Multiple sequence alignment - TraesCS6D01G078900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G078900 chr6D 100.000 6065 0 0 1 6065 44488407 44482343 0.000000e+00 11201.0
1 TraesCS6D01G078900 chr6D 84.577 1206 153 20 3826 5021 44295892 44294710 0.000000e+00 1166.0
2 TraesCS6D01G078900 chr6D 90.980 255 22 1 2771 3025 94757191 94757444 5.820000e-90 342.0
3 TraesCS6D01G078900 chr6D 87.833 263 29 3 2774 3035 410154958 410154698 7.640000e-79 305.0
4 TraesCS6D01G078900 chr6D 85.849 106 14 1 2655 2759 44296859 44296754 1.790000e-20 111.0
5 TraesCS6D01G078900 chr6D 81.618 136 24 1 1509 1644 44424079 44423945 1.790000e-20 111.0
6 TraesCS6D01G078900 chr6B 92.331 2321 136 26 3024 5315 113576754 113574447 0.000000e+00 3262.0
7 TraesCS6D01G078900 chr6B 91.925 1771 70 23 227 1951 113579791 113578048 0.000000e+00 2410.0
8 TraesCS6D01G078900 chr6B 84.909 1206 149 20 3826 5021 113446953 113445771 0.000000e+00 1188.0
9 TraesCS6D01G078900 chr6B 82.502 1223 183 24 3803 5017 113453975 113452776 0.000000e+00 1044.0
10 TraesCS6D01G078900 chr6B 88.312 616 33 16 2166 2756 113577372 113576771 0.000000e+00 702.0
11 TraesCS6D01G078900 chr6B 95.597 159 7 0 1 159 113580765 113580607 7.800000e-64 255.0
12 TraesCS6D01G078900 chr6B 80.114 176 26 6 2588 2760 113447854 113447685 8.260000e-24 122.0
13 TraesCS6D01G078900 chr6B 91.525 59 4 1 1370 1427 715708332 715708390 5.040000e-11 80.5
14 TraesCS6D01G078900 chr6A 95.495 1354 54 6 3747 5097 59300587 59299238 0.000000e+00 2156.0
15 TraesCS6D01G078900 chr6A 90.847 1464 69 25 227 1646 59303838 59302396 0.000000e+00 1901.0
16 TraesCS6D01G078900 chr6A 84.705 1203 150 22 3827 5018 59078741 59077562 0.000000e+00 1171.0
17 TraesCS6D01G078900 chr6A 84.089 1125 104 39 1686 2756 59302390 59301287 0.000000e+00 1016.0
18 TraesCS6D01G078900 chr6A 90.083 726 46 14 3023 3737 59301274 59300564 0.000000e+00 918.0
19 TraesCS6D01G078900 chr6A 97.838 185 4 0 1 185 59304709 59304525 2.730000e-83 320.0
20 TraesCS6D01G078900 chr6A 82.209 163 25 2 1482 1644 59095231 59095073 2.950000e-28 137.0
21 TraesCS6D01G078900 chr6A 80.460 174 26 5 2588 2759 59079928 59079761 6.380000e-25 126.0
22 TraesCS6D01G078900 chr2D 85.170 1234 141 26 3812 5023 552020630 552021843 0.000000e+00 1227.0
23 TraesCS6D01G078900 chr2D 76.207 290 58 10 1987 2266 554161942 554161654 6.340000e-30 143.0
24 TraesCS6D01G078900 chr2B 84.883 1237 142 24 3811 5023 657301028 657302243 0.000000e+00 1206.0
25 TraesCS6D01G078900 chr2A 84.955 1223 143 24 3823 5023 692725786 692726989 0.000000e+00 1201.0
26 TraesCS6D01G078900 chr1A 82.567 1239 189 20 3788 5006 564452366 564451135 0.000000e+00 1066.0
27 TraesCS6D01G078900 chr1A 90.267 750 61 10 5315 6064 218120346 218121083 0.000000e+00 970.0
28 TraesCS6D01G078900 chr1B 82.424 1246 191 17 3782 5004 654049414 654048174 0.000000e+00 1062.0
29 TraesCS6D01G078900 chr1B 87.594 266 31 2 2771 3035 566621923 566622187 2.120000e-79 307.0
30 TraesCS6D01G078900 chr1B 87.594 266 30 3 2771 3034 642774389 642774653 7.640000e-79 305.0
31 TraesCS6D01G078900 chr4D 90.921 760 58 8 5309 6065 329141711 329142462 0.000000e+00 1011.0
32 TraesCS6D01G078900 chr4D 90.387 749 63 7 5319 6065 318591727 318592468 0.000000e+00 976.0
33 TraesCS6D01G078900 chr1D 90.779 770 48 14 5307 6065 114114337 114113580 0.000000e+00 1007.0
34 TraesCS6D01G078900 chr1D 81.947 1130 178 20 3788 4902 470770043 470768925 0.000000e+00 933.0
35 TraesCS6D01G078900 chr1D 89.313 262 27 1 2774 3035 401204822 401204562 1.630000e-85 327.0
36 TraesCS6D01G078900 chr1D 87.452 263 32 1 2771 3033 256107111 256106850 9.880000e-78 302.0
37 TraesCS6D01G078900 chr7D 90.837 753 55 10 5318 6065 51419523 51420266 0.000000e+00 996.0
38 TraesCS6D01G078900 chr7D 90.106 758 62 9 5314 6065 461896273 461895523 0.000000e+00 972.0
39 TraesCS6D01G078900 chr7D 78.351 291 45 10 1990 2266 517149678 517149964 8.080000e-39 172.0
40 TraesCS6D01G078900 chr7D 86.957 69 7 2 1354 1422 427888536 427888602 6.520000e-10 76.8
41 TraesCS6D01G078900 chr7D 90.741 54 5 0 1369 1422 41935259 41935312 8.430000e-09 73.1
42 TraesCS6D01G078900 chr3D 90.704 753 55 11 5315 6065 396430512 396431251 0.000000e+00 989.0
43 TraesCS6D01G078900 chr3D 90.533 750 61 8 5319 6065 604796459 604795717 0.000000e+00 983.0
44 TraesCS6D01G078900 chr3D 81.404 285 44 3 1990 2266 586959456 586959739 2.200000e-54 224.0
45 TraesCS6D01G078900 chr3D 86.364 66 7 2 1357 1422 531846829 531846892 3.030000e-08 71.3
46 TraesCS6D01G078900 chr7A 90.546 751 60 8 5319 6065 703809658 703810401 0.000000e+00 983.0
47 TraesCS6D01G078900 chr3A 91.235 251 20 2 2775 3025 13523180 13523428 2.090000e-89 340.0
48 TraesCS6D01G078900 chr3A 90.909 253 20 3 2774 3025 12408983 12408733 2.710000e-88 337.0
49 TraesCS6D01G078900 chr3A 87.313 268 33 1 2759 3026 742602070 742602336 7.640000e-79 305.0
50 TraesCS6D01G078900 chr5D 90.588 255 23 1 2771 3025 446272056 446272309 2.710000e-88 337.0
51 TraesCS6D01G078900 chr7B 90.514 253 23 1 2774 3026 296755044 296754793 3.500000e-87 333.0
52 TraesCS6D01G078900 chr7B 88.550 262 27 3 2774 3034 2765519 2765260 1.270000e-81 315.0
53 TraesCS6D01G078900 chr7B 87.970 266 28 4 2771 3034 511185945 511186208 1.640000e-80 311.0
54 TraesCS6D01G078900 chr5A 88.889 270 29 1 2756 3025 382088349 382088617 1.260000e-86 331.0
55 TraesCS6D01G078900 chr5A 83.158 285 40 5 1990 2266 430483387 430483671 2.810000e-63 254.0
56 TraesCS6D01G078900 chr5A 84.507 71 9 2 5046 5116 509953339 509953271 1.090000e-07 69.4
57 TraesCS6D01G078900 chr5A 88.889 54 6 0 1368 1421 645125801 645125748 3.920000e-07 67.6
58 TraesCS6D01G078900 chr3B 88.806 268 29 1 2759 3026 206273080 206273346 1.630000e-85 327.0
59 TraesCS6D01G078900 chr3B 88.519 270 28 3 2774 3042 754259795 754259528 2.110000e-84 324.0
60 TraesCS6D01G078900 chr3B 81.119 286 44 4 1989 2266 425063795 425064078 2.850000e-53 220.0
61 TraesCS6D01G078900 chr3B 79.211 279 38 7 1987 2255 150290307 150290039 6.250000e-40 176.0
62 TraesCS6D01G078900 chrUn 81.661 289 43 2 1986 2266 207006613 207006899 1.310000e-56 231.0
63 TraesCS6D01G078900 chr4A 80.132 302 43 9 1990 2276 669838282 669837983 6.160000e-50 209.0
64 TraesCS6D01G078900 chr4A 79.054 296 43 9 1990 2266 500655228 500655523 1.040000e-42 185.0
65 TraesCS6D01G078900 chr4A 87.770 139 15 2 2129 2266 725920301 725920164 1.750000e-35 161.0
66 TraesCS6D01G078900 chr4A 91.525 59 5 0 1369 1427 557657521 557657579 1.400000e-11 82.4
67 TraesCS6D01G078900 chr5B 88.679 53 6 0 1369 1421 38109238 38109186 1.410000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G078900 chr6D 44482343 44488407 6064 True 11201.00 11201 100.00000 1 6065 1 chr6D.!!$R2 6064
1 TraesCS6D01G078900 chr6D 44294710 44296859 2149 True 638.50 1166 85.21300 2655 5021 2 chr6D.!!$R4 2366
2 TraesCS6D01G078900 chr6B 113574447 113580765 6318 True 1657.25 3262 92.04125 1 5315 4 chr6B.!!$R3 5314
3 TraesCS6D01G078900 chr6B 113452776 113453975 1199 True 1044.00 1044 82.50200 3803 5017 1 chr6B.!!$R1 1214
4 TraesCS6D01G078900 chr6B 113445771 113447854 2083 True 655.00 1188 82.51150 2588 5021 2 chr6B.!!$R2 2433
5 TraesCS6D01G078900 chr6A 59299238 59304709 5471 True 1262.20 2156 91.67040 1 5097 5 chr6A.!!$R3 5096
6 TraesCS6D01G078900 chr6A 59077562 59079928 2366 True 648.50 1171 82.58250 2588 5018 2 chr6A.!!$R2 2430
7 TraesCS6D01G078900 chr2D 552020630 552021843 1213 False 1227.00 1227 85.17000 3812 5023 1 chr2D.!!$F1 1211
8 TraesCS6D01G078900 chr2B 657301028 657302243 1215 False 1206.00 1206 84.88300 3811 5023 1 chr2B.!!$F1 1212
9 TraesCS6D01G078900 chr2A 692725786 692726989 1203 False 1201.00 1201 84.95500 3823 5023 1 chr2A.!!$F1 1200
10 TraesCS6D01G078900 chr1A 564451135 564452366 1231 True 1066.00 1066 82.56700 3788 5006 1 chr1A.!!$R1 1218
11 TraesCS6D01G078900 chr1A 218120346 218121083 737 False 970.00 970 90.26700 5315 6064 1 chr1A.!!$F1 749
12 TraesCS6D01G078900 chr1B 654048174 654049414 1240 True 1062.00 1062 82.42400 3782 5004 1 chr1B.!!$R1 1222
13 TraesCS6D01G078900 chr4D 329141711 329142462 751 False 1011.00 1011 90.92100 5309 6065 1 chr4D.!!$F2 756
14 TraesCS6D01G078900 chr4D 318591727 318592468 741 False 976.00 976 90.38700 5319 6065 1 chr4D.!!$F1 746
15 TraesCS6D01G078900 chr1D 114113580 114114337 757 True 1007.00 1007 90.77900 5307 6065 1 chr1D.!!$R1 758
16 TraesCS6D01G078900 chr1D 470768925 470770043 1118 True 933.00 933 81.94700 3788 4902 1 chr1D.!!$R4 1114
17 TraesCS6D01G078900 chr7D 51419523 51420266 743 False 996.00 996 90.83700 5318 6065 1 chr7D.!!$F2 747
18 TraesCS6D01G078900 chr7D 461895523 461896273 750 True 972.00 972 90.10600 5314 6065 1 chr7D.!!$R1 751
19 TraesCS6D01G078900 chr3D 396430512 396431251 739 False 989.00 989 90.70400 5315 6065 1 chr3D.!!$F1 750
20 TraesCS6D01G078900 chr3D 604795717 604796459 742 True 983.00 983 90.53300 5319 6065 1 chr3D.!!$R1 746
21 TraesCS6D01G078900 chr7A 703809658 703810401 743 False 983.00 983 90.54600 5319 6065 1 chr7A.!!$F1 746

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 230 0.099791 TCACATCTTATCGCGACGCA 59.900 50.000 21.35 7.55 0.00 5.24 F
225 234 0.102481 ATCTTATCGCGACGCACCTT 59.898 50.000 21.35 0.00 0.00 3.50 F
1087 1907 0.318699 CTCACTCAACGTCGGCTTCA 60.319 55.000 0.00 0.00 0.00 3.02 F
2033 3130 0.605083 CCGCTGGCTATAGCATCTCA 59.395 55.000 25.53 13.24 43.87 3.27 F
2177 3516 1.195115 AATCTACAGCCCGCTTCTCA 58.805 50.000 0.00 0.00 0.00 3.27 F
2704 4097 1.197036 CTACAGTCGTCGCTTCTGACA 59.803 52.381 15.03 5.49 38.84 3.58 F
3758 5471 1.141254 TGCGGGGTCTAGACTCTAGAG 59.859 57.143 21.97 18.49 30.95 2.43 F
3760 5473 1.418637 CGGGGTCTAGACTCTAGAGCT 59.581 57.143 30.79 18.31 40.69 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2130 3235 0.320421 GCTGTAGCACGGACTCCAAA 60.320 55.000 0.00 0.00 41.59 3.28 R
2160 3265 0.747255 GATGAGAAGCGGGCTGTAGA 59.253 55.000 0.00 0.00 0.00 2.59 R
2161 3266 0.749649 AGATGAGAAGCGGGCTGTAG 59.250 55.000 0.00 0.00 0.00 2.74 R
3738 5451 1.141254 CTCTAGAGTCTAGACCCCGCA 59.859 57.143 23.38 4.33 0.00 5.69 R
3740 5453 1.418637 AGCTCTAGAGTCTAGACCCCG 59.581 57.143 23.38 15.56 0.00 5.73 R
4002 6183 1.585521 CGCTTTCGAGTACGGCGAT 60.586 57.895 16.62 0.00 45.13 4.58 R
4806 7008 0.179137 CGCTCACGCTGTAATCCAGA 60.179 55.000 0.00 0.00 44.49 3.86 R
5214 7422 0.548926 TCCATGGCAAGGGGTGTCTA 60.549 55.000 6.96 0.00 30.97 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 169 9.527157 TCCTTCATAAACCAATTAAACATCAGA 57.473 29.630 0.00 0.00 0.00 3.27
185 194 2.882927 ACTGTCTCAAGCGTGTAACA 57.117 45.000 0.00 4.81 35.74 2.41
186 195 2.470821 ACTGTCTCAAGCGTGTAACAC 58.529 47.619 0.00 0.00 35.74 3.32
187 196 2.159156 ACTGTCTCAAGCGTGTAACACA 60.159 45.455 0.00 0.00 35.74 3.72
188 197 2.863740 CTGTCTCAAGCGTGTAACACAA 59.136 45.455 0.00 0.00 35.74 3.33
190 199 2.221055 GTCTCAAGCGTGTAACACAAGG 59.779 50.000 0.00 0.00 35.74 3.61
191 200 2.101750 TCTCAAGCGTGTAACACAAGGA 59.898 45.455 0.00 0.00 35.74 3.36
192 201 2.869801 CTCAAGCGTGTAACACAAGGAA 59.130 45.455 0.00 0.00 35.74 3.36
193 202 3.472652 TCAAGCGTGTAACACAAGGAAT 58.527 40.909 0.00 0.00 35.74 3.01
194 203 4.633175 TCAAGCGTGTAACACAAGGAATA 58.367 39.130 0.00 0.00 35.74 1.75
195 204 5.242434 TCAAGCGTGTAACACAAGGAATAT 58.758 37.500 0.00 0.00 35.74 1.28
196 205 5.121611 TCAAGCGTGTAACACAAGGAATATG 59.878 40.000 0.00 0.00 35.74 1.78
197 206 3.374058 AGCGTGTAACACAAGGAATATGC 59.626 43.478 3.67 0.00 35.74 3.14
198 207 3.486875 GCGTGTAACACAAGGAATATGCC 60.487 47.826 0.00 0.00 35.74 4.40
199 208 3.242284 CGTGTAACACAAGGAATATGCCG 60.242 47.826 0.00 0.00 35.74 5.69
200 209 3.936453 GTGTAACACAAGGAATATGCCGA 59.064 43.478 0.00 0.00 36.32 5.54
203 212 4.900635 AACACAAGGAATATGCCGATTC 57.099 40.909 0.00 0.13 35.45 2.52
204 213 3.884895 ACACAAGGAATATGCCGATTCA 58.115 40.909 9.24 0.00 37.53 2.57
205 214 3.627577 ACACAAGGAATATGCCGATTCAC 59.372 43.478 9.24 1.04 37.53 3.18
206 215 3.627123 CACAAGGAATATGCCGATTCACA 59.373 43.478 9.24 0.00 37.53 3.58
208 217 4.516698 ACAAGGAATATGCCGATTCACATC 59.483 41.667 9.24 0.00 37.53 3.06
209 218 4.630644 AGGAATATGCCGATTCACATCT 57.369 40.909 9.24 0.00 37.53 2.90
212 221 6.715280 AGGAATATGCCGATTCACATCTTAT 58.285 36.000 9.24 0.00 37.53 1.73
214 223 6.237942 GGAATATGCCGATTCACATCTTATCG 60.238 42.308 9.24 0.00 40.48 2.92
215 224 2.135139 TGCCGATTCACATCTTATCGC 58.865 47.619 0.00 0.00 39.71 4.58
216 225 1.125021 GCCGATTCACATCTTATCGCG 59.875 52.381 0.00 0.00 39.71 5.87
217 226 2.661594 CCGATTCACATCTTATCGCGA 58.338 47.619 13.09 13.09 39.71 5.87
219 228 2.087602 CGATTCACATCTTATCGCGACG 59.912 50.000 12.93 2.74 35.36 5.12
220 229 1.197055 TTCACATCTTATCGCGACGC 58.803 50.000 12.93 10.49 0.00 5.19
221 230 0.099791 TCACATCTTATCGCGACGCA 59.900 50.000 21.35 7.55 0.00 5.24
222 231 0.227234 CACATCTTATCGCGACGCAC 59.773 55.000 21.35 0.00 0.00 5.34
223 232 0.870307 ACATCTTATCGCGACGCACC 60.870 55.000 21.35 0.00 0.00 5.01
224 233 0.595053 CATCTTATCGCGACGCACCT 60.595 55.000 21.35 5.84 0.00 4.00
225 234 0.102481 ATCTTATCGCGACGCACCTT 59.898 50.000 21.35 0.00 0.00 3.50
245 1035 2.739885 ATCGAGGATGCATGTAGCTC 57.260 50.000 2.46 0.00 45.94 4.09
313 1112 5.104259 AGATGTTTTAGATCACCAGGGAC 57.896 43.478 0.00 0.00 0.00 4.46
349 1149 1.999051 CGCGGACATTGTGCTAGTC 59.001 57.895 6.74 0.00 0.00 2.59
406 1206 1.215647 GCGTCGTGGGACTCAGATT 59.784 57.895 0.00 0.00 41.16 2.40
412 1212 3.444388 GTCGTGGGACTCAGATTTCTAGT 59.556 47.826 0.00 0.00 40.15 2.57
457 1257 8.708742 GCATTTGGGTTTAAAGATACACTTTTC 58.291 33.333 0.00 0.00 45.22 2.29
460 1260 9.810545 TTTGGGTTTAAAGATACACTTTTCAAG 57.189 29.630 0.00 0.00 45.22 3.02
503 1303 6.183360 CCCACTAAATGAAGTACGAATCCAAC 60.183 42.308 0.00 0.00 0.00 3.77
605 1405 8.575589 TCTATTTTTGCAACAAAGATGCTCTAA 58.424 29.630 0.00 0.00 44.14 2.10
637 1437 4.665451 TCATGGTGAATGAACATTCCAGT 58.335 39.130 20.15 5.84 44.93 4.00
667 1467 6.866480 TCAGCAGAAAAGACAAAATCAGTTT 58.134 32.000 0.00 0.00 0.00 2.66
707 1508 9.801873 TTAAGTTTCTTTGAGACCTGAAATTTG 57.198 29.630 0.00 0.00 33.03 2.32
711 1512 8.935844 GTTTCTTTGAGACCTGAAATTTGTTTT 58.064 29.630 0.00 0.00 32.22 2.43
712 1513 8.702163 TTCTTTGAGACCTGAAATTTGTTTTC 57.298 30.769 0.00 0.00 43.42 2.29
713 1514 8.066612 TCTTTGAGACCTGAAATTTGTTTTCT 57.933 30.769 0.00 0.00 43.50 2.52
714 1515 8.531146 TCTTTGAGACCTGAAATTTGTTTTCTT 58.469 29.630 0.00 0.00 43.50 2.52
756 1557 4.118410 TCACCATGAAATTTTGCACACAC 58.882 39.130 0.00 0.00 0.00 3.82
877 1684 2.943199 GCTCCCAGAATCCAAGACCTTG 60.943 54.545 2.89 2.89 40.13 3.61
923 1731 4.506802 GGACCAATTCTAGTGTGGGTTTCT 60.507 45.833 11.90 0.00 36.69 2.52
963 1774 2.838202 TGCCCTAGGTACTTTTCCAGAG 59.162 50.000 8.29 0.00 41.75 3.35
1087 1907 0.318699 CTCACTCAACGTCGGCTTCA 60.319 55.000 0.00 0.00 0.00 3.02
1174 1994 2.148916 TAGCGGTAAGGATGCATTCG 57.851 50.000 0.00 0.18 0.00 3.34
1213 2033 8.458843 GCTTTATCTTGTTAATTCCACAGCTAA 58.541 33.333 0.00 0.00 0.00 3.09
1257 2080 5.673568 GCGTTACGTTAGTGTACCTGTGATA 60.674 44.000 6.63 0.00 0.00 2.15
1258 2081 5.734498 CGTTACGTTAGTGTACCTGTGATAC 59.266 44.000 0.00 0.00 0.00 2.24
1261 2096 4.157289 ACGTTAGTGTACCTGTGATACTGG 59.843 45.833 3.68 3.68 42.22 4.00
1273 2108 5.483231 CCTGTGATACTGGTCTATCCATCAT 59.517 44.000 0.00 0.00 46.12 2.45
1313 2148 3.063180 GCAAAAGACAGATCATGAGACGG 59.937 47.826 0.09 1.56 0.00 4.79
1356 2211 7.291566 TCCTTGTCCTTTTAGTGACCAATTTA 58.708 34.615 0.00 0.00 0.00 1.40
1366 2225 9.959721 TTTTAGTGACCAATTTAGCTATCTTCT 57.040 29.630 0.00 0.00 0.00 2.85
1367 2226 9.601217 TTTAGTGACCAATTTAGCTATCTTCTC 57.399 33.333 0.00 0.00 0.00 2.87
1368 2227 7.430760 AGTGACCAATTTAGCTATCTTCTCT 57.569 36.000 0.00 0.00 0.00 3.10
1383 2242 1.089978 TCTCTACTCCTTCCACCCCA 58.910 55.000 0.00 0.00 0.00 4.96
1389 2248 3.451402 ACTCCTTCCACCCCAAATTAC 57.549 47.619 0.00 0.00 0.00 1.89
1490 2356 6.039829 TGAGTACATAACATAGGCTGACTGAG 59.960 42.308 0.00 0.00 0.00 3.35
1507 2373 1.345741 TGAGGGCAACACTTCTCTCTG 59.654 52.381 0.00 0.00 39.74 3.35
1641 2507 7.948278 GAAATACGTGAGCATTTCTACCTAT 57.052 36.000 12.26 0.00 45.83 2.57
1673 2539 1.757731 TTGGTTTGTGCCAGCAGCT 60.758 52.632 0.00 0.00 44.23 4.24
1741 2607 5.368256 AGTCTTGCTTGTTGCTTAATCTG 57.632 39.130 0.00 0.00 43.37 2.90
1875 2742 1.826096 TGGGTATCACGGAAATCACGA 59.174 47.619 0.00 0.00 34.93 4.35
1878 2745 3.063045 GGGTATCACGGAAATCACGAAAC 59.937 47.826 0.00 0.00 34.93 2.78
1886 2755 3.302555 GGAAATCACGAAACGGGAAAAC 58.697 45.455 0.00 0.00 44.35 2.43
1976 2846 1.868713 TTCTACCCCTATTGTCGGCA 58.131 50.000 0.00 0.00 0.00 5.69
2012 3109 7.923344 ACTAGAGCATGCTTAATAATATAGCCG 59.077 37.037 23.61 4.11 34.03 5.52
2015 3112 4.261197 GCATGCTTAATAATATAGCCGGCC 60.261 45.833 26.15 5.07 34.03 6.13
2032 3129 0.739112 GCCGCTGGCTATAGCATCTC 60.739 60.000 25.53 9.23 46.69 2.75
2033 3130 0.605083 CCGCTGGCTATAGCATCTCA 59.395 55.000 25.53 13.24 43.87 3.27
2037 3134 2.027377 GCTGGCTATAGCATCTCACCAT 60.027 50.000 25.53 0.00 43.17 3.55
2050 3147 5.337410 GCATCTCACCATGTCATCTATAGCT 60.337 44.000 0.00 0.00 0.00 3.32
2054 3151 7.834803 TCTCACCATGTCATCTATAGCTAATG 58.165 38.462 0.00 0.00 0.00 1.90
2056 3153 7.606349 TCACCATGTCATCTATAGCTAATGTC 58.394 38.462 0.00 0.00 0.00 3.06
2071 3168 4.750098 GCTAATGTCATAGCCAACACGTAT 59.250 41.667 0.00 0.00 41.98 3.06
2073 3170 6.089551 GCTAATGTCATAGCCAACACGTATAG 59.910 42.308 0.00 0.00 41.98 1.31
2081 3178 4.929781 AGCCAACACGTATAGTAGTTAGC 58.070 43.478 0.00 0.00 33.03 3.09
2127 3232 3.561310 ACATATGTCCATTGTCACATCGC 59.439 43.478 1.41 0.00 34.92 4.58
2128 3233 2.408271 ATGTCCATTGTCACATCGCT 57.592 45.000 0.00 0.00 0.00 4.93
2130 3235 2.503331 TGTCCATTGTCACATCGCTTT 58.497 42.857 0.00 0.00 0.00 3.51
2137 3242 2.571212 TGTCACATCGCTTTTTGGAGT 58.429 42.857 0.00 0.00 0.00 3.85
2138 3243 2.548057 TGTCACATCGCTTTTTGGAGTC 59.452 45.455 0.00 0.00 0.00 3.36
2177 3516 1.195115 AATCTACAGCCCGCTTCTCA 58.805 50.000 0.00 0.00 0.00 3.27
2178 3517 1.418334 ATCTACAGCCCGCTTCTCAT 58.582 50.000 0.00 0.00 0.00 2.90
2181 3520 1.957177 CTACAGCCCGCTTCTCATCTA 59.043 52.381 0.00 0.00 0.00 1.98
2184 3523 1.617850 CAGCCCGCTTCTCATCTATCT 59.382 52.381 0.00 0.00 0.00 1.98
2185 3524 1.892474 AGCCCGCTTCTCATCTATCTC 59.108 52.381 0.00 0.00 0.00 2.75
2186 3525 1.892474 GCCCGCTTCTCATCTATCTCT 59.108 52.381 0.00 0.00 0.00 3.10
2188 3527 3.613910 GCCCGCTTCTCATCTATCTCTTC 60.614 52.174 0.00 0.00 0.00 2.87
2206 3545 5.710099 TCTCTTCTTCTCTCTCTTCCAACTC 59.290 44.000 0.00 0.00 0.00 3.01
2212 3551 3.837146 TCTCTCTCTTCCAACTCAGCAAT 59.163 43.478 0.00 0.00 0.00 3.56
2266 3605 9.706691 GCTTACATCACCTTATTATACTTGCTA 57.293 33.333 0.00 0.00 0.00 3.49
2270 3609 9.547753 ACATCACCTTATTATACTTGCTAACTG 57.452 33.333 0.00 0.00 0.00 3.16
2272 3611 9.988815 ATCACCTTATTATACTTGCTAACTGAG 57.011 33.333 0.00 0.00 0.00 3.35
2315 3678 9.216117 GGAGTTGACTTAAGCTTTAAATGTCTA 57.784 33.333 3.20 0.00 0.00 2.59
2442 3814 3.758554 TGAAAGCACTCCAAAAGATAGGC 59.241 43.478 0.00 0.00 0.00 3.93
2443 3815 3.439857 AAGCACTCCAAAAGATAGGCA 57.560 42.857 0.00 0.00 0.00 4.75
2444 3816 3.659183 AGCACTCCAAAAGATAGGCAT 57.341 42.857 0.00 0.00 0.00 4.40
2445 3817 3.973425 AGCACTCCAAAAGATAGGCATT 58.027 40.909 0.00 0.00 0.00 3.56
2447 3819 5.699143 AGCACTCCAAAAGATAGGCATTAT 58.301 37.500 0.00 0.00 0.00 1.28
2450 3822 5.242393 CACTCCAAAAGATAGGCATTATGGG 59.758 44.000 0.00 0.00 0.00 4.00
2451 3823 5.134339 ACTCCAAAAGATAGGCATTATGGGA 59.866 40.000 0.00 0.00 0.00 4.37
2452 3824 6.183361 ACTCCAAAAGATAGGCATTATGGGAT 60.183 38.462 0.00 0.00 0.00 3.85
2453 3825 6.248433 TCCAAAAGATAGGCATTATGGGATC 58.752 40.000 0.00 0.00 0.00 3.36
2454 3826 6.012113 CCAAAAGATAGGCATTATGGGATCA 58.988 40.000 0.00 0.00 0.00 2.92
2455 3827 6.494491 CCAAAAGATAGGCATTATGGGATCAA 59.506 38.462 0.00 0.00 0.00 2.57
2456 3828 7.015487 CCAAAAGATAGGCATTATGGGATCAAA 59.985 37.037 0.00 0.00 0.00 2.69
2457 3829 7.771927 AAAGATAGGCATTATGGGATCAAAG 57.228 36.000 0.00 0.00 0.00 2.77
2458 3830 5.824421 AGATAGGCATTATGGGATCAAAGG 58.176 41.667 0.00 0.00 0.00 3.11
2459 3831 3.979501 AGGCATTATGGGATCAAAGGT 57.020 42.857 0.00 0.00 0.00 3.50
2568 3941 1.351153 GAGTTGCCTAGCGAGTGAAC 58.649 55.000 0.00 0.00 0.00 3.18
2573 3946 3.165058 TGCCTAGCGAGTGAACTAATG 57.835 47.619 0.00 0.00 0.00 1.90
2631 4005 4.348863 TGCCAACAACCATGCTTATTTT 57.651 36.364 0.00 0.00 0.00 1.82
2704 4097 1.197036 CTACAGTCGTCGCTTCTGACA 59.803 52.381 15.03 5.49 38.84 3.58
2739 4132 3.676049 CGGACAAGGAGACGATTCATGAA 60.676 47.826 11.26 11.26 0.00 2.57
2756 4149 4.102681 TCATGAATCAGGTGAGCAGATCAT 59.897 41.667 0.00 0.00 40.92 2.45
2757 4150 4.069300 TGAATCAGGTGAGCAGATCATC 57.931 45.455 0.00 0.00 40.92 2.92
2761 4154 3.646534 TCAGGTGAGCAGATCATCCTTA 58.353 45.455 6.98 0.00 40.20 2.69
2762 4155 3.386078 TCAGGTGAGCAGATCATCCTTAC 59.614 47.826 6.98 0.00 40.20 2.34
2766 4159 4.261994 GGTGAGCAGATCATCCTTACTCTC 60.262 50.000 0.00 0.00 40.92 3.20
2767 4160 4.340666 GTGAGCAGATCATCCTTACTCTCA 59.659 45.833 0.00 0.00 40.92 3.27
2768 4161 5.010922 GTGAGCAGATCATCCTTACTCTCAT 59.989 44.000 0.00 0.00 40.92 2.90
2769 4162 5.601729 TGAGCAGATCATCCTTACTCTCATT 59.398 40.000 0.00 0.00 31.12 2.57
2770 4163 5.856156 AGCAGATCATCCTTACTCTCATTG 58.144 41.667 0.00 0.00 0.00 2.82
2771 4164 5.366186 AGCAGATCATCCTTACTCTCATTGT 59.634 40.000 0.00 0.00 0.00 2.71
2772 4165 6.054295 GCAGATCATCCTTACTCTCATTGTT 58.946 40.000 0.00 0.00 0.00 2.83
2773 4166 6.202570 GCAGATCATCCTTACTCTCATTGTTC 59.797 42.308 0.00 0.00 0.00 3.18
2774 4167 7.499292 CAGATCATCCTTACTCTCATTGTTCT 58.501 38.462 0.00 0.00 0.00 3.01
2775 4168 7.986320 CAGATCATCCTTACTCTCATTGTTCTT 59.014 37.037 0.00 0.00 0.00 2.52
2776 4169 8.547173 AGATCATCCTTACTCTCATTGTTCTTT 58.453 33.333 0.00 0.00 0.00 2.52
2777 4170 9.823647 GATCATCCTTACTCTCATTGTTCTTTA 57.176 33.333 0.00 0.00 0.00 1.85
2782 4175 9.712305 TCCTTACTCTCATTGTTCTTTAAAGAG 57.288 33.333 17.05 6.55 36.22 2.85
2783 4176 9.495572 CCTTACTCTCATTGTTCTTTAAAGAGT 57.504 33.333 17.05 11.02 43.15 3.24
2785 4178 9.832445 TTACTCTCATTGTTCTTTAAAGAGTGT 57.168 29.630 17.05 12.59 41.38 3.55
2787 4180 9.262358 ACTCTCATTGTTCTTTAAAGAGTGTAC 57.738 33.333 17.05 13.07 40.20 2.90
2788 4181 9.482627 CTCTCATTGTTCTTTAAAGAGTGTACT 57.517 33.333 17.05 0.68 36.22 2.73
2789 4182 9.832445 TCTCATTGTTCTTTAAAGAGTGTACTT 57.168 29.630 17.05 3.76 36.22 2.24
2791 4184 9.052759 TCATTGTTCTTTAAAGAGTGTACTTCC 57.947 33.333 17.05 1.11 36.22 3.46
2792 4185 8.836413 CATTGTTCTTTAAAGAGTGTACTTCCA 58.164 33.333 17.05 0.00 36.22 3.53
2793 4186 8.795842 TTGTTCTTTAAAGAGTGTACTTCCAA 57.204 30.769 17.05 8.05 36.22 3.53
2794 4187 8.205131 TGTTCTTTAAAGAGTGTACTTCCAAC 57.795 34.615 17.05 9.10 36.22 3.77
2795 4188 8.044908 TGTTCTTTAAAGAGTGTACTTCCAACT 58.955 33.333 17.05 0.00 36.22 3.16
2796 4189 8.890718 GTTCTTTAAAGAGTGTACTTCCAACTT 58.109 33.333 17.05 0.00 36.22 2.66
2797 4190 9.457436 TTCTTTAAAGAGTGTACTTCCAACTTT 57.543 29.630 17.05 0.00 36.22 2.66
2798 4191 8.889717 TCTTTAAAGAGTGTACTTCCAACTTTG 58.110 33.333 13.99 0.00 31.02 2.77
2799 4192 8.570068 TTTAAAGAGTGTACTTCCAACTTTGT 57.430 30.769 0.00 0.00 31.02 2.83
2800 4193 8.570068 TTAAAGAGTGTACTTCCAACTTTGTT 57.430 30.769 0.00 0.00 31.02 2.83
2801 4194 6.436843 AAGAGTGTACTTCCAACTTTGTTG 57.563 37.500 3.69 3.69 0.00 3.33
2802 4195 4.881850 AGAGTGTACTTCCAACTTTGTTGG 59.118 41.667 19.97 19.97 40.87 3.77
2803 4196 4.850680 AGTGTACTTCCAACTTTGTTGGA 58.149 39.130 23.38 23.38 46.08 3.53
2808 4201 2.358322 TCCAACTTTGTTGGAGGGTC 57.642 50.000 23.38 0.00 43.17 4.46
2809 4202 1.566703 TCCAACTTTGTTGGAGGGTCA 59.433 47.619 23.38 5.39 43.17 4.02
2810 4203 2.024846 TCCAACTTTGTTGGAGGGTCAA 60.025 45.455 23.38 4.76 43.17 3.18
2811 4204 2.763448 CCAACTTTGTTGGAGGGTCAAA 59.237 45.455 21.06 0.00 42.06 2.69
2812 4205 3.430236 CCAACTTTGTTGGAGGGTCAAAC 60.430 47.826 21.06 0.00 42.06 2.93
2813 4206 3.382083 ACTTTGTTGGAGGGTCAAACT 57.618 42.857 0.00 0.00 0.00 2.66
2814 4207 4.513406 ACTTTGTTGGAGGGTCAAACTA 57.487 40.909 0.00 0.00 0.00 2.24
2815 4208 5.061721 ACTTTGTTGGAGGGTCAAACTAT 57.938 39.130 0.00 0.00 0.00 2.12
2816 4209 5.070685 ACTTTGTTGGAGGGTCAAACTATC 58.929 41.667 0.00 0.00 0.00 2.08
2817 4210 3.713826 TGTTGGAGGGTCAAACTATCC 57.286 47.619 0.00 0.00 0.00 2.59
2818 4211 2.307686 TGTTGGAGGGTCAAACTATCCC 59.692 50.000 0.00 0.00 41.36 3.85
2819 4212 2.307686 GTTGGAGGGTCAAACTATCCCA 59.692 50.000 0.00 0.00 43.31 4.37
2820 4213 2.638325 TGGAGGGTCAAACTATCCCAA 58.362 47.619 0.00 0.00 43.31 4.12
2821 4214 2.990284 TGGAGGGTCAAACTATCCCAAA 59.010 45.455 0.00 0.00 43.31 3.28
2822 4215 3.010138 TGGAGGGTCAAACTATCCCAAAG 59.990 47.826 0.00 0.00 43.31 2.77
2823 4216 3.010250 GGAGGGTCAAACTATCCCAAAGT 59.990 47.826 0.00 0.00 43.31 2.66
2824 4217 4.508584 GGAGGGTCAAACTATCCCAAAGTT 60.509 45.833 0.00 0.00 43.31 2.66
2825 4218 5.074746 AGGGTCAAACTATCCCAAAGTTT 57.925 39.130 0.00 0.00 45.64 2.66
2831 4224 4.360951 AACTATCCCAAAGTTTGACCGA 57.639 40.909 17.33 9.38 33.39 4.69
2832 4225 3.939066 ACTATCCCAAAGTTTGACCGAG 58.061 45.455 17.33 10.67 0.00 4.63
2833 4226 2.951229 ATCCCAAAGTTTGACCGAGT 57.049 45.000 17.33 0.00 0.00 4.18
2834 4227 2.721425 TCCCAAAGTTTGACCGAGTT 57.279 45.000 17.33 0.00 0.00 3.01
2835 4228 3.007473 TCCCAAAGTTTGACCGAGTTT 57.993 42.857 17.33 0.00 0.00 2.66
2836 4229 2.685897 TCCCAAAGTTTGACCGAGTTTG 59.314 45.455 17.33 0.00 37.24 2.93
2837 4230 2.685897 CCCAAAGTTTGACCGAGTTTGA 59.314 45.455 17.33 0.00 38.91 2.69
2838 4231 3.243068 CCCAAAGTTTGACCGAGTTTGAG 60.243 47.826 17.33 0.00 38.91 3.02
2839 4232 3.363178 CAAAGTTTGACCGAGTTTGAGC 58.637 45.455 10.19 0.00 38.91 4.26
2840 4233 2.325583 AGTTTGACCGAGTTTGAGCA 57.674 45.000 0.00 0.00 0.00 4.26
2841 4234 2.639065 AGTTTGACCGAGTTTGAGCAA 58.361 42.857 0.00 0.00 0.00 3.91
2842 4235 3.013921 AGTTTGACCGAGTTTGAGCAAA 58.986 40.909 0.00 0.00 0.00 3.68
2843 4236 3.442273 AGTTTGACCGAGTTTGAGCAAAA 59.558 39.130 0.00 0.00 31.33 2.44
2844 4237 4.082463 AGTTTGACCGAGTTTGAGCAAAAA 60.082 37.500 0.00 0.00 31.33 1.94
2845 4238 4.647424 TTGACCGAGTTTGAGCAAAAAT 57.353 36.364 0.00 0.00 31.33 1.82
2846 4239 5.759506 TTGACCGAGTTTGAGCAAAAATA 57.240 34.783 0.00 0.00 31.33 1.40
2847 4240 5.957842 TGACCGAGTTTGAGCAAAAATAT 57.042 34.783 0.00 0.00 31.33 1.28
2848 4241 7.441890 TTGACCGAGTTTGAGCAAAAATATA 57.558 32.000 0.00 0.00 31.33 0.86
2849 4242 7.624360 TGACCGAGTTTGAGCAAAAATATAT 57.376 32.000 0.00 0.00 31.33 0.86
2850 4243 7.693952 TGACCGAGTTTGAGCAAAAATATATC 58.306 34.615 0.00 0.00 31.33 1.63
2851 4244 7.335673 TGACCGAGTTTGAGCAAAAATATATCA 59.664 33.333 0.00 0.00 31.33 2.15
2852 4245 8.050778 ACCGAGTTTGAGCAAAAATATATCAA 57.949 30.769 0.00 0.00 31.33 2.57
2853 4246 8.686334 ACCGAGTTTGAGCAAAAATATATCAAT 58.314 29.630 0.00 0.00 30.56 2.57
2872 4265 9.835389 ATATCAATATTTGTGAAACCAAATGGG 57.165 29.630 4.17 0.00 43.14 4.00
2994 4387 7.832503 AAGTTTGACTTTTCAATGGAGTTTG 57.167 32.000 0.00 0.00 41.50 2.93
2995 4388 7.169158 AGTTTGACTTTTCAATGGAGTTTGA 57.831 32.000 0.00 0.00 41.50 2.69
2996 4389 7.610865 AGTTTGACTTTTCAATGGAGTTTGAA 58.389 30.769 0.00 0.00 41.50 2.69
2997 4390 7.761249 AGTTTGACTTTTCAATGGAGTTTGAAG 59.239 33.333 0.58 0.00 44.12 3.02
2998 4391 6.773976 TGACTTTTCAATGGAGTTTGAAGT 57.226 33.333 0.58 0.00 44.12 3.01
2999 4392 7.873719 TGACTTTTCAATGGAGTTTGAAGTA 57.126 32.000 0.58 0.00 44.12 2.24
3000 4393 7.703328 TGACTTTTCAATGGAGTTTGAAGTAC 58.297 34.615 0.58 0.00 44.12 2.73
3001 4394 7.338196 TGACTTTTCAATGGAGTTTGAAGTACA 59.662 33.333 0.00 0.00 44.12 2.90
3002 4395 7.480810 ACTTTTCAATGGAGTTTGAAGTACAC 58.519 34.615 0.00 0.00 44.12 2.90
3003 4396 7.339466 ACTTTTCAATGGAGTTTGAAGTACACT 59.661 33.333 0.00 0.00 44.12 3.55
3004 4397 6.861065 TTCAATGGAGTTTGAAGTACACTC 57.139 37.500 0.00 0.00 39.91 3.51
3005 4398 6.174720 TCAATGGAGTTTGAAGTACACTCT 57.825 37.500 9.42 0.00 32.82 3.24
3006 4399 6.591935 TCAATGGAGTTTGAAGTACACTCTT 58.408 36.000 9.42 0.00 32.82 2.85
3007 4400 7.054124 TCAATGGAGTTTGAAGTACACTCTTT 58.946 34.615 9.42 3.15 32.82 2.52
3008 4401 7.226720 TCAATGGAGTTTGAAGTACACTCTTTC 59.773 37.037 9.42 0.00 32.82 2.62
3009 4402 5.984725 TGGAGTTTGAAGTACACTCTTTCA 58.015 37.500 9.42 1.20 0.00 2.69
3010 4403 6.411376 TGGAGTTTGAAGTACACTCTTTCAA 58.589 36.000 9.42 6.67 0.00 2.69
3011 4404 6.882140 TGGAGTTTGAAGTACACTCTTTCAAA 59.118 34.615 13.14 13.14 0.00 2.69
3012 4405 7.065803 TGGAGTTTGAAGTACACTCTTTCAAAG 59.934 37.037 16.08 0.00 31.87 2.77
3013 4406 7.280205 GGAGTTTGAAGTACACTCTTTCAAAGA 59.720 37.037 16.08 0.00 31.87 2.52
3014 4407 7.975750 AGTTTGAAGTACACTCTTTCAAAGAC 58.024 34.615 16.08 9.39 31.87 3.01
3015 4408 6.583912 TTGAAGTACACTCTTTCAAAGACG 57.416 37.500 0.00 0.00 33.12 4.18
3016 4409 5.047847 TGAAGTACACTCTTTCAAAGACGG 58.952 41.667 0.00 0.00 33.12 4.79
3017 4410 4.931661 AGTACACTCTTTCAAAGACGGA 57.068 40.909 0.00 0.00 33.12 4.69
3018 4411 4.872664 AGTACACTCTTTCAAAGACGGAG 58.127 43.478 0.00 0.00 33.12 4.63
3019 4412 4.583489 AGTACACTCTTTCAAAGACGGAGA 59.417 41.667 0.00 0.00 33.12 3.71
3020 4413 3.983741 ACACTCTTTCAAAGACGGAGAG 58.016 45.455 0.00 0.00 39.69 3.20
3021 4414 3.637229 ACACTCTTTCAAAGACGGAGAGA 59.363 43.478 0.00 0.00 37.77 3.10
3040 4436 8.834465 CGGAGAGAGTATTGATCAAATTTGAAT 58.166 33.333 23.91 15.40 41.13 2.57
3073 4474 7.833682 TGCTAGTTTGAATATCCAAGGAAATCA 59.166 33.333 0.00 0.00 0.00 2.57
3102 4504 7.804843 AATGGAAAATCATTTGTTTTGAGCA 57.195 28.000 0.00 0.00 34.01 4.26
3168 4608 7.248437 GTGCTAATTACTGGGTTGACATAAAC 58.752 38.462 0.00 0.00 0.00 2.01
3179 4626 7.332557 TGGGTTGACATAAACGTAACATAGAT 58.667 34.615 0.00 0.00 0.00 1.98
3205 4652 7.755373 TGTAAAATTCTGACAGATCTGAGTACG 59.245 37.037 29.27 11.81 34.62 3.67
3231 4678 3.679980 CCACGACTTGAGTGTCAATTAGG 59.320 47.826 0.00 0.00 35.59 2.69
3232 4679 4.307432 CACGACTTGAGTGTCAATTAGGT 58.693 43.478 0.00 0.00 35.59 3.08
3233 4680 5.466819 CACGACTTGAGTGTCAATTAGGTA 58.533 41.667 0.00 0.00 35.59 3.08
3236 4683 6.157211 CGACTTGAGTGTCAATTAGGTAACT 58.843 40.000 0.00 0.00 42.99 2.24
3237 4684 6.089551 CGACTTGAGTGTCAATTAGGTAACTG 59.910 42.308 0.00 0.00 41.28 3.16
3238 4685 7.062749 ACTTGAGTGTCAATTAGGTAACTGA 57.937 36.000 0.00 0.00 41.28 3.41
3240 4687 7.819900 ACTTGAGTGTCAATTAGGTAACTGATC 59.180 37.037 0.00 0.00 43.08 2.92
3241 4688 7.907389 TTGAGTGTCAATTAGGTAACTGATCT 58.093 34.615 0.00 0.00 43.08 2.75
3242 4689 9.031537 TTGAGTGTCAATTAGGTAACTGATCTA 57.968 33.333 0.00 0.00 43.08 1.98
3304 4753 6.507023 CCCCATGCTCATAAAAGACAAATAC 58.493 40.000 0.00 0.00 0.00 1.89
3425 4875 7.306632 GGCAAATAATACACATACTCACTCGTC 60.307 40.741 0.00 0.00 0.00 4.20
3459 4961 7.669722 AGTCTGATGCAAAGGGAAAAATACTAA 59.330 33.333 0.00 0.00 0.00 2.24
3489 4994 8.580720 TGTGGTAAAATGCATACAATAACAACT 58.419 29.630 0.00 0.00 0.00 3.16
3497 5164 9.709495 AATGCATACAATAACAACTTGACAAAT 57.291 25.926 0.00 0.00 0.00 2.32
3572 5241 9.950496 GAGAGAAAATATATTGATTAGCCAGGA 57.050 33.333 0.00 0.00 0.00 3.86
3734 5447 5.722441 AGCCTAGAACCTAGAGCTAACTTTT 59.278 40.000 12.19 0.00 0.00 2.27
3753 5466 2.467566 TTTTTGCGGGGTCTAGACTC 57.532 50.000 21.88 18.62 0.00 3.36
3754 5467 1.640917 TTTTGCGGGGTCTAGACTCT 58.359 50.000 21.97 0.00 30.95 3.24
3755 5468 2.519771 TTTGCGGGGTCTAGACTCTA 57.480 50.000 21.97 6.75 30.95 2.43
3756 5469 2.054232 TTGCGGGGTCTAGACTCTAG 57.946 55.000 21.97 16.63 30.95 2.43
3757 5470 1.210538 TGCGGGGTCTAGACTCTAGA 58.789 55.000 21.97 11.23 30.95 2.43
3758 5471 1.141254 TGCGGGGTCTAGACTCTAGAG 59.859 57.143 21.97 18.49 30.95 2.43
3759 5472 1.886886 CGGGGTCTAGACTCTAGAGC 58.113 60.000 27.10 27.10 40.30 4.09
3760 5473 1.418637 CGGGGTCTAGACTCTAGAGCT 59.581 57.143 30.79 18.31 40.69 4.09
3761 5474 2.633967 CGGGGTCTAGACTCTAGAGCTA 59.366 54.545 30.79 18.44 40.69 3.32
3762 5475 3.071312 CGGGGTCTAGACTCTAGAGCTAA 59.929 52.174 30.79 4.13 40.69 3.09
3763 5476 4.392047 GGGGTCTAGACTCTAGAGCTAAC 58.608 52.174 30.79 21.96 40.69 2.34
3764 5477 4.103627 GGGGTCTAGACTCTAGAGCTAACT 59.896 50.000 30.79 15.05 40.69 2.24
3765 5478 5.398239 GGGGTCTAGACTCTAGAGCTAACTT 60.398 48.000 30.79 0.00 40.69 2.66
3766 5479 6.124340 GGGTCTAGACTCTAGAGCTAACTTT 58.876 44.000 30.79 0.00 40.69 2.66
3767 5480 7.281841 GGGTCTAGACTCTAGAGCTAACTTTA 58.718 42.308 30.79 0.00 40.69 1.85
3768 5481 7.940688 GGGTCTAGACTCTAGAGCTAACTTTAT 59.059 40.741 30.79 0.00 40.69 1.40
3769 5482 9.346005 GGTCTAGACTCTAGAGCTAACTTTATT 57.654 37.037 27.48 0.00 38.59 1.40
3964 6136 2.879233 GCCTTGTCGGTGTCCCTCA 61.879 63.158 0.00 0.00 34.25 3.86
4002 6183 2.335011 CGCCGCGAGTGGATGATA 59.665 61.111 8.23 0.00 0.00 2.15
4116 6297 4.344865 ATGCCGGCCGTCCTGTTT 62.345 61.111 26.77 0.00 0.00 2.83
4167 6348 3.181479 GGCATGACTACACCGACATTCTA 60.181 47.826 0.00 0.00 0.00 2.10
4606 6796 1.888436 GACGGTGGTGATGGAGCTGA 61.888 60.000 0.00 0.00 0.00 4.26
4806 7008 0.469917 CGGACATGGGGCTCAAGTAT 59.530 55.000 0.00 0.00 0.00 2.12
5010 7212 2.345991 GACCACCTACGCCAGCAA 59.654 61.111 0.00 0.00 0.00 3.91
5128 7334 3.259374 AGGTTCACCATCACTAGACACTG 59.741 47.826 0.00 0.00 38.89 3.66
5131 7337 4.521130 TCACCATCACTAGACACTGTTC 57.479 45.455 0.00 0.00 0.00 3.18
5145 7353 6.100004 AGACACTGTTCCATGTACTAAATCG 58.900 40.000 0.00 0.00 0.00 3.34
5150 7358 7.704899 CACTGTTCCATGTACTAAATCGACATA 59.295 37.037 0.00 0.00 32.58 2.29
5166 7374 4.272748 TCGACATAGTAAGATCGGTGTCAG 59.727 45.833 0.00 0.00 36.63 3.51
5172 7380 2.202756 GATCGGTGTCAGGTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
5173 7381 3.718210 GATCGGTGTCAGGTCGGCC 62.718 68.421 0.00 0.00 0.00 6.13
5193 7401 2.167281 CCGAGGTCATCAGACACATCTT 59.833 50.000 0.00 0.00 46.80 2.40
5217 7425 3.066190 CACCACGGCCGGACTAGA 61.066 66.667 31.76 0.00 0.00 2.43
5248 7458 0.898789 ATGGACACTCGGACCGTCTT 60.899 55.000 14.79 0.00 0.00 3.01
5249 7459 1.080705 GGACACTCGGACCGTCTTG 60.081 63.158 14.79 11.66 0.00 3.02
5273 7483 5.805208 TCCTGATATGGTCTCTAGCCTAT 57.195 43.478 0.00 0.00 0.00 2.57
5274 7484 6.159172 TCCTGATATGGTCTCTAGCCTATT 57.841 41.667 0.00 0.00 0.00 1.73
5286 7496 6.042208 GTCTCTAGCCTATTGGGTTTGTCTAT 59.958 42.308 2.54 0.00 42.12 1.98
5290 7504 6.530019 AGCCTATTGGGTTTGTCTATTTTG 57.470 37.500 0.00 0.00 42.12 2.44
5351 7565 1.227943 ACACGTGTGGCATCTTGCT 60.228 52.632 22.71 0.00 44.28 3.91
5374 7588 1.274167 TCGTCCACACGCCTTCTTTAT 59.726 47.619 0.00 0.00 46.28 1.40
5393 7607 2.728690 TCACTCATTTTGCCACATGC 57.271 45.000 0.00 0.00 41.77 4.06
5523 7739 5.411977 TCGACGAGATCTTCAAAACTAGACT 59.588 40.000 0.00 0.00 0.00 3.24
5584 7806 6.942532 AGTTGTCATGATGTTTACACTGTT 57.057 33.333 0.00 0.00 0.00 3.16
5600 7822 2.554032 ACTGTTGTTGCCATAGTGCTTC 59.446 45.455 0.00 0.00 0.00 3.86
5758 7980 7.543868 TCAATGGCAATTTTAGTTTATGGTTCG 59.456 33.333 0.00 0.00 0.00 3.95
5774 7996 2.876550 GGTTCGTGGCAAGTCTAGTTTT 59.123 45.455 0.00 0.00 0.00 2.43
5902 8127 6.644592 GTGCAATAGACATGGCAACTTTTAAA 59.355 34.615 0.00 0.00 42.87 1.52
5905 8131 4.237349 AGACATGGCAACTTTTAAACCG 57.763 40.909 0.00 0.00 37.61 4.44
5957 8193 7.993821 TGAGATTTAGTTTCGATGATCTCAC 57.006 36.000 9.15 0.00 42.48 3.51
5958 8194 6.693113 TGAGATTTAGTTTCGATGATCTCACG 59.307 38.462 9.15 0.00 42.48 4.35
5959 8195 6.796426 AGATTTAGTTTCGATGATCTCACGA 58.204 36.000 0.00 0.00 0.00 4.35
5965 8201 0.300789 CGATGATCTCACGACGTCGA 59.699 55.000 41.52 21.79 42.98 4.20
5987 8223 7.497909 GTCGAGAGGGATTTAATGGTGAAAATA 59.502 37.037 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 168 4.238514 ACACGCTTGAGACAGTTCTTATC 58.761 43.478 0.00 0.00 29.47 1.75
160 169 4.258702 ACACGCTTGAGACAGTTCTTAT 57.741 40.909 0.00 0.00 29.47 1.73
161 170 3.728076 ACACGCTTGAGACAGTTCTTA 57.272 42.857 0.00 0.00 29.47 2.10
162 171 2.604046 ACACGCTTGAGACAGTTCTT 57.396 45.000 0.00 0.00 29.47 2.52
163 172 3.181479 TGTTACACGCTTGAGACAGTTCT 60.181 43.478 0.00 0.00 33.37 3.01
164 173 3.060473 GTGTTACACGCTTGAGACAGTTC 60.060 47.826 0.00 0.00 0.00 3.01
165 174 2.864343 GTGTTACACGCTTGAGACAGTT 59.136 45.455 0.00 0.00 0.00 3.16
166 175 2.159156 TGTGTTACACGCTTGAGACAGT 60.159 45.455 11.07 0.00 37.14 3.55
185 194 3.884895 TGTGAATCGGCATATTCCTTGT 58.115 40.909 7.55 0.00 35.40 3.16
186 195 4.758674 AGATGTGAATCGGCATATTCCTTG 59.241 41.667 7.55 0.00 35.40 3.61
187 196 4.978099 AGATGTGAATCGGCATATTCCTT 58.022 39.130 7.55 0.03 35.40 3.36
188 197 4.630644 AGATGTGAATCGGCATATTCCT 57.369 40.909 7.55 0.00 35.40 3.36
190 199 6.700020 CGATAAGATGTGAATCGGCATATTC 58.300 40.000 3.87 3.87 39.00 1.75
191 200 5.063944 GCGATAAGATGTGAATCGGCATATT 59.936 40.000 9.12 3.78 42.06 1.28
192 201 4.568359 GCGATAAGATGTGAATCGGCATAT 59.432 41.667 9.12 0.00 42.06 1.78
193 202 3.926527 GCGATAAGATGTGAATCGGCATA 59.073 43.478 9.12 0.00 42.06 3.14
194 203 2.738846 GCGATAAGATGTGAATCGGCAT 59.261 45.455 9.12 0.00 42.06 4.40
195 204 2.135139 GCGATAAGATGTGAATCGGCA 58.865 47.619 9.12 0.00 42.06 5.69
196 205 1.125021 CGCGATAAGATGTGAATCGGC 59.875 52.381 0.00 2.82 42.06 5.54
197 206 2.405357 GTCGCGATAAGATGTGAATCGG 59.595 50.000 14.06 1.98 42.06 4.18
198 207 2.087602 CGTCGCGATAAGATGTGAATCG 59.912 50.000 14.06 1.70 44.04 3.34
199 208 2.160091 GCGTCGCGATAAGATGTGAATC 60.160 50.000 14.06 0.00 0.00 2.52
200 209 1.787155 GCGTCGCGATAAGATGTGAAT 59.213 47.619 14.06 0.00 0.00 2.57
203 212 0.227234 GTGCGTCGCGATAAGATGTG 59.773 55.000 14.06 0.00 0.00 3.21
204 213 0.870307 GGTGCGTCGCGATAAGATGT 60.870 55.000 14.06 0.00 0.00 3.06
205 214 0.595053 AGGTGCGTCGCGATAAGATG 60.595 55.000 14.06 0.00 0.00 2.90
206 215 0.102481 AAGGTGCGTCGCGATAAGAT 59.898 50.000 14.06 0.00 0.00 2.40
208 217 1.714460 GATAAGGTGCGTCGCGATAAG 59.286 52.381 14.06 8.56 0.00 1.73
209 218 1.762419 GATAAGGTGCGTCGCGATAA 58.238 50.000 14.06 0.00 0.00 1.75
212 221 2.277692 CGATAAGGTGCGTCGCGA 60.278 61.111 13.38 3.71 0.00 5.87
214 223 1.944676 CCTCGATAAGGTGCGTCGC 60.945 63.158 11.10 11.10 40.67 5.19
215 224 0.311165 ATCCTCGATAAGGTGCGTCG 59.689 55.000 0.00 0.00 46.32 5.12
216 225 1.772182 CATCCTCGATAAGGTGCGTC 58.228 55.000 0.00 0.00 46.32 5.19
217 226 0.249489 GCATCCTCGATAAGGTGCGT 60.249 55.000 0.42 0.00 46.32 5.24
219 228 1.802960 CATGCATCCTCGATAAGGTGC 59.197 52.381 0.00 8.18 46.32 5.01
220 229 3.117491 ACATGCATCCTCGATAAGGTG 57.883 47.619 0.00 0.00 46.32 4.00
221 230 3.306364 GCTACATGCATCCTCGATAAGGT 60.306 47.826 0.00 0.00 43.07 3.50
222 231 3.056250 AGCTACATGCATCCTCGATAAGG 60.056 47.826 0.00 0.00 45.32 2.69
223 232 4.172505 GAGCTACATGCATCCTCGATAAG 58.827 47.826 0.00 0.00 45.94 1.73
224 233 3.573967 TGAGCTACATGCATCCTCGATAA 59.426 43.478 0.00 0.00 45.94 1.75
225 234 3.157087 TGAGCTACATGCATCCTCGATA 58.843 45.455 0.00 0.00 45.94 2.92
313 1112 2.097877 CGCGCACGTGTTAATCATCTAG 60.098 50.000 18.38 0.00 33.53 2.43
349 1149 1.331214 ACTTGTGCATTGTTCTGGGG 58.669 50.000 0.00 0.00 0.00 4.96
406 1206 7.681065 GCCAAGCAACTTTTGAGTTAACTAGAA 60.681 37.037 8.42 3.62 0.00 2.10
412 1212 4.727507 TGCCAAGCAACTTTTGAGTTAA 57.272 36.364 0.00 0.00 34.76 2.01
503 1303 2.456119 GCTCAGACGTGGATTGCCG 61.456 63.158 0.00 0.00 36.79 5.69
637 1437 1.977854 TGTCTTTTCTGCTGAGGGCTA 59.022 47.619 0.00 0.00 42.39 3.93
707 1508 6.183360 GGAAATTCGAGGAGCTCTAAGAAAAC 60.183 42.308 14.64 10.85 0.00 2.43
711 1512 4.023980 TGGAAATTCGAGGAGCTCTAAGA 58.976 43.478 14.64 7.53 0.00 2.10
712 1513 4.392921 TGGAAATTCGAGGAGCTCTAAG 57.607 45.455 14.64 5.14 0.00 2.18
713 1514 4.405680 TGATGGAAATTCGAGGAGCTCTAA 59.594 41.667 14.64 3.87 0.00 2.10
714 1515 3.960755 TGATGGAAATTCGAGGAGCTCTA 59.039 43.478 14.64 0.00 0.00 2.43
877 1684 1.060937 CCGAATGCACGTTGCTAGC 59.939 57.895 8.10 8.10 45.31 3.42
923 1731 0.602638 ACATTGTTTCTCGCCAGCGA 60.603 50.000 14.77 14.77 46.87 4.93
963 1774 3.054875 AGGGTTCGGACTGGGTTTTATAC 60.055 47.826 0.00 0.00 0.00 1.47
994 1806 5.009210 GGTAGTAGTGCTAATGAGTGAGGAG 59.991 48.000 0.00 0.00 0.00 3.69
1099 1919 3.512033 ATAGACGAGGAGCACAAAGAC 57.488 47.619 0.00 0.00 0.00 3.01
1155 1975 1.411246 ACGAATGCATCCTTACCGCTA 59.589 47.619 0.00 0.00 0.00 4.26
1174 1994 4.606457 AGATAAAGCAGACGCATGAAAC 57.394 40.909 0.00 0.00 42.27 2.78
1213 2033 7.900782 AACGCTAACAATCACAGTAATTAGT 57.099 32.000 0.00 0.00 0.00 2.24
1234 2054 4.145876 TCACAGGTACACTAACGTAACG 57.854 45.455 0.00 0.00 34.11 3.18
1273 2108 5.592104 TTTGCTAGTTCGATCCATACTGA 57.408 39.130 0.00 0.00 0.00 3.41
1313 2148 2.038557 AGGATCCTAACACACACACACC 59.961 50.000 14.27 0.00 0.00 4.16
1356 2211 5.137551 GTGGAAGGAGTAGAGAAGATAGCT 58.862 45.833 0.00 0.00 0.00 3.32
1366 2225 2.426431 TTTGGGGTGGAAGGAGTAGA 57.574 50.000 0.00 0.00 0.00 2.59
1367 2226 3.739401 AATTTGGGGTGGAAGGAGTAG 57.261 47.619 0.00 0.00 0.00 2.57
1368 2227 4.180723 AGTAATTTGGGGTGGAAGGAGTA 58.819 43.478 0.00 0.00 0.00 2.59
1389 2248 9.581289 TCCCTATCTAGAGAAATCTAAGACAAG 57.419 37.037 0.00 0.95 0.00 3.16
1412 2271 7.291411 ACATAGTACTTGTCTGATACATCCC 57.709 40.000 0.00 0.00 38.10 3.85
1490 2356 0.398318 ACCAGAGAGAAGTGTTGCCC 59.602 55.000 0.00 0.00 0.00 5.36
1507 2373 2.097466 ACTGCGTGCATATTAAGCAACC 59.903 45.455 0.00 0.00 44.64 3.77
1589 2455 7.182761 CAGGAGCTTTAATCTGTTGTATTTCG 58.817 38.462 0.00 0.00 0.00 3.46
1640 2506 9.231297 GGCACAAACCAACACAGATATATATAT 57.769 33.333 4.86 4.86 0.00 0.86
1641 2507 8.214364 TGGCACAAACCAACACAGATATATATA 58.786 33.333 0.00 0.00 36.55 0.86
1642 2508 7.059788 TGGCACAAACCAACACAGATATATAT 58.940 34.615 0.00 0.00 36.55 0.86
1655 2521 0.467106 TAGCTGCTGGCACAAACCAA 60.467 50.000 13.43 0.00 44.79 3.67
1658 2524 0.457337 GCATAGCTGCTGGCACAAAC 60.457 55.000 13.43 0.00 45.32 2.93
1693 2559 9.521841 TTGATCTTCAGTTTAGAGAGACTAGAA 57.478 33.333 0.00 0.00 32.30 2.10
1741 2607 1.215655 ACGTCAGAAGCGACAACTGC 61.216 55.000 0.00 0.00 35.54 4.40
1789 2655 2.035832 GCTAGCTCTCACCTGGATCTTC 59.964 54.545 7.70 0.00 0.00 2.87
1875 2742 7.494952 TCCATTTAATTTTTCGTTTTCCCGTTT 59.505 29.630 0.00 0.00 0.00 3.60
1878 2745 7.409465 TTCCATTTAATTTTTCGTTTTCCCG 57.591 32.000 0.00 0.00 0.00 5.14
1957 2827 1.760613 CTGCCGACAATAGGGGTAGAA 59.239 52.381 0.00 0.00 35.82 2.10
1961 2831 0.907704 TCACTGCCGACAATAGGGGT 60.908 55.000 0.00 0.00 0.00 4.95
2015 3112 1.671261 GGTGAGATGCTATAGCCAGCG 60.671 57.143 21.84 0.00 44.88 5.18
2026 3123 4.869297 GCTATAGATGACATGGTGAGATGC 59.131 45.833 3.21 0.00 0.00 3.91
2027 3124 6.283544 AGCTATAGATGACATGGTGAGATG 57.716 41.667 3.21 0.00 0.00 2.90
2032 3129 7.381323 TGACATTAGCTATAGATGACATGGTG 58.619 38.462 10.24 0.00 0.00 4.17
2033 3130 7.544804 TGACATTAGCTATAGATGACATGGT 57.455 36.000 10.24 0.00 0.00 3.55
2037 3134 7.397192 TGGCTATGACATTAGCTATAGATGACA 59.603 37.037 10.24 10.20 43.37 3.58
2050 3147 7.046292 ACTATACGTGTTGGCTATGACATTA 57.954 36.000 0.00 0.00 0.00 1.90
2054 3151 6.069684 ACTACTATACGTGTTGGCTATGAC 57.930 41.667 0.00 0.00 0.00 3.06
2056 3153 6.581542 GCTAACTACTATACGTGTTGGCTATG 59.418 42.308 13.03 0.00 41.47 2.23
2106 3203 3.811497 AGCGATGTGACAATGGACATATG 59.189 43.478 0.00 0.00 32.85 1.78
2108 3205 3.541996 AGCGATGTGACAATGGACATA 57.458 42.857 0.00 0.00 32.85 2.29
2112 3209 3.305267 CCAAAAAGCGATGTGACAATGGA 60.305 43.478 0.00 0.00 0.00 3.41
2115 3212 3.569701 ACTCCAAAAAGCGATGTGACAAT 59.430 39.130 0.00 0.00 0.00 2.71
2116 3213 2.948979 ACTCCAAAAAGCGATGTGACAA 59.051 40.909 0.00 0.00 0.00 3.18
2118 3223 2.095718 GGACTCCAAAAAGCGATGTGAC 60.096 50.000 0.00 0.00 0.00 3.67
2124 3229 1.503818 GCACGGACTCCAAAAAGCGA 61.504 55.000 0.00 0.00 0.00 4.93
2125 3230 1.082104 GCACGGACTCCAAAAAGCG 60.082 57.895 0.00 0.00 0.00 4.68
2127 3232 2.480419 CTGTAGCACGGACTCCAAAAAG 59.520 50.000 0.00 0.00 0.00 2.27
2128 3233 2.489971 CTGTAGCACGGACTCCAAAAA 58.510 47.619 0.00 0.00 0.00 1.94
2130 3235 0.320421 GCTGTAGCACGGACTCCAAA 60.320 55.000 0.00 0.00 41.59 3.28
2160 3265 0.747255 GATGAGAAGCGGGCTGTAGA 59.253 55.000 0.00 0.00 0.00 2.59
2161 3266 0.749649 AGATGAGAAGCGGGCTGTAG 59.250 55.000 0.00 0.00 0.00 2.74
2177 3516 7.815383 TGGAAGAGAGAGAAGAAGAGATAGAT 58.185 38.462 0.00 0.00 0.00 1.98
2178 3517 7.206789 TGGAAGAGAGAGAAGAAGAGATAGA 57.793 40.000 0.00 0.00 0.00 1.98
2181 3520 6.256053 AGTTGGAAGAGAGAGAAGAAGAGAT 58.744 40.000 0.00 0.00 0.00 2.75
2184 3523 5.389520 TGAGTTGGAAGAGAGAGAAGAAGA 58.610 41.667 0.00 0.00 0.00 2.87
2185 3524 5.713025 CTGAGTTGGAAGAGAGAGAAGAAG 58.287 45.833 0.00 0.00 0.00 2.85
2186 3525 4.021544 GCTGAGTTGGAAGAGAGAGAAGAA 60.022 45.833 0.00 0.00 0.00 2.52
2188 3527 3.257873 TGCTGAGTTGGAAGAGAGAGAAG 59.742 47.826 0.00 0.00 0.00 2.85
2236 3575 3.926058 AATAAGGTGATGTAAGCGGGT 57.074 42.857 0.00 0.00 0.00 5.28
2266 3605 6.012858 TCCCATAATTACTGTCCAACTCAGTT 60.013 38.462 3.98 0.00 42.50 3.16
2267 3606 5.487488 TCCCATAATTACTGTCCAACTCAGT 59.513 40.000 4.11 4.11 46.10 3.41
2268 3607 5.989477 TCCCATAATTACTGTCCAACTCAG 58.011 41.667 0.00 0.00 38.68 3.35
2269 3608 5.487488 ACTCCCATAATTACTGTCCAACTCA 59.513 40.000 0.00 0.00 0.00 3.41
2270 3609 5.990668 ACTCCCATAATTACTGTCCAACTC 58.009 41.667 0.00 0.00 0.00 3.01
2272 3611 6.093633 GTCAACTCCCATAATTACTGTCCAAC 59.906 42.308 0.00 0.00 0.00 3.77
2315 3678 4.460731 TCGTGATTCTCAGTCAGATCTGTT 59.539 41.667 21.92 9.39 36.85 3.16
2442 3814 4.525487 CCCATGACCTTTGATCCCATAATG 59.475 45.833 0.00 0.00 0.00 1.90
2443 3815 4.419875 TCCCATGACCTTTGATCCCATAAT 59.580 41.667 0.00 0.00 0.00 1.28
2444 3816 3.790976 TCCCATGACCTTTGATCCCATAA 59.209 43.478 0.00 0.00 0.00 1.90
2445 3817 3.402353 TCCCATGACCTTTGATCCCATA 58.598 45.455 0.00 0.00 0.00 2.74
2447 3819 1.679981 TCCCATGACCTTTGATCCCA 58.320 50.000 0.00 0.00 0.00 4.37
2450 3822 4.615912 CGTTGTTTCCCATGACCTTTGATC 60.616 45.833 0.00 0.00 0.00 2.92
2451 3823 3.255642 CGTTGTTTCCCATGACCTTTGAT 59.744 43.478 0.00 0.00 0.00 2.57
2452 3824 2.621055 CGTTGTTTCCCATGACCTTTGA 59.379 45.455 0.00 0.00 0.00 2.69
2453 3825 2.621055 TCGTTGTTTCCCATGACCTTTG 59.379 45.455 0.00 0.00 0.00 2.77
2454 3826 2.938838 TCGTTGTTTCCCATGACCTTT 58.061 42.857 0.00 0.00 0.00 3.11
2455 3827 2.621526 GTTCGTTGTTTCCCATGACCTT 59.378 45.455 0.00 0.00 0.00 3.50
2456 3828 2.227194 GTTCGTTGTTTCCCATGACCT 58.773 47.619 0.00 0.00 0.00 3.85
2457 3829 1.950909 TGTTCGTTGTTTCCCATGACC 59.049 47.619 0.00 0.00 0.00 4.02
2458 3830 2.616842 ACTGTTCGTTGTTTCCCATGAC 59.383 45.455 0.00 0.00 0.00 3.06
2459 3831 2.616376 CACTGTTCGTTGTTTCCCATGA 59.384 45.455 0.00 0.00 0.00 3.07
2561 3934 2.337583 TGCTCACGCATTAGTTCACTC 58.662 47.619 0.00 0.00 42.25 3.51
2573 3946 1.661112 GATTGGTAGAAGTGCTCACGC 59.339 52.381 0.00 0.00 36.20 5.34
2739 4132 2.692024 AGGATGATCTGCTCACCTGAT 58.308 47.619 0.00 0.00 36.48 2.90
2756 4149 9.712305 CTCTTTAAAGAACAATGAGAGTAAGGA 57.288 33.333 18.25 0.00 34.03 3.36
2757 4150 9.495572 ACTCTTTAAAGAACAATGAGAGTAAGG 57.504 33.333 18.25 4.30 40.20 2.69
2761 4154 9.262358 GTACACTCTTTAAAGAACAATGAGAGT 57.738 33.333 18.25 11.53 42.05 3.24
2762 4155 9.482627 AGTACACTCTTTAAAGAACAATGAGAG 57.517 33.333 18.25 6.45 34.03 3.20
2766 4159 8.836413 TGGAAGTACACTCTTTAAAGAACAATG 58.164 33.333 18.25 15.21 34.03 2.82
2767 4160 8.974060 TGGAAGTACACTCTTTAAAGAACAAT 57.026 30.769 18.25 7.38 34.03 2.71
2768 4161 8.671028 GTTGGAAGTACACTCTTTAAAGAACAA 58.329 33.333 18.25 9.47 34.03 2.83
2769 4162 8.044908 AGTTGGAAGTACACTCTTTAAAGAACA 58.955 33.333 18.25 2.16 34.03 3.18
2770 4163 8.434733 AGTTGGAAGTACACTCTTTAAAGAAC 57.565 34.615 18.25 13.23 34.03 3.01
2771 4164 9.457436 AAAGTTGGAAGTACACTCTTTAAAGAA 57.543 29.630 18.25 1.42 34.03 2.52
2772 4165 8.889717 CAAAGTTGGAAGTACACTCTTTAAAGA 58.110 33.333 16.85 16.85 0.00 2.52
2773 4166 8.674607 ACAAAGTTGGAAGTACACTCTTTAAAG 58.325 33.333 9.04 9.04 0.00 1.85
2774 4167 8.570068 ACAAAGTTGGAAGTACACTCTTTAAA 57.430 30.769 0.00 0.00 0.00 1.52
2775 4168 8.455682 CAACAAAGTTGGAAGTACACTCTTTAA 58.544 33.333 2.05 0.00 0.00 1.52
2776 4169 7.066525 CCAACAAAGTTGGAAGTACACTCTTTA 59.933 37.037 21.24 0.00 42.06 1.85
2777 4170 6.127730 CCAACAAAGTTGGAAGTACACTCTTT 60.128 38.462 21.24 0.00 42.06 2.52
2778 4171 5.357032 CCAACAAAGTTGGAAGTACACTCTT 59.643 40.000 21.24 0.00 42.06 2.85
2779 4172 4.881850 CCAACAAAGTTGGAAGTACACTCT 59.118 41.667 21.24 0.00 42.06 3.24
2780 4173 4.879545 TCCAACAAAGTTGGAAGTACACTC 59.120 41.667 24.83 0.00 44.90 3.51
2781 4174 4.850680 TCCAACAAAGTTGGAAGTACACT 58.149 39.130 24.83 0.00 44.90 3.55
2782 4175 4.036380 CCTCCAACAAAGTTGGAAGTACAC 59.964 45.833 26.25 0.00 46.85 2.90
2783 4176 4.204012 CCTCCAACAAAGTTGGAAGTACA 58.796 43.478 26.25 8.75 46.85 2.90
2784 4177 3.568430 CCCTCCAACAAAGTTGGAAGTAC 59.432 47.826 26.25 0.00 46.85 2.73
2785 4178 3.203487 ACCCTCCAACAAAGTTGGAAGTA 59.797 43.478 26.25 9.67 46.85 2.24
2786 4179 2.024369 ACCCTCCAACAAAGTTGGAAGT 60.024 45.455 26.25 22.95 46.85 3.01
2787 4180 2.623416 GACCCTCCAACAAAGTTGGAAG 59.377 50.000 26.25 21.51 46.85 3.46
2788 4181 2.024846 TGACCCTCCAACAAAGTTGGAA 60.025 45.455 26.25 12.88 46.85 3.53
2789 4182 1.566703 TGACCCTCCAACAAAGTTGGA 59.433 47.619 25.17 25.17 45.61 3.53
2790 4183 2.065899 TGACCCTCCAACAAAGTTGG 57.934 50.000 20.09 20.09 40.87 3.77
2791 4184 3.447229 AGTTTGACCCTCCAACAAAGTTG 59.553 43.478 3.00 3.00 34.79 3.16
2792 4185 3.708451 AGTTTGACCCTCCAACAAAGTT 58.292 40.909 0.00 0.00 34.79 2.66
2793 4186 3.382083 AGTTTGACCCTCCAACAAAGT 57.618 42.857 0.00 0.00 34.86 2.66
2794 4187 4.459337 GGATAGTTTGACCCTCCAACAAAG 59.541 45.833 0.00 0.00 34.86 2.77
2795 4188 4.403734 GGATAGTTTGACCCTCCAACAAA 58.596 43.478 0.00 0.00 0.00 2.83
2796 4189 3.245122 GGGATAGTTTGACCCTCCAACAA 60.245 47.826 0.00 0.00 40.39 2.83
2797 4190 2.307686 GGGATAGTTTGACCCTCCAACA 59.692 50.000 0.00 0.00 40.39 3.33
2798 4191 2.307686 TGGGATAGTTTGACCCTCCAAC 59.692 50.000 0.00 0.00 43.59 3.77
2799 4192 2.638325 TGGGATAGTTTGACCCTCCAA 58.362 47.619 0.00 0.00 43.59 3.53
2800 4193 2.352561 TGGGATAGTTTGACCCTCCA 57.647 50.000 0.00 0.00 43.59 3.86
2801 4194 3.010250 ACTTTGGGATAGTTTGACCCTCC 59.990 47.826 0.00 0.00 43.59 4.30
2802 4195 4.302559 ACTTTGGGATAGTTTGACCCTC 57.697 45.455 0.00 0.00 43.59 4.30
2803 4196 4.741928 AACTTTGGGATAGTTTGACCCT 57.258 40.909 0.00 0.00 43.59 4.34
2809 4202 4.721132 TCGGTCAAACTTTGGGATAGTTT 58.279 39.130 1.62 0.00 44.38 2.66
2810 4203 4.202430 ACTCGGTCAAACTTTGGGATAGTT 60.202 41.667 1.62 0.00 37.43 2.24
2811 4204 3.326880 ACTCGGTCAAACTTTGGGATAGT 59.673 43.478 1.62 0.00 0.00 2.12
2812 4205 3.939066 ACTCGGTCAAACTTTGGGATAG 58.061 45.455 1.62 0.00 0.00 2.08
2813 4206 4.360951 AACTCGGTCAAACTTTGGGATA 57.639 40.909 1.62 0.00 0.00 2.59
2814 4207 2.951229 ACTCGGTCAAACTTTGGGAT 57.049 45.000 1.62 0.00 0.00 3.85
2815 4208 2.685897 CAAACTCGGTCAAACTTTGGGA 59.314 45.455 1.62 0.00 0.00 4.37
2816 4209 2.685897 TCAAACTCGGTCAAACTTTGGG 59.314 45.455 1.62 0.00 0.00 4.12
2817 4210 3.792124 GCTCAAACTCGGTCAAACTTTGG 60.792 47.826 1.62 0.00 0.00 3.28
2818 4211 3.181501 TGCTCAAACTCGGTCAAACTTTG 60.182 43.478 0.00 0.00 0.00 2.77
2819 4212 3.013921 TGCTCAAACTCGGTCAAACTTT 58.986 40.909 0.00 0.00 0.00 2.66
2820 4213 2.639065 TGCTCAAACTCGGTCAAACTT 58.361 42.857 0.00 0.00 0.00 2.66
2821 4214 2.325583 TGCTCAAACTCGGTCAAACT 57.674 45.000 0.00 0.00 0.00 2.66
2822 4215 3.414549 TTTGCTCAAACTCGGTCAAAC 57.585 42.857 0.00 0.00 0.00 2.93
2823 4216 4.442375 TTTTTGCTCAAACTCGGTCAAA 57.558 36.364 0.00 0.00 0.00 2.69
2824 4217 4.647424 ATTTTTGCTCAAACTCGGTCAA 57.353 36.364 0.00 0.00 0.00 3.18
2825 4218 5.957842 ATATTTTTGCTCAAACTCGGTCA 57.042 34.783 0.00 0.00 0.00 4.02
2826 4219 7.693952 TGATATATTTTTGCTCAAACTCGGTC 58.306 34.615 0.00 0.00 0.00 4.79
2827 4220 7.624360 TGATATATTTTTGCTCAAACTCGGT 57.376 32.000 0.00 0.00 0.00 4.69
2846 4239 9.835389 CCCATTTGGTTTCACAAATATTGATAT 57.165 29.630 4.10 0.00 46.27 1.63
2970 4363 7.610865 TCAAACTCCATTGAAAAGTCAAACTT 58.389 30.769 0.00 0.00 46.66 2.66
2971 4364 7.169158 TCAAACTCCATTGAAAAGTCAAACT 57.831 32.000 0.00 0.00 46.66 2.66
2972 4365 7.545615 ACTTCAAACTCCATTGAAAAGTCAAAC 59.454 33.333 4.29 0.00 46.66 2.93
2973 4366 7.610865 ACTTCAAACTCCATTGAAAAGTCAAA 58.389 30.769 4.29 0.00 46.66 2.69
2974 4367 7.169158 ACTTCAAACTCCATTGAAAAGTCAA 57.831 32.000 4.29 0.00 45.75 3.18
2975 4368 6.773976 ACTTCAAACTCCATTGAAAAGTCA 57.226 33.333 4.29 0.00 45.75 3.41
2976 4369 7.644157 GTGTACTTCAAACTCCATTGAAAAGTC 59.356 37.037 4.29 0.00 45.75 3.01
2977 4370 7.339466 AGTGTACTTCAAACTCCATTGAAAAGT 59.661 33.333 4.29 2.76 45.75 2.66
2978 4371 7.707104 AGTGTACTTCAAACTCCATTGAAAAG 58.293 34.615 4.29 0.00 45.75 2.27
2979 4372 7.556275 AGAGTGTACTTCAAACTCCATTGAAAA 59.444 33.333 6.66 0.00 45.75 2.29
2980 4373 7.054124 AGAGTGTACTTCAAACTCCATTGAAA 58.946 34.615 6.66 0.00 45.75 2.69
2981 4374 6.591935 AGAGTGTACTTCAAACTCCATTGAA 58.408 36.000 6.66 2.85 44.68 2.69
2982 4375 6.174720 AGAGTGTACTTCAAACTCCATTGA 57.825 37.500 6.66 0.00 41.02 2.57
2983 4376 6.867662 AAGAGTGTACTTCAAACTCCATTG 57.132 37.500 6.66 0.00 41.02 2.82
2984 4377 7.054124 TGAAAGAGTGTACTTCAAACTCCATT 58.946 34.615 6.66 3.65 41.02 3.16
2985 4378 6.591935 TGAAAGAGTGTACTTCAAACTCCAT 58.408 36.000 6.66 0.00 41.02 3.41
2986 4379 5.984725 TGAAAGAGTGTACTTCAAACTCCA 58.015 37.500 6.66 0.00 41.02 3.86
2987 4380 6.920569 TTGAAAGAGTGTACTTCAAACTCC 57.079 37.500 6.66 0.00 41.02 3.85
2988 4381 8.117370 GTCTTTGAAAGAGTGTACTTCAAACTC 58.883 37.037 8.06 8.48 38.41 3.01
2989 4382 7.201530 CGTCTTTGAAAGAGTGTACTTCAAACT 60.202 37.037 8.06 0.02 38.41 2.66
2990 4383 6.900299 CGTCTTTGAAAGAGTGTACTTCAAAC 59.100 38.462 8.06 7.26 38.41 2.93
2991 4384 6.036735 CCGTCTTTGAAAGAGTGTACTTCAAA 59.963 38.462 8.06 15.24 38.41 2.69
2992 4385 5.522460 CCGTCTTTGAAAGAGTGTACTTCAA 59.478 40.000 8.06 3.77 38.41 2.69
2993 4386 5.047847 CCGTCTTTGAAAGAGTGTACTTCA 58.952 41.667 8.06 0.00 38.41 3.02
2994 4387 5.287226 TCCGTCTTTGAAAGAGTGTACTTC 58.713 41.667 8.06 0.00 38.41 3.01
2995 4388 5.068723 TCTCCGTCTTTGAAAGAGTGTACTT 59.931 40.000 8.06 0.00 38.41 2.24
2996 4389 4.583489 TCTCCGTCTTTGAAAGAGTGTACT 59.417 41.667 8.06 0.00 38.41 2.73
2997 4390 4.868067 TCTCCGTCTTTGAAAGAGTGTAC 58.132 43.478 8.06 0.00 38.41 2.90
2998 4391 4.825634 TCTCTCCGTCTTTGAAAGAGTGTA 59.174 41.667 8.06 0.00 38.41 2.90
2999 4392 3.637229 TCTCTCCGTCTTTGAAAGAGTGT 59.363 43.478 8.06 0.00 38.41 3.55
3000 4393 4.233789 CTCTCTCCGTCTTTGAAAGAGTG 58.766 47.826 8.06 4.11 38.41 3.51
3001 4394 3.892588 ACTCTCTCCGTCTTTGAAAGAGT 59.107 43.478 8.06 0.00 38.41 3.24
3002 4395 4.513198 ACTCTCTCCGTCTTTGAAAGAG 57.487 45.455 8.06 2.98 38.41 2.85
3003 4396 6.208797 TCAATACTCTCTCCGTCTTTGAAAGA 59.791 38.462 3.02 3.02 34.51 2.52
3004 4397 6.390721 TCAATACTCTCTCCGTCTTTGAAAG 58.609 40.000 0.00 0.00 0.00 2.62
3005 4398 6.340962 TCAATACTCTCTCCGTCTTTGAAA 57.659 37.500 0.00 0.00 0.00 2.69
3006 4399 5.977489 TCAATACTCTCTCCGTCTTTGAA 57.023 39.130 0.00 0.00 0.00 2.69
3007 4400 5.652452 TGATCAATACTCTCTCCGTCTTTGA 59.348 40.000 0.00 0.00 0.00 2.69
3008 4401 5.895928 TGATCAATACTCTCTCCGTCTTTG 58.104 41.667 0.00 0.00 0.00 2.77
3009 4402 6.531503 TTGATCAATACTCTCTCCGTCTTT 57.468 37.500 3.38 0.00 0.00 2.52
3010 4403 6.531503 TTTGATCAATACTCTCTCCGTCTT 57.468 37.500 9.40 0.00 0.00 3.01
3011 4404 6.723298 ATTTGATCAATACTCTCTCCGTCT 57.277 37.500 9.40 0.00 0.00 4.18
3012 4405 7.492669 TCAAATTTGATCAATACTCTCTCCGTC 59.507 37.037 16.91 0.00 31.01 4.79
3013 4406 7.331026 TCAAATTTGATCAATACTCTCTCCGT 58.669 34.615 16.91 0.00 31.01 4.69
3014 4407 7.776933 TCAAATTTGATCAATACTCTCTCCG 57.223 36.000 16.91 0.00 31.01 4.63
3043 4439 6.156949 TCCTTGGATATTCAAACTAGCAGAGT 59.843 38.462 0.00 0.00 41.56 3.24
3079 4480 7.989416 ATGCTCAAAACAAATGATTTTCCAT 57.011 28.000 0.00 0.00 0.00 3.41
3102 4504 2.082836 ATCTCTCCGGTCGGCCCTAT 62.083 60.000 0.00 0.00 34.68 2.57
3132 4554 5.218885 CAGTAATTAGCACCAGATCTCGAG 58.781 45.833 5.93 5.93 0.00 4.04
3135 4575 4.101741 ACCCAGTAATTAGCACCAGATCTC 59.898 45.833 0.00 0.00 0.00 2.75
3146 4586 7.605410 ACGTTTATGTCAACCCAGTAATTAG 57.395 36.000 0.00 0.00 0.00 1.73
3179 4626 7.755373 CGTACTCAGATCTGTCAGAATTTTACA 59.245 37.037 21.92 0.00 0.00 2.41
3186 4633 5.335740 GGTTTCGTACTCAGATCTGTCAGAA 60.336 44.000 21.92 16.74 0.00 3.02
3205 4652 2.546778 TGACACTCAAGTCGTGGTTTC 58.453 47.619 0.00 0.00 41.41 2.78
3242 4689 9.740710 GGGTTAAATCAATATTGGATAGCTAGT 57.259 33.333 15.36 0.00 0.00 2.57
3304 4753 3.961480 TGACCTAGATCCCATAATGCG 57.039 47.619 0.00 0.00 0.00 4.73
3425 4875 1.511850 TTGCATCAGACTTCACACCG 58.488 50.000 0.00 0.00 0.00 4.94
3459 4961 9.801873 GTTATTGTATGCATTTTACCACATTCT 57.198 29.630 3.54 0.00 0.00 2.40
3497 5164 9.142515 CACAACGTCTATTGGTAGTTTGTAATA 57.857 33.333 0.00 0.00 33.63 0.98
3509 5176 6.811665 TCATCTTCTAACACAACGTCTATTGG 59.188 38.462 0.00 0.00 33.63 3.16
3511 5178 8.827177 TTTCATCTTCTAACACAACGTCTATT 57.173 30.769 0.00 0.00 0.00 1.73
3636 5307 1.742411 GCACGGGCTAGCAATTCTACA 60.742 52.381 18.24 0.00 36.96 2.74
3734 5447 1.975680 AGAGTCTAGACCCCGCAAAAA 59.024 47.619 19.38 0.00 0.00 1.94
3737 5450 1.562942 TCTAGAGTCTAGACCCCGCAA 59.437 52.381 23.38 1.67 0.00 4.85
3738 5451 1.141254 CTCTAGAGTCTAGACCCCGCA 59.859 57.143 23.38 4.33 0.00 5.69
3739 5452 1.886886 CTCTAGAGTCTAGACCCCGC 58.113 60.000 23.38 6.87 0.00 6.13
3740 5453 1.418637 AGCTCTAGAGTCTAGACCCCG 59.581 57.143 23.38 15.56 0.00 5.73
3741 5454 4.103627 AGTTAGCTCTAGAGTCTAGACCCC 59.896 50.000 23.38 15.01 0.00 4.95
3742 5455 5.300411 AGTTAGCTCTAGAGTCTAGACCC 57.700 47.826 23.38 17.11 0.00 4.46
3743 5456 8.913487 ATAAAGTTAGCTCTAGAGTCTAGACC 57.087 38.462 23.38 17.85 0.00 3.85
3768 5481 8.610035 CGGCATAATCTCACGATACTATAGTAA 58.390 37.037 16.37 0.00 33.76 2.24
3769 5482 7.983484 TCGGCATAATCTCACGATACTATAGTA 59.017 37.037 14.87 14.87 34.67 1.82
3770 5483 6.822170 TCGGCATAATCTCACGATACTATAGT 59.178 38.462 10.87 10.87 0.00 2.12
3771 5484 7.247929 TCGGCATAATCTCACGATACTATAG 57.752 40.000 0.00 0.00 0.00 1.31
3772 5485 7.497909 TCATCGGCATAATCTCACGATACTATA 59.502 37.037 0.00 0.00 41.73 1.31
3773 5486 6.318900 TCATCGGCATAATCTCACGATACTAT 59.681 38.462 0.00 0.00 41.73 2.12
3780 5493 3.989817 TCATTCATCGGCATAATCTCACG 59.010 43.478 0.00 0.00 0.00 4.35
3964 6136 3.854669 CTTCCAGCTCGCCGGGAT 61.855 66.667 2.18 0.00 0.00 3.85
4002 6183 1.585521 CGCTTTCGAGTACGGCGAT 60.586 57.895 16.62 0.00 45.13 4.58
4213 6394 2.093075 ACTGGATGTTGCTGATCAGGAG 60.093 50.000 23.89 10.01 0.00 3.69
4470 6651 4.475135 GGCTCCCGGGTCAAGCTC 62.475 72.222 26.75 15.98 36.29 4.09
4728 6930 2.918802 TTCCCGTACGGCACCACT 60.919 61.111 29.15 0.00 0.00 4.00
4806 7008 0.179137 CGCTCACGCTGTAATCCAGA 60.179 55.000 0.00 0.00 44.49 3.86
4867 7069 3.467226 GGGGTCCTTGATCGCCGA 61.467 66.667 0.00 0.00 0.00 5.54
4911 7113 4.213482 GCGAGGTAGAACTCAAACATGTTT 59.787 41.667 18.13 18.13 37.34 2.83
5010 7212 2.877154 TTCTTCTCTCTGCCCCCTAT 57.123 50.000 0.00 0.00 0.00 2.57
5070 7276 7.736447 ATCGTCTCTTTCATTTTCTTTCTGT 57.264 32.000 0.00 0.00 0.00 3.41
5105 7311 3.511934 AGTGTCTAGTGATGGTGAACCTC 59.488 47.826 0.37 0.00 36.82 3.85
5128 7334 9.740239 TTACTATGTCGATTTAGTACATGGAAC 57.260 33.333 13.82 0.00 36.10 3.62
5145 7353 4.338682 ACCTGACACCGATCTTACTATGTC 59.661 45.833 0.00 0.00 37.54 3.06
5150 7358 1.743958 CGACCTGACACCGATCTTACT 59.256 52.381 0.00 0.00 0.00 2.24
5166 7374 3.432051 CTGATGACCTCGGCCGACC 62.432 68.421 27.28 16.74 0.00 4.79
5172 7380 1.753649 AGATGTGTCTGATGACCTCGG 59.246 52.381 0.00 0.00 42.28 4.63
5173 7381 3.185330 CAAGATGTGTCTGATGACCTCG 58.815 50.000 0.00 0.00 42.28 4.63
5214 7422 0.548926 TCCATGGCAAGGGGTGTCTA 60.549 55.000 6.96 0.00 30.97 2.59
5217 7425 2.440599 GTCCATGGCAAGGGGTGT 59.559 61.111 6.96 0.00 0.00 4.16
5248 7458 3.898123 GGCTAGAGACCATATCAGGAACA 59.102 47.826 0.00 0.00 0.00 3.18
5249 7459 4.156477 AGGCTAGAGACCATATCAGGAAC 58.844 47.826 0.00 0.00 0.00 3.62
5273 7483 7.663043 AAGTAACCAAAATAGACAAACCCAA 57.337 32.000 0.00 0.00 0.00 4.12
5274 7484 7.663043 AAAGTAACCAAAATAGACAAACCCA 57.337 32.000 0.00 0.00 0.00 4.51
5331 7545 1.081906 CAAGATGCCACACGTGTGC 60.082 57.895 37.33 31.00 44.34 4.57
5374 7588 1.068402 CGCATGTGGCAAAATGAGTGA 60.068 47.619 13.94 0.00 45.17 3.41
5393 7607 2.884827 TCTGCTGATGTCATCTGTTCG 58.115 47.619 17.91 9.07 0.00 3.95
5523 7739 9.438228 AAAATCATCAAAACATATCAACATGCA 57.562 25.926 0.00 0.00 0.00 3.96
5584 7806 8.816133 AACTTTAGTTGAAGCACTATGGCAACA 61.816 37.037 0.00 0.00 44.60 3.33
5699 7921 7.489113 CACTTAAAATTGCCATGGTTCATAGAC 59.511 37.037 14.67 0.00 0.00 2.59
5701 7923 6.256321 GCACTTAAAATTGCCATGGTTCATAG 59.744 38.462 14.67 3.94 32.21 2.23
5728 7950 9.260002 CCATAAACTAAAATTGCCATTGATACC 57.740 33.333 0.00 0.00 0.00 2.73
5734 7956 7.330700 CACGAACCATAAACTAAAATTGCCATT 59.669 33.333 0.00 0.00 0.00 3.16
5844 8068 5.650266 TCATGGTGTTTACACTGAAGTTGTT 59.350 36.000 12.32 0.00 45.73 2.83
5939 8175 4.142752 ACGTCGTGAGATCATCGAAACTAA 60.143 41.667 0.00 0.00 45.19 2.24
5949 8185 3.132863 TCTCGACGTCGTGAGATCA 57.867 52.632 34.40 15.06 45.19 2.92
5955 8191 0.170561 AAATCCCTCTCGACGTCGTG 59.829 55.000 34.40 31.45 40.80 4.35
5956 8192 1.742761 TAAATCCCTCTCGACGTCGT 58.257 50.000 34.40 16.45 40.80 4.34
5957 8193 2.838386 TTAAATCCCTCTCGACGTCG 57.162 50.000 31.30 31.30 41.45 5.12
5958 8194 3.181478 ACCATTAAATCCCTCTCGACGTC 60.181 47.826 5.18 5.18 0.00 4.34
5959 8195 2.764572 ACCATTAAATCCCTCTCGACGT 59.235 45.455 0.00 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.