Multiple sequence alignment - TraesCS6D01G085300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G085300 chr6D 100.000 6565 0 0 1 6565 50751110 50744546 0.000000e+00 12124.0
1 TraesCS6D01G085300 chr6B 94.125 4970 181 47 1566 6488 120663328 120668233 0.000000e+00 7457.0
2 TraesCS6D01G085300 chr6B 89.167 1200 81 35 385 1568 120662134 120663300 0.000000e+00 1450.0
3 TraesCS6D01G085300 chr6B 80.556 180 23 11 130 306 120661636 120661806 1.920000e-25 128.0
4 TraesCS6D01G085300 chr6B 92.045 88 5 1 6480 6565 120669687 120669774 8.940000e-24 122.0
5 TraesCS6D01G085300 chr6A 95.252 3307 117 18 1923 5204 64312759 64316050 0.000000e+00 5201.0
6 TraesCS6D01G085300 chr6A 89.044 1579 91 40 371 1920 64311191 64312716 0.000000e+00 1882.0
7 TraesCS6D01G085300 chr6A 83.427 1249 99 61 5316 6497 64316111 64317318 0.000000e+00 1061.0
8 TraesCS6D01G085300 chr1B 88.298 376 34 6 5576 5942 217555901 217555527 6.040000e-120 442.0
9 TraesCS6D01G085300 chr1B 84.688 320 25 13 5938 6248 217555489 217555185 1.380000e-76 298.0
10 TraesCS6D01G085300 chr2B 87.200 375 39 5 5576 5942 181700817 181700444 1.020000e-112 418.0
11 TraesCS6D01G085300 chr2B 78.889 630 73 38 5938 6565 181700410 181699839 8.040000e-99 372.0
12 TraesCS6D01G085300 chr2B 91.837 49 4 0 343 391 143131487 143131535 1.180000e-07 69.4
13 TraesCS6D01G085300 chr2B 93.333 45 3 0 343 387 765483925 765483881 4.250000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G085300 chr6D 50744546 50751110 6564 True 12124.000000 12124 100.00000 1 6565 1 chr6D.!!$R1 6564
1 TraesCS6D01G085300 chr6B 120661636 120669774 8138 False 2289.250000 7457 88.97325 130 6565 4 chr6B.!!$F1 6435
2 TraesCS6D01G085300 chr6A 64311191 64317318 6127 False 2714.666667 5201 89.24100 371 6497 3 chr6A.!!$F1 6126
3 TraesCS6D01G085300 chr1B 217555185 217555901 716 True 370.000000 442 86.49300 5576 6248 2 chr1B.!!$R1 672
4 TraesCS6D01G085300 chr2B 181699839 181700817 978 True 395.000000 418 83.04450 5576 6565 2 chr2B.!!$R2 989

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
317 327 0.040058 TGAAAGTCTGCCATGCCCAT 59.960 50.0 0.0 0.0 0.00 4.00 F
1171 1475 0.175073 GAAGGCTAACCGTGATCCGT 59.825 55.0 0.0 0.0 42.76 4.69 F
1294 1598 0.808453 CCGCCGTATCGTGTTTGGAT 60.808 55.0 0.0 0.0 0.00 3.41 F
1865 2202 1.198713 ACCTCTGGTGGTGATGCTAG 58.801 55.0 0.0 0.0 39.17 3.42 F
3449 3845 0.534203 ATTCGCACGGACCACACTTT 60.534 50.0 0.0 0.0 0.00 2.66 F
4713 5119 0.034477 CTGTCCCGCCCAAAGGTATT 60.034 55.0 0.0 0.0 34.57 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1238 1542 1.207329 CTAAGTCGGAACCCAGGGAAG 59.793 57.143 14.54 0.0 0.00 3.46 R
2127 2517 2.093128 AGGTAAATAAGCCACCGGTCAG 60.093 50.000 2.59 0.0 37.42 3.51 R
2516 2906 3.060339 GCAAACAAAGAAGAAACATGCCG 60.060 43.478 0.00 0.0 0.00 5.69 R
3557 3953 2.743938 AGAACAGTACACTGAACGCTG 58.256 47.619 16.05 0.0 46.59 5.18 R
5397 5807 1.275573 ACGTAAGCAAGGAGTTCCTCC 59.724 52.381 0.22 1.9 47.00 4.30 R
6132 6654 0.533032 GGTCCTAGCTATGCCGATCC 59.467 60.000 0.00 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.713708 TTTTTCCCCAGTTTCTTCATAATACA 57.286 30.769 0.00 0.00 0.00 2.29
26 27 8.893563 TTTTCCCCAGTTTCTTCATAATACAT 57.106 30.769 0.00 0.00 0.00 2.29
27 28 8.519799 TTTCCCCAGTTTCTTCATAATACATC 57.480 34.615 0.00 0.00 0.00 3.06
28 29 7.206789 TCCCCAGTTTCTTCATAATACATCA 57.793 36.000 0.00 0.00 0.00 3.07
29 30 7.638444 TCCCCAGTTTCTTCATAATACATCAA 58.362 34.615 0.00 0.00 0.00 2.57
30 31 8.281531 TCCCCAGTTTCTTCATAATACATCAAT 58.718 33.333 0.00 0.00 0.00 2.57
31 32 9.573166 CCCCAGTTTCTTCATAATACATCAATA 57.427 33.333 0.00 0.00 0.00 1.90
38 39 8.520835 TCTTCATAATACATCAATACACTCGC 57.479 34.615 0.00 0.00 0.00 5.03
39 40 7.598869 TCTTCATAATACATCAATACACTCGCC 59.401 37.037 0.00 0.00 0.00 5.54
40 41 6.754193 TCATAATACATCAATACACTCGCCA 58.246 36.000 0.00 0.00 0.00 5.69
41 42 7.213678 TCATAATACATCAATACACTCGCCAA 58.786 34.615 0.00 0.00 0.00 4.52
42 43 5.991328 AATACATCAATACACTCGCCAAG 57.009 39.130 0.00 0.00 0.00 3.61
43 44 2.009774 ACATCAATACACTCGCCAAGC 58.990 47.619 0.00 0.00 0.00 4.01
60 61 2.341846 AGCGAGACTTGAAAAACCCA 57.658 45.000 0.00 0.00 0.00 4.51
61 62 2.650322 AGCGAGACTTGAAAAACCCAA 58.350 42.857 0.00 0.00 0.00 4.12
62 63 2.357952 AGCGAGACTTGAAAAACCCAAC 59.642 45.455 0.00 0.00 0.00 3.77
63 64 2.543031 GCGAGACTTGAAAAACCCAACC 60.543 50.000 0.00 0.00 0.00 3.77
64 65 2.685897 CGAGACTTGAAAAACCCAACCA 59.314 45.455 0.00 0.00 0.00 3.67
65 66 3.243068 CGAGACTTGAAAAACCCAACCAG 60.243 47.826 0.00 0.00 0.00 4.00
66 67 3.951680 GAGACTTGAAAAACCCAACCAGA 59.048 43.478 0.00 0.00 0.00 3.86
67 68 4.546674 AGACTTGAAAAACCCAACCAGAT 58.453 39.130 0.00 0.00 0.00 2.90
68 69 5.701224 AGACTTGAAAAACCCAACCAGATA 58.299 37.500 0.00 0.00 0.00 1.98
69 70 6.133356 AGACTTGAAAAACCCAACCAGATAA 58.867 36.000 0.00 0.00 0.00 1.75
70 71 6.265422 AGACTTGAAAAACCCAACCAGATAAG 59.735 38.462 0.00 0.00 0.00 1.73
71 72 4.864704 TGAAAAACCCAACCAGATAAGC 57.135 40.909 0.00 0.00 0.00 3.09
72 73 4.219115 TGAAAAACCCAACCAGATAAGCA 58.781 39.130 0.00 0.00 0.00 3.91
73 74 4.038642 TGAAAAACCCAACCAGATAAGCAC 59.961 41.667 0.00 0.00 0.00 4.40
74 75 2.215942 AACCCAACCAGATAAGCACC 57.784 50.000 0.00 0.00 0.00 5.01
75 76 1.372501 ACCCAACCAGATAAGCACCT 58.627 50.000 0.00 0.00 0.00 4.00
76 77 1.710809 ACCCAACCAGATAAGCACCTT 59.289 47.619 0.00 0.00 0.00 3.50
77 78 2.916934 ACCCAACCAGATAAGCACCTTA 59.083 45.455 0.00 0.00 0.00 2.69
78 79 3.527665 ACCCAACCAGATAAGCACCTTAT 59.472 43.478 0.00 0.00 39.09 1.73
79 80 4.017499 ACCCAACCAGATAAGCACCTTATT 60.017 41.667 0.00 0.00 36.87 1.40
80 81 4.956075 CCCAACCAGATAAGCACCTTATTT 59.044 41.667 0.00 0.00 36.87 1.40
81 82 5.067805 CCCAACCAGATAAGCACCTTATTTC 59.932 44.000 0.00 0.00 36.87 2.17
82 83 5.652014 CCAACCAGATAAGCACCTTATTTCA 59.348 40.000 0.00 0.00 36.87 2.69
83 84 6.322201 CCAACCAGATAAGCACCTTATTTCAT 59.678 38.462 0.00 0.00 36.87 2.57
84 85 7.420800 CAACCAGATAAGCACCTTATTTCATC 58.579 38.462 0.00 0.00 36.87 2.92
85 86 6.662755 ACCAGATAAGCACCTTATTTCATCA 58.337 36.000 0.00 0.00 36.87 3.07
86 87 6.543831 ACCAGATAAGCACCTTATTTCATCAC 59.456 38.462 0.00 0.00 36.87 3.06
87 88 6.016777 CCAGATAAGCACCTTATTTCATCACC 60.017 42.308 0.00 0.00 36.87 4.02
88 89 6.543465 CAGATAAGCACCTTATTTCATCACCA 59.457 38.462 0.00 0.00 36.87 4.17
89 90 6.769822 AGATAAGCACCTTATTTCATCACCAG 59.230 38.462 0.00 0.00 36.87 4.00
90 91 3.019564 AGCACCTTATTTCATCACCAGC 58.980 45.455 0.00 0.00 0.00 4.85
91 92 2.754552 GCACCTTATTTCATCACCAGCA 59.245 45.455 0.00 0.00 0.00 4.41
92 93 3.428045 GCACCTTATTTCATCACCAGCAC 60.428 47.826 0.00 0.00 0.00 4.40
93 94 4.012374 CACCTTATTTCATCACCAGCACT 58.988 43.478 0.00 0.00 0.00 4.40
94 95 4.095483 CACCTTATTTCATCACCAGCACTC 59.905 45.833 0.00 0.00 0.00 3.51
95 96 3.310774 CCTTATTTCATCACCAGCACTCG 59.689 47.826 0.00 0.00 0.00 4.18
96 97 2.479566 ATTTCATCACCAGCACTCGT 57.520 45.000 0.00 0.00 0.00 4.18
97 98 1.511850 TTTCATCACCAGCACTCGTG 58.488 50.000 0.00 0.00 0.00 4.35
107 108 4.684265 CACTCGTGCGCTATACGT 57.316 55.556 16.86 0.00 46.11 3.57
108 109 2.195615 CACTCGTGCGCTATACGTG 58.804 57.895 16.86 16.49 46.11 4.49
109 110 1.063649 ACTCGTGCGCTATACGTGG 59.936 57.895 20.09 15.17 46.11 4.94
110 111 1.063649 CTCGTGCGCTATACGTGGT 59.936 57.895 16.86 0.00 46.11 4.16
111 112 0.305617 CTCGTGCGCTATACGTGGTA 59.694 55.000 16.86 0.00 46.11 3.25
112 113 0.946528 TCGTGCGCTATACGTGGTAT 59.053 50.000 16.86 0.00 46.11 2.73
113 114 2.142319 TCGTGCGCTATACGTGGTATA 58.858 47.619 16.86 0.00 46.11 1.47
114 115 2.096268 TCGTGCGCTATACGTGGTATAC 60.096 50.000 16.86 0.00 46.11 1.47
115 116 2.349722 CGTGCGCTATACGTGGTATACA 60.350 50.000 9.73 0.00 46.11 2.29
116 117 3.668757 CGTGCGCTATACGTGGTATACAT 60.669 47.826 9.73 0.00 46.11 2.29
117 118 4.435917 CGTGCGCTATACGTGGTATACATA 60.436 45.833 9.73 0.00 46.11 2.29
118 119 4.790140 GTGCGCTATACGTGGTATACATAC 59.210 45.833 9.73 2.52 46.11 2.39
119 120 4.455190 TGCGCTATACGTGGTATACATACA 59.545 41.667 9.73 0.00 46.11 2.29
120 121 5.048852 TGCGCTATACGTGGTATACATACAA 60.049 40.000 9.73 0.00 46.11 2.41
121 122 5.284660 GCGCTATACGTGGTATACATACAAC 59.715 44.000 0.00 0.00 46.11 3.32
122 123 6.372981 CGCTATACGTGGTATACATACAACA 58.627 40.000 5.01 0.00 37.09 3.33
123 124 6.857451 CGCTATACGTGGTATACATACAACAA 59.143 38.462 5.01 0.00 37.09 2.83
124 125 7.539710 CGCTATACGTGGTATACATACAACAAT 59.460 37.037 5.01 3.48 37.09 2.71
125 126 9.844790 GCTATACGTGGTATACATACAACAATA 57.155 33.333 5.01 4.25 37.09 1.90
128 129 7.760131 ACGTGGTATACATACAACAATACAC 57.240 36.000 5.01 0.00 37.09 2.90
133 134 7.982919 TGGTATACATACAACAATACACTGACC 59.017 37.037 5.01 0.00 34.98 4.02
139 140 3.127589 CAACAATACACTGACCACGTCA 58.872 45.455 0.00 0.00 40.50 4.35
143 144 4.819630 ACAATACACTGACCACGTCATTTT 59.180 37.500 0.00 0.00 41.94 1.82
151 152 3.139077 GACCACGTCATTTTCAAGGAGT 58.861 45.455 0.00 0.00 32.09 3.85
154 155 4.062293 CCACGTCATTTTCAAGGAGTACA 58.938 43.478 0.00 0.00 0.00 2.90
163 164 3.917329 TCAAGGAGTACAAGTGACTCG 57.083 47.619 0.00 0.00 43.62 4.18
167 168 4.931661 AGGAGTACAAGTGACTCGAAAA 57.068 40.909 0.00 0.00 43.62 2.29
192 193 8.770438 ATTAACTTGAAAGTCAAAGTTGCAAA 57.230 26.923 0.00 0.00 38.57 3.68
194 195 5.783111 ACTTGAAAGTCAAAGTTGCAAAGT 58.217 33.333 0.00 0.00 35.73 2.66
225 234 8.018537 ACTAATTGTATACTACACTCATGCCA 57.981 34.615 4.17 0.00 38.63 4.92
242 251 1.933853 GCCATTGACTATGTCCGACAC 59.066 52.381 2.57 0.00 31.99 3.67
243 252 2.550978 CCATTGACTATGTCCGACACC 58.449 52.381 2.57 0.00 31.99 4.16
244 253 2.093711 CCATTGACTATGTCCGACACCA 60.094 50.000 2.57 0.00 31.99 4.17
245 254 3.432186 CCATTGACTATGTCCGACACCAT 60.432 47.826 2.57 0.00 31.99 3.55
246 255 2.959507 TGACTATGTCCGACACCATG 57.040 50.000 2.57 0.00 0.00 3.66
247 256 2.176045 TGACTATGTCCGACACCATGT 58.824 47.619 2.57 0.60 0.00 3.21
248 257 3.358118 TGACTATGTCCGACACCATGTA 58.642 45.455 2.57 0.00 0.00 2.29
249 258 3.958147 TGACTATGTCCGACACCATGTAT 59.042 43.478 2.57 0.00 0.00 2.29
250 259 5.134661 TGACTATGTCCGACACCATGTATA 58.865 41.667 2.57 0.00 0.00 1.47
251 260 5.240844 TGACTATGTCCGACACCATGTATAG 59.759 44.000 2.57 2.71 0.00 1.31
252 261 4.523173 ACTATGTCCGACACCATGTATAGG 59.477 45.833 2.57 0.00 0.00 2.57
253 262 3.021177 TGTCCGACACCATGTATAGGA 57.979 47.619 0.00 0.00 0.00 2.94
254 263 2.691526 TGTCCGACACCATGTATAGGAC 59.308 50.000 17.10 17.10 43.52 3.85
255 264 2.035576 GTCCGACACCATGTATAGGACC 59.964 54.545 14.73 0.00 40.47 4.46
256 265 2.036387 CCGACACCATGTATAGGACCA 58.964 52.381 0.00 0.00 0.00 4.02
269 278 9.046296 CATGTATAGGACCATAGTTTGACTTTC 57.954 37.037 0.00 0.00 0.00 2.62
273 282 5.617252 AGGACCATAGTTTGACTTTCGAAA 58.383 37.500 10.71 10.71 0.00 3.46
274 283 5.469084 AGGACCATAGTTTGACTTTCGAAAC 59.531 40.000 6.47 0.00 33.11 2.78
282 291 2.479837 TGACTTTCGAAACAGCACGAT 58.520 42.857 6.47 0.00 38.30 3.73
289 298 1.729472 CGAAACAGCACGATCGACTCT 60.729 52.381 24.34 12.08 37.48 3.24
293 303 1.202234 ACAGCACGATCGACTCTGATG 60.202 52.381 28.23 23.32 0.00 3.07
306 316 6.459066 TCGACTCTGATGAATTTGAAAGTCT 58.541 36.000 6.92 0.00 31.86 3.24
307 317 6.367149 TCGACTCTGATGAATTTGAAAGTCTG 59.633 38.462 6.92 0.00 31.86 3.51
308 318 6.251655 ACTCTGATGAATTTGAAAGTCTGC 57.748 37.500 6.92 0.00 0.00 4.26
309 319 5.182760 ACTCTGATGAATTTGAAAGTCTGCC 59.817 40.000 6.92 0.00 0.00 4.85
310 320 5.072055 TCTGATGAATTTGAAAGTCTGCCA 58.928 37.500 6.92 1.85 0.00 4.92
311 321 5.713389 TCTGATGAATTTGAAAGTCTGCCAT 59.287 36.000 6.92 0.00 0.00 4.40
314 324 3.256558 GAATTTGAAAGTCTGCCATGCC 58.743 45.455 0.00 0.00 0.00 4.40
315 325 0.968405 TTTGAAAGTCTGCCATGCCC 59.032 50.000 0.00 0.00 0.00 5.36
316 326 0.178967 TTGAAAGTCTGCCATGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
317 327 0.040058 TGAAAGTCTGCCATGCCCAT 59.960 50.000 0.00 0.00 0.00 4.00
318 328 0.458669 GAAAGTCTGCCATGCCCATG 59.541 55.000 1.28 1.28 38.51 3.66
319 329 0.251922 AAAGTCTGCCATGCCCATGT 60.252 50.000 7.42 0.00 37.11 3.21
320 330 0.682209 AAGTCTGCCATGCCCATGTC 60.682 55.000 7.42 0.00 37.11 3.06
321 331 1.077212 GTCTGCCATGCCCATGTCT 60.077 57.895 7.42 0.00 37.11 3.41
322 332 1.077285 TCTGCCATGCCCATGTCTG 60.077 57.895 7.42 0.00 37.11 3.51
323 333 2.756691 TGCCATGCCCATGTCTGC 60.757 61.111 7.42 4.68 37.11 4.26
325 335 2.043752 CCATGCCCATGTCTGCCA 60.044 61.111 7.42 0.00 37.11 4.92
326 336 1.456892 CCATGCCCATGTCTGCCAT 60.457 57.895 7.42 0.00 37.11 4.40
332 342 4.270482 CATGTCTGCCATGCCCAT 57.730 55.556 0.00 0.00 44.21 4.00
335 345 1.040893 ATGTCTGCCATGCCCATGTG 61.041 55.000 7.42 1.07 37.11 3.21
337 347 3.845259 CTGCCATGCCCATGTGCC 61.845 66.667 14.67 3.08 37.11 5.01
341 351 1.401318 GCCATGCCCATGTGCCATTA 61.401 55.000 0.00 0.00 37.11 1.90
342 352 1.121378 CCATGCCCATGTGCCATTAA 58.879 50.000 0.00 0.00 37.11 1.40
344 354 2.898612 CCATGCCCATGTGCCATTAATA 59.101 45.455 0.00 0.00 37.11 0.98
345 355 3.306225 CCATGCCCATGTGCCATTAATAC 60.306 47.826 0.00 0.00 37.11 1.89
347 357 3.574749 TGCCCATGTGCCATTAATACAT 58.425 40.909 0.00 0.00 35.56 2.29
349 359 3.056607 GCCCATGTGCCATTAATACATCC 60.057 47.826 0.26 0.00 33.06 3.51
350 360 4.151121 CCCATGTGCCATTAATACATCCA 58.849 43.478 0.26 0.00 33.06 3.41
351 361 4.773674 CCCATGTGCCATTAATACATCCAT 59.226 41.667 0.26 0.00 33.06 3.41
352 362 5.246656 CCCATGTGCCATTAATACATCCATT 59.753 40.000 0.26 0.00 33.06 3.16
354 364 6.869913 CCATGTGCCATTAATACATCCATTTC 59.130 38.462 0.26 0.00 33.06 2.17
360 370 7.040478 TGCCATTAATACATCCATTTCTGCTAC 60.040 37.037 0.00 0.00 0.00 3.58
361 371 7.040478 GCCATTAATACATCCATTTCTGCTACA 60.040 37.037 0.00 0.00 0.00 2.74
363 373 9.888878 CATTAATACATCCATTTCTGCTACAAG 57.111 33.333 0.00 0.00 0.00 3.16
368 378 7.944729 ACATCCATTTCTGCTACAAGTAATT 57.055 32.000 0.00 0.00 0.00 1.40
370 380 8.462016 ACATCCATTTCTGCTACAAGTAATTTC 58.538 33.333 0.00 0.00 0.00 2.17
371 381 7.072177 TCCATTTCTGCTACAAGTAATTTCG 57.928 36.000 0.00 0.00 0.00 3.46
373 383 7.389330 TCCATTTCTGCTACAAGTAATTTCGAA 59.611 33.333 0.00 0.00 0.00 3.71
374 384 7.481798 CCATTTCTGCTACAAGTAATTTCGAAC 59.518 37.037 0.00 0.00 0.00 3.95
375 385 7.485418 TTTCTGCTACAAGTAATTTCGAACA 57.515 32.000 0.00 0.00 0.00 3.18
376 386 6.706055 TCTGCTACAAGTAATTTCGAACAG 57.294 37.500 0.00 0.00 0.00 3.16
377 387 6.452242 TCTGCTACAAGTAATTTCGAACAGA 58.548 36.000 0.00 0.00 0.00 3.41
378 388 6.586463 TCTGCTACAAGTAATTTCGAACAGAG 59.414 38.462 0.00 0.00 0.00 3.35
379 389 5.637810 TGCTACAAGTAATTTCGAACAGAGG 59.362 40.000 0.00 0.00 0.00 3.69
380 390 5.063564 GCTACAAGTAATTTCGAACAGAGGG 59.936 44.000 0.00 0.00 0.00 4.30
381 391 5.223449 ACAAGTAATTTCGAACAGAGGGA 57.777 39.130 0.00 0.00 0.00 4.20
382 392 5.238583 ACAAGTAATTTCGAACAGAGGGAG 58.761 41.667 0.00 0.00 0.00 4.30
383 393 5.221661 ACAAGTAATTTCGAACAGAGGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
431 690 2.951676 GTGCAACGGAGAGAAAAGAC 57.048 50.000 0.00 0.00 0.00 3.01
484 745 1.150764 CTAAAATCCGAGGGGCCCC 59.849 63.158 35.90 35.90 0.00 5.80
821 1106 1.371558 GGCGTTTCTCAGGTGAGGT 59.628 57.895 7.14 0.00 42.30 3.85
823 1108 0.951040 GCGTTTCTCAGGTGAGGTGG 60.951 60.000 7.14 0.00 42.30 4.61
824 1109 0.951040 CGTTTCTCAGGTGAGGTGGC 60.951 60.000 7.14 0.00 42.30 5.01
825 1110 0.398318 GTTTCTCAGGTGAGGTGGCT 59.602 55.000 7.14 0.00 42.30 4.75
830 1120 2.856000 AGGTGAGGTGGCTTGGCT 60.856 61.111 0.00 0.00 0.00 4.75
831 1121 1.538876 AGGTGAGGTGGCTTGGCTA 60.539 57.895 0.00 0.00 0.00 3.93
835 1125 1.222113 GAGGTGGCTTGGCTAGGAC 59.778 63.158 0.00 0.00 0.00 3.85
855 1145 4.237207 GAGATCCCCCGCCGGAAC 62.237 72.222 5.05 0.00 34.93 3.62
899 1202 4.929707 CGGCCGGGCTGGTTATCC 62.930 72.222 27.04 5.40 41.21 2.59
902 1205 2.421739 CCGGGCTGGTTATCCTCG 59.578 66.667 3.48 0.00 34.23 4.63
903 1206 2.432300 CCGGGCTGGTTATCCTCGT 61.432 63.158 3.48 0.00 34.23 4.18
904 1207 1.067582 CGGGCTGGTTATCCTCGTC 59.932 63.158 0.00 0.00 34.23 4.20
905 1208 1.067582 GGGCTGGTTATCCTCGTCG 59.932 63.158 0.00 0.00 34.23 5.12
907 1210 1.067582 GCTGGTTATCCTCGTCGGG 59.932 63.158 0.00 0.00 34.23 5.14
908 1211 1.067582 CTGGTTATCCTCGTCGGGC 59.932 63.158 0.00 0.00 34.23 6.13
909 1212 2.027169 GGTTATCCTCGTCGGGCG 59.973 66.667 0.00 0.00 43.01 6.13
931 1234 2.074547 TTTCGCTAGGGTTTCTGACG 57.925 50.000 6.70 0.00 0.00 4.35
1100 1404 1.098129 GCCCTTGCTCCTCGATTTCC 61.098 60.000 0.00 0.00 33.53 3.13
1171 1475 0.175073 GAAGGCTAACCGTGATCCGT 59.825 55.000 0.00 0.00 42.76 4.69
1217 1521 3.447025 GATTGGACTAGCCGCGCCT 62.447 63.158 0.00 0.00 40.66 5.52
1294 1598 0.808453 CCGCCGTATCGTGTTTGGAT 60.808 55.000 0.00 0.00 0.00 3.41
1407 1711 1.748122 CTGCCTGCTGTGGTCATCC 60.748 63.158 0.00 0.00 0.00 3.51
1472 1777 1.270785 GGTTGGATTTTTGTGGGGCTG 60.271 52.381 0.00 0.00 0.00 4.85
1509 1814 4.082787 ACATCCTTGTGTAATTTTCGCCTG 60.083 41.667 0.00 0.00 33.85 4.85
1723 2060 2.029020 GCGCATGTATCTATCCTGTGGA 60.029 50.000 0.30 0.00 35.55 4.02
1734 2071 2.930826 TCCTGTGGAGTTGAACCTTC 57.069 50.000 0.00 0.00 0.00 3.46
1741 2078 2.231478 TGGAGTTGAACCTTCTCGCTAG 59.769 50.000 0.00 0.00 0.00 3.42
1745 2082 3.003480 GTTGAACCTTCTCGCTAGCATT 58.997 45.455 16.45 0.00 0.00 3.56
1762 2099 7.130917 GCTAGCATTGTCTCAAAATATCACAG 58.869 38.462 10.63 0.00 0.00 3.66
1808 2145 6.145535 GGCTAATGATTCCGTTCATTTGATC 58.854 40.000 14.08 0.00 42.29 2.92
1856 2193 2.938956 AGAAGTTGAACCTCTGGTGG 57.061 50.000 0.00 0.00 35.34 4.61
1858 2195 2.158755 AGAAGTTGAACCTCTGGTGGTG 60.159 50.000 0.00 0.00 40.73 4.17
1865 2202 1.198713 ACCTCTGGTGGTGATGCTAG 58.801 55.000 0.00 0.00 39.17 3.42
1971 2348 9.743057 CAAAACTTGTCATGACATTAACCTTTA 57.257 29.630 28.32 9.89 41.52 1.85
1992 2369 9.793245 CCTTTATCGTTTACTAATTCTAATGCG 57.207 33.333 0.00 0.00 0.00 4.73
1997 2374 6.919662 TCGTTTACTAATTCTAATGCGTAGGG 59.080 38.462 0.00 0.00 0.00 3.53
2127 2517 1.344114 TGCAATTTGGAGAACTTGGCC 59.656 47.619 0.00 0.00 0.00 5.36
2317 2707 6.315393 CGAGTAAGCTTAGGCATTCCTTAAAA 59.685 38.462 6.38 0.00 40.66 1.52
2419 2809 3.519510 AGGTAGAAGCATTTAGACAGGCA 59.480 43.478 0.00 0.00 0.00 4.75
2511 2901 3.637911 TTATCACGCCCCTGTTACATT 57.362 42.857 0.00 0.00 0.00 2.71
2516 2906 2.676342 CACGCCCCTGTTACATTAACTC 59.324 50.000 0.00 0.00 39.38 3.01
2518 2908 2.285977 GCCCCTGTTACATTAACTCGG 58.714 52.381 0.00 0.00 39.38 4.63
2774 3164 0.963962 AACAGCTGGAGCCACATTTG 59.036 50.000 19.93 0.00 43.38 2.32
3024 3414 2.350522 AGACACATCAATTCGAGCACC 58.649 47.619 0.00 0.00 0.00 5.01
3123 3513 5.567430 TGGTAACTAGCTAGTTCTGACTCA 58.433 41.667 36.17 24.53 44.77 3.41
3174 3565 2.216940 CAGCAAAACTGCACGTGAATTG 59.783 45.455 22.23 11.96 40.19 2.32
3448 3844 1.070786 ATTCGCACGGACCACACTT 59.929 52.632 0.00 0.00 0.00 3.16
3449 3845 0.534203 ATTCGCACGGACCACACTTT 60.534 50.000 0.00 0.00 0.00 2.66
3450 3846 1.433053 TTCGCACGGACCACACTTTG 61.433 55.000 0.00 0.00 0.00 2.77
3496 3892 8.630054 TGATTTACTAGGTGCTATTGTGTTTT 57.370 30.769 0.00 0.00 0.00 2.43
3840 4237 9.091784 CTTAATGTGCTCATTATACGCTGATAT 57.908 33.333 18.99 0.00 43.31 1.63
3992 4391 5.796424 TCTATGCTTGAGTGATCTATGCA 57.204 39.130 0.00 0.00 0.00 3.96
4114 4513 7.095695 AGCTCTAAGAAGTTACATCTCTCAC 57.904 40.000 0.00 0.00 0.00 3.51
4129 4528 0.618981 CTCACCCTAAGTTGACCCCC 59.381 60.000 0.00 0.00 0.00 5.40
4237 4636 7.040548 TCACTCAAATACAATTGTCAATCAGCA 60.041 33.333 15.85 0.00 0.00 4.41
4382 4785 3.087031 CTGCCTGTCTCCATCAAACAAT 58.913 45.455 0.00 0.00 0.00 2.71
4401 4807 9.273016 CAAACAATCTGTTAGGTAGAGAAAAGA 57.727 33.333 0.00 0.00 40.14 2.52
4468 4874 3.797559 ATCCTAATTTCCTGGCTAGCC 57.202 47.619 27.71 27.71 0.00 3.93
4517 4923 5.600669 AAGAATTTACAACCCCCTTCTCT 57.399 39.130 0.00 0.00 0.00 3.10
4535 4941 3.734231 TCTCTTTGTTTCTCTGTTACGCG 59.266 43.478 3.53 3.53 0.00 6.01
4684 5090 2.641815 ACATGGAAGAGAGAACTGCCTT 59.358 45.455 0.00 0.00 36.58 4.35
4713 5119 0.034477 CTGTCCCGCCCAAAGGTATT 60.034 55.000 0.00 0.00 34.57 1.89
4726 5132 6.345298 CCCAAAGGTATTTGTTTGTCACTTT 58.655 36.000 0.57 0.00 43.61 2.66
4737 5144 6.403866 TGTTTGTCACTTTATTGCAGGATT 57.596 33.333 0.00 0.00 0.00 3.01
4760 5167 8.868522 ATTTGAAGGATGTTTTCTGATACTGA 57.131 30.769 0.00 0.00 0.00 3.41
5206 5614 6.150474 CGTAACAAAGAAGGTAATTCCATGGT 59.850 38.462 12.58 0.00 38.84 3.55
5214 5622 3.763897 AGGTAATTCCATGGTTTGCACTC 59.236 43.478 12.58 0.00 39.02 3.51
5216 5624 1.176527 ATTCCATGGTTTGCACTCCG 58.823 50.000 12.58 0.00 0.00 4.63
5217 5625 0.109532 TTCCATGGTTTGCACTCCGA 59.890 50.000 12.58 0.00 0.00 4.55
5221 5629 2.415893 CCATGGTTTGCACTCCGATTTC 60.416 50.000 2.57 0.00 0.00 2.17
5222 5630 0.871722 TGGTTTGCACTCCGATTTCG 59.128 50.000 0.00 0.00 39.44 3.46
5254 5663 1.241990 ATGGCTTGCTGCTCACTGTG 61.242 55.000 0.17 0.17 42.39 3.66
5258 5667 0.585357 CTTGCTGCTCACTGTGTCAC 59.415 55.000 7.79 0.00 0.00 3.67
5262 5671 1.671261 GCTGCTCACTGTGTCACTAGG 60.671 57.143 7.79 0.00 0.00 3.02
5303 5712 5.536161 ACCACTTCAGAACTTGTTGCATATT 59.464 36.000 0.00 0.00 0.00 1.28
5307 5716 9.630098 CACTTCAGAACTTGTTGCATATTTTAT 57.370 29.630 0.00 0.00 0.00 1.40
5356 5766 4.359434 TGTCACTTACCCTGTGCATTTA 57.641 40.909 0.00 0.00 35.58 1.40
5397 5807 0.749649 ACGAGGCTCTTATCAGGCAG 59.250 55.000 13.50 0.00 41.49 4.85
5472 5885 3.619233 AACGCATAACGCAGTCTTTTT 57.381 38.095 0.00 0.00 45.00 1.94
5513 5933 6.592994 TCTTGATCTGTTTCTCATGTGTCATC 59.407 38.462 0.00 0.00 0.00 2.92
5568 5988 2.287069 CCGATGTCTTGCTACTAGGACG 60.287 54.545 0.00 0.00 0.00 4.79
5569 5989 2.287069 CGATGTCTTGCTACTAGGACGG 60.287 54.545 0.00 0.00 0.00 4.79
5606 6033 4.080582 CCCCCTTGGTTCAGTTTTCTTTTT 60.081 41.667 0.00 0.00 0.00 1.94
5685 6114 6.713762 TCCTGACAAATGTGAAAAAGACAT 57.286 33.333 0.00 0.00 0.00 3.06
5716 6147 7.177744 GGGTTTGTAAATGGACAGAAAATCCTA 59.822 37.037 0.00 0.00 37.13 2.94
5774 6206 2.408271 TTCAGCCTGCCTGTCTTATG 57.592 50.000 0.00 0.00 42.38 1.90
5799 6232 2.291411 ACAGGATTGCAGCAGAATTCCT 60.291 45.455 0.65 10.82 0.00 3.36
5801 6234 3.022406 AGGATTGCAGCAGAATTCCTTC 58.978 45.455 0.65 0.00 0.00 3.46
5865 6298 0.515127 TTACACGCGCTTTCACCATG 59.485 50.000 5.73 0.00 0.00 3.66
5876 6314 4.122776 GCTTTCACCATGACTGACGATAT 58.877 43.478 0.00 0.00 0.00 1.63
5922 6365 6.346598 CGTAGTTCCATAGGATGCAAATAACG 60.347 42.308 0.00 0.00 0.00 3.18
5945 6435 2.962421 GGGGAAACAAGACCATTGTTGA 59.038 45.455 6.74 0.00 41.30 3.18
5948 6438 5.105756 GGGGAAACAAGACCATTGTTGATAG 60.106 44.000 6.74 0.00 41.30 2.08
5958 6448 4.342951 ACCATTGTTGATAGGGCATCATTG 59.657 41.667 0.00 0.00 43.26 2.82
6038 6548 4.055360 TCAATCACGGTTCAGTTACACAG 58.945 43.478 0.00 0.00 0.00 3.66
6072 6583 2.156697 GCGCAAAACTGAGAGAGTCTTC 59.843 50.000 0.30 0.00 31.73 2.87
6132 6654 7.113404 CACAGAAAATATGTTTCAACAAGACGG 59.887 37.037 0.00 0.00 43.03 4.79
6248 6771 2.198827 TCTTGTGGCCTAATGTGGTG 57.801 50.000 3.32 0.00 0.00 4.17
6277 6807 2.515523 CAGCCTCGGCATTCCAGG 60.516 66.667 11.02 0.00 44.88 4.45
6283 6813 1.339631 CCTCGGCATTCCAGGTTGTAA 60.340 52.381 0.00 0.00 0.00 2.41
6304 6850 9.811995 TTGTAAGTGTGTATGTATGTATCCTTC 57.188 33.333 0.00 0.00 0.00 3.46
6351 6915 0.251519 CTTGCTTTGCTCCCCCTTCT 60.252 55.000 0.00 0.00 0.00 2.85
6486 8515 2.977405 GTGCTTACCACAAGCTTGAG 57.023 50.000 32.50 24.08 44.06 3.02
6531 8562 3.396560 CAGACATGCAAGTGAGTGAGAA 58.603 45.455 0.00 0.00 0.00 2.87
6534 8565 2.486982 ACATGCAAGTGAGTGAGAATGC 59.513 45.455 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.713708 TGTATTATGAAGAAACTGGGGAAAAA 57.286 30.769 0.00 0.00 0.00 1.94
1 2 8.893563 ATGTATTATGAAGAAACTGGGGAAAA 57.106 30.769 0.00 0.00 0.00 2.29
2 3 8.112822 TGATGTATTATGAAGAAACTGGGGAAA 58.887 33.333 0.00 0.00 0.00 3.13
3 4 7.638444 TGATGTATTATGAAGAAACTGGGGAA 58.362 34.615 0.00 0.00 0.00 3.97
4 5 7.206789 TGATGTATTATGAAGAAACTGGGGA 57.793 36.000 0.00 0.00 0.00 4.81
5 6 7.880160 TTGATGTATTATGAAGAAACTGGGG 57.120 36.000 0.00 0.00 0.00 4.96
12 13 8.978539 GCGAGTGTATTGATGTATTATGAAGAA 58.021 33.333 0.00 0.00 0.00 2.52
13 14 7.598869 GGCGAGTGTATTGATGTATTATGAAGA 59.401 37.037 0.00 0.00 0.00 2.87
14 15 7.384932 TGGCGAGTGTATTGATGTATTATGAAG 59.615 37.037 0.00 0.00 0.00 3.02
15 16 7.213678 TGGCGAGTGTATTGATGTATTATGAA 58.786 34.615 0.00 0.00 0.00 2.57
16 17 6.754193 TGGCGAGTGTATTGATGTATTATGA 58.246 36.000 0.00 0.00 0.00 2.15
17 18 7.420184 TTGGCGAGTGTATTGATGTATTATG 57.580 36.000 0.00 0.00 0.00 1.90
18 19 6.147821 GCTTGGCGAGTGTATTGATGTATTAT 59.852 38.462 3.19 0.00 0.00 1.28
19 20 5.465390 GCTTGGCGAGTGTATTGATGTATTA 59.535 40.000 3.19 0.00 0.00 0.98
20 21 4.273480 GCTTGGCGAGTGTATTGATGTATT 59.727 41.667 3.19 0.00 0.00 1.89
21 22 3.809832 GCTTGGCGAGTGTATTGATGTAT 59.190 43.478 3.19 0.00 0.00 2.29
22 23 3.194861 GCTTGGCGAGTGTATTGATGTA 58.805 45.455 3.19 0.00 0.00 2.29
23 24 2.009774 GCTTGGCGAGTGTATTGATGT 58.990 47.619 3.19 0.00 0.00 3.06
24 25 2.744787 GCTTGGCGAGTGTATTGATG 57.255 50.000 3.19 0.00 0.00 3.07
40 41 2.650322 TGGGTTTTTCAAGTCTCGCTT 58.350 42.857 0.00 0.00 38.08 4.68
41 42 2.341846 TGGGTTTTTCAAGTCTCGCT 57.658 45.000 0.00 0.00 0.00 4.93
42 43 2.543031 GGTTGGGTTTTTCAAGTCTCGC 60.543 50.000 0.00 0.00 0.00 5.03
43 44 2.685897 TGGTTGGGTTTTTCAAGTCTCG 59.314 45.455 0.00 0.00 0.00 4.04
44 45 3.951680 TCTGGTTGGGTTTTTCAAGTCTC 59.048 43.478 0.00 0.00 0.00 3.36
45 46 3.976015 TCTGGTTGGGTTTTTCAAGTCT 58.024 40.909 0.00 0.00 0.00 3.24
46 47 4.937201 ATCTGGTTGGGTTTTTCAAGTC 57.063 40.909 0.00 0.00 0.00 3.01
47 48 5.221441 GCTTATCTGGTTGGGTTTTTCAAGT 60.221 40.000 0.00 0.00 0.00 3.16
48 49 5.221422 TGCTTATCTGGTTGGGTTTTTCAAG 60.221 40.000 0.00 0.00 0.00 3.02
49 50 4.651503 TGCTTATCTGGTTGGGTTTTTCAA 59.348 37.500 0.00 0.00 0.00 2.69
50 51 4.038642 GTGCTTATCTGGTTGGGTTTTTCA 59.961 41.667 0.00 0.00 0.00 2.69
51 52 4.556233 GTGCTTATCTGGTTGGGTTTTTC 58.444 43.478 0.00 0.00 0.00 2.29
52 53 3.323691 GGTGCTTATCTGGTTGGGTTTTT 59.676 43.478 0.00 0.00 0.00 1.94
53 54 2.897326 GGTGCTTATCTGGTTGGGTTTT 59.103 45.455 0.00 0.00 0.00 2.43
54 55 2.110011 AGGTGCTTATCTGGTTGGGTTT 59.890 45.455 0.00 0.00 0.00 3.27
55 56 1.710809 AGGTGCTTATCTGGTTGGGTT 59.289 47.619 0.00 0.00 0.00 4.11
56 57 1.372501 AGGTGCTTATCTGGTTGGGT 58.627 50.000 0.00 0.00 0.00 4.51
57 58 2.514458 AAGGTGCTTATCTGGTTGGG 57.486 50.000 0.00 0.00 0.00 4.12
58 59 5.652014 TGAAATAAGGTGCTTATCTGGTTGG 59.348 40.000 0.00 0.00 35.85 3.77
59 60 6.757897 TGAAATAAGGTGCTTATCTGGTTG 57.242 37.500 0.00 0.00 35.85 3.77
60 61 7.067494 GTGATGAAATAAGGTGCTTATCTGGTT 59.933 37.037 0.00 0.00 35.85 3.67
61 62 6.543831 GTGATGAAATAAGGTGCTTATCTGGT 59.456 38.462 0.00 0.00 35.85 4.00
62 63 6.016777 GGTGATGAAATAAGGTGCTTATCTGG 60.017 42.308 0.00 0.00 35.85 3.86
63 64 6.543465 TGGTGATGAAATAAGGTGCTTATCTG 59.457 38.462 0.00 0.00 35.85 2.90
64 65 6.662755 TGGTGATGAAATAAGGTGCTTATCT 58.337 36.000 0.00 0.00 35.85 1.98
65 66 6.514048 GCTGGTGATGAAATAAGGTGCTTATC 60.514 42.308 0.00 0.00 35.85 1.75
66 67 5.300286 GCTGGTGATGAAATAAGGTGCTTAT 59.700 40.000 0.00 0.00 38.17 1.73
67 68 4.640201 GCTGGTGATGAAATAAGGTGCTTA 59.360 41.667 0.00 0.00 0.00 3.09
68 69 3.445096 GCTGGTGATGAAATAAGGTGCTT 59.555 43.478 0.00 0.00 0.00 3.91
69 70 3.019564 GCTGGTGATGAAATAAGGTGCT 58.980 45.455 0.00 0.00 0.00 4.40
70 71 2.754552 TGCTGGTGATGAAATAAGGTGC 59.245 45.455 0.00 0.00 0.00 5.01
71 72 4.012374 AGTGCTGGTGATGAAATAAGGTG 58.988 43.478 0.00 0.00 0.00 4.00
72 73 4.265073 GAGTGCTGGTGATGAAATAAGGT 58.735 43.478 0.00 0.00 0.00 3.50
73 74 3.310774 CGAGTGCTGGTGATGAAATAAGG 59.689 47.826 0.00 0.00 0.00 2.69
74 75 3.935203 ACGAGTGCTGGTGATGAAATAAG 59.065 43.478 0.00 0.00 0.00 1.73
75 76 3.684305 CACGAGTGCTGGTGATGAAATAA 59.316 43.478 8.36 0.00 41.03 1.40
76 77 3.261580 CACGAGTGCTGGTGATGAAATA 58.738 45.455 8.36 0.00 41.03 1.40
77 78 2.079158 CACGAGTGCTGGTGATGAAAT 58.921 47.619 8.36 0.00 41.03 2.17
78 79 1.511850 CACGAGTGCTGGTGATGAAA 58.488 50.000 8.36 0.00 41.03 2.69
79 80 3.215642 CACGAGTGCTGGTGATGAA 57.784 52.632 8.36 0.00 41.03 2.57
80 81 4.994744 CACGAGTGCTGGTGATGA 57.005 55.556 8.36 0.00 41.03 2.92
90 91 1.200474 CCACGTATAGCGCACGAGTG 61.200 60.000 23.27 17.93 46.11 3.51
91 92 1.063649 CCACGTATAGCGCACGAGT 59.936 57.895 23.27 7.66 46.11 4.18
92 93 0.305617 TACCACGTATAGCGCACGAG 59.694 55.000 23.27 15.86 46.11 4.18
93 94 0.946528 ATACCACGTATAGCGCACGA 59.053 50.000 23.27 2.26 46.11 4.35
94 95 2.236690 GTATACCACGTATAGCGCACG 58.763 52.381 16.11 16.11 46.11 5.34
95 96 3.272439 TGTATACCACGTATAGCGCAC 57.728 47.619 11.47 0.00 46.11 5.34
96 97 4.455190 TGTATGTATACCACGTATAGCGCA 59.545 41.667 11.47 0.00 36.94 6.09
97 98 4.973396 TGTATGTATACCACGTATAGCGC 58.027 43.478 0.00 0.00 36.94 5.92
98 99 6.372981 TGTTGTATGTATACCACGTATAGCG 58.627 40.000 0.00 0.00 38.31 4.26
99 100 8.752766 ATTGTTGTATGTATACCACGTATAGC 57.247 34.615 0.00 0.00 32.53 2.97
102 103 9.467258 GTGTATTGTTGTATGTATACCACGTAT 57.533 33.333 0.00 0.00 33.12 3.06
103 104 8.685427 AGTGTATTGTTGTATGTATACCACGTA 58.315 33.333 0.00 0.00 33.12 3.57
104 105 7.490079 CAGTGTATTGTTGTATGTATACCACGT 59.510 37.037 0.00 0.00 33.12 4.49
105 106 7.703197 TCAGTGTATTGTTGTATGTATACCACG 59.297 37.037 0.00 0.00 33.12 4.94
106 107 8.814235 GTCAGTGTATTGTTGTATGTATACCAC 58.186 37.037 0.00 0.00 32.33 4.16
107 108 7.982919 GGTCAGTGTATTGTTGTATGTATACCA 59.017 37.037 0.00 0.00 32.33 3.25
108 109 7.982919 TGGTCAGTGTATTGTTGTATGTATACC 59.017 37.037 0.00 0.00 32.33 2.73
109 110 8.814235 GTGGTCAGTGTATTGTTGTATGTATAC 58.186 37.037 0.00 0.00 0.00 1.47
110 111 7.703197 CGTGGTCAGTGTATTGTTGTATGTATA 59.297 37.037 0.00 0.00 0.00 1.47
111 112 6.533723 CGTGGTCAGTGTATTGTTGTATGTAT 59.466 38.462 0.00 0.00 0.00 2.29
112 113 5.865013 CGTGGTCAGTGTATTGTTGTATGTA 59.135 40.000 0.00 0.00 0.00 2.29
113 114 4.688879 CGTGGTCAGTGTATTGTTGTATGT 59.311 41.667 0.00 0.00 0.00 2.29
114 115 4.688879 ACGTGGTCAGTGTATTGTTGTATG 59.311 41.667 0.00 0.00 0.00 2.39
115 116 4.890088 ACGTGGTCAGTGTATTGTTGTAT 58.110 39.130 0.00 0.00 0.00 2.29
116 117 4.202131 TGACGTGGTCAGTGTATTGTTGTA 60.202 41.667 0.00 0.00 37.67 2.41
117 118 3.128349 GACGTGGTCAGTGTATTGTTGT 58.872 45.455 0.00 0.00 32.09 3.32
118 119 3.127589 TGACGTGGTCAGTGTATTGTTG 58.872 45.455 0.00 0.00 37.67 3.33
119 120 3.462483 TGACGTGGTCAGTGTATTGTT 57.538 42.857 0.00 0.00 37.67 2.83
120 121 3.678056 ATGACGTGGTCAGTGTATTGT 57.322 42.857 0.00 0.00 46.04 2.71
121 122 5.049749 TGAAAATGACGTGGTCAGTGTATTG 60.050 40.000 0.00 0.00 46.04 1.90
122 123 5.060506 TGAAAATGACGTGGTCAGTGTATT 58.939 37.500 0.00 0.00 46.04 1.89
123 124 4.637276 TGAAAATGACGTGGTCAGTGTAT 58.363 39.130 0.00 0.00 46.04 2.29
124 125 4.061357 TGAAAATGACGTGGTCAGTGTA 57.939 40.909 0.00 0.00 46.04 2.90
125 126 2.912771 TGAAAATGACGTGGTCAGTGT 58.087 42.857 0.00 0.00 46.04 3.55
126 127 3.303990 CCTTGAAAATGACGTGGTCAGTG 60.304 47.826 0.00 0.00 46.04 3.66
127 128 2.878406 CCTTGAAAATGACGTGGTCAGT 59.122 45.455 0.00 0.00 46.04 3.41
128 129 3.138304 TCCTTGAAAATGACGTGGTCAG 58.862 45.455 0.00 0.00 46.04 3.51
133 134 5.236478 ACTTGTACTCCTTGAAAATGACGTG 59.764 40.000 0.00 0.00 0.00 4.49
139 140 5.696724 CGAGTCACTTGTACTCCTTGAAAAT 59.303 40.000 0.00 0.00 40.24 1.82
143 144 3.483421 TCGAGTCACTTGTACTCCTTGA 58.517 45.455 0.00 0.00 40.24 3.02
151 152 8.651391 TCAAGTTAATTTTCGAGTCACTTGTA 57.349 30.769 12.68 2.00 40.26 2.41
154 155 8.674607 ACTTTCAAGTTAATTTTCGAGTCACTT 58.325 29.630 0.00 0.00 35.21 3.16
163 164 9.689075 GCAACTTTGACTTTCAAGTTAATTTTC 57.311 29.630 0.00 0.00 39.88 2.29
167 168 8.770438 TTTGCAACTTTGACTTTCAAGTTAAT 57.230 26.923 0.00 0.00 39.88 1.40
212 213 5.363101 ACATAGTCAATGGCATGAGTGTAG 58.637 41.667 0.00 2.15 40.16 2.74
213 214 5.357742 ACATAGTCAATGGCATGAGTGTA 57.642 39.130 0.00 0.00 40.16 2.90
214 215 4.194640 GACATAGTCAATGGCATGAGTGT 58.805 43.478 0.00 6.52 43.87 3.55
225 234 3.197766 ACATGGTGTCGGACATAGTCAAT 59.802 43.478 14.78 0.00 33.68 2.57
242 251 7.067496 AGTCAAACTATGGTCCTATACATGG 57.933 40.000 0.00 0.00 0.00 3.66
243 252 8.964476 AAAGTCAAACTATGGTCCTATACATG 57.036 34.615 0.00 0.00 0.00 3.21
244 253 7.926555 CGAAAGTCAAACTATGGTCCTATACAT 59.073 37.037 0.00 0.00 0.00 2.29
245 254 7.123098 TCGAAAGTCAAACTATGGTCCTATACA 59.877 37.037 0.00 0.00 0.00 2.29
246 255 7.486647 TCGAAAGTCAAACTATGGTCCTATAC 58.513 38.462 0.00 0.00 0.00 1.47
247 256 7.649533 TCGAAAGTCAAACTATGGTCCTATA 57.350 36.000 0.00 0.00 0.00 1.31
248 257 6.540438 TCGAAAGTCAAACTATGGTCCTAT 57.460 37.500 0.00 0.00 0.00 2.57
249 258 5.988310 TCGAAAGTCAAACTATGGTCCTA 57.012 39.130 0.00 0.00 0.00 2.94
250 259 4.884668 TCGAAAGTCAAACTATGGTCCT 57.115 40.909 0.00 0.00 0.00 3.85
251 260 5.237779 TGTTTCGAAAGTCAAACTATGGTCC 59.762 40.000 11.66 0.00 34.22 4.46
252 261 6.295039 TGTTTCGAAAGTCAAACTATGGTC 57.705 37.500 11.66 0.00 34.22 4.02
253 262 5.277828 GCTGTTTCGAAAGTCAAACTATGGT 60.278 40.000 11.66 0.00 34.22 3.55
254 263 5.147162 GCTGTTTCGAAAGTCAAACTATGG 58.853 41.667 11.66 0.00 34.22 2.74
255 264 5.621228 GTGCTGTTTCGAAAGTCAAACTATG 59.379 40.000 11.66 0.00 34.22 2.23
256 265 5.558273 CGTGCTGTTTCGAAAGTCAAACTAT 60.558 40.000 11.66 0.00 34.22 2.12
269 278 0.635731 GAGTCGATCGTGCTGTTTCG 59.364 55.000 15.94 0.00 0.00 3.46
273 282 1.098869 ATCAGAGTCGATCGTGCTGT 58.901 50.000 23.24 15.89 0.00 4.40
274 283 1.064654 TCATCAGAGTCGATCGTGCTG 59.935 52.381 15.94 18.80 0.00 4.41
282 291 6.367149 CAGACTTTCAAATTCATCAGAGTCGA 59.633 38.462 0.00 0.00 37.82 4.20
289 298 5.716094 CATGGCAGACTTTCAAATTCATCA 58.284 37.500 0.00 0.00 0.00 3.07
293 303 3.256558 GGCATGGCAGACTTTCAAATTC 58.743 45.455 15.47 0.00 0.00 2.17
308 318 2.043752 TGGCAGACATGGGCATGG 60.044 61.111 0.00 0.00 42.91 3.66
316 326 1.040893 CACATGGGCATGGCAGACAT 61.041 55.000 22.06 12.30 42.91 3.06
317 327 1.679641 CACATGGGCATGGCAGACA 60.680 57.895 22.06 10.37 42.91 3.41
318 328 3.072486 GCACATGGGCATGGCAGAC 62.072 63.158 22.06 4.23 42.91 3.51
319 329 2.756691 GCACATGGGCATGGCAGA 60.757 61.111 22.06 7.16 42.91 4.26
320 330 3.845259 GGCACATGGGCATGGCAG 61.845 66.667 23.88 12.41 42.91 4.85
335 345 6.336842 AGCAGAAATGGATGTATTAATGGC 57.663 37.500 0.00 0.00 0.00 4.40
337 347 9.888878 CTTGTAGCAGAAATGGATGTATTAATG 57.111 33.333 0.00 0.00 0.00 1.90
341 351 9.632638 ATTACTTGTAGCAGAAATGGATGTATT 57.367 29.630 0.00 0.00 0.00 1.89
342 352 9.632638 AATTACTTGTAGCAGAAATGGATGTAT 57.367 29.630 0.00 0.00 0.00 2.29
344 354 7.944729 AATTACTTGTAGCAGAAATGGATGT 57.055 32.000 0.00 0.00 0.00 3.06
345 355 7.641411 CGAAATTACTTGTAGCAGAAATGGATG 59.359 37.037 0.00 0.00 0.00 3.51
347 357 6.876789 TCGAAATTACTTGTAGCAGAAATGGA 59.123 34.615 0.00 0.00 0.00 3.41
349 359 8.015087 TGTTCGAAATTACTTGTAGCAGAAATG 58.985 33.333 0.00 0.00 0.00 2.32
350 360 8.094798 TGTTCGAAATTACTTGTAGCAGAAAT 57.905 30.769 0.00 0.00 0.00 2.17
351 361 7.439955 TCTGTTCGAAATTACTTGTAGCAGAAA 59.560 33.333 0.00 0.00 0.00 2.52
352 362 6.926826 TCTGTTCGAAATTACTTGTAGCAGAA 59.073 34.615 0.00 0.00 0.00 3.02
354 364 6.183360 CCTCTGTTCGAAATTACTTGTAGCAG 60.183 42.308 0.00 0.00 0.00 4.24
360 370 5.238583 ACTCCCTCTGTTCGAAATTACTTG 58.761 41.667 0.00 0.00 0.00 3.16
361 371 5.485209 ACTCCCTCTGTTCGAAATTACTT 57.515 39.130 0.00 0.00 0.00 2.24
363 373 5.963594 ACTACTCCCTCTGTTCGAAATTAC 58.036 41.667 0.00 0.00 0.00 1.89
365 375 5.715753 AGTACTACTCCCTCTGTTCGAAATT 59.284 40.000 0.00 0.00 0.00 1.82
366 376 5.262804 AGTACTACTCCCTCTGTTCGAAAT 58.737 41.667 0.00 0.00 0.00 2.17
368 378 4.019501 AGAGTACTACTCCCTCTGTTCGAA 60.020 45.833 11.94 0.00 46.18 3.71
370 380 3.872771 GAGAGTACTACTCCCTCTGTTCG 59.127 52.174 11.94 0.00 46.18 3.95
371 381 3.872771 CGAGAGTACTACTCCCTCTGTTC 59.127 52.174 11.94 1.98 46.18 3.18
373 383 3.106054 TCGAGAGTACTACTCCCTCTGT 58.894 50.000 11.94 0.00 46.18 3.41
374 384 3.724374 CTCGAGAGTACTACTCCCTCTG 58.276 54.545 6.58 5.80 46.18 3.35
375 385 2.103601 GCTCGAGAGTACTACTCCCTCT 59.896 54.545 18.75 0.00 46.18 3.69
376 386 2.158928 TGCTCGAGAGTACTACTCCCTC 60.159 54.545 18.75 7.36 46.18 4.30
377 387 1.838715 TGCTCGAGAGTACTACTCCCT 59.161 52.381 18.75 0.00 46.18 4.20
378 388 1.941975 GTGCTCGAGAGTACTACTCCC 59.058 57.143 18.75 0.41 46.18 4.30
379 389 1.941975 GGTGCTCGAGAGTACTACTCC 59.058 57.143 18.75 2.94 46.18 3.85
380 390 1.593933 CGGTGCTCGAGAGTACTACTC 59.406 57.143 18.75 8.02 45.38 2.59
381 391 1.654317 CGGTGCTCGAGAGTACTACT 58.346 55.000 18.75 0.00 42.56 2.57
382 392 0.656785 CCGGTGCTCGAGAGTACTAC 59.343 60.000 18.75 4.38 42.56 2.73
383 393 1.094073 GCCGGTGCTCGAGAGTACTA 61.094 60.000 18.75 0.00 42.56 1.82
423 682 2.358737 CGGCGGCTGGTCTTTTCT 60.359 61.111 7.61 0.00 0.00 2.52
424 683 3.431725 CCGGCGGCTGGTCTTTTC 61.432 66.667 19.95 0.00 0.00 2.29
465 726 1.528542 GGGCCCCTCGGATTTTAGC 60.529 63.158 12.23 0.00 0.00 3.09
468 729 2.553330 TTGGGGCCCCTCGGATTTT 61.553 57.895 40.66 0.00 36.94 1.82
797 1082 2.434359 CTGAGAAACGCCGGGGTC 60.434 66.667 25.87 13.50 0.00 4.46
798 1083 4.016706 CCTGAGAAACGCCGGGGT 62.017 66.667 20.00 20.00 0.00 4.95
821 1106 4.451150 CGCGTCCTAGCCAAGCCA 62.451 66.667 0.00 0.00 0.00 4.75
823 1108 2.356818 ATCTCGCGTCCTAGCCAAGC 62.357 60.000 5.77 0.00 0.00 4.01
824 1109 0.318275 GATCTCGCGTCCTAGCCAAG 60.318 60.000 5.77 0.00 0.00 3.61
825 1110 1.734137 GATCTCGCGTCCTAGCCAA 59.266 57.895 5.77 0.00 0.00 4.52
830 1120 2.203451 GGGGGATCTCGCGTCCTA 60.203 66.667 13.27 0.00 36.00 2.94
885 1188 2.365095 GACGAGGATAACCAGCCCGG 62.365 65.000 0.00 0.00 42.50 5.73
908 1211 3.062234 GTCAGAAACCCTAGCGAAAATCG 59.938 47.826 0.00 0.00 43.89 3.34
909 1212 3.062234 CGTCAGAAACCCTAGCGAAAATC 59.938 47.826 0.00 0.00 0.00 2.17
910 1213 3.000727 CGTCAGAAACCCTAGCGAAAAT 58.999 45.455 0.00 0.00 0.00 1.82
911 1214 2.409975 CGTCAGAAACCCTAGCGAAAA 58.590 47.619 0.00 0.00 0.00 2.29
1046 1349 1.148723 GAGGGAGGGAGTCGATCGA 59.851 63.158 15.15 15.15 0.00 3.59
1054 1357 1.268283 AAAAGGCGAGAGGGAGGGAG 61.268 60.000 0.00 0.00 0.00 4.30
1087 1391 2.962253 CGCGGGAAATCGAGGAGC 60.962 66.667 0.00 0.00 0.00 4.70
1238 1542 1.207329 CTAAGTCGGAACCCAGGGAAG 59.793 57.143 14.54 0.00 0.00 3.46
1282 1586 3.536956 ACATACGGATCCAAACACGAT 57.463 42.857 13.41 0.00 0.00 3.73
1509 1814 2.633488 CCTAACAAGCTACTTGCCTCC 58.367 52.381 7.23 0.00 44.43 4.30
1704 2041 4.881019 ACTCCACAGGATAGATACATGC 57.119 45.455 0.00 0.00 0.00 4.06
1723 2060 1.618837 TGCTAGCGAGAAGGTTCAACT 59.381 47.619 10.77 0.00 0.00 3.16
1734 2071 4.871993 ATTTTGAGACAATGCTAGCGAG 57.128 40.909 10.77 4.76 0.00 5.03
1741 2078 5.643664 TGCTGTGATATTTTGAGACAATGC 58.356 37.500 0.00 0.00 0.00 3.56
1745 2082 6.656270 ACTTGATGCTGTGATATTTTGAGACA 59.344 34.615 0.00 0.00 0.00 3.41
1762 2099 4.518211 CCATCTCCCTTCATAACTTGATGC 59.482 45.833 0.00 0.00 33.34 3.91
1808 2145 7.362401 CCAAGTTTCAGAAACAAGGATGATAGG 60.362 40.741 24.85 9.27 43.79 2.57
1865 2202 3.561725 GGCCAGATGATAACAGCTACAAC 59.438 47.826 0.00 0.00 41.00 3.32
1885 2222 8.880878 ATTCAATTTTTATAACATTACGGGGC 57.119 30.769 0.00 0.00 0.00 5.80
1971 2348 7.597743 CCCTACGCATTAGAATTAGTAAACGAT 59.402 37.037 0.00 0.00 0.00 3.73
1992 2369 2.804912 GGTTCTAGGCCCGCCCTAC 61.805 68.421 0.00 0.00 44.08 3.18
2003 2380 2.755650 GTGTGTGACACTGGGTTCTAG 58.244 52.381 17.47 0.00 45.27 2.43
2044 2431 8.774586 CAGACAGTAGCCACATTAAATTATACC 58.225 37.037 0.00 0.00 0.00 2.73
2127 2517 2.093128 AGGTAAATAAGCCACCGGTCAG 60.093 50.000 2.59 0.00 37.42 3.51
2317 2707 4.202409 CCACTCTTCCTCCTGTTCTTCTTT 60.202 45.833 0.00 0.00 0.00 2.52
2419 2809 5.010617 AGGCAACAATTCGTCCAAAATTAGT 59.989 36.000 0.00 0.00 41.41 2.24
2511 2901 4.819630 ACAAAGAAGAAACATGCCGAGTTA 59.180 37.500 0.00 0.00 0.00 2.24
2516 2906 3.060339 GCAAACAAAGAAGAAACATGCCG 60.060 43.478 0.00 0.00 0.00 5.69
2518 2908 8.519492 TTATAGCAAACAAAGAAGAAACATGC 57.481 30.769 0.00 0.00 0.00 4.06
2725 3115 8.908786 ATAGTCAAACAAATCAGAAGTTCAGA 57.091 30.769 5.50 2.64 0.00 3.27
2774 3164 7.819900 ACTCAGTGTAATCAAAATCCTACAGAC 59.180 37.037 0.00 0.00 0.00 3.51
3024 3414 3.192001 CACCCTGAACATCCAGAATTGTG 59.808 47.826 0.00 0.00 36.29 3.33
3496 3892 3.485463 CTTGTTCCCAAGTACCTGACA 57.515 47.619 0.00 0.00 42.61 3.58
3557 3953 2.743938 AGAACAGTACACTGAACGCTG 58.256 47.619 16.05 0.00 46.59 5.18
3840 4237 3.369471 CCTCGCCATTAAGGACTTTCTGA 60.369 47.826 0.00 0.00 41.22 3.27
4114 4513 0.035725 GAACGGGGGTCAACTTAGGG 60.036 60.000 0.00 0.00 0.00 3.53
4129 4528 2.225963 ACTACTGACCTCTTCACGAACG 59.774 50.000 0.00 0.00 0.00 3.95
4382 4785 7.949006 ACCTACTTCTTTTCTCTACCTAACAGA 59.051 37.037 0.00 0.00 0.00 3.41
4401 4807 9.465199 TTGGTTTTAGTTGTTTAGAACCTACTT 57.535 29.630 0.00 0.00 38.17 2.24
4507 4913 3.181439 ACAGAGAAACAAAGAGAAGGGGG 60.181 47.826 0.00 0.00 0.00 5.40
4517 4923 1.934525 TGCGCGTAACAGAGAAACAAA 59.065 42.857 8.43 0.00 0.00 2.83
4535 4941 2.819608 ACCAGTGTAACACAATCCATGC 59.180 45.455 0.00 0.00 41.43 4.06
4684 5090 3.636231 CGGGACAGGCACCTTCCA 61.636 66.667 15.40 0.00 0.00 3.53
4691 5097 4.659172 CTTTGGGCGGGACAGGCA 62.659 66.667 0.00 0.00 38.57 4.75
4713 5119 5.843673 TCCTGCAATAAAGTGACAAACAA 57.156 34.783 0.00 0.00 0.00 2.83
4726 5132 6.855763 AAACATCCTTCAAATCCTGCAATA 57.144 33.333 0.00 0.00 0.00 1.90
4737 5144 7.223584 TGTCAGTATCAGAAAACATCCTTCAA 58.776 34.615 0.00 0.00 0.00 2.69
5206 5614 3.972950 TTTTCGAAATCGGAGTGCAAA 57.027 38.095 12.12 0.00 40.29 3.68
5279 5688 2.722094 TGCAACAAGTTCTGAAGTGGT 58.278 42.857 0.00 0.00 0.00 4.16
5314 5723 7.819900 GTGACAAGTACTGACCTTCTCAATTAT 59.180 37.037 0.00 0.00 0.00 1.28
5356 5766 3.118629 TGCAGAGCCTAGATGAATTTCGT 60.119 43.478 0.00 0.00 0.00 3.85
5397 5807 1.275573 ACGTAAGCAAGGAGTTCCTCC 59.724 52.381 0.22 1.90 47.00 4.30
5406 5816 2.163818 TCCTGTCAACGTAAGCAAGG 57.836 50.000 0.00 0.00 45.62 3.61
5513 5933 3.685139 TTCTGCAACAGGAAGGTAGAG 57.315 47.619 0.00 0.00 31.51 2.43
5568 5988 1.454295 GGGGTCTCTCTCCTCGTCC 60.454 68.421 0.00 0.00 32.92 4.79
5569 5989 1.454295 GGGGGTCTCTCTCCTCGTC 60.454 68.421 0.00 0.00 36.78 4.20
5606 6033 0.755079 CCATCTCCGGCATCTCAGAA 59.245 55.000 0.00 0.00 0.00 3.02
5685 6114 5.882040 TCTGTCCATTTACAAACCCATGTA 58.118 37.500 0.00 0.00 34.75 2.29
5716 6147 8.008844 CAGCGCAAAAACACATTTATTTATGTT 58.991 29.630 11.47 0.00 36.64 2.71
5774 6206 5.506982 GGAATTCTGCTGCAATCCTGTATTC 60.507 44.000 3.02 6.70 0.00 1.75
5799 6232 2.169769 AGAACCAAGACAGGTCAACGAA 59.830 45.455 1.84 0.00 42.25 3.85
5801 6234 1.867233 CAGAACCAAGACAGGTCAACG 59.133 52.381 1.84 0.00 42.25 4.10
5865 6298 2.791383 AGAGCTGCATATCGTCAGTC 57.209 50.000 1.02 0.00 33.09 3.51
5896 6339 4.746535 TTTGCATCCTATGGAACTACGA 57.253 40.909 0.00 0.00 40.40 3.43
5897 6340 6.346598 CGTTATTTGCATCCTATGGAACTACG 60.347 42.308 0.00 1.74 40.40 3.51
5922 6365 2.876581 ACAATGGTCTTGTTTCCCCTC 58.123 47.619 0.00 0.00 0.00 4.30
6025 6535 5.466728 TCTGAAGAATGCTGTGTAACTGAAC 59.533 40.000 0.00 0.00 38.12 3.18
6038 6548 2.336554 TTTGCGCTTCTGAAGAATGC 57.663 45.000 21.06 18.86 36.48 3.56
6072 6583 7.830739 AGAATTGTAAGGCCTTTGTCTTTATG 58.169 34.615 26.08 0.00 37.63 1.90
6123 6645 0.828022 TATGCCGATCCCGTCTTGTT 59.172 50.000 0.00 0.00 0.00 2.83
6132 6654 0.533032 GGTCCTAGCTATGCCGATCC 59.467 60.000 0.00 0.00 0.00 3.36
6248 6771 2.822764 CCGAGGCTGAATTGTAGTACC 58.177 52.381 0.00 0.00 0.00 3.34
6277 6807 9.595823 AAGGATACATACATACACACTTACAAC 57.404 33.333 0.00 0.00 41.41 3.32
6283 6813 8.982723 AGAAAGAAGGATACATACATACACACT 58.017 33.333 0.00 0.00 41.41 3.55
6304 6850 7.873910 AGAGAAAGAGAGAAAAATGCAGAAAG 58.126 34.615 0.00 0.00 0.00 2.62
6307 6853 7.718753 AGAAAGAGAAAGAGAGAAAAATGCAGA 59.281 33.333 0.00 0.00 0.00 4.26
6478 7044 2.637872 TGGTACTGTTAGGCTCAAGCTT 59.362 45.455 0.00 0.00 41.70 3.74
6519 8548 0.674895 GCCGGCATTCTCACTCACTT 60.675 55.000 24.80 0.00 0.00 3.16
6531 8562 2.515901 GGATGGTAAGGCCGGCAT 59.484 61.111 30.85 21.35 41.21 4.40
6534 8565 2.339275 GAAGGGGATGGTAAGGCCGG 62.339 65.000 0.00 0.00 41.21 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.