGATGGGCCGTGTACTT 59.932 52.381 8.54 0.00 0.00 2.24
2651 2687 0.672342 GTATCGATGGGCCGTGTACT 59.328 55.000 8.54 0.00 0.00 2.73
2652 2688 0.386476 TGTATCGATGGGCCGTGTAC 59.614 55.000 8.54 4.32 0.00 2.90
2653 2689 1.112950 TTGTATCGATGGGCCGTGTA 58.887 50.000 8.54 0.00 0.00 2.90
2654 2690 0.250793 TTTGTATCGATGGGCCGTGT 59.749 50.000 8.54 0.00 0.00 4.49
2655 2691 1.374560 TTTTGTATCGATGGGCCGTG 58.625 50.000 8.54 0.00 0.00 4.94
2656 2692 1.946768 CATTTTGTATCGATGGGCCGT 59.053 47.619 8.54 0.00 0.00 5.68
2657 2693 2.217750 TCATTTTGTATCGATGGGCCG 58.782 47.619 8.54 0.00 0.00 6.13
2658 2694 4.164822 CATCATTTTGTATCGATGGGCC 57.835 45.455 8.54 0.00 33.22 5.80
2662 2698 5.106555 GCTACCCCATCATTTTGTATCGATG 60.107 44.000 8.54 0.00 35.97 3.84
2663 2699 5.003804 GCTACCCCATCATTTTGTATCGAT 58.996 41.667 2.16 2.16 0.00 3.59
2664 2700 4.385825 GCTACCCCATCATTTTGTATCGA 58.614 43.478 0.00 0.00 0.00 3.59
2665 2701 3.502211 GGCTACCCCATCATTTTGTATCG 59.498 47.826 0.00 0.00 0.00 2.92
2680 2716 0.108774 GCATTGTAGGAGGGCTACCC 59.891 60.000 0.00 0.00 45.90 3.69
2681 2717 0.108774 GGCATTGTAGGAGGGCTACC 59.891 60.000 0.00 0.00 0.00 3.18
2682 2718 0.249911 CGGCATTGTAGGAGGGCTAC 60.250 60.000 0.00 0.00 0.00 3.58
2683 2719 0.397957 TCGGCATTGTAGGAGGGCTA 60.398 55.000 0.00 0.00 0.00 3.93
2684 2720 1.056700 ATCGGCATTGTAGGAGGGCT 61.057 55.000 0.00 0.00 0.00 5.19
2685 2721 0.179018 AATCGGCATTGTAGGAGGGC 60.179 55.000 0.00 0.00 0.00 5.19
2686 2722 1.543429 GGAATCGGCATTGTAGGAGGG 60.543 57.143 0.00 0.00 0.00 4.30
2687 2723 1.140852 TGGAATCGGCATTGTAGGAGG 59.859 52.381 0.00 0.00 0.00 4.30
2688 2724 2.158900 ACTGGAATCGGCATTGTAGGAG 60.159 50.000 0.00 0.00 0.00 3.69
2689 2725 1.837439 ACTGGAATCGGCATTGTAGGA 59.163 47.619 0.00 0.00 0.00 2.94
2690 2726 2.332063 ACTGGAATCGGCATTGTAGG 57.668 50.000 0.00 0.00 0.00 3.18
2691 2727 5.989168 TGTTATACTGGAATCGGCATTGTAG 59.011 40.000 0.00 0.00 0.00 2.74
2692 2728 5.919755 TGTTATACTGGAATCGGCATTGTA 58.080 37.500 0.00 0.00 0.00 2.41
2693 2729 4.776349 TGTTATACTGGAATCGGCATTGT 58.224 39.130 0.00 0.00 0.00 2.71
2694 2730 5.056480 TCTGTTATACTGGAATCGGCATTG 58.944 41.667 0.00 0.00 0.00 2.82
2695 2731 5.290493 TCTGTTATACTGGAATCGGCATT 57.710 39.130 0.00 0.00 0.00 3.56
2696 2732 4.955811 TCTGTTATACTGGAATCGGCAT 57.044 40.909 0.00 0.00 0.00 4.40
2697 2733 4.955811 ATCTGTTATACTGGAATCGGCA 57.044 40.909 0.00 0.00 0.00 5.69
2698 2734 5.177696 GTGAATCTGTTATACTGGAATCGGC 59.822 44.000 0.00 0.00 0.00 5.54
2699 2735 5.402568 CGTGAATCTGTTATACTGGAATCGG 59.597 44.000 0.00 0.00 0.00 4.18
2700 2736 5.107837 GCGTGAATCTGTTATACTGGAATCG 60.108 44.000 0.00 0.00 0.00 3.34
2701 2737 5.753438 TGCGTGAATCTGTTATACTGGAATC 59.247 40.000 0.00 0.00 0.00 2.52
2702 2738 5.670485 TGCGTGAATCTGTTATACTGGAAT 58.330 37.500 0.00 0.00 0.00 3.01
2703 2739 5.079689 TGCGTGAATCTGTTATACTGGAA 57.920 39.130 0.00 0.00 0.00 3.53
2704 2740 4.401202 TCTGCGTGAATCTGTTATACTGGA 59.599 41.667 0.00 0.00 0.00 3.86
2705 2741 4.682787 TCTGCGTGAATCTGTTATACTGG 58.317 43.478 0.00 0.00 0.00 4.00
2706 2742 6.643845 CATTCTGCGTGAATCTGTTATACTG 58.356 40.000 2.31 0.00 43.00 2.74
2707 2743 5.235186 GCATTCTGCGTGAATCTGTTATACT 59.765 40.000 2.31 0.00 43.00 2.12
2708 2744 5.435557 GCATTCTGCGTGAATCTGTTATAC 58.564 41.667 2.31 0.00 43.00 1.47
2709 2745 5.657470 GCATTCTGCGTGAATCTGTTATA 57.343 39.130 2.31 0.00 43.00 0.98
2710 2746 4.542662 GCATTCTGCGTGAATCTGTTAT 57.457 40.909 2.31 0.00 43.00 1.89
2712 2748 2.907910 GCATTCTGCGTGAATCTGTT 57.092 45.000 2.31 0.00 43.00 3.16
2723 2759 0.042708 CGTAGTCGCATGCATTCTGC 60.043 55.000 19.57 13.85 45.29 4.26
2724 2760 1.559831 TCGTAGTCGCATGCATTCTG 58.440 50.000 19.57 0.14 36.96 3.02
2725 2761 2.515926 ATCGTAGTCGCATGCATTCT 57.484 45.000 19.57 14.10 36.96 2.40
2726 2762 2.408704 GGTATCGTAGTCGCATGCATTC 59.591 50.000 19.57 7.07 36.96 2.67
2727 2763 2.404215 GGTATCGTAGTCGCATGCATT 58.596 47.619 19.57 4.61 36.96 3.56
2728 2764 1.666023 CGGTATCGTAGTCGCATGCAT 60.666 52.381 19.57 5.35 36.96 3.96
2729 2765 0.317519 CGGTATCGTAGTCGCATGCA 60.318 55.000 19.57 1.73 36.96 3.96
2730 2766 0.040692 TCGGTATCGTAGTCGCATGC 60.041 55.000 7.91 7.91 37.69 4.06
2731 2767 2.394545 TTCGGTATCGTAGTCGCATG 57.605 50.000 0.00 0.00 37.69 4.06
2732 2768 2.615447 TCTTTCGGTATCGTAGTCGCAT 59.385 45.455 0.00 0.00 37.69 4.73
2733 2769 2.009051 TCTTTCGGTATCGTAGTCGCA 58.991 47.619 0.00 0.00 37.69 5.10
2734 2770 2.286294 TCTCTTTCGGTATCGTAGTCGC 59.714 50.000 0.00 0.00 37.69 5.19
2735 2771 4.526970 TTCTCTTTCGGTATCGTAGTCG 57.473 45.455 0.00 0.00 37.69 4.18
2736 2772 6.116680 TCTTTCTCTTTCGGTATCGTAGTC 57.883 41.667 0.00 0.00 37.69 2.59
2737 2773 6.150809 AGTTCTTTCTCTTTCGGTATCGTAGT 59.849 38.462 0.00 0.00 37.69 2.73
2738 2774 6.469595 CAGTTCTTTCTCTTTCGGTATCGTAG 59.530 42.308 0.00 0.00 37.69 3.51
2739 2775 6.149973 TCAGTTCTTTCTCTTTCGGTATCGTA 59.850 38.462 0.00 0.00 37.69 3.43
2740 2776 5.048224 TCAGTTCTTTCTCTTTCGGTATCGT 60.048 40.000 0.00 0.00 37.69 3.73
2741 2777 5.399858 TCAGTTCTTTCTCTTTCGGTATCG 58.600 41.667 0.00 0.00 37.82 2.92
2742 2778 6.391537 ACTCAGTTCTTTCTCTTTCGGTATC 58.608 40.000 0.00 0.00 0.00 2.24
2743 2779 6.347859 ACTCAGTTCTTTCTCTTTCGGTAT 57.652 37.500 0.00 0.00 0.00 2.73
2744 2780 5.786264 ACTCAGTTCTTTCTCTTTCGGTA 57.214 39.130 0.00 0.00 0.00 4.02
2745 2781 4.674281 ACTCAGTTCTTTCTCTTTCGGT 57.326 40.909 0.00 0.00 0.00 4.69
2746 2782 5.529791 TGTACTCAGTTCTTTCTCTTTCGG 58.470 41.667 0.00 0.00 0.00 4.30
2747 2783 7.169982 ACATTGTACTCAGTTCTTTCTCTTTCG 59.830 37.037 0.00 0.00 0.00 3.46
2748 2784 8.371770 ACATTGTACTCAGTTCTTTCTCTTTC 57.628 34.615 0.00 0.00 0.00 2.62
2749 2785 7.987458 TGACATTGTACTCAGTTCTTTCTCTTT 59.013 33.333 0.00 0.00 0.00 2.52
2750 2786 7.439655 GTGACATTGTACTCAGTTCTTTCTCTT 59.560 37.037 0.00 0.00 0.00 2.85
2751 2787 6.926272 GTGACATTGTACTCAGTTCTTTCTCT 59.074 38.462 0.00 0.00 0.00 3.10
2752 2788 6.129062 CGTGACATTGTACTCAGTTCTTTCTC 60.129 42.308 0.00 0.00 0.00 2.87
2753 2789 5.692204 CGTGACATTGTACTCAGTTCTTTCT 59.308 40.000 0.00 0.00 0.00 2.52
2754 2790 5.612709 GCGTGACATTGTACTCAGTTCTTTC 60.613 44.000 0.00 0.00 0.00 2.62
2755 2791 4.211374 GCGTGACATTGTACTCAGTTCTTT 59.789 41.667 0.00 0.00 0.00 2.52
2756 2792 3.741344 GCGTGACATTGTACTCAGTTCTT 59.259 43.478 0.00 0.00 0.00 2.52
2757 2793 3.005897 AGCGTGACATTGTACTCAGTTCT 59.994 43.478 0.00 0.00 0.00 3.01
2758 2794 3.318017 AGCGTGACATTGTACTCAGTTC 58.682 45.455 0.00 0.00 0.00 3.01
2759 2795 3.386768 AGCGTGACATTGTACTCAGTT 57.613 42.857 0.00 0.00 0.00 3.16
2760 2796 3.669824 CGTAGCGTGACATTGTACTCAGT 60.670 47.826 0.00 0.00 0.00 3.41
2761 2797 2.846550 CGTAGCGTGACATTGTACTCAG 59.153 50.000 0.00 0.00 0.00 3.35
2762 2798 2.858839 CGTAGCGTGACATTGTACTCA 58.141 47.619 0.00 0.00 0.00 3.41
2778 2814 3.568853 AGCTTAGGTGGTATAGTGCGTAG 59.431 47.826 0.00 0.00 0.00 3.51
2779 2815 3.559069 AGCTTAGGTGGTATAGTGCGTA 58.441 45.455 0.00 0.00 0.00 4.42
2780 2816 2.385803 AGCTTAGGTGGTATAGTGCGT 58.614 47.619 0.00 0.00 0.00 5.24
2781 2817 3.454371 AAGCTTAGGTGGTATAGTGCG 57.546 47.619 0.00 0.00 0.00 5.34
2782 2818 3.312697 GCAAAGCTTAGGTGGTATAGTGC 59.687 47.826 0.00 0.00 0.00 4.40
2783 2819 3.555956 CGCAAAGCTTAGGTGGTATAGTG 59.444 47.826 0.00 0.00 0.00 2.74
2784 2820 3.449737 TCGCAAAGCTTAGGTGGTATAGT 59.550 43.478 0.00 0.00 0.00 2.12
2785 2821 3.802685 GTCGCAAAGCTTAGGTGGTATAG 59.197 47.826 0.00 0.00 0.00 1.31
2786 2822 3.196039 TGTCGCAAAGCTTAGGTGGTATA 59.804 43.478 0.00 0.00 0.00 1.47
2787 2823 2.027561 TGTCGCAAAGCTTAGGTGGTAT 60.028 45.455 0.00 0.00 0.00 2.73
2788 2824 1.345089 TGTCGCAAAGCTTAGGTGGTA 59.655 47.619 0.00 0.00 0.00 3.25
2789 2825 0.107831 TGTCGCAAAGCTTAGGTGGT 59.892 50.000 0.00 0.00 0.00 4.16
2790 2826 1.069227 GTTGTCGCAAAGCTTAGGTGG 60.069 52.381 0.00 0.00 0.00 4.61
2791 2827 1.398451 CGTTGTCGCAAAGCTTAGGTG 60.398 52.381 0.00 1.99 0.00 4.00
2792 2828 0.865769 CGTTGTCGCAAAGCTTAGGT 59.134 50.000 0.00 0.00 0.00 3.08
2793 2829 3.657537 CGTTGTCGCAAAGCTTAGG 57.342 52.632 0.00 0.00 0.00 2.69
2804 2840 0.435008 CTCTTTCGAAGGCGTTGTCG 59.565 55.000 1.73 0.00 38.98 4.35
2805 2841 1.779569 TCTCTTTCGAAGGCGTTGTC 58.220 50.000 1.73 0.00 38.98 3.18
2806 2842 2.234300 TTCTCTTTCGAAGGCGTTGT 57.766 45.000 1.73 0.00 38.98 3.32
2807 2843 3.242608 TGTTTTCTCTTTCGAAGGCGTTG 60.243 43.478 1.73 0.00 38.98 4.10
2808 2844 2.940410 TGTTTTCTCTTTCGAAGGCGTT 59.060 40.909 1.73 0.00 38.98 4.84
2809 2845 2.557317 TGTTTTCTCTTTCGAAGGCGT 58.443 42.857 1.73 0.00 38.98 5.68
2810 2846 3.289076 GTTGTTTTCTCTTTCGAAGGCG 58.711 45.455 1.73 0.00 39.35 5.52
2811 2847 3.289076 CGTTGTTTTCTCTTTCGAAGGC 58.711 45.455 1.73 0.00 0.00 4.35
2812 2848 3.242608 TGCGTTGTTTTCTCTTTCGAAGG 60.243 43.478 0.00 0.00 0.00 3.46
2813 2849 3.935450 TGCGTTGTTTTCTCTTTCGAAG 58.065 40.909 0.00 0.00 0.00 3.79
2814 2850 4.343811 TTGCGTTGTTTTCTCTTTCGAA 57.656 36.364 0.00 0.00 0.00 3.71
2815 2851 4.339429 CTTTGCGTTGTTTTCTCTTTCGA 58.661 39.130 0.00 0.00 0.00 3.71
2816 2852 3.061863 GCTTTGCGTTGTTTTCTCTTTCG 60.062 43.478 0.00 0.00 0.00 3.46
2817 2853 4.422997 GCTTTGCGTTGTTTTCTCTTTC 57.577 40.909 0.00 0.00 0.00 2.62
2832 2868 1.797537 GGCAACGATGACGCTTTGC 60.798 57.895 0.00 0.00 44.71 3.68
2833 2869 4.440214 GGCAACGATGACGCTTTG 57.560 55.556 0.00 0.00 43.96 2.77
2845 2881 1.527311 GTCTGTTCTTGACTCGGCAAC 59.473 52.381 0.00 0.00 0.00 4.17
2846 2882 1.138069 TGTCTGTTCTTGACTCGGCAA 59.862 47.619 0.00 0.00 35.63 4.52
2847 2883 0.750249 TGTCTGTTCTTGACTCGGCA 59.250 50.000 0.00 0.00 35.63 5.69
2848 2884 1.795286 CTTGTCTGTTCTTGACTCGGC 59.205 52.381 0.00 0.00 35.63 5.54
2849 2885 2.408050 CCTTGTCTGTTCTTGACTCGG 58.592 52.381 0.00 0.00 35.63 4.63
2850 2886 2.408050 CCCTTGTCTGTTCTTGACTCG 58.592 52.381 0.00 0.00 35.63 4.18
2851 2887 2.772287 CCCCTTGTCTGTTCTTGACTC 58.228 52.381 0.00 0.00 35.63 3.36
2852 2888 1.202818 GCCCCTTGTCTGTTCTTGACT 60.203 52.381 0.00 0.00 35.63 3.41
2853 2889 1.202818 AGCCCCTTGTCTGTTCTTGAC 60.203 52.381 0.00 0.00 35.21 3.18
2854 2890 1.140312 AGCCCCTTGTCTGTTCTTGA 58.860 50.000 0.00 0.00 0.00 3.02
2855 2891 1.986882 AAGCCCCTTGTCTGTTCTTG 58.013 50.000 0.00 0.00 0.00 3.02
2856 2892 3.487372 GTTAAGCCCCTTGTCTGTTCTT 58.513 45.455 0.00 0.00 0.00 2.52
2857 2893 2.224793 GGTTAAGCCCCTTGTCTGTTCT 60.225 50.000 0.00 0.00 0.00 3.01
2858 2894 2.160205 GGTTAAGCCCCTTGTCTGTTC 58.840 52.381 0.00 0.00 0.00 3.18
2859 2895 2.287977 GGTTAAGCCCCTTGTCTGTT 57.712 50.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.