Multiple sequence alignment - TraesCS6D01G081800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G081800 chr6D 100.000 3053 0 0 1 3053 47268162 47265110 0.000000e+00 5638.0
1 TraesCS6D01G081800 chr6D 88.450 1013 117 0 1054 2066 56295914 56294902 0.000000e+00 1223.0
2 TraesCS6D01G081800 chr6B 89.587 2084 122 30 455 2465 124465492 124467553 0.000000e+00 2558.0
3 TraesCS6D01G081800 chr6B 87.488 1015 124 1 1052 2066 126728807 126727796 0.000000e+00 1168.0
4 TraesCS6D01G081800 chr6B 80.444 450 43 23 1 440 124464763 124465177 4.950000e-78 302.0
5 TraesCS6D01G081800 chr6B 85.632 174 24 1 2463 2635 76358061 76358234 6.720000e-42 182.0
6 TraesCS6D01G081800 chr6B 94.444 108 2 1 2676 2783 124468524 124468627 2.440000e-36 163.0
7 TraesCS6D01G081800 chr6A 94.152 1522 54 13 571 2069 68501638 68503147 0.000000e+00 2285.0
8 TraesCS6D01G081800 chr6A 87.278 1014 129 0 1053 2066 70935448 70934435 0.000000e+00 1158.0
9 TraesCS6D01G081800 chr6A 85.156 128 18 1 2260 2386 68506360 68506487 2.470000e-26 130.0
10 TraesCS6D01G081800 chr7D 92.568 296 22 0 1272 1567 518063471 518063766 2.810000e-115 425.0
11 TraesCS6D01G081800 chr7D 84.058 138 19 2 2218 2353 84177787 84177651 2.470000e-26 130.0
12 TraesCS6D01G081800 chr3A 96.585 205 7 0 1585 1789 31569977 31570181 1.050000e-89 340.0
13 TraesCS6D01G081800 chr3A 83.333 138 20 2 2218 2353 12565722 12565586 1.150000e-24 124.0
14 TraesCS6D01G081800 chr7A 95.238 210 10 0 1580 1789 729889830 729890039 1.750000e-87 333.0
15 TraesCS6D01G081800 chr7A 86.792 106 13 1 2113 2217 7131649 7131754 1.920000e-22 117.0
16 TraesCS6D01G081800 chr7A 85.714 98 13 1 2120 2217 57132268 57132364 5.390000e-18 102.0
17 TraesCS6D01G081800 chr4B 91.463 246 16 4 1416 1661 618338949 618339189 1.750000e-87 333.0
18 TraesCS6D01G081800 chr4B 85.632 174 24 1 2463 2635 73615479 73615652 6.720000e-42 182.0
19 TraesCS6D01G081800 chr4B 85.057 174 25 1 2463 2635 174041645 174041472 3.130000e-40 176.0
20 TraesCS6D01G081800 chr5A 95.610 205 9 0 1585 1789 2738986 2738782 2.270000e-86 329.0
21 TraesCS6D01G081800 chr5A 83.486 109 18 0 2109 2217 558239481 558239373 5.390000e-18 102.0
22 TraesCS6D01G081800 chr5B 96.020 201 8 0 1589 1789 591662265 591662065 8.160000e-86 327.0
23 TraesCS6D01G081800 chr5B 82.609 138 21 2 2218 2353 360403389 360403253 5.350000e-23 119.0
24 TraesCS6D01G081800 chr7B 87.349 166 20 1 2463 2627 15824192 15824357 4.020000e-44 189.0
25 TraesCS6D01G081800 chr7B 87.755 98 11 1 2120 2217 545728745 545728649 2.490000e-21 113.0
26 TraesCS6D01G081800 chr4A 86.207 174 23 1 2463 2635 702119466 702119639 1.450000e-43 187.0
27 TraesCS6D01G081800 chr4A 85.859 99 11 3 2120 2217 36401449 36401545 5.390000e-18 102.0
28 TraesCS6D01G081800 chr2B 85.632 174 24 1 2463 2635 87840600 87840427 6.720000e-42 182.0
29 TraesCS6D01G081800 chr2B 84.483 174 26 1 2463 2635 503979680 503979507 1.460000e-38 171.0
30 TraesCS6D01G081800 chr2B 84.483 174 26 1 2463 2635 673678186 673678359 1.460000e-38 171.0
31 TraesCS6D01G081800 chr2B 75.723 346 69 14 1195 1531 209826333 209826672 3.150000e-35 159.0
32 TraesCS6D01G081800 chr1B 86.310 168 22 1 2463 2629 644278631 644278798 6.720000e-42 182.0
33 TraesCS6D01G081800 chr1B 81.884 138 21 3 2218 2353 591107264 591107129 2.490000e-21 113.0
34 TraesCS6D01G081800 chr2A 76.068 351 71 12 1195 1537 150488832 150488487 1.460000e-38 171.0
35 TraesCS6D01G081800 chr2A 82.313 147 20 5 2211 2353 61503304 61503448 4.130000e-24 122.0
36 TraesCS6D01G081800 chr2A 82.609 138 21 2 2218 2353 765293356 765293492 5.350000e-23 119.0
37 TraesCS6D01G081800 chr2A 85.714 98 13 1 2120 2217 690409291 690409387 5.390000e-18 102.0
38 TraesCS6D01G081800 chr2A 84.848 99 12 3 2120 2217 744595615 744595519 2.510000e-16 97.1
39 TraesCS6D01G081800 chr2D 76.012 346 68 14 1195 1531 150918891 150919230 6.770000e-37 165.0
40 TraesCS6D01G081800 chr4D 82.278 158 24 3 2211 2365 455708133 455708289 1.910000e-27 134.0
41 TraesCS6D01G081800 chr3B 82.979 141 15 6 2218 2353 693748091 693747955 5.350000e-23 119.0
42 TraesCS6D01G081800 chr3B 85.870 92 13 0 2118 2209 826288180 826288089 6.970000e-17 99.0
43 TraesCS6D01G081800 chr1A 86.735 98 12 1 2120 2217 42225884 42225980 1.160000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G081800 chr6D 47265110 47268162 3052 True 5638.000000 5638 100.000000 1 3053 1 chr6D.!!$R1 3052
1 TraesCS6D01G081800 chr6D 56294902 56295914 1012 True 1223.000000 1223 88.450000 1054 2066 1 chr6D.!!$R2 1012
2 TraesCS6D01G081800 chr6B 126727796 126728807 1011 True 1168.000000 1168 87.488000 1052 2066 1 chr6B.!!$R1 1014
3 TraesCS6D01G081800 chr6B 124464763 124468627 3864 False 1007.666667 2558 88.158333 1 2783 3 chr6B.!!$F2 2782
4 TraesCS6D01G081800 chr6A 68501638 68506487 4849 False 1207.500000 2285 89.654000 571 2386 2 chr6A.!!$F1 1815
5 TraesCS6D01G081800 chr6A 70934435 70935448 1013 True 1158.000000 1158 87.278000 1053 2066 1 chr6A.!!$R1 1013

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
564 891 0.037232 CGTTTCTCCCTCAGTGGTCC 60.037 60.0 0.0 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2188 2729 0.107116 GGCTCAGTCTCTCGGAGGTA 60.107 60.0 4.96 0.0 38.48 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.406297 GGAAACCTTCGCTATAGATTTGATTTT 58.594 33.333 3.21 0.00 0.00 1.82
41 42 9.186837 AGATTTGATTTTCATGCTCTTCTATGT 57.813 29.630 0.00 0.00 0.00 2.29
42 43 9.798994 GATTTGATTTTCATGCTCTTCTATGTT 57.201 29.630 0.00 0.00 0.00 2.71
43 44 9.798994 ATTTGATTTTCATGCTCTTCTATGTTC 57.201 29.630 0.00 0.00 0.00 3.18
52 53 8.579006 TCATGCTCTTCTATGTTCATTTTGTTT 58.421 29.630 0.00 0.00 0.00 2.83
65 66 7.175641 TGTTCATTTTGTTTCAAAAACATGGGT 59.824 29.630 10.84 0.00 32.12 4.51
66 67 7.081526 TCATTTTGTTTCAAAAACATGGGTG 57.918 32.000 10.84 4.62 32.12 4.61
67 68 4.954092 TTTGTTTCAAAAACATGGGTGC 57.046 36.364 6.12 0.00 0.00 5.01
68 69 3.616956 TGTTTCAAAAACATGGGTGCA 57.383 38.095 0.00 0.00 0.00 4.57
69 70 3.529533 TGTTTCAAAAACATGGGTGCAG 58.470 40.909 0.00 0.00 0.00 4.41
70 71 2.237393 TTCAAAAACATGGGTGCAGC 57.763 45.000 7.55 7.55 0.00 5.25
71 72 0.392336 TCAAAAACATGGGTGCAGCC 59.608 50.000 28.15 28.15 0.00 4.85
72 73 0.945265 CAAAAACATGGGTGCAGCCG 60.945 55.000 28.67 18.28 38.44 5.52
73 74 1.398958 AAAAACATGGGTGCAGCCGT 61.399 50.000 28.67 26.42 38.44 5.68
74 75 2.086251 AAAACATGGGTGCAGCCGTG 62.086 55.000 41.76 41.76 38.44 4.94
92 93 1.203994 GTGCAAGAATGAGCCAGCAAT 59.796 47.619 0.00 0.00 33.37 3.56
97 98 1.144503 AGAATGAGCCAGCAATAGGGG 59.855 52.381 0.00 0.00 0.00 4.79
116 117 4.862371 GGGGTACAATTATCCCTTCACAA 58.138 43.478 10.31 0.00 44.78 3.33
124 125 7.886338 ACAATTATCCCTTCACAAGAAAGAAC 58.114 34.615 0.00 0.00 32.35 3.01
149 150 5.184892 AGATCCCAATACAAGAACAGCTT 57.815 39.130 0.00 0.00 37.29 3.74
150 151 5.574188 AGATCCCAATACAAGAACAGCTTT 58.426 37.500 0.00 0.00 33.60 3.51
151 152 6.012745 AGATCCCAATACAAGAACAGCTTTT 58.987 36.000 0.00 0.00 33.60 2.27
152 153 6.494835 AGATCCCAATACAAGAACAGCTTTTT 59.505 34.615 0.00 0.00 33.60 1.94
175 176 2.029623 GGACGCAGGGAGTAACAGATA 58.970 52.381 0.00 0.00 0.00 1.98
178 179 3.097614 ACGCAGGGAGTAACAGATAAGT 58.902 45.455 0.00 0.00 0.00 2.24
179 180 3.119101 ACGCAGGGAGTAACAGATAAGTG 60.119 47.826 0.00 0.00 0.00 3.16
180 181 3.119101 CGCAGGGAGTAACAGATAAGTGT 60.119 47.826 0.00 0.00 0.00 3.55
181 182 4.097437 CGCAGGGAGTAACAGATAAGTGTA 59.903 45.833 0.00 0.00 0.00 2.90
182 183 5.349809 GCAGGGAGTAACAGATAAGTGTAC 58.650 45.833 0.00 0.00 0.00 2.90
183 184 5.681695 GCAGGGAGTAACAGATAAGTGTACC 60.682 48.000 0.00 0.00 0.00 3.34
184 185 5.421056 CAGGGAGTAACAGATAAGTGTACCA 59.579 44.000 0.00 0.00 0.00 3.25
185 186 5.421374 AGGGAGTAACAGATAAGTGTACCAC 59.579 44.000 0.00 0.00 34.10 4.16
187 188 6.604795 GGGAGTAACAGATAAGTGTACCACTA 59.395 42.308 0.00 0.00 44.62 2.74
188 189 7.416101 GGGAGTAACAGATAAGTGTACCACTAC 60.416 44.444 0.00 0.00 44.62 2.73
189 190 7.401955 AGTAACAGATAAGTGTACCACTACC 57.598 40.000 0.00 0.00 44.62 3.18
190 191 5.672421 AACAGATAAGTGTACCACTACCC 57.328 43.478 0.00 0.00 44.62 3.69
191 192 4.680407 ACAGATAAGTGTACCACTACCCA 58.320 43.478 0.00 0.00 44.62 4.51
192 193 5.278061 ACAGATAAGTGTACCACTACCCAT 58.722 41.667 0.00 0.00 44.62 4.00
193 194 5.363005 ACAGATAAGTGTACCACTACCCATC 59.637 44.000 0.00 0.18 44.62 3.51
194 195 5.362717 CAGATAAGTGTACCACTACCCATCA 59.637 44.000 0.00 0.00 44.62 3.07
195 196 5.962031 AGATAAGTGTACCACTACCCATCAA 59.038 40.000 0.00 0.00 44.62 2.57
196 197 4.986054 AAGTGTACCACTACCCATCAAA 57.014 40.909 0.00 0.00 44.62 2.69
197 198 4.986054 AGTGTACCACTACCCATCAAAA 57.014 40.909 0.00 0.00 43.46 2.44
198 199 5.313280 AGTGTACCACTACCCATCAAAAA 57.687 39.130 0.00 0.00 43.46 1.94
199 200 5.313712 AGTGTACCACTACCCATCAAAAAG 58.686 41.667 0.00 0.00 43.46 2.27
200 201 5.072600 AGTGTACCACTACCCATCAAAAAGA 59.927 40.000 0.00 0.00 43.46 2.52
201 202 5.766174 GTGTACCACTACCCATCAAAAAGAA 59.234 40.000 0.00 0.00 0.00 2.52
202 203 6.263617 GTGTACCACTACCCATCAAAAAGAAA 59.736 38.462 0.00 0.00 0.00 2.52
203 204 6.834451 TGTACCACTACCCATCAAAAAGAAAA 59.166 34.615 0.00 0.00 0.00 2.29
204 205 6.800072 ACCACTACCCATCAAAAAGAAAAA 57.200 33.333 0.00 0.00 0.00 1.94
235 236 5.023452 TGTATCACTACCACCTGATGAAGT 58.977 41.667 0.00 0.00 0.00 3.01
289 308 1.377202 CCATGACTGACCAACCCGG 60.377 63.158 0.00 0.00 42.50 5.73
314 333 4.507916 CGGAGGAGGAGGAGCGGA 62.508 72.222 0.00 0.00 0.00 5.54
315 334 2.200092 GGAGGAGGAGGAGCGGAT 59.800 66.667 0.00 0.00 0.00 4.18
348 370 1.287730 GAGACGTGGCAGAAGCACAG 61.288 60.000 0.00 0.00 44.61 3.66
446 471 3.141488 CGTAGCGGAGAGGCCAGT 61.141 66.667 5.01 0.00 35.94 4.00
447 472 2.809010 GTAGCGGAGAGGCCAGTC 59.191 66.667 5.01 0.00 35.94 3.51
448 473 2.829003 TAGCGGAGAGGCCAGTCG 60.829 66.667 5.01 4.31 35.94 4.18
449 474 3.339738 TAGCGGAGAGGCCAGTCGA 62.340 63.158 5.01 0.00 35.94 4.20
450 475 4.500116 GCGGAGAGGCCAGTCGAC 62.500 72.222 7.70 7.70 35.94 4.20
451 476 2.752238 CGGAGAGGCCAGTCGACT 60.752 66.667 13.58 13.58 35.94 4.18
452 477 2.888863 GGAGAGGCCAGTCGACTG 59.111 66.667 33.87 33.87 43.40 3.51
458 783 0.613292 AGGCCAGTCGACTGATCAGT 60.613 55.000 40.21 28.23 46.59 3.41
465 790 0.532573 TCGACTGATCAGTGGAAGGC 59.467 55.000 31.08 16.66 41.99 4.35
482 807 1.090052 GGCGATGAGCTTAAAGCCGT 61.090 55.000 10.89 0.00 43.77 5.68
485 810 1.641577 GATGAGCTTAAAGCCGTCGT 58.358 50.000 0.00 0.00 43.77 4.34
509 834 1.135199 CAACGAGAAGTAGGCCGCTAA 60.135 52.381 0.00 0.00 0.00 3.09
513 838 0.175989 AGAAGTAGGCCGCTAAGCAC 59.824 55.000 0.00 0.00 0.00 4.40
515 840 3.262686 GTAGGCCGCTAAGCACGC 61.263 66.667 0.00 0.00 0.00 5.34
516 841 4.524318 TAGGCCGCTAAGCACGCC 62.524 66.667 0.00 0.00 41.94 5.68
526 851 3.980989 AGCACGCCGTGGTTCGTA 61.981 61.111 17.22 0.00 41.72 3.43
541 868 1.589993 CGTAGCGGGTCATGCTCAG 60.590 63.158 0.00 0.00 42.85 3.35
545 872 1.520342 GCGGGTCATGCTCAGAGTC 60.520 63.158 0.00 0.00 0.00 3.36
546 873 1.226802 CGGGTCATGCTCAGAGTCG 60.227 63.158 0.00 0.00 0.00 4.18
557 884 2.163509 CTCAGAGTCGTTTCTCCCTCA 58.836 52.381 0.00 0.00 35.28 3.86
559 886 1.889829 CAGAGTCGTTTCTCCCTCAGT 59.110 52.381 0.00 0.00 35.28 3.41
560 887 1.889829 AGAGTCGTTTCTCCCTCAGTG 59.110 52.381 0.00 0.00 35.28 3.66
561 888 0.969894 AGTCGTTTCTCCCTCAGTGG 59.030 55.000 0.00 0.00 0.00 4.00
564 891 0.037232 CGTTTCTCCCTCAGTGGTCC 60.037 60.000 0.00 0.00 0.00 4.46
566 893 0.178944 TTTCTCCCTCAGTGGTCCGA 60.179 55.000 0.00 0.00 0.00 4.55
567 894 0.041238 TTCTCCCTCAGTGGTCCGAT 59.959 55.000 0.00 0.00 0.00 4.18
568 895 0.041238 TCTCCCTCAGTGGTCCGATT 59.959 55.000 0.00 0.00 0.00 3.34
584 930 4.881850 GTCCGATTTGGTAGGATCACATTT 59.118 41.667 0.00 0.00 39.52 2.32
588 934 6.127758 CCGATTTGGTAGGATCACATTTTTCA 60.128 38.462 0.00 0.00 0.00 2.69
589 935 6.747280 CGATTTGGTAGGATCACATTTTTCAC 59.253 38.462 0.00 0.00 0.00 3.18
590 936 6.968263 TTTGGTAGGATCACATTTTTCACA 57.032 33.333 0.00 0.00 0.00 3.58
591 937 5.957842 TGGTAGGATCACATTTTTCACAC 57.042 39.130 0.00 0.00 0.00 3.82
595 941 2.979813 GGATCACATTTTTCACACGCAC 59.020 45.455 0.00 0.00 0.00 5.34
607 953 0.950555 ACACGCACGCATGATTCACT 60.951 50.000 0.00 0.00 0.00 3.41
608 954 0.998669 CACGCACGCATGATTCACTA 59.001 50.000 0.00 0.00 0.00 2.74
623 969 5.128663 TGATTCACTAATCAGATTCCGGACA 59.871 40.000 1.83 0.00 45.17 4.02
649 995 1.270893 GGCTCCGGAAAGAGACAAAGT 60.271 52.381 5.23 0.00 41.95 2.66
679 1025 3.449918 TCCAGTATCACATGGTTCCAGA 58.550 45.455 0.00 0.00 37.84 3.86
685 1031 1.421268 TCACATGGTTCCAGAACTGCT 59.579 47.619 10.19 0.00 40.94 4.24
688 1034 1.004044 CATGGTTCCAGAACTGCTCCT 59.996 52.381 10.19 0.00 40.94 3.69
760 1106 2.415168 CGCTGACGTGATGTAAACCATT 59.585 45.455 0.00 0.00 31.32 3.16
777 1123 8.953313 GTAAACCATTGGCAATTAAGTAGTAGT 58.047 33.333 10.65 0.00 0.00 2.73
778 1124 7.391148 AACCATTGGCAATTAAGTAGTAGTG 57.609 36.000 10.65 0.00 0.00 2.74
812 1158 7.037438 ACAATGAGAAACCATACAAATCATGC 58.963 34.615 0.00 0.00 0.00 4.06
874 1220 4.039973 TCCAGTCACCGGAACCATATAATC 59.960 45.833 9.46 0.00 0.00 1.75
879 1225 7.878127 CAGTCACCGGAACCATATAATCTAATT 59.122 37.037 9.46 0.00 0.00 1.40
972 1322 0.750249 TCACGGTCACACTCACACAT 59.250 50.000 0.00 0.00 0.00 3.21
1474 1843 2.280524 CCAACCACGTCGCCTTCA 60.281 61.111 0.00 0.00 0.00 3.02
1824 2193 1.302832 CCTGCTGTTCCAGGTGGTC 60.303 63.158 0.10 0.00 45.87 4.02
2010 2379 1.805945 CGCTGCTCGTACAGAACCC 60.806 63.158 10.89 0.00 40.25 4.11
2051 2420 2.233605 ATTGCGTACCGGCAGCACTA 62.234 55.000 17.02 6.00 44.94 2.74
2081 2603 9.590451 AATTAGTGCAAGATTATCACAATTTGG 57.410 29.630 0.78 0.00 33.44 3.28
2160 2701 5.651530 AGTATACACTCATCCTTGTGAACG 58.348 41.667 5.50 0.00 37.59 3.95
2176 2717 2.355126 CGCACGCACTCACACTCT 60.355 61.111 0.00 0.00 0.00 3.24
2188 2729 5.136828 CACTCACACTCTATCCCTATGAGT 58.863 45.833 0.00 0.00 44.59 3.41
2190 2731 6.205853 CACTCACACTCTATCCCTATGAGTAC 59.794 46.154 3.84 0.00 42.50 2.73
2193 2734 5.708230 CACACTCTATCCCTATGAGTACCTC 59.292 48.000 0.00 0.00 38.80 3.85
2194 2735 5.222171 ACACTCTATCCCTATGAGTACCTCC 60.222 48.000 0.00 0.00 38.80 4.30
2206 2747 1.018910 GTACCTCCGAGAGACTGAGC 58.981 60.000 0.00 0.00 0.00 4.26
2209 2750 1.747367 CTCCGAGAGACTGAGCCGT 60.747 63.158 0.00 0.00 0.00 5.68
2235 2776 5.428457 ACATCAACACTCACCCCTATGAATA 59.572 40.000 0.00 0.00 0.00 1.75
2269 5737 2.230025 CACTATCCCTATGAGCACCTCG 59.770 54.545 0.00 0.00 32.35 4.63
2284 5752 2.438614 TCGGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 43.71 6.13
2338 5807 1.071436 GCGCCTTCATAATCGACGAAC 60.071 52.381 0.00 0.00 0.00 3.95
2366 5836 2.436173 TCCCACTGTACACACATCACAA 59.564 45.455 0.00 0.00 33.14 3.33
2369 5839 4.097135 CCCACTGTACACACATCACAAAAA 59.903 41.667 0.00 0.00 33.14 1.94
2372 5842 6.238731 CCACTGTACACACATCACAAAAAGAT 60.239 38.462 0.00 0.00 33.14 2.40
2375 5845 6.502652 TGTACACACATCACAAAAAGATTGG 58.497 36.000 0.00 0.00 0.00 3.16
2397 5867 8.792830 TTGGAATAAATCTAGAACAAGTCTGG 57.207 34.615 0.00 0.00 37.12 3.86
2398 5868 8.146053 TGGAATAAATCTAGAACAAGTCTGGA 57.854 34.615 0.00 0.00 46.77 3.86
2410 5898 4.307432 ACAAGTCTGGAACGTGAAGTATG 58.693 43.478 0.00 0.00 39.44 2.39
2419 5907 6.460781 TGGAACGTGAAGTATGTCATTAAGT 58.539 36.000 0.00 0.00 0.00 2.24
2421 5909 7.442969 TGGAACGTGAAGTATGTCATTAAGTTT 59.557 33.333 0.00 0.00 0.00 2.66
2424 5912 7.793902 ACGTGAAGTATGTCATTAAGTTTGAC 58.206 34.615 1.41 1.41 43.04 3.18
2441 5929 7.039313 AGTTTGACCAAATCTTTAACTCACC 57.961 36.000 0.00 0.00 32.36 4.02
2480 6637 2.453638 GCCTTAGCACGGCGACTTC 61.454 63.158 16.62 0.00 37.87 3.01
2493 6650 2.005451 GCGACTTCCGACTGTCTACTA 58.995 52.381 6.21 0.00 41.76 1.82
2494 6651 2.222999 GCGACTTCCGACTGTCTACTAC 60.223 54.545 6.21 0.00 41.76 2.73
2497 6654 2.999355 ACTTCCGACTGTCTACTACGAC 59.001 50.000 6.21 0.00 34.52 4.34
2500 6657 3.402110 TCCGACTGTCTACTACGACAAA 58.598 45.455 6.21 0.00 42.80 2.83
2513 6670 0.732538 CGACAAATTTTGCCCGGCTC 60.733 55.000 11.61 0.00 0.00 4.70
2516 6673 1.605165 AAATTTTGCCCGGCTCCGA 60.605 52.632 11.61 0.00 42.83 4.55
2518 6675 3.561120 ATTTTGCCCGGCTCCGACA 62.561 57.895 11.61 4.95 42.83 4.35
2536 6693 0.460284 CAAGGAAGGGACGATGACGG 60.460 60.000 0.00 0.00 44.46 4.79
2558 6715 2.908073 CGCACCTTCGGCTTGCTTT 61.908 57.895 0.00 0.00 0.00 3.51
2560 6717 0.169009 GCACCTTCGGCTTGCTTTAG 59.831 55.000 0.00 0.00 0.00 1.85
2562 6719 2.695359 CACCTTCGGCTTGCTTTAGTA 58.305 47.619 0.00 0.00 0.00 1.82
2566 6723 4.156008 ACCTTCGGCTTGCTTTAGTAATTG 59.844 41.667 0.00 0.00 0.00 2.32
2572 6729 6.596106 TCGGCTTGCTTTAGTAATTGTAATCA 59.404 34.615 0.00 0.00 0.00 2.57
2574 6731 7.587757 CGGCTTGCTTTAGTAATTGTAATCATC 59.412 37.037 0.00 0.00 0.00 2.92
2589 6746 4.527509 AATCATCGCTAGGTGGTCTATG 57.472 45.455 0.00 0.00 0.00 2.23
2590 6747 3.223674 TCATCGCTAGGTGGTCTATGA 57.776 47.619 0.00 0.00 0.00 2.15
2591 6748 3.149981 TCATCGCTAGGTGGTCTATGAG 58.850 50.000 0.00 0.00 0.00 2.90
2606 6763 9.167311 GTGGTCTATGAGTCTGAATGTAATTTT 57.833 33.333 0.00 0.00 36.07 1.82
2773 7021 0.721718 GCACCTGTGTCGCTCATTAC 59.278 55.000 0.00 0.00 0.00 1.89
2792 7040 1.243902 CCAGCGTGGTGGTTTTATGT 58.756 50.000 9.90 0.00 31.35 2.29
2793 7041 1.611491 CCAGCGTGGTGGTTTTATGTT 59.389 47.619 9.90 0.00 31.35 2.71
2794 7042 2.606795 CCAGCGTGGTGGTTTTATGTTG 60.607 50.000 9.90 0.00 31.35 3.33
2795 7043 1.611491 AGCGTGGTGGTTTTATGTTGG 59.389 47.619 0.00 0.00 0.00 3.77
2796 7044 1.338655 GCGTGGTGGTTTTATGTTGGT 59.661 47.619 0.00 0.00 0.00 3.67
2797 7045 2.606065 GCGTGGTGGTTTTATGTTGGTC 60.606 50.000 0.00 0.00 0.00 4.02
2798 7046 2.619177 CGTGGTGGTTTTATGTTGGTCA 59.381 45.455 0.00 0.00 0.00 4.02
2799 7047 3.549221 CGTGGTGGTTTTATGTTGGTCAC 60.549 47.826 0.00 0.00 0.00 3.67
2800 7048 2.619177 TGGTGGTTTTATGTTGGTCACG 59.381 45.455 0.00 0.00 0.00 4.35
2801 7049 2.606065 GGTGGTTTTATGTTGGTCACGC 60.606 50.000 0.00 0.00 0.00 5.34
2802 7050 2.033550 GTGGTTTTATGTTGGTCACGCA 59.966 45.455 0.00 0.00 0.00 5.24
2803 7051 2.033550 TGGTTTTATGTTGGTCACGCAC 59.966 45.455 0.00 0.00 0.00 5.34
2812 7060 3.649986 GTCACGCACCGCTGCTTT 61.650 61.111 0.54 0.00 41.77 3.51
2813 7061 3.648982 TCACGCACCGCTGCTTTG 61.649 61.111 0.54 0.00 41.77 2.77
2816 7064 3.422303 CGCACCGCTGCTTTGCTA 61.422 61.111 16.93 0.00 41.77 3.49
2817 7065 2.482374 GCACCGCTGCTTTGCTAG 59.518 61.111 13.28 0.00 40.63 3.42
2818 7066 2.034879 GCACCGCTGCTTTGCTAGA 61.035 57.895 13.28 0.00 40.63 2.43
2819 7067 1.372087 GCACCGCTGCTTTGCTAGAT 61.372 55.000 13.28 0.00 40.63 1.98
2820 7068 1.939974 CACCGCTGCTTTGCTAGATA 58.060 50.000 0.00 0.00 0.00 1.98
2821 7069 1.594862 CACCGCTGCTTTGCTAGATAC 59.405 52.381 0.00 0.00 0.00 2.24
2822 7070 1.207089 ACCGCTGCTTTGCTAGATACA 59.793 47.619 0.00 0.00 0.00 2.29
2823 7071 1.594862 CCGCTGCTTTGCTAGATACAC 59.405 52.381 0.00 0.00 0.00 2.90
2824 7072 1.256376 CGCTGCTTTGCTAGATACACG 59.744 52.381 0.00 0.00 0.00 4.49
2825 7073 1.594862 GCTGCTTTGCTAGATACACGG 59.405 52.381 0.00 0.00 0.00 4.94
2826 7074 2.738643 GCTGCTTTGCTAGATACACGGA 60.739 50.000 0.00 0.00 0.00 4.69
2827 7075 3.521560 CTGCTTTGCTAGATACACGGAA 58.478 45.455 0.00 0.00 0.00 4.30
2828 7076 3.521560 TGCTTTGCTAGATACACGGAAG 58.478 45.455 0.00 0.00 0.00 3.46
2829 7077 3.194755 TGCTTTGCTAGATACACGGAAGA 59.805 43.478 0.00 0.00 0.00 2.87
2830 7078 4.181578 GCTTTGCTAGATACACGGAAGAA 58.818 43.478 0.00 0.00 0.00 2.52
2831 7079 4.811557 GCTTTGCTAGATACACGGAAGAAT 59.188 41.667 0.00 0.00 0.00 2.40
2832 7080 5.294552 GCTTTGCTAGATACACGGAAGAATT 59.705 40.000 0.00 0.00 0.00 2.17
2833 7081 6.183360 GCTTTGCTAGATACACGGAAGAATTT 60.183 38.462 0.00 0.00 0.00 1.82
2834 7082 7.626452 GCTTTGCTAGATACACGGAAGAATTTT 60.626 37.037 0.00 0.00 0.00 1.82
2835 7083 8.780846 TTTGCTAGATACACGGAAGAATTTTA 57.219 30.769 0.00 0.00 0.00 1.52
2836 7084 7.766219 TGCTAGATACACGGAAGAATTTTAC 57.234 36.000 0.00 0.00 0.00 2.01
2837 7085 6.474427 TGCTAGATACACGGAAGAATTTTACG 59.526 38.462 0.00 4.19 0.00 3.18
2838 7086 6.074463 GCTAGATACACGGAAGAATTTTACGG 60.074 42.308 0.00 2.82 0.00 4.02
2839 7087 5.969423 AGATACACGGAAGAATTTTACGGA 58.031 37.500 8.98 0.00 0.00 4.69
2840 7088 6.579865 AGATACACGGAAGAATTTTACGGAT 58.420 36.000 8.98 1.79 0.00 4.18
2841 7089 4.939509 ACACGGAAGAATTTTACGGATG 57.060 40.909 8.98 3.47 0.00 3.51
2842 7090 4.320870 ACACGGAAGAATTTTACGGATGT 58.679 39.130 8.98 3.93 0.00 3.06
2843 7091 4.758165 ACACGGAAGAATTTTACGGATGTT 59.242 37.500 8.98 0.00 0.00 2.71
2844 7092 5.239963 ACACGGAAGAATTTTACGGATGTTT 59.760 36.000 8.98 0.00 0.00 2.83
2845 7093 6.427547 ACACGGAAGAATTTTACGGATGTTTA 59.572 34.615 8.98 0.00 0.00 2.01
2846 7094 6.739550 CACGGAAGAATTTTACGGATGTTTAC 59.260 38.462 8.98 0.00 0.00 2.01
2847 7095 6.427547 ACGGAAGAATTTTACGGATGTTTACA 59.572 34.615 8.98 0.00 0.00 2.41
2848 7096 6.959311 CGGAAGAATTTTACGGATGTTTACAG 59.041 38.462 0.00 0.00 0.00 2.74
2849 7097 7.248437 GGAAGAATTTTACGGATGTTTACAGG 58.752 38.462 0.00 0.00 0.00 4.00
2850 7098 6.190954 AGAATTTTACGGATGTTTACAGGC 57.809 37.500 0.00 0.00 0.00 4.85
2851 7099 5.944007 AGAATTTTACGGATGTTTACAGGCT 59.056 36.000 0.00 0.00 0.00 4.58
2852 7100 6.433093 AGAATTTTACGGATGTTTACAGGCTT 59.567 34.615 0.00 0.00 0.00 4.35
2853 7101 5.365403 TTTTACGGATGTTTACAGGCTTG 57.635 39.130 0.00 0.00 0.00 4.01
2854 7102 1.165270 ACGGATGTTTACAGGCTTGC 58.835 50.000 0.00 0.00 0.00 4.01
2855 7103 1.271379 ACGGATGTTTACAGGCTTGCT 60.271 47.619 0.00 0.00 0.00 3.91
2856 7104 1.131126 CGGATGTTTACAGGCTTGCTG 59.869 52.381 0.00 0.00 0.00 4.41
2857 7105 2.436417 GGATGTTTACAGGCTTGCTGA 58.564 47.619 0.00 0.00 0.00 4.26
2858 7106 2.162408 GGATGTTTACAGGCTTGCTGAC 59.838 50.000 0.00 0.00 0.00 3.51
2859 7107 2.340210 TGTTTACAGGCTTGCTGACA 57.660 45.000 0.00 0.00 0.00 3.58
2860 7108 2.862541 TGTTTACAGGCTTGCTGACAT 58.137 42.857 0.00 0.00 0.00 3.06
2861 7109 2.553602 TGTTTACAGGCTTGCTGACATG 59.446 45.455 0.00 0.00 0.00 3.21
2862 7110 1.825090 TTACAGGCTTGCTGACATGG 58.175 50.000 0.00 0.00 0.00 3.66
2863 7111 0.983467 TACAGGCTTGCTGACATGGA 59.017 50.000 0.00 0.00 0.00 3.41
2864 7112 0.607489 ACAGGCTTGCTGACATGGAC 60.607 55.000 0.00 0.00 0.00 4.02
2865 7113 0.607217 CAGGCTTGCTGACATGGACA 60.607 55.000 0.00 0.00 0.00 4.02
2866 7114 0.322277 AGGCTTGCTGACATGGACAG 60.322 55.000 14.88 14.88 38.27 3.51
2867 7115 0.607489 GGCTTGCTGACATGGACAGT 60.607 55.000 18.51 0.00 37.64 3.55
2868 7116 1.242076 GCTTGCTGACATGGACAGTT 58.758 50.000 18.51 0.00 37.64 3.16
2869 7117 1.068748 GCTTGCTGACATGGACAGTTG 60.069 52.381 18.51 12.09 37.64 3.16
2870 7118 2.224606 CTTGCTGACATGGACAGTTGT 58.775 47.619 18.51 0.00 37.64 3.32
2871 7119 1.596603 TGCTGACATGGACAGTTGTG 58.403 50.000 18.51 0.92 37.64 3.33
2872 7120 1.140652 TGCTGACATGGACAGTTGTGA 59.859 47.619 18.51 2.11 37.64 3.58
2873 7121 2.224597 TGCTGACATGGACAGTTGTGAT 60.225 45.455 18.51 0.00 37.64 3.06
2874 7122 2.816087 GCTGACATGGACAGTTGTGATT 59.184 45.455 18.51 0.00 37.64 2.57
2875 7123 3.365666 GCTGACATGGACAGTTGTGATTG 60.366 47.826 18.51 0.00 37.64 2.67
2876 7124 3.148412 TGACATGGACAGTTGTGATTGG 58.852 45.455 0.00 0.00 0.00 3.16
2877 7125 2.489329 GACATGGACAGTTGTGATTGGG 59.511 50.000 0.00 0.00 0.00 4.12
2878 7126 2.108075 ACATGGACAGTTGTGATTGGGA 59.892 45.455 0.00 0.00 0.00 4.37
2879 7127 2.270352 TGGACAGTTGTGATTGGGAC 57.730 50.000 0.00 0.00 0.00 4.46
2880 7128 1.202879 TGGACAGTTGTGATTGGGACC 60.203 52.381 0.00 0.00 0.00 4.46
2881 7129 1.073923 GGACAGTTGTGATTGGGACCT 59.926 52.381 0.00 0.00 0.00 3.85
2882 7130 2.304761 GGACAGTTGTGATTGGGACCTA 59.695 50.000 0.00 0.00 0.00 3.08
2883 7131 3.600388 GACAGTTGTGATTGGGACCTAG 58.400 50.000 0.00 0.00 0.00 3.02
2884 7132 3.248024 ACAGTTGTGATTGGGACCTAGA 58.752 45.455 0.00 0.00 0.00 2.43
2885 7133 3.261897 ACAGTTGTGATTGGGACCTAGAG 59.738 47.826 0.00 0.00 0.00 2.43
2886 7134 2.237392 AGTTGTGATTGGGACCTAGAGC 59.763 50.000 0.00 0.00 0.00 4.09
2887 7135 2.237392 GTTGTGATTGGGACCTAGAGCT 59.763 50.000 0.00 0.00 0.00 4.09
2888 7136 3.398318 TGTGATTGGGACCTAGAGCTA 57.602 47.619 0.00 0.00 0.00 3.32
2889 7137 3.300388 TGTGATTGGGACCTAGAGCTAG 58.700 50.000 0.00 0.00 0.00 3.42
2898 7146 1.044611 CCTAGAGCTAGGGGTGAAGC 58.955 60.000 14.52 0.00 46.96 3.86
2899 7147 0.671251 CTAGAGCTAGGGGTGAAGCG 59.329 60.000 0.00 0.00 0.00 4.68
2900 7148 0.755698 TAGAGCTAGGGGTGAAGCGG 60.756 60.000 0.00 0.00 0.00 5.52
2901 7149 3.083997 AGCTAGGGGTGAAGCGGG 61.084 66.667 0.00 0.00 0.00 6.13
2902 7150 4.858680 GCTAGGGGTGAAGCGGGC 62.859 72.222 0.00 0.00 0.00 6.13
2903 7151 4.176752 CTAGGGGTGAAGCGGGCC 62.177 72.222 0.00 0.00 0.00 5.80
2908 7156 4.115199 GGTGAAGCGGGCCCATCT 62.115 66.667 24.92 15.63 0.00 2.90
2909 7157 2.514824 GTGAAGCGGGCCCATCTC 60.515 66.667 24.92 14.71 0.00 2.75
2910 7158 3.008517 TGAAGCGGGCCCATCTCA 61.009 61.111 24.92 17.33 0.00 3.27
2911 7159 2.377810 TGAAGCGGGCCCATCTCAT 61.378 57.895 24.92 3.58 0.00 2.90
2912 7160 1.895707 GAAGCGGGCCCATCTCATG 60.896 63.158 24.92 4.06 0.00 3.07
2913 7161 2.329539 GAAGCGGGCCCATCTCATGA 62.330 60.000 24.92 0.00 0.00 3.07
2914 7162 1.925285 AAGCGGGCCCATCTCATGAA 61.925 55.000 24.92 0.00 0.00 2.57
2915 7163 1.453745 GCGGGCCCATCTCATGAAA 60.454 57.895 24.92 0.00 0.00 2.69
2916 7164 1.037030 GCGGGCCCATCTCATGAAAA 61.037 55.000 24.92 0.00 0.00 2.29
2917 7165 1.696063 CGGGCCCATCTCATGAAAAT 58.304 50.000 24.92 0.00 0.00 1.82
2918 7166 1.610522 CGGGCCCATCTCATGAAAATC 59.389 52.381 24.92 0.00 0.00 2.17
2919 7167 2.669781 GGGCCCATCTCATGAAAATCA 58.330 47.619 19.95 0.00 0.00 2.57
2920 7168 2.626743 GGGCCCATCTCATGAAAATCAG 59.373 50.000 19.95 0.00 0.00 2.90
2921 7169 2.626743 GGCCCATCTCATGAAAATCAGG 59.373 50.000 0.00 0.00 0.00 3.86
2922 7170 3.559069 GCCCATCTCATGAAAATCAGGA 58.441 45.455 0.00 0.00 34.53 3.86
2929 7177 5.213913 CTCATGAAAATCAGGAGTTCGTG 57.786 43.478 12.50 9.69 46.65 4.35
2930 7178 4.002982 TCATGAAAATCAGGAGTTCGTGG 58.997 43.478 13.47 2.20 38.34 4.94
2931 7179 2.778299 TGAAAATCAGGAGTTCGTGGG 58.222 47.619 2.40 0.00 33.00 4.61
2932 7180 2.370519 TGAAAATCAGGAGTTCGTGGGA 59.629 45.455 2.40 0.00 33.00 4.37
2933 7181 3.181449 TGAAAATCAGGAGTTCGTGGGAA 60.181 43.478 2.40 0.00 33.00 3.97
2934 7182 2.770164 AATCAGGAGTTCGTGGGAAG 57.230 50.000 2.40 0.00 31.49 3.46
2935 7183 0.250513 ATCAGGAGTTCGTGGGAAGC 59.749 55.000 2.40 0.00 31.49 3.86
2936 7184 1.376037 CAGGAGTTCGTGGGAAGCC 60.376 63.158 0.00 0.00 31.49 4.35
2937 7185 1.536662 AGGAGTTCGTGGGAAGCCT 60.537 57.895 0.00 0.00 34.80 4.58
2938 7186 1.376037 GGAGTTCGTGGGAAGCCTG 60.376 63.158 0.00 0.00 31.49 4.85
2939 7187 1.371558 GAGTTCGTGGGAAGCCTGT 59.628 57.895 0.00 0.00 31.49 4.00
2940 7188 0.606604 GAGTTCGTGGGAAGCCTGTA 59.393 55.000 0.00 0.00 31.49 2.74
2941 7189 1.001633 GAGTTCGTGGGAAGCCTGTAA 59.998 52.381 0.00 0.00 31.49 2.41
2942 7190 1.418637 AGTTCGTGGGAAGCCTGTAAA 59.581 47.619 0.00 0.00 31.49 2.01
2943 7191 1.804748 GTTCGTGGGAAGCCTGTAAAG 59.195 52.381 0.00 0.00 31.49 1.85
2944 7192 0.321298 TCGTGGGAAGCCTGTAAAGC 60.321 55.000 0.00 0.00 0.00 3.51
2945 7193 0.321653 CGTGGGAAGCCTGTAAAGCT 60.322 55.000 0.00 0.00 44.19 3.74
2946 7194 1.454201 GTGGGAAGCCTGTAAAGCTC 58.546 55.000 0.00 0.00 40.49 4.09
2947 7195 0.328258 TGGGAAGCCTGTAAAGCTCC 59.672 55.000 0.00 0.00 40.49 4.70
2948 7196 0.744771 GGGAAGCCTGTAAAGCTCCG 60.745 60.000 0.00 0.00 40.49 4.63
2949 7197 0.036294 GGAAGCCTGTAAAGCTCCGT 60.036 55.000 0.00 0.00 40.49 4.69
2950 7198 1.079503 GAAGCCTGTAAAGCTCCGTG 58.920 55.000 0.00 0.00 40.49 4.94
2951 7199 0.396811 AAGCCTGTAAAGCTCCGTGT 59.603 50.000 0.00 0.00 40.49 4.49
2952 7200 1.263356 AGCCTGTAAAGCTCCGTGTA 58.737 50.000 0.00 0.00 34.91 2.90
2953 7201 1.067071 AGCCTGTAAAGCTCCGTGTAC 60.067 52.381 0.00 0.00 34.91 2.90
2954 7202 1.625616 CCTGTAAAGCTCCGTGTACG 58.374 55.000 0.00 0.00 39.44 3.67
2955 7203 1.068055 CCTGTAAAGCTCCGTGTACGT 60.068 52.381 3.57 0.00 37.74 3.57
2956 7204 2.162208 CCTGTAAAGCTCCGTGTACGTA 59.838 50.000 3.57 0.00 37.74 3.57
2957 7205 3.423571 CTGTAAAGCTCCGTGTACGTAG 58.576 50.000 0.00 0.00 37.74 3.51
2958 7206 2.162208 TGTAAAGCTCCGTGTACGTAGG 59.838 50.000 0.00 0.00 37.74 3.18
2959 7207 1.538047 AAAGCTCCGTGTACGTAGGA 58.462 50.000 0.00 0.00 37.74 2.94
2960 7208 1.760192 AAGCTCCGTGTACGTAGGAT 58.240 50.000 0.00 0.00 37.74 3.24
2961 7209 1.760192 AGCTCCGTGTACGTAGGATT 58.240 50.000 0.00 0.00 37.74 3.01
2962 7210 2.097825 AGCTCCGTGTACGTAGGATTT 58.902 47.619 0.00 0.00 37.74 2.17
2963 7211 2.494870 AGCTCCGTGTACGTAGGATTTT 59.505 45.455 0.00 0.00 37.74 1.82
2964 7212 3.056322 AGCTCCGTGTACGTAGGATTTTT 60.056 43.478 0.00 0.00 37.74 1.94
2965 7213 3.061697 GCTCCGTGTACGTAGGATTTTTG 59.938 47.826 0.00 0.00 37.74 2.44
2966 7214 2.995258 TCCGTGTACGTAGGATTTTTGC 59.005 45.455 0.00 0.00 37.74 3.68
2967 7215 2.997986 CCGTGTACGTAGGATTTTTGCT 59.002 45.455 0.00 0.00 37.74 3.91
2968 7216 3.434299 CCGTGTACGTAGGATTTTTGCTT 59.566 43.478 0.00 0.00 37.74 3.91
2969 7217 4.083696 CCGTGTACGTAGGATTTTTGCTTT 60.084 41.667 0.00 0.00 37.74 3.51
2970 7218 4.843984 CGTGTACGTAGGATTTTTGCTTTG 59.156 41.667 0.00 0.00 34.11 2.77
2971 7219 5.333492 CGTGTACGTAGGATTTTTGCTTTGA 60.333 40.000 0.00 0.00 34.11 2.69
2972 7220 5.849604 GTGTACGTAGGATTTTTGCTTTGAC 59.150 40.000 0.00 0.00 0.00 3.18
2973 7221 5.761234 TGTACGTAGGATTTTTGCTTTGACT 59.239 36.000 0.00 0.00 0.00 3.41
2974 7222 5.108385 ACGTAGGATTTTTGCTTTGACTG 57.892 39.130 0.00 0.00 0.00 3.51
2975 7223 3.914364 CGTAGGATTTTTGCTTTGACTGC 59.086 43.478 0.00 0.00 0.00 4.40
2976 7224 4.320494 CGTAGGATTTTTGCTTTGACTGCT 60.320 41.667 0.00 0.00 0.00 4.24
2977 7225 5.106712 CGTAGGATTTTTGCTTTGACTGCTA 60.107 40.000 0.00 0.00 0.00 3.49
2978 7226 5.382618 AGGATTTTTGCTTTGACTGCTAG 57.617 39.130 0.00 0.00 0.00 3.42
2979 7227 4.219288 AGGATTTTTGCTTTGACTGCTAGG 59.781 41.667 0.00 0.00 0.00 3.02
2980 7228 4.021981 GGATTTTTGCTTTGACTGCTAGGT 60.022 41.667 0.00 0.00 0.00 3.08
2981 7229 3.988379 TTTTGCTTTGACTGCTAGGTG 57.012 42.857 0.00 0.00 0.00 4.00
2982 7230 2.928801 TTGCTTTGACTGCTAGGTGA 57.071 45.000 0.00 0.00 0.00 4.02
2983 7231 2.928801 TGCTTTGACTGCTAGGTGAA 57.071 45.000 0.00 0.00 0.00 3.18
2984 7232 2.771089 TGCTTTGACTGCTAGGTGAAG 58.229 47.619 0.00 0.00 0.00 3.02
2985 7233 2.368548 TGCTTTGACTGCTAGGTGAAGA 59.631 45.455 0.00 0.00 0.00 2.87
2986 7234 2.999355 GCTTTGACTGCTAGGTGAAGAG 59.001 50.000 0.00 0.00 0.00 2.85
2987 7235 3.594134 CTTTGACTGCTAGGTGAAGAGG 58.406 50.000 0.00 0.00 0.00 3.69
2988 7236 2.604912 TGACTGCTAGGTGAAGAGGA 57.395 50.000 0.00 0.00 0.00 3.71
2989 7237 2.451490 TGACTGCTAGGTGAAGAGGAG 58.549 52.381 0.00 0.00 37.19 3.69
2990 7238 2.041755 TGACTGCTAGGTGAAGAGGAGA 59.958 50.000 0.00 0.00 34.94 3.71
2991 7239 3.093057 GACTGCTAGGTGAAGAGGAGAA 58.907 50.000 0.00 0.00 34.94 2.87
2992 7240 3.511477 ACTGCTAGGTGAAGAGGAGAAA 58.489 45.455 0.00 0.00 34.94 2.52
2993 7241 3.904339 ACTGCTAGGTGAAGAGGAGAAAA 59.096 43.478 0.00 0.00 34.94 2.29
2994 7242 4.020662 ACTGCTAGGTGAAGAGGAGAAAAG 60.021 45.833 0.00 0.00 34.94 2.27
2995 7243 3.904339 TGCTAGGTGAAGAGGAGAAAAGT 59.096 43.478 0.00 0.00 0.00 2.66
2996 7244 4.348168 TGCTAGGTGAAGAGGAGAAAAGTT 59.652 41.667 0.00 0.00 0.00 2.66
2997 7245 4.693095 GCTAGGTGAAGAGGAGAAAAGTTG 59.307 45.833 0.00 0.00 0.00 3.16
2998 7246 4.092116 AGGTGAAGAGGAGAAAAGTTGG 57.908 45.455 0.00 0.00 0.00 3.77
2999 7247 3.459969 AGGTGAAGAGGAGAAAAGTTGGT 59.540 43.478 0.00 0.00 0.00 3.67
3000 7248 3.565902 GGTGAAGAGGAGAAAAGTTGGTG 59.434 47.826 0.00 0.00 0.00 4.17
3001 7249 3.565902 GTGAAGAGGAGAAAAGTTGGTGG 59.434 47.826 0.00 0.00 0.00 4.61
3002 7250 3.202151 TGAAGAGGAGAAAAGTTGGTGGT 59.798 43.478 0.00 0.00 0.00 4.16
3003 7251 3.214696 AGAGGAGAAAAGTTGGTGGTG 57.785 47.619 0.00 0.00 0.00 4.17
3004 7252 2.158608 AGAGGAGAAAAGTTGGTGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
3005 7253 1.133482 AGGAGAAAAGTTGGTGGTGGG 60.133 52.381 0.00 0.00 0.00 4.61
3006 7254 1.411074 GGAGAAAAGTTGGTGGTGGGT 60.411 52.381 0.00 0.00 0.00 4.51
3007 7255 2.158579 GGAGAAAAGTTGGTGGTGGGTA 60.159 50.000 0.00 0.00 0.00 3.69
3008 7256 3.499745 GGAGAAAAGTTGGTGGTGGGTAT 60.500 47.826 0.00 0.00 0.00 2.73
3009 7257 4.263594 GGAGAAAAGTTGGTGGTGGGTATA 60.264 45.833 0.00 0.00 0.00 1.47
3010 7258 4.659115 AGAAAAGTTGGTGGTGGGTATAC 58.341 43.478 0.00 0.00 0.00 1.47
3011 7259 3.444792 AAAGTTGGTGGTGGGTATACC 57.555 47.619 13.99 13.99 41.24 2.73
3012 7260 2.354261 AGTTGGTGGTGGGTATACCT 57.646 50.000 21.25 0.00 41.43 3.08
3013 7261 1.913419 AGTTGGTGGTGGGTATACCTG 59.087 52.381 21.25 0.00 41.43 4.00
3014 7262 1.064979 GTTGGTGGTGGGTATACCTGG 60.065 57.143 21.25 0.00 41.43 4.45
3015 7263 1.276140 TGGTGGTGGGTATACCTGGC 61.276 60.000 21.25 11.24 41.43 4.85
3016 7264 1.530283 GTGGTGGGTATACCTGGCC 59.470 63.158 21.25 18.90 41.43 5.36
3017 7265 1.083141 TGGTGGGTATACCTGGCCA 59.917 57.895 21.25 20.93 41.43 5.36
3018 7266 0.328061 TGGTGGGTATACCTGGCCAT 60.328 55.000 21.25 0.00 41.43 4.40
3019 7267 0.400594 GGTGGGTATACCTGGCCATC 59.599 60.000 21.25 7.56 41.11 3.51
3020 7268 1.435256 GTGGGTATACCTGGCCATCT 58.565 55.000 21.25 0.00 41.11 2.90
3021 7269 1.072331 GTGGGTATACCTGGCCATCTG 59.928 57.143 21.25 0.00 41.11 2.90
3022 7270 0.036875 GGGTATACCTGGCCATCTGC 59.963 60.000 21.25 0.00 36.09 4.26
3045 7293 4.090588 CGAGCCGGGCCTACCAAA 62.091 66.667 17.02 0.00 40.22 3.28
3046 7294 2.124695 GAGCCGGGCCTACCAAAG 60.125 66.667 17.02 0.00 40.22 2.77
3047 7295 4.426313 AGCCGGGCCTACCAAAGC 62.426 66.667 17.02 0.00 40.22 3.51
3052 7300 2.124695 GGCCTACCAAAGCCCGAG 60.125 66.667 0.00 0.00 43.76 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 7.804712 AGAGCATGAAAATCAAATCTATAGCG 58.195 34.615 0.00 0.00 0.00 4.26
26 27 7.692460 ACAAAATGAACATAGAAGAGCATGA 57.308 32.000 0.00 0.00 0.00 3.07
38 39 8.189460 CCCATGTTTTTGAAACAAAATGAACAT 58.811 29.630 9.93 14.46 33.42 2.71
39 40 7.175641 ACCCATGTTTTTGAAACAAAATGAACA 59.824 29.630 9.93 11.16 33.42 3.18
40 41 7.484324 CACCCATGTTTTTGAAACAAAATGAAC 59.516 33.333 9.93 6.83 33.42 3.18
41 42 7.533426 CACCCATGTTTTTGAAACAAAATGAA 58.467 30.769 9.93 1.51 33.42 2.57
42 43 6.404074 GCACCCATGTTTTTGAAACAAAATGA 60.404 34.615 9.93 2.06 33.42 2.57
43 44 5.742926 GCACCCATGTTTTTGAAACAAAATG 59.257 36.000 9.93 4.92 33.42 2.32
52 53 0.392336 GGCTGCACCCATGTTTTTGA 59.608 50.000 0.50 0.00 0.00 2.69
66 67 1.136147 CTCATTCTTGCACGGCTGC 59.864 57.895 0.00 0.00 44.52 5.25
67 68 1.136147 GCTCATTCTTGCACGGCTG 59.864 57.895 0.00 0.00 0.00 4.85
68 69 2.042831 GGCTCATTCTTGCACGGCT 61.043 57.895 0.00 0.00 0.00 5.52
69 70 2.262471 CTGGCTCATTCTTGCACGGC 62.262 60.000 0.00 0.00 0.00 5.68
70 71 1.798735 CTGGCTCATTCTTGCACGG 59.201 57.895 0.00 0.00 0.00 4.94
71 72 1.136147 GCTGGCTCATTCTTGCACG 59.864 57.895 0.00 0.00 0.00 5.34
72 73 0.599558 TTGCTGGCTCATTCTTGCAC 59.400 50.000 0.00 0.00 0.00 4.57
73 74 1.552578 ATTGCTGGCTCATTCTTGCA 58.447 45.000 0.00 0.00 0.00 4.08
74 75 2.034305 CCTATTGCTGGCTCATTCTTGC 59.966 50.000 0.00 0.00 0.00 4.01
75 76 2.621998 CCCTATTGCTGGCTCATTCTTG 59.378 50.000 0.00 0.00 0.00 3.02
84 85 2.364972 ATTGTACCCCTATTGCTGGC 57.635 50.000 0.00 0.00 0.00 4.85
97 98 8.561738 TCTTTCTTGTGAAGGGATAATTGTAC 57.438 34.615 0.00 0.00 33.28 2.90
116 117 4.469945 TGTATTGGGATCTCCGTTCTTTCT 59.530 41.667 0.00 0.00 38.76 2.52
124 125 4.122776 CTGTTCTTGTATTGGGATCTCCG 58.877 47.826 0.00 0.00 38.76 4.63
149 150 0.680618 TACTCCCTGCGTCCGAAAAA 59.319 50.000 0.00 0.00 0.00 1.94
150 151 0.680618 TTACTCCCTGCGTCCGAAAA 59.319 50.000 0.00 0.00 0.00 2.29
151 152 0.037975 GTTACTCCCTGCGTCCGAAA 60.038 55.000 0.00 0.00 0.00 3.46
152 153 1.180456 TGTTACTCCCTGCGTCCGAA 61.180 55.000 0.00 0.00 0.00 4.30
153 154 1.592400 CTGTTACTCCCTGCGTCCGA 61.592 60.000 0.00 0.00 0.00 4.55
155 156 0.824759 ATCTGTTACTCCCTGCGTCC 59.175 55.000 0.00 0.00 0.00 4.79
156 157 3.130693 ACTTATCTGTTACTCCCTGCGTC 59.869 47.826 0.00 0.00 0.00 5.19
158 159 3.119101 ACACTTATCTGTTACTCCCTGCG 60.119 47.826 0.00 0.00 0.00 5.18
159 160 4.473477 ACACTTATCTGTTACTCCCTGC 57.527 45.455 0.00 0.00 0.00 4.85
160 161 5.421056 TGGTACACTTATCTGTTACTCCCTG 59.579 44.000 0.00 0.00 0.00 4.45
162 163 5.927281 TGGTACACTTATCTGTTACTCCC 57.073 43.478 0.00 0.00 0.00 4.30
178 179 5.570205 TCTTTTTGATGGGTAGTGGTACA 57.430 39.130 0.00 0.00 0.00 2.90
179 180 6.887626 TTTCTTTTTGATGGGTAGTGGTAC 57.112 37.500 0.00 0.00 0.00 3.34
180 181 7.899648 TTTTTCTTTTTGATGGGTAGTGGTA 57.100 32.000 0.00 0.00 0.00 3.25
181 182 6.800072 TTTTTCTTTTTGATGGGTAGTGGT 57.200 33.333 0.00 0.00 0.00 4.16
201 202 8.603304 AGGTGGTAGTGATACACTTATCTTTTT 58.397 33.333 9.63 0.00 42.59 1.94
202 203 8.041323 CAGGTGGTAGTGATACACTTATCTTTT 58.959 37.037 9.63 0.00 42.59 2.27
203 204 7.399191 TCAGGTGGTAGTGATACACTTATCTTT 59.601 37.037 9.63 0.00 42.59 2.52
204 205 6.895756 TCAGGTGGTAGTGATACACTTATCTT 59.104 38.462 9.63 0.00 42.59 2.40
205 206 6.432581 TCAGGTGGTAGTGATACACTTATCT 58.567 40.000 9.63 1.25 42.59 1.98
206 207 6.710597 TCAGGTGGTAGTGATACACTTATC 57.289 41.667 9.63 0.00 42.59 1.75
207 208 6.839134 TCATCAGGTGGTAGTGATACACTTAT 59.161 38.462 9.63 0.00 42.59 1.73
208 209 6.192044 TCATCAGGTGGTAGTGATACACTTA 58.808 40.000 9.63 0.00 42.59 2.24
209 210 5.023452 TCATCAGGTGGTAGTGATACACTT 58.977 41.667 9.63 0.00 42.59 3.16
215 216 5.023452 TGTACTTCATCAGGTGGTAGTGAT 58.977 41.667 0.00 0.00 33.52 3.06
216 217 4.219944 GTGTACTTCATCAGGTGGTAGTGA 59.780 45.833 0.00 0.00 0.00 3.41
221 222 2.231478 CTCGTGTACTTCATCAGGTGGT 59.769 50.000 0.00 0.00 0.00 4.16
263 282 2.284625 TCAGTCATGGCCGAGGGT 60.285 61.111 0.00 0.00 0.00 4.34
339 361 0.176680 CGTATCTGCCCTGTGCTTCT 59.823 55.000 0.00 0.00 42.00 2.85
354 376 4.189188 AGTTCTCGCGCGCCGTAT 62.189 61.111 27.95 7.98 38.35 3.06
402 424 0.670854 GCTCCCGTCTGTCAGGAAAC 60.671 60.000 0.00 0.00 0.00 2.78
440 465 0.459237 CACTGATCAGTCGACTGGCC 60.459 60.000 37.82 29.41 43.91 5.36
442 467 1.177401 TCCACTGATCAGTCGACTGG 58.823 55.000 37.82 26.36 43.91 4.00
443 468 2.416566 CCTTCCACTGATCAGTCGACTG 60.417 54.545 34.76 34.76 45.08 3.51
444 469 1.821753 CCTTCCACTGATCAGTCGACT 59.178 52.381 25.58 13.58 40.20 4.18
445 470 1.737363 GCCTTCCACTGATCAGTCGAC 60.737 57.143 25.58 7.70 40.20 4.20
446 471 0.532573 GCCTTCCACTGATCAGTCGA 59.467 55.000 25.58 21.56 40.20 4.20
447 472 0.803768 CGCCTTCCACTGATCAGTCG 60.804 60.000 25.58 19.46 40.20 4.18
448 473 0.532573 TCGCCTTCCACTGATCAGTC 59.467 55.000 25.58 12.18 40.20 3.51
449 474 1.134580 CATCGCCTTCCACTGATCAGT 60.135 52.381 22.89 22.89 43.61 3.41
450 475 1.137675 TCATCGCCTTCCACTGATCAG 59.862 52.381 21.37 21.37 0.00 2.90
451 476 1.137675 CTCATCGCCTTCCACTGATCA 59.862 52.381 0.00 0.00 0.00 2.92
452 477 1.863267 CTCATCGCCTTCCACTGATC 58.137 55.000 0.00 0.00 0.00 2.92
458 783 2.632377 CTTTAAGCTCATCGCCTTCCA 58.368 47.619 0.00 0.00 40.39 3.53
465 790 0.572590 CGACGGCTTTAAGCTCATCG 59.427 55.000 16.89 17.42 41.99 3.84
485 810 1.214589 GCCTACTTCTCGTTGCCGA 59.785 57.895 0.00 0.00 41.73 5.54
518 843 1.216977 CATGACCCGCTACGAACCA 59.783 57.895 0.00 0.00 0.00 3.67
524 849 0.249238 CTCTGAGCATGACCCGCTAC 60.249 60.000 0.00 0.00 40.63 3.58
526 851 1.954362 GACTCTGAGCATGACCCGCT 61.954 60.000 4.19 0.00 44.10 5.52
541 868 1.067495 CCACTGAGGGAGAAACGACTC 60.067 57.143 0.00 0.00 36.31 3.36
545 872 0.037232 GGACCACTGAGGGAGAAACG 60.037 60.000 0.00 0.00 43.89 3.60
546 873 0.037232 CGGACCACTGAGGGAGAAAC 60.037 60.000 0.00 0.00 43.89 2.78
557 884 1.946984 TCCTACCAAATCGGACCACT 58.053 50.000 0.00 0.00 38.63 4.00
559 886 2.169769 GTGATCCTACCAAATCGGACCA 59.830 50.000 0.00 0.00 38.63 4.02
560 887 2.169769 TGTGATCCTACCAAATCGGACC 59.830 50.000 0.00 0.00 38.63 4.46
561 888 3.536956 TGTGATCCTACCAAATCGGAC 57.463 47.619 0.00 0.00 38.63 4.79
564 891 6.747280 GTGAAAAATGTGATCCTACCAAATCG 59.253 38.462 0.00 0.00 0.00 3.34
566 893 7.378181 GTGTGAAAAATGTGATCCTACCAAAT 58.622 34.615 0.00 0.00 0.00 2.32
567 894 6.514212 CGTGTGAAAAATGTGATCCTACCAAA 60.514 38.462 0.00 0.00 0.00 3.28
568 895 5.049060 CGTGTGAAAAATGTGATCCTACCAA 60.049 40.000 0.00 0.00 0.00 3.67
584 930 0.590682 AATCATGCGTGCGTGTGAAA 59.409 45.000 13.31 0.00 34.75 2.69
588 934 0.950555 AGTGAATCATGCGTGCGTGT 60.951 50.000 13.31 0.00 34.75 4.49
589 935 0.998669 TAGTGAATCATGCGTGCGTG 59.001 50.000 7.74 7.74 0.00 5.34
590 936 1.720805 TTAGTGAATCATGCGTGCGT 58.279 45.000 0.00 0.00 0.00 5.24
591 937 2.284952 TGATTAGTGAATCATGCGTGCG 59.715 45.455 0.00 0.00 45.26 5.34
607 953 3.313791 TGGGATGTCCGGAATCTGATTA 58.686 45.455 5.23 0.00 38.76 1.75
608 954 2.105477 CTGGGATGTCCGGAATCTGATT 59.895 50.000 5.23 1.81 44.90 2.57
623 969 1.306997 TCTTTCCGGAGCCTGGGAT 60.307 57.895 3.34 0.00 31.11 3.85
649 995 3.885724 TGTGATACTGGATCTTGCGAA 57.114 42.857 0.87 0.00 35.37 4.70
660 1006 4.633126 CAGTTCTGGAACCATGTGATACTG 59.367 45.833 9.51 0.00 42.06 2.74
661 1007 4.836825 CAGTTCTGGAACCATGTGATACT 58.163 43.478 9.51 0.00 42.06 2.12
664 1010 2.040813 AGCAGTTCTGGAACCATGTGAT 59.959 45.455 9.51 0.00 42.06 3.06
685 1031 3.701542 ACAGACTTGATATTCGCTCAGGA 59.298 43.478 0.00 0.00 0.00 3.86
688 1034 4.081697 TGGAACAGACTTGATATTCGCTCA 60.082 41.667 0.00 0.00 0.00 4.26
760 1106 4.459390 TCGCACTACTACTTAATTGCCA 57.541 40.909 0.00 0.00 0.00 4.92
777 1123 3.994392 GGTTTCTCATTGTACTCTTCGCA 59.006 43.478 0.00 0.00 0.00 5.10
778 1124 3.994392 TGGTTTCTCATTGTACTCTTCGC 59.006 43.478 0.00 0.00 0.00 4.70
812 1158 1.270305 TGCCTCGTTTCTTCCTCACTG 60.270 52.381 0.00 0.00 0.00 3.66
838 1184 1.036707 GACTGGAGGATCTTCCGAGG 58.963 60.000 18.23 13.00 42.75 4.63
874 1220 6.570692 AGCATTTTGGCTGAGATCAAATTAG 58.429 36.000 0.00 0.00 43.89 1.73
879 1225 4.592942 ACTAGCATTTTGGCTGAGATCAA 58.407 39.130 0.00 0.00 45.44 2.57
1126 1477 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
1788 2157 3.299858 CCGACGTAACGCGCGTAG 61.300 66.667 37.93 29.89 46.11 3.51
1854 2223 2.654079 CGTCTTCCCCAGCTGCTCT 61.654 63.158 8.66 0.00 0.00 4.09
1885 2254 4.980805 TGCCTTGTCGGTCGCCAC 62.981 66.667 0.00 0.00 34.25 5.01
2103 2627 2.792890 CGACTTCGATAGTGCTGACAGG 60.793 54.545 4.26 0.00 43.02 4.00
2149 2690 2.202946 TGCGTGCGTTCACAAGGA 60.203 55.556 0.00 0.00 43.28 3.36
2150 2691 2.052237 GTGCGTGCGTTCACAAGG 60.052 61.111 0.00 0.00 43.28 3.61
2151 2692 1.083401 GAGTGCGTGCGTTCACAAG 60.083 57.895 5.13 0.00 43.28 3.16
2154 2695 2.245532 GTGAGTGCGTGCGTTCAC 59.754 61.111 11.15 11.15 39.78 3.18
2160 2701 1.272781 GATAGAGTGTGAGTGCGTGC 58.727 55.000 0.00 0.00 0.00 5.34
2188 2729 0.107116 GGCTCAGTCTCTCGGAGGTA 60.107 60.000 4.96 0.00 38.48 3.08
2190 2731 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
2193 2734 2.041115 TGACGGCTCAGTCTCTCGG 61.041 63.158 0.00 0.00 41.47 4.63
2194 2735 1.135731 GTGACGGCTCAGTCTCTCG 59.864 63.158 0.00 0.00 41.47 4.04
2206 2747 1.148310 GGTGAGTGTTGATGTGACGG 58.852 55.000 0.00 0.00 0.00 4.79
2209 2750 1.434188 AGGGGTGAGTGTTGATGTGA 58.566 50.000 0.00 0.00 0.00 3.58
2235 2776 1.336887 GGATAGTGTGTGAGTGCGTGT 60.337 52.381 0.00 0.00 0.00 4.49
2269 5737 1.965754 AATGCCGGCTCAGTCTCTCC 61.966 60.000 29.70 0.00 0.00 3.71
2284 5752 5.475273 TCGTCAATCTCAAGATGAAATGC 57.525 39.130 0.00 0.00 34.49 3.56
2317 5785 0.384309 TCGTCGATTATGAAGGCGCT 59.616 50.000 7.64 0.00 32.54 5.92
2318 5786 1.071436 GTTCGTCGATTATGAAGGCGC 60.071 52.381 0.00 0.00 33.71 6.53
2338 5807 0.526662 GTGTACAGTGGGAGGAGACG 59.473 60.000 0.00 0.00 0.00 4.18
2372 5842 8.602424 TCCAGACTTGTTCTAGATTTATTCCAA 58.398 33.333 0.00 0.00 31.12 3.53
2375 5845 8.596380 CGTTCCAGACTTGTTCTAGATTTATTC 58.404 37.037 0.00 0.00 31.12 1.75
2389 5859 4.307432 ACATACTTCACGTTCCAGACTTG 58.693 43.478 0.00 0.00 0.00 3.16
2392 5862 3.909430 TGACATACTTCACGTTCCAGAC 58.091 45.455 0.00 0.00 0.00 3.51
2393 5863 4.801330 ATGACATACTTCACGTTCCAGA 57.199 40.909 0.00 0.00 0.00 3.86
2395 5865 6.460781 ACTTAATGACATACTTCACGTTCCA 58.539 36.000 0.00 0.00 0.00 3.53
2396 5866 6.963049 ACTTAATGACATACTTCACGTTCC 57.037 37.500 0.00 0.00 0.00 3.62
2397 5867 8.492748 TCAAACTTAATGACATACTTCACGTTC 58.507 33.333 0.00 0.00 0.00 3.95
2398 5868 8.280497 GTCAAACTTAATGACATACTTCACGTT 58.720 33.333 3.35 0.00 45.13 3.99
2419 5907 7.411486 TTGGTGAGTTAAAGATTTGGTCAAA 57.589 32.000 0.00 0.00 34.46 2.69
2421 5909 5.534654 CCTTGGTGAGTTAAAGATTTGGTCA 59.465 40.000 0.00 0.00 0.00 4.02
2424 5912 4.321974 GCCCTTGGTGAGTTAAAGATTTGG 60.322 45.833 0.00 0.00 0.00 3.28
2438 5926 1.205417 GATCCAAACATGCCCTTGGTG 59.795 52.381 17.03 0.00 42.37 4.17
2439 5927 1.560505 GATCCAAACATGCCCTTGGT 58.439 50.000 17.03 8.33 42.37 3.67
2440 5928 0.457035 CGATCCAAACATGCCCTTGG 59.543 55.000 13.24 13.24 43.00 3.61
2441 5929 1.462616 TCGATCCAAACATGCCCTTG 58.537 50.000 0.00 0.00 0.00 3.61
2473 6630 0.803740 AGTAGACAGTCGGAAGTCGC 59.196 55.000 0.00 4.64 39.67 5.19
2493 6650 1.006688 GCCGGGCAAAATTTGTCGT 60.007 52.632 15.62 0.00 35.72 4.34
2494 6651 0.732538 GAGCCGGGCAAAATTTGTCG 60.733 55.000 23.09 11.10 35.72 4.35
2497 6654 1.445926 CGGAGCCGGGCAAAATTTG 60.446 57.895 23.09 0.57 35.56 2.32
2500 6657 2.750237 GTCGGAGCCGGGCAAAAT 60.750 61.111 23.09 0.00 40.25 1.82
2513 6670 0.460284 CATCGTCCCTTCCTTGTCGG 60.460 60.000 0.00 0.00 0.00 4.79
2516 6673 0.246635 CGTCATCGTCCCTTCCTTGT 59.753 55.000 0.00 0.00 0.00 3.16
2518 6675 1.898154 CCGTCATCGTCCCTTCCTT 59.102 57.895 0.00 0.00 35.01 3.36
2529 6686 4.796231 AGGTGCGTCGCCGTCATC 62.796 66.667 15.88 0.00 39.30 2.92
2545 6702 5.296813 ACAATTACTAAAGCAAGCCGAAG 57.703 39.130 0.00 0.00 0.00 3.79
2553 6710 7.786178 AGCGATGATTACAATTACTAAAGCA 57.214 32.000 0.00 0.00 0.00 3.91
2558 6715 7.014905 ACCACCTAGCGATGATTACAATTACTA 59.985 37.037 0.00 0.00 0.00 1.82
2560 6717 5.989777 ACCACCTAGCGATGATTACAATTAC 59.010 40.000 0.00 0.00 0.00 1.89
2562 6719 5.036117 ACCACCTAGCGATGATTACAATT 57.964 39.130 0.00 0.00 0.00 2.32
2566 6723 5.183331 TCATAGACCACCTAGCGATGATTAC 59.817 44.000 0.00 0.00 0.00 1.89
2572 6729 3.150767 GACTCATAGACCACCTAGCGAT 58.849 50.000 0.00 0.00 0.00 4.58
2574 6731 2.292016 CAGACTCATAGACCACCTAGCG 59.708 54.545 0.00 0.00 0.00 4.26
2673 6897 2.609610 GGCCCACCAGTCACCCTA 60.610 66.667 0.00 0.00 35.26 3.53
2706 6954 3.034635 ACCATCTACACTCCCTAAGCTG 58.965 50.000 0.00 0.00 0.00 4.24
2707 6955 3.406512 ACCATCTACACTCCCTAAGCT 57.593 47.619 0.00 0.00 0.00 3.74
2708 6956 4.489306 AAACCATCTACACTCCCTAAGC 57.511 45.455 0.00 0.00 0.00 3.09
2709 6957 6.338937 GTGTAAACCATCTACACTCCCTAAG 58.661 44.000 5.99 0.00 43.78 2.18
2773 7021 1.243902 ACATAAAACCACCACGCTGG 58.756 50.000 2.92 2.92 45.02 4.85
2783 7031 2.606065 GGTGCGTGACCAACATAAAACC 60.606 50.000 1.23 0.00 45.34 3.27
2784 7032 2.657184 GGTGCGTGACCAACATAAAAC 58.343 47.619 1.23 0.00 45.34 2.43
2785 7033 1.264557 CGGTGCGTGACCAACATAAAA 59.735 47.619 6.57 0.00 46.55 1.52
2786 7034 0.869068 CGGTGCGTGACCAACATAAA 59.131 50.000 6.57 0.00 46.55 1.40
2787 7035 1.570347 GCGGTGCGTGACCAACATAA 61.570 55.000 6.57 0.00 46.55 1.90
2788 7036 2.030401 GCGGTGCGTGACCAACATA 61.030 57.895 6.57 0.00 46.55 2.29
2789 7037 3.353836 GCGGTGCGTGACCAACAT 61.354 61.111 6.57 0.00 46.55 2.71
2790 7038 4.539083 AGCGGTGCGTGACCAACA 62.539 61.111 6.57 0.00 46.55 3.33
2791 7039 4.012895 CAGCGGTGCGTGACCAAC 62.013 66.667 0.00 0.00 46.55 3.77
2801 7049 1.594862 GTATCTAGCAAAGCAGCGGTG 59.405 52.381 10.98 10.98 40.15 4.94
2802 7050 1.207089 TGTATCTAGCAAAGCAGCGGT 59.793 47.619 0.00 0.00 40.15 5.68
2803 7051 1.594862 GTGTATCTAGCAAAGCAGCGG 59.405 52.381 0.00 0.00 40.15 5.52
2804 7052 1.256376 CGTGTATCTAGCAAAGCAGCG 59.744 52.381 0.00 0.00 40.15 5.18
2805 7053 1.594862 CCGTGTATCTAGCAAAGCAGC 59.405 52.381 0.00 0.00 0.00 5.25
2806 7054 3.165058 TCCGTGTATCTAGCAAAGCAG 57.835 47.619 0.00 0.00 0.00 4.24
2807 7055 3.194755 TCTTCCGTGTATCTAGCAAAGCA 59.805 43.478 0.00 0.00 0.00 3.91
2808 7056 3.782046 TCTTCCGTGTATCTAGCAAAGC 58.218 45.455 0.00 0.00 0.00 3.51
2809 7057 6.910536 AATTCTTCCGTGTATCTAGCAAAG 57.089 37.500 0.00 0.00 0.00 2.77
2810 7058 7.681939 AAAATTCTTCCGTGTATCTAGCAAA 57.318 32.000 0.00 0.00 0.00 3.68
2811 7059 7.009815 CGTAAAATTCTTCCGTGTATCTAGCAA 59.990 37.037 0.00 0.00 0.00 3.91
2812 7060 6.474427 CGTAAAATTCTTCCGTGTATCTAGCA 59.526 38.462 0.00 0.00 0.00 3.49
2813 7061 6.074463 CCGTAAAATTCTTCCGTGTATCTAGC 60.074 42.308 0.00 0.00 0.00 3.42
2814 7062 7.198390 TCCGTAAAATTCTTCCGTGTATCTAG 58.802 38.462 0.00 0.00 0.00 2.43
2815 7063 7.099266 TCCGTAAAATTCTTCCGTGTATCTA 57.901 36.000 0.00 0.00 0.00 1.98
2816 7064 5.969423 TCCGTAAAATTCTTCCGTGTATCT 58.031 37.500 0.00 0.00 0.00 1.98
2817 7065 6.257193 ACATCCGTAAAATTCTTCCGTGTATC 59.743 38.462 0.00 0.00 0.00 2.24
2818 7066 6.110707 ACATCCGTAAAATTCTTCCGTGTAT 58.889 36.000 0.00 0.00 0.00 2.29
2819 7067 5.481105 ACATCCGTAAAATTCTTCCGTGTA 58.519 37.500 0.00 0.00 0.00 2.90
2820 7068 4.320870 ACATCCGTAAAATTCTTCCGTGT 58.679 39.130 0.00 0.00 0.00 4.49
2821 7069 4.939509 ACATCCGTAAAATTCTTCCGTG 57.060 40.909 0.00 0.00 0.00 4.94
2822 7070 5.952526 AAACATCCGTAAAATTCTTCCGT 57.047 34.783 0.00 0.00 0.00 4.69
2823 7071 6.833839 TGTAAACATCCGTAAAATTCTTCCG 58.166 36.000 0.00 0.00 0.00 4.30
2824 7072 7.248437 CCTGTAAACATCCGTAAAATTCTTCC 58.752 38.462 0.00 0.00 0.00 3.46
2825 7073 6.745907 GCCTGTAAACATCCGTAAAATTCTTC 59.254 38.462 0.00 0.00 0.00 2.87
2826 7074 6.433093 AGCCTGTAAACATCCGTAAAATTCTT 59.567 34.615 0.00 0.00 0.00 2.52
2827 7075 5.944007 AGCCTGTAAACATCCGTAAAATTCT 59.056 36.000 0.00 0.00 0.00 2.40
2828 7076 6.190954 AGCCTGTAAACATCCGTAAAATTC 57.809 37.500 0.00 0.00 0.00 2.17
2829 7077 6.386654 CAAGCCTGTAAACATCCGTAAAATT 58.613 36.000 0.00 0.00 0.00 1.82
2830 7078 5.621329 GCAAGCCTGTAAACATCCGTAAAAT 60.621 40.000 0.00 0.00 0.00 1.82
2831 7079 4.320641 GCAAGCCTGTAAACATCCGTAAAA 60.321 41.667 0.00 0.00 0.00 1.52
2832 7080 3.189702 GCAAGCCTGTAAACATCCGTAAA 59.810 43.478 0.00 0.00 0.00 2.01
2833 7081 2.745281 GCAAGCCTGTAAACATCCGTAA 59.255 45.455 0.00 0.00 0.00 3.18
2834 7082 2.027561 AGCAAGCCTGTAAACATCCGTA 60.028 45.455 0.00 0.00 0.00 4.02
2835 7083 1.165270 GCAAGCCTGTAAACATCCGT 58.835 50.000 0.00 0.00 0.00 4.69
2836 7084 1.131126 CAGCAAGCCTGTAAACATCCG 59.869 52.381 0.00 0.00 36.79 4.18
2837 7085 2.162408 GTCAGCAAGCCTGTAAACATCC 59.838 50.000 0.00 0.00 42.38 3.51
2838 7086 2.813754 TGTCAGCAAGCCTGTAAACATC 59.186 45.455 0.00 0.00 42.38 3.06
2839 7087 2.862541 TGTCAGCAAGCCTGTAAACAT 58.137 42.857 0.00 0.00 42.38 2.71
2840 7088 2.340210 TGTCAGCAAGCCTGTAAACA 57.660 45.000 0.00 0.00 42.38 2.83
2841 7089 2.095059 CCATGTCAGCAAGCCTGTAAAC 60.095 50.000 0.00 0.00 42.38 2.01
2842 7090 2.161855 CCATGTCAGCAAGCCTGTAAA 58.838 47.619 0.00 0.00 42.38 2.01
2843 7091 1.350684 TCCATGTCAGCAAGCCTGTAA 59.649 47.619 0.00 0.00 42.38 2.41
2844 7092 0.983467 TCCATGTCAGCAAGCCTGTA 59.017 50.000 0.00 0.00 42.38 2.74
2845 7093 0.607489 GTCCATGTCAGCAAGCCTGT 60.607 55.000 0.00 0.00 42.38 4.00
2846 7094 0.607217 TGTCCATGTCAGCAAGCCTG 60.607 55.000 0.00 0.00 43.17 4.85
2847 7095 0.322277 CTGTCCATGTCAGCAAGCCT 60.322 55.000 0.00 0.00 0.00 4.58
2848 7096 0.607489 ACTGTCCATGTCAGCAAGCC 60.607 55.000 12.92 0.00 36.50 4.35
2849 7097 1.068748 CAACTGTCCATGTCAGCAAGC 60.069 52.381 12.92 0.00 36.50 4.01
2850 7098 2.031420 CACAACTGTCCATGTCAGCAAG 60.031 50.000 12.92 7.41 36.50 4.01
2851 7099 1.948834 CACAACTGTCCATGTCAGCAA 59.051 47.619 12.92 0.00 36.50 3.91
2852 7100 1.140652 TCACAACTGTCCATGTCAGCA 59.859 47.619 12.92 0.00 36.50 4.41
2853 7101 1.882912 TCACAACTGTCCATGTCAGC 58.117 50.000 12.92 0.00 36.50 4.26
2854 7102 3.189910 CCAATCACAACTGTCCATGTCAG 59.810 47.826 11.83 11.83 38.68 3.51
2855 7103 3.148412 CCAATCACAACTGTCCATGTCA 58.852 45.455 0.00 0.00 0.00 3.58
2856 7104 2.489329 CCCAATCACAACTGTCCATGTC 59.511 50.000 0.00 0.00 0.00 3.06
2857 7105 2.108075 TCCCAATCACAACTGTCCATGT 59.892 45.455 0.00 0.00 0.00 3.21
2858 7106 2.489329 GTCCCAATCACAACTGTCCATG 59.511 50.000 0.00 0.00 0.00 3.66
2859 7107 2.555227 GGTCCCAATCACAACTGTCCAT 60.555 50.000 0.00 0.00 0.00 3.41
2860 7108 1.202879 GGTCCCAATCACAACTGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
2861 7109 1.073923 AGGTCCCAATCACAACTGTCC 59.926 52.381 0.00 0.00 0.00 4.02
2862 7110 2.568623 AGGTCCCAATCACAACTGTC 57.431 50.000 0.00 0.00 0.00 3.51
2863 7111 3.248024 TCTAGGTCCCAATCACAACTGT 58.752 45.455 0.00 0.00 0.00 3.55
2864 7112 3.866651 CTCTAGGTCCCAATCACAACTG 58.133 50.000 0.00 0.00 0.00 3.16
2865 7113 2.237392 GCTCTAGGTCCCAATCACAACT 59.763 50.000 0.00 0.00 0.00 3.16
2866 7114 2.237392 AGCTCTAGGTCCCAATCACAAC 59.763 50.000 0.00 0.00 0.00 3.32
2867 7115 2.551270 AGCTCTAGGTCCCAATCACAA 58.449 47.619 0.00 0.00 0.00 3.33
2868 7116 2.254152 AGCTCTAGGTCCCAATCACA 57.746 50.000 0.00 0.00 0.00 3.58
2869 7117 2.630580 CCTAGCTCTAGGTCCCAATCAC 59.369 54.545 13.53 0.00 45.93 3.06
2870 7118 2.964209 CCTAGCTCTAGGTCCCAATCA 58.036 52.381 13.53 0.00 45.93 2.57
2880 7128 0.671251 CGCTTCACCCCTAGCTCTAG 59.329 60.000 0.00 0.00 35.25 2.43
2881 7129 0.755698 CCGCTTCACCCCTAGCTCTA 60.756 60.000 0.00 0.00 35.25 2.43
2882 7130 2.060980 CCGCTTCACCCCTAGCTCT 61.061 63.158 0.00 0.00 35.25 4.09
2883 7131 2.501610 CCGCTTCACCCCTAGCTC 59.498 66.667 0.00 0.00 35.25 4.09
2884 7132 3.083997 CCCGCTTCACCCCTAGCT 61.084 66.667 0.00 0.00 35.25 3.32
2885 7133 4.858680 GCCCGCTTCACCCCTAGC 62.859 72.222 0.00 0.00 0.00 3.42
2886 7134 4.176752 GGCCCGCTTCACCCCTAG 62.177 72.222 0.00 0.00 0.00 3.02
2891 7139 4.115199 AGATGGGCCCGCTTCACC 62.115 66.667 19.37 0.28 0.00 4.02
2892 7140 2.514824 GAGATGGGCCCGCTTCAC 60.515 66.667 19.37 9.04 0.00 3.18
2893 7141 2.377810 ATGAGATGGGCCCGCTTCA 61.378 57.895 19.37 19.89 0.00 3.02
2894 7142 1.895707 CATGAGATGGGCCCGCTTC 60.896 63.158 19.37 14.19 0.00 3.86
2895 7143 1.925285 TTCATGAGATGGGCCCGCTT 61.925 55.000 19.37 3.91 0.00 4.68
2896 7144 1.925285 TTTCATGAGATGGGCCCGCT 61.925 55.000 19.37 17.65 0.00 5.52
2897 7145 1.037030 TTTTCATGAGATGGGCCCGC 61.037 55.000 19.37 12.32 0.00 6.13
2898 7146 1.610522 GATTTTCATGAGATGGGCCCG 59.389 52.381 19.37 0.00 0.00 6.13
2899 7147 2.626743 CTGATTTTCATGAGATGGGCCC 59.373 50.000 17.59 17.59 0.00 5.80
2900 7148 2.626743 CCTGATTTTCATGAGATGGGCC 59.373 50.000 0.00 0.00 0.00 5.80
2901 7149 3.559069 TCCTGATTTTCATGAGATGGGC 58.441 45.455 0.00 0.00 0.00 5.36
2902 7150 4.789807 ACTCCTGATTTTCATGAGATGGG 58.210 43.478 14.22 0.55 40.23 4.00
2903 7151 5.007430 CGAACTCCTGATTTTCATGAGATGG 59.993 44.000 14.22 3.35 40.23 3.51
2904 7152 5.583854 ACGAACTCCTGATTTTCATGAGATG 59.416 40.000 14.22 7.51 40.23 2.90
2905 7153 5.583854 CACGAACTCCTGATTTTCATGAGAT 59.416 40.000 14.22 4.97 40.23 2.75
2906 7154 4.931601 CACGAACTCCTGATTTTCATGAGA 59.068 41.667 14.22 0.00 40.23 3.27
2907 7155 4.093998 CCACGAACTCCTGATTTTCATGAG 59.906 45.833 7.87 7.87 42.44 2.90
2908 7156 4.002982 CCACGAACTCCTGATTTTCATGA 58.997 43.478 0.00 0.00 0.00 3.07
2909 7157 3.127548 CCCACGAACTCCTGATTTTCATG 59.872 47.826 0.00 0.00 0.00 3.07
2910 7158 3.009033 TCCCACGAACTCCTGATTTTCAT 59.991 43.478 0.00 0.00 0.00 2.57
2911 7159 2.370519 TCCCACGAACTCCTGATTTTCA 59.629 45.455 0.00 0.00 0.00 2.69
2912 7160 3.053831 TCCCACGAACTCCTGATTTTC 57.946 47.619 0.00 0.00 0.00 2.29
2913 7161 3.412386 CTTCCCACGAACTCCTGATTTT 58.588 45.455 0.00 0.00 0.00 1.82
2914 7162 2.876079 GCTTCCCACGAACTCCTGATTT 60.876 50.000 0.00 0.00 0.00 2.17
2915 7163 1.339151 GCTTCCCACGAACTCCTGATT 60.339 52.381 0.00 0.00 0.00 2.57
2916 7164 0.250513 GCTTCCCACGAACTCCTGAT 59.749 55.000 0.00 0.00 0.00 2.90
2917 7165 1.671742 GCTTCCCACGAACTCCTGA 59.328 57.895 0.00 0.00 0.00 3.86
2918 7166 1.376037 GGCTTCCCACGAACTCCTG 60.376 63.158 0.00 0.00 0.00 3.86
2919 7167 1.536662 AGGCTTCCCACGAACTCCT 60.537 57.895 0.00 0.00 0.00 3.69
2920 7168 1.376037 CAGGCTTCCCACGAACTCC 60.376 63.158 0.00 0.00 0.00 3.85
2921 7169 0.606604 TACAGGCTTCCCACGAACTC 59.393 55.000 0.00 0.00 0.00 3.01
2922 7170 1.053424 TTACAGGCTTCCCACGAACT 58.947 50.000 0.00 0.00 0.00 3.01
2923 7171 1.804748 CTTTACAGGCTTCCCACGAAC 59.195 52.381 0.00 0.00 0.00 3.95
2924 7172 1.880646 GCTTTACAGGCTTCCCACGAA 60.881 52.381 0.00 0.00 0.00 3.85
2925 7173 0.321298 GCTTTACAGGCTTCCCACGA 60.321 55.000 0.00 0.00 0.00 4.35
2926 7174 0.321653 AGCTTTACAGGCTTCCCACG 60.322 55.000 0.00 0.00 36.56 4.94
2927 7175 1.454201 GAGCTTTACAGGCTTCCCAC 58.546 55.000 0.00 0.00 40.40 4.61
2928 7176 0.328258 GGAGCTTTACAGGCTTCCCA 59.672 55.000 0.00 0.00 40.40 4.37
2929 7177 0.744771 CGGAGCTTTACAGGCTTCCC 60.745 60.000 0.00 0.00 40.40 3.97
2930 7178 0.036294 ACGGAGCTTTACAGGCTTCC 60.036 55.000 0.00 0.00 40.40 3.46
2931 7179 1.079503 CACGGAGCTTTACAGGCTTC 58.920 55.000 0.00 0.00 40.40 3.86
2932 7180 0.396811 ACACGGAGCTTTACAGGCTT 59.603 50.000 0.00 0.00 40.40 4.35
2933 7181 1.067071 GTACACGGAGCTTTACAGGCT 60.067 52.381 0.00 0.00 43.26 4.58
2934 7182 1.356938 GTACACGGAGCTTTACAGGC 58.643 55.000 0.00 0.00 0.00 4.85
2935 7183 1.068055 ACGTACACGGAGCTTTACAGG 60.068 52.381 6.72 0.00 44.95 4.00
2936 7184 2.342910 ACGTACACGGAGCTTTACAG 57.657 50.000 6.72 0.00 44.95 2.74
2937 7185 3.476295 CTACGTACACGGAGCTTTACA 57.524 47.619 0.22 0.00 44.02 2.41
2945 7193 2.995258 GCAAAAATCCTACGTACACGGA 59.005 45.455 6.72 4.67 44.95 4.69
2946 7194 2.997986 AGCAAAAATCCTACGTACACGG 59.002 45.455 6.72 0.00 44.95 4.94
2947 7195 4.657075 AAGCAAAAATCCTACGTACACG 57.343 40.909 0.00 0.00 46.33 4.49
2948 7196 5.849604 GTCAAAGCAAAAATCCTACGTACAC 59.150 40.000 0.00 0.00 0.00 2.90
2949 7197 5.761234 AGTCAAAGCAAAAATCCTACGTACA 59.239 36.000 0.00 0.00 0.00 2.90
2950 7198 6.077838 CAGTCAAAGCAAAAATCCTACGTAC 58.922 40.000 0.00 0.00 0.00 3.67
2951 7199 5.334569 GCAGTCAAAGCAAAAATCCTACGTA 60.335 40.000 0.00 0.00 0.00 3.57
2952 7200 4.556699 GCAGTCAAAGCAAAAATCCTACGT 60.557 41.667 0.00 0.00 0.00 3.57
2953 7201 3.914364 GCAGTCAAAGCAAAAATCCTACG 59.086 43.478 0.00 0.00 0.00 3.51
2954 7202 5.126396 AGCAGTCAAAGCAAAAATCCTAC 57.874 39.130 0.00 0.00 0.00 3.18
2955 7203 5.415701 CCTAGCAGTCAAAGCAAAAATCCTA 59.584 40.000 0.00 0.00 0.00 2.94
2956 7204 4.219288 CCTAGCAGTCAAAGCAAAAATCCT 59.781 41.667 0.00 0.00 0.00 3.24
2957 7205 4.021981 ACCTAGCAGTCAAAGCAAAAATCC 60.022 41.667 0.00 0.00 0.00 3.01
2958 7206 4.919754 CACCTAGCAGTCAAAGCAAAAATC 59.080 41.667 0.00 0.00 0.00 2.17
2959 7207 4.584325 TCACCTAGCAGTCAAAGCAAAAAT 59.416 37.500 0.00 0.00 0.00 1.82
2960 7208 3.951037 TCACCTAGCAGTCAAAGCAAAAA 59.049 39.130 0.00 0.00 0.00 1.94
2961 7209 3.550820 TCACCTAGCAGTCAAAGCAAAA 58.449 40.909 0.00 0.00 0.00 2.44
2962 7210 3.207265 TCACCTAGCAGTCAAAGCAAA 57.793 42.857 0.00 0.00 0.00 3.68
2963 7211 2.928801 TCACCTAGCAGTCAAAGCAA 57.071 45.000 0.00 0.00 0.00 3.91
2964 7212 2.368548 TCTTCACCTAGCAGTCAAAGCA 59.631 45.455 0.00 0.00 0.00 3.91
2965 7213 2.999355 CTCTTCACCTAGCAGTCAAAGC 59.001 50.000 0.00 0.00 0.00 3.51
2966 7214 3.259374 TCCTCTTCACCTAGCAGTCAAAG 59.741 47.826 0.00 0.00 0.00 2.77
2967 7215 3.239449 TCCTCTTCACCTAGCAGTCAAA 58.761 45.455 0.00 0.00 0.00 2.69
2968 7216 2.828520 CTCCTCTTCACCTAGCAGTCAA 59.171 50.000 0.00 0.00 0.00 3.18
2969 7217 2.041755 TCTCCTCTTCACCTAGCAGTCA 59.958 50.000 0.00 0.00 0.00 3.41
2970 7218 2.729194 TCTCCTCTTCACCTAGCAGTC 58.271 52.381 0.00 0.00 0.00 3.51
2971 7219 2.909504 TCTCCTCTTCACCTAGCAGT 57.090 50.000 0.00 0.00 0.00 4.40
2972 7220 4.020662 ACTTTTCTCCTCTTCACCTAGCAG 60.021 45.833 0.00 0.00 0.00 4.24
2973 7221 3.904339 ACTTTTCTCCTCTTCACCTAGCA 59.096 43.478 0.00 0.00 0.00 3.49
2974 7222 4.545208 ACTTTTCTCCTCTTCACCTAGC 57.455 45.455 0.00 0.00 0.00 3.42
2975 7223 5.221742 ACCAACTTTTCTCCTCTTCACCTAG 60.222 44.000 0.00 0.00 0.00 3.02
2976 7224 4.658901 ACCAACTTTTCTCCTCTTCACCTA 59.341 41.667 0.00 0.00 0.00 3.08
2977 7225 3.459969 ACCAACTTTTCTCCTCTTCACCT 59.540 43.478 0.00 0.00 0.00 4.00
2978 7226 3.565902 CACCAACTTTTCTCCTCTTCACC 59.434 47.826 0.00 0.00 0.00 4.02
2979 7227 3.565902 CCACCAACTTTTCTCCTCTTCAC 59.434 47.826 0.00 0.00 0.00 3.18
2980 7228 3.202151 ACCACCAACTTTTCTCCTCTTCA 59.798 43.478 0.00 0.00 0.00 3.02
2981 7229 3.565902 CACCACCAACTTTTCTCCTCTTC 59.434 47.826 0.00 0.00 0.00 2.87
2982 7230 3.555966 CACCACCAACTTTTCTCCTCTT 58.444 45.455 0.00 0.00 0.00 2.85
2983 7231 2.158608 CCACCACCAACTTTTCTCCTCT 60.159 50.000 0.00 0.00 0.00 3.69
2984 7232 2.230660 CCACCACCAACTTTTCTCCTC 58.769 52.381 0.00 0.00 0.00 3.71
2985 7233 1.133482 CCCACCACCAACTTTTCTCCT 60.133 52.381 0.00 0.00 0.00 3.69
2986 7234 1.328279 CCCACCACCAACTTTTCTCC 58.672 55.000 0.00 0.00 0.00 3.71
2987 7235 2.067365 ACCCACCACCAACTTTTCTC 57.933 50.000 0.00 0.00 0.00 2.87
2988 7236 3.895704 ATACCCACCACCAACTTTTCT 57.104 42.857 0.00 0.00 0.00 2.52
2989 7237 3.760151 GGTATACCCACCACCAACTTTTC 59.240 47.826 11.17 0.00 38.55 2.29
2990 7238 3.399983 AGGTATACCCACCACCAACTTTT 59.600 43.478 18.65 0.00 41.40 2.27
2991 7239 2.990998 AGGTATACCCACCACCAACTTT 59.009 45.455 18.65 0.00 41.40 2.66
2992 7240 2.307686 CAGGTATACCCACCACCAACTT 59.692 50.000 18.65 0.00 41.40 2.66
2993 7241 1.913419 CAGGTATACCCACCACCAACT 59.087 52.381 18.65 0.00 41.40 3.16
2994 7242 1.064979 CCAGGTATACCCACCACCAAC 60.065 57.143 18.65 0.00 41.40 3.77
2995 7243 1.291109 CCAGGTATACCCACCACCAA 58.709 55.000 18.65 0.00 41.40 3.67
2996 7244 1.276140 GCCAGGTATACCCACCACCA 61.276 60.000 18.65 0.00 41.40 4.17
2997 7245 1.530283 GCCAGGTATACCCACCACC 59.470 63.158 18.65 0.00 41.40 4.61
2998 7246 1.276140 TGGCCAGGTATACCCACCAC 61.276 60.000 18.65 6.31 41.40 4.16
2999 7247 0.328061 ATGGCCAGGTATACCCACCA 60.328 55.000 23.34 23.34 41.40 4.17
3000 7248 0.400594 GATGGCCAGGTATACCCACC 59.599 60.000 18.65 16.78 39.02 4.61
3001 7249 1.072331 CAGATGGCCAGGTATACCCAC 59.928 57.143 18.65 8.00 36.42 4.61
3002 7250 1.434188 CAGATGGCCAGGTATACCCA 58.566 55.000 18.65 9.54 36.42 4.51
3003 7251 0.036875 GCAGATGGCCAGGTATACCC 59.963 60.000 18.65 3.62 34.35 3.69
3004 7252 3.633361 GCAGATGGCCAGGTATACC 57.367 57.895 13.05 14.54 36.11 2.73
3028 7276 4.090588 TTTGGTAGGCCCGGCTCG 62.091 66.667 9.86 0.00 35.15 5.03
3029 7277 2.124695 CTTTGGTAGGCCCGGCTC 60.125 66.667 9.86 0.00 35.15 4.70
3030 7278 4.426313 GCTTTGGTAGGCCCGGCT 62.426 66.667 9.86 0.34 35.15 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.