Multiple sequence alignment - TraesCS6D01G071400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G071400 chr6D 100.000 3637 0 0 1 3637 36113316 36109680 0.000000e+00 6717
1 TraesCS6D01G071400 chr6D 93.182 88 6 0 3550 3637 36777362 36777275 2.950000e-26 130
2 TraesCS6D01G071400 chr7D 95.611 3167 88 20 288 3440 413377520 413374391 0.000000e+00 5031
3 TraesCS6D01G071400 chr7D 96.296 81 3 0 3557 3637 40665627 40665547 2.280000e-27 134
4 TraesCS6D01G071400 chr7D 96.296 81 3 0 3557 3637 108237178 108237258 2.280000e-27 134
5 TraesCS6D01G071400 chr4D 96.272 2736 59 15 716 3440 507483899 507481196 0.000000e+00 4447
6 TraesCS6D01G071400 chr4D 95.736 469 19 1 279 747 163886270 163885803 0.000000e+00 754
7 TraesCS6D01G071400 chr4A 95.922 2771 64 16 683 3440 625964748 625962014 0.000000e+00 4446
8 TraesCS6D01G071400 chr4A 95.529 425 18 1 283 707 387112481 387112058 0.000000e+00 678
9 TraesCS6D01G071400 chr7B 95.702 2769 77 16 683 3440 503193122 503190385 0.000000e+00 4416
10 TraesCS6D01G071400 chr7B 93.750 432 26 1 276 707 66190338 66190768 0.000000e+00 647
11 TraesCS6D01G071400 chr2B 96.598 1793 43 5 1658 3440 773878230 773880014 0.000000e+00 2957
12 TraesCS6D01G071400 chr1B 96.124 774 25 4 2573 3343 602263751 602264522 0.000000e+00 1258
13 TraesCS6D01G071400 chr1B 97.832 369 8 0 2211 2579 602263085 602263453 3.960000e-179 638
14 TraesCS6D01G071400 chr1B 91.057 123 9 2 3437 3558 601266563 601266442 8.080000e-37 165
15 TraesCS6D01G071400 chr2D 95.096 469 21 2 280 747 6112880 6113347 0.000000e+00 737
16 TraesCS6D01G071400 chr2A 95.349 430 20 0 278 707 44026005 44025576 0.000000e+00 684
17 TraesCS6D01G071400 chrUn 97.970 394 7 1 2327 2720 479635157 479635549 0.000000e+00 682
18 TraesCS6D01G071400 chrUn 95.294 85 4 0 3553 3637 360170594 360170678 6.330000e-28 135
19 TraesCS6D01G071400 chr3A 95.105 429 21 0 279 707 603915838 603916266 0.000000e+00 676
20 TraesCS6D01G071400 chr3A 92.275 466 30 2 283 747 26030657 26030197 0.000000e+00 656
21 TraesCS6D01G071400 chr3B 92.405 474 29 2 280 747 32987435 32987907 0.000000e+00 669
22 TraesCS6D01G071400 chr3B 96.296 81 3 0 3557 3637 763230202 763230122 2.280000e-27 134
23 TraesCS6D01G071400 chr5D 94.651 430 20 1 278 707 360981993 360981567 0.000000e+00 664
24 TraesCS6D01G071400 chr5D 93.182 88 5 1 3550 3637 529434004 529433918 1.060000e-25 128
25 TraesCS6D01G071400 chr6A 96.751 277 9 0 2 278 39918585 39918309 2.560000e-126 462
26 TraesCS6D01G071400 chr1A 95.319 235 4 1 3206 3440 516714022 516713795 2.060000e-97 366
27 TraesCS6D01G071400 chr3D 95.294 85 4 0 3553 3637 571971196 571971112 6.330000e-28 135
28 TraesCS6D01G071400 chr1D 96.296 81 3 0 3557 3637 142341430 142341510 2.280000e-27 134
29 TraesCS6D01G071400 chr1D 96.296 81 3 0 3557 3637 328578401 328578321 2.280000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G071400 chr6D 36109680 36113316 3636 True 6717 6717 100.000 1 3637 1 chr6D.!!$R1 3636
1 TraesCS6D01G071400 chr7D 413374391 413377520 3129 True 5031 5031 95.611 288 3440 1 chr7D.!!$R2 3152
2 TraesCS6D01G071400 chr4D 507481196 507483899 2703 True 4447 4447 96.272 716 3440 1 chr4D.!!$R2 2724
3 TraesCS6D01G071400 chr4A 625962014 625964748 2734 True 4446 4446 95.922 683 3440 1 chr4A.!!$R2 2757
4 TraesCS6D01G071400 chr7B 503190385 503193122 2737 True 4416 4416 95.702 683 3440 1 chr7B.!!$R1 2757
5 TraesCS6D01G071400 chr2B 773878230 773880014 1784 False 2957 2957 96.598 1658 3440 1 chr2B.!!$F1 1782
6 TraesCS6D01G071400 chr1B 602263085 602264522 1437 False 948 1258 96.978 2211 3343 2 chr1B.!!$F1 1132

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.322322 ATGCAATGGCTTGTTGGGTG 59.678 50.0 0.0 0.0 41.91 4.61 F
393 394 0.457166 TCGATGCGGATTCGACGTTT 60.457 50.0 0.0 0.0 40.44 3.60 F
1181 1199 1.048601 GGATCAAGACCCTGGCGATA 58.951 55.0 0.0 0.0 0.00 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1154 1167 0.107459 GGGTCTTGATCCACCAGAGC 60.107 60.000 7.65 5.34 33.91 4.09 R
1950 1977 1.213678 TGGAAGGGCCAATCTCATCAG 59.786 52.381 6.18 0.00 45.87 2.90 R
3107 3442 0.882484 TCGGCTGTCGTTGCATTCAA 60.882 50.000 0.09 0.00 40.32 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.983402 CAGTGGTGAAGCTGATGTTG 57.017 50.000 0.00 0.00 34.87 3.33
20 21 2.497138 CAGTGGTGAAGCTGATGTTGA 58.503 47.619 0.00 0.00 34.87 3.18
21 22 2.225019 CAGTGGTGAAGCTGATGTTGAC 59.775 50.000 0.00 0.00 34.87 3.18
22 23 2.105477 AGTGGTGAAGCTGATGTTGACT 59.895 45.455 0.00 0.00 0.00 3.41
23 24 3.324846 AGTGGTGAAGCTGATGTTGACTA 59.675 43.478 0.00 0.00 0.00 2.59
24 25 4.019860 AGTGGTGAAGCTGATGTTGACTAT 60.020 41.667 0.00 0.00 0.00 2.12
25 26 4.697352 GTGGTGAAGCTGATGTTGACTATT 59.303 41.667 0.00 0.00 0.00 1.73
26 27 5.182001 GTGGTGAAGCTGATGTTGACTATTT 59.818 40.000 0.00 0.00 0.00 1.40
27 28 5.181811 TGGTGAAGCTGATGTTGACTATTTG 59.818 40.000 0.00 0.00 0.00 2.32
28 29 5.412594 GGTGAAGCTGATGTTGACTATTTGA 59.587 40.000 0.00 0.00 0.00 2.69
29 30 6.402983 GGTGAAGCTGATGTTGACTATTTGAG 60.403 42.308 0.00 0.00 0.00 3.02
30 31 6.148480 GTGAAGCTGATGTTGACTATTTGAGT 59.852 38.462 0.00 0.00 42.90 3.41
100 101 5.895636 ACAAAAGTGTTTGACTCATGACA 57.104 34.783 6.21 0.00 45.99 3.58
101 102 6.455360 ACAAAAGTGTTTGACTCATGACAT 57.545 33.333 6.21 0.00 45.99 3.06
102 103 6.866480 ACAAAAGTGTTTGACTCATGACATT 58.134 32.000 6.21 0.00 45.99 2.71
103 104 7.322664 ACAAAAGTGTTTGACTCATGACATTT 58.677 30.769 6.21 0.00 45.99 2.32
104 105 8.465999 ACAAAAGTGTTTGACTCATGACATTTA 58.534 29.630 6.21 0.00 45.99 1.40
105 106 9.467258 CAAAAGTGTTTGACTCATGACATTTAT 57.533 29.630 0.00 0.00 45.99 1.40
108 109 9.683069 AAGTGTTTGACTCATGACATTTATTTC 57.317 29.630 0.00 0.00 31.73 2.17
109 110 9.071276 AGTGTTTGACTCATGACATTTATTTCT 57.929 29.630 0.00 0.00 0.00 2.52
110 111 9.334693 GTGTTTGACTCATGACATTTATTTCTC 57.665 33.333 0.00 0.00 0.00 2.87
111 112 8.514594 TGTTTGACTCATGACATTTATTTCTCC 58.485 33.333 0.00 0.00 0.00 3.71
112 113 8.514594 GTTTGACTCATGACATTTATTTCTCCA 58.485 33.333 0.00 0.00 0.00 3.86
113 114 7.615582 TGACTCATGACATTTATTTCTCCAC 57.384 36.000 0.00 0.00 0.00 4.02
114 115 7.167535 TGACTCATGACATTTATTTCTCCACA 58.832 34.615 0.00 0.00 0.00 4.17
115 116 7.335171 TGACTCATGACATTTATTTCTCCACAG 59.665 37.037 0.00 0.00 0.00 3.66
116 117 6.600822 ACTCATGACATTTATTTCTCCACAGG 59.399 38.462 0.00 0.00 0.00 4.00
117 118 6.484288 TCATGACATTTATTTCTCCACAGGT 58.516 36.000 0.00 0.00 0.00 4.00
118 119 7.629157 TCATGACATTTATTTCTCCACAGGTA 58.371 34.615 0.00 0.00 0.00 3.08
119 120 8.274322 TCATGACATTTATTTCTCCACAGGTAT 58.726 33.333 0.00 0.00 0.00 2.73
120 121 8.562892 CATGACATTTATTTCTCCACAGGTATC 58.437 37.037 0.00 0.00 0.00 2.24
121 122 7.861629 TGACATTTATTTCTCCACAGGTATCT 58.138 34.615 0.00 0.00 0.00 1.98
122 123 8.988060 TGACATTTATTTCTCCACAGGTATCTA 58.012 33.333 0.00 0.00 0.00 1.98
123 124 9.482627 GACATTTATTTCTCCACAGGTATCTAG 57.517 37.037 0.00 0.00 0.00 2.43
124 125 9.213777 ACATTTATTTCTCCACAGGTATCTAGA 57.786 33.333 0.00 0.00 0.00 2.43
125 126 9.703892 CATTTATTTCTCCACAGGTATCTAGAG 57.296 37.037 0.00 0.00 0.00 2.43
126 127 8.840200 TTTATTTCTCCACAGGTATCTAGAGT 57.160 34.615 0.00 0.00 0.00 3.24
127 128 8.840200 TTATTTCTCCACAGGTATCTAGAGTT 57.160 34.615 0.00 0.00 0.00 3.01
128 129 9.931698 TTATTTCTCCACAGGTATCTAGAGTTA 57.068 33.333 0.00 0.00 0.00 2.24
129 130 7.642082 TTTCTCCACAGGTATCTAGAGTTAC 57.358 40.000 0.00 0.00 0.00 2.50
130 131 6.323210 TCTCCACAGGTATCTAGAGTTACA 57.677 41.667 0.00 0.00 0.00 2.41
131 132 6.912426 TCTCCACAGGTATCTAGAGTTACAT 58.088 40.000 0.00 0.00 0.00 2.29
132 133 7.355101 TCTCCACAGGTATCTAGAGTTACATT 58.645 38.462 0.00 0.00 0.00 2.71
133 134 7.502895 TCTCCACAGGTATCTAGAGTTACATTC 59.497 40.741 0.00 0.00 0.00 2.67
134 135 7.355101 TCCACAGGTATCTAGAGTTACATTCT 58.645 38.462 0.00 0.00 0.00 2.40
135 136 7.285629 TCCACAGGTATCTAGAGTTACATTCTG 59.714 40.741 0.00 3.28 0.00 3.02
136 137 7.429633 CACAGGTATCTAGAGTTACATTCTGG 58.570 42.308 0.00 0.00 0.00 3.86
137 138 7.068839 CACAGGTATCTAGAGTTACATTCTGGT 59.931 40.741 0.00 0.00 0.00 4.00
138 139 7.068839 ACAGGTATCTAGAGTTACATTCTGGTG 59.931 40.741 0.00 0.00 0.00 4.17
139 140 6.551601 AGGTATCTAGAGTTACATTCTGGTGG 59.448 42.308 0.00 0.00 0.00 4.61
140 141 4.737855 TCTAGAGTTACATTCTGGTGGC 57.262 45.455 0.00 0.00 0.00 5.01
141 142 4.353777 TCTAGAGTTACATTCTGGTGGCT 58.646 43.478 0.00 0.00 0.00 4.75
142 143 5.516044 TCTAGAGTTACATTCTGGTGGCTA 58.484 41.667 0.00 0.00 0.00 3.93
143 144 5.955959 TCTAGAGTTACATTCTGGTGGCTAA 59.044 40.000 0.00 0.00 0.00 3.09
144 145 5.091261 AGAGTTACATTCTGGTGGCTAAG 57.909 43.478 0.00 0.00 0.00 2.18
145 146 4.777896 AGAGTTACATTCTGGTGGCTAAGA 59.222 41.667 0.00 0.00 0.00 2.10
146 147 5.426833 AGAGTTACATTCTGGTGGCTAAGAT 59.573 40.000 0.00 0.00 0.00 2.40
147 148 5.431765 AGTTACATTCTGGTGGCTAAGATG 58.568 41.667 0.00 0.00 0.00 2.90
148 149 2.648059 ACATTCTGGTGGCTAAGATGC 58.352 47.619 0.00 0.00 0.00 3.91
149 150 2.025981 ACATTCTGGTGGCTAAGATGCA 60.026 45.455 0.00 0.00 34.04 3.96
150 151 2.877097 TTCTGGTGGCTAAGATGCAA 57.123 45.000 0.00 0.00 34.04 4.08
151 152 3.370840 TTCTGGTGGCTAAGATGCAAT 57.629 42.857 0.00 0.00 34.04 3.56
152 153 2.646930 TCTGGTGGCTAAGATGCAATG 58.353 47.619 0.00 0.00 34.04 2.82
153 154 1.679680 CTGGTGGCTAAGATGCAATGG 59.320 52.381 0.00 0.00 34.04 3.16
154 155 0.386838 GGTGGCTAAGATGCAATGGC 59.613 55.000 0.00 0.00 41.68 4.40
155 156 1.396653 GTGGCTAAGATGCAATGGCT 58.603 50.000 0.00 0.00 41.91 4.75
156 157 1.753073 GTGGCTAAGATGCAATGGCTT 59.247 47.619 0.00 0.00 41.91 4.35
157 158 1.752498 TGGCTAAGATGCAATGGCTTG 59.248 47.619 0.00 0.00 41.91 4.01
158 159 1.753073 GGCTAAGATGCAATGGCTTGT 59.247 47.619 0.00 0.00 41.91 3.16
159 160 2.167075 GGCTAAGATGCAATGGCTTGTT 59.833 45.455 0.00 0.00 41.91 2.83
160 161 3.184541 GCTAAGATGCAATGGCTTGTTG 58.815 45.455 0.00 0.00 41.91 3.33
161 162 2.754946 AAGATGCAATGGCTTGTTGG 57.245 45.000 0.00 0.00 41.91 3.77
162 163 0.899720 AGATGCAATGGCTTGTTGGG 59.100 50.000 0.00 0.00 41.91 4.12
163 164 0.609662 GATGCAATGGCTTGTTGGGT 59.390 50.000 0.00 0.00 41.91 4.51
164 165 0.322322 ATGCAATGGCTTGTTGGGTG 59.678 50.000 0.00 0.00 41.91 4.61
165 166 1.668793 GCAATGGCTTGTTGGGTGC 60.669 57.895 0.00 0.00 36.96 5.01
166 167 1.373246 CAATGGCTTGTTGGGTGCG 60.373 57.895 0.00 0.00 0.00 5.34
167 168 1.530419 AATGGCTTGTTGGGTGCGA 60.530 52.632 0.00 0.00 0.00 5.10
168 169 1.526575 AATGGCTTGTTGGGTGCGAG 61.527 55.000 0.00 0.00 0.00 5.03
169 170 2.594592 GGCTTGTTGGGTGCGAGT 60.595 61.111 0.00 0.00 0.00 4.18
170 171 2.193536 GGCTTGTTGGGTGCGAGTT 61.194 57.895 0.00 0.00 0.00 3.01
171 172 0.887387 GGCTTGTTGGGTGCGAGTTA 60.887 55.000 0.00 0.00 0.00 2.24
172 173 1.165270 GCTTGTTGGGTGCGAGTTAT 58.835 50.000 0.00 0.00 0.00 1.89
173 174 1.539827 GCTTGTTGGGTGCGAGTTATT 59.460 47.619 0.00 0.00 0.00 1.40
174 175 2.414161 GCTTGTTGGGTGCGAGTTATTC 60.414 50.000 0.00 0.00 0.00 1.75
175 176 1.816074 TGTTGGGTGCGAGTTATTCC 58.184 50.000 0.00 0.00 0.00 3.01
176 177 1.072489 TGTTGGGTGCGAGTTATTCCA 59.928 47.619 0.00 0.00 0.00 3.53
177 178 2.290641 TGTTGGGTGCGAGTTATTCCAT 60.291 45.455 0.00 0.00 0.00 3.41
178 179 2.752903 GTTGGGTGCGAGTTATTCCATT 59.247 45.455 0.00 0.00 0.00 3.16
179 180 3.080300 TGGGTGCGAGTTATTCCATTT 57.920 42.857 0.00 0.00 0.00 2.32
180 181 3.013921 TGGGTGCGAGTTATTCCATTTC 58.986 45.455 0.00 0.00 0.00 2.17
181 182 3.013921 GGGTGCGAGTTATTCCATTTCA 58.986 45.455 0.00 0.00 0.00 2.69
182 183 3.632145 GGGTGCGAGTTATTCCATTTCAT 59.368 43.478 0.00 0.00 0.00 2.57
183 184 4.819630 GGGTGCGAGTTATTCCATTTCATA 59.180 41.667 0.00 0.00 0.00 2.15
184 185 5.473504 GGGTGCGAGTTATTCCATTTCATAT 59.526 40.000 0.00 0.00 0.00 1.78
185 186 6.373779 GGTGCGAGTTATTCCATTTCATATG 58.626 40.000 0.00 0.00 0.00 1.78
186 187 5.853282 GTGCGAGTTATTCCATTTCATATGC 59.147 40.000 0.00 0.00 0.00 3.14
187 188 5.764686 TGCGAGTTATTCCATTTCATATGCT 59.235 36.000 0.00 0.00 0.00 3.79
188 189 6.073058 TGCGAGTTATTCCATTTCATATGCTC 60.073 38.462 0.00 0.00 0.00 4.26
189 190 6.621596 GCGAGTTATTCCATTTCATATGCTCC 60.622 42.308 0.00 0.00 0.00 4.70
190 191 6.427853 CGAGTTATTCCATTTCATATGCTCCA 59.572 38.462 0.00 0.00 0.00 3.86
191 192 7.516198 AGTTATTCCATTTCATATGCTCCAC 57.484 36.000 0.00 0.00 0.00 4.02
192 193 7.062322 AGTTATTCCATTTCATATGCTCCACA 58.938 34.615 0.00 0.00 0.00 4.17
193 194 5.779529 ATTCCATTTCATATGCTCCACAC 57.220 39.130 0.00 0.00 0.00 3.82
194 195 3.205338 TCCATTTCATATGCTCCACACG 58.795 45.455 0.00 0.00 0.00 4.49
195 196 2.291465 CCATTTCATATGCTCCACACGG 59.709 50.000 0.00 0.00 0.00 4.94
196 197 3.205338 CATTTCATATGCTCCACACGGA 58.795 45.455 0.00 0.00 39.79 4.69
197 198 3.342377 TTTCATATGCTCCACACGGAA 57.658 42.857 0.00 0.00 42.21 4.30
198 199 3.342377 TTCATATGCTCCACACGGAAA 57.658 42.857 0.00 0.00 42.21 3.13
199 200 3.558931 TCATATGCTCCACACGGAAAT 57.441 42.857 0.00 0.00 42.21 2.17
200 201 3.884895 TCATATGCTCCACACGGAAATT 58.115 40.909 0.00 0.00 42.21 1.82
201 202 5.029807 TCATATGCTCCACACGGAAATTA 57.970 39.130 0.00 0.00 42.21 1.40
202 203 5.432645 TCATATGCTCCACACGGAAATTAA 58.567 37.500 0.00 0.00 42.21 1.40
203 204 5.295787 TCATATGCTCCACACGGAAATTAAC 59.704 40.000 0.00 0.00 42.21 2.01
204 205 2.852449 TGCTCCACACGGAAATTAACA 58.148 42.857 0.00 0.00 42.21 2.41
205 206 2.550606 TGCTCCACACGGAAATTAACAC 59.449 45.455 0.00 0.00 42.21 3.32
206 207 2.812011 GCTCCACACGGAAATTAACACT 59.188 45.455 0.00 0.00 42.21 3.55
207 208 3.364964 GCTCCACACGGAAATTAACACTG 60.365 47.826 0.00 0.00 42.21 3.66
208 209 3.811083 TCCACACGGAAATTAACACTGT 58.189 40.909 0.00 0.00 38.83 3.55
209 210 3.562141 TCCACACGGAAATTAACACTGTG 59.438 43.478 6.19 6.19 43.74 3.66
210 211 3.304391 CCACACGGAAATTAACACTGTGG 60.304 47.826 13.09 13.07 42.83 4.17
211 212 2.292292 ACACGGAAATTAACACTGTGGC 59.708 45.455 13.09 0.00 42.83 5.01
212 213 2.292016 CACGGAAATTAACACTGTGGCA 59.708 45.455 13.09 0.00 37.29 4.92
213 214 3.057596 CACGGAAATTAACACTGTGGCAT 60.058 43.478 13.09 0.64 37.29 4.40
214 215 3.057596 ACGGAAATTAACACTGTGGCATG 60.058 43.478 13.09 0.00 0.00 4.06
215 216 3.253230 GGAAATTAACACTGTGGCATGC 58.747 45.455 9.90 9.90 0.00 4.06
216 217 3.305950 GGAAATTAACACTGTGGCATGCA 60.306 43.478 21.36 2.54 0.00 3.96
217 218 3.302365 AATTAACACTGTGGCATGCAC 57.698 42.857 21.36 15.73 0.00 4.57
218 219 0.958091 TTAACACTGTGGCATGCACC 59.042 50.000 21.36 9.52 0.00 5.01
219 220 1.233950 TAACACTGTGGCATGCACCG 61.234 55.000 21.36 13.89 0.00 4.94
220 221 3.740397 CACTGTGGCATGCACCGG 61.740 66.667 21.36 15.85 0.00 5.28
221 222 4.269523 ACTGTGGCATGCACCGGT 62.270 61.111 21.36 16.53 0.00 5.28
222 223 3.740397 CTGTGGCATGCACCGGTG 61.740 66.667 30.66 30.66 0.00 4.94
223 224 4.262089 TGTGGCATGCACCGGTGA 62.262 61.111 38.30 22.50 0.00 4.02
224 225 2.751436 GTGGCATGCACCGGTGAT 60.751 61.111 38.30 23.67 0.00 3.06
225 226 2.035469 TGGCATGCACCGGTGATT 59.965 55.556 38.30 20.81 0.00 2.57
226 227 1.029408 GTGGCATGCACCGGTGATTA 61.029 55.000 38.30 22.45 0.00 1.75
227 228 0.747644 TGGCATGCACCGGTGATTAG 60.748 55.000 38.30 22.96 0.00 1.73
228 229 0.748005 GGCATGCACCGGTGATTAGT 60.748 55.000 38.30 14.68 0.00 2.24
229 230 1.094785 GCATGCACCGGTGATTAGTT 58.905 50.000 38.30 11.80 0.00 2.24
230 231 1.202177 GCATGCACCGGTGATTAGTTG 60.202 52.381 38.30 22.54 0.00 3.16
231 232 2.355197 CATGCACCGGTGATTAGTTGA 58.645 47.619 38.30 10.25 0.00 3.18
232 233 2.552599 TGCACCGGTGATTAGTTGAA 57.447 45.000 38.30 0.00 0.00 2.69
233 234 3.066291 TGCACCGGTGATTAGTTGAAT 57.934 42.857 38.30 0.00 0.00 2.57
234 235 3.006940 TGCACCGGTGATTAGTTGAATC 58.993 45.455 38.30 15.58 43.84 2.52
235 236 3.270877 GCACCGGTGATTAGTTGAATCT 58.729 45.455 38.30 0.00 43.90 2.40
236 237 3.689649 GCACCGGTGATTAGTTGAATCTT 59.310 43.478 38.30 0.00 43.90 2.40
237 238 4.201822 GCACCGGTGATTAGTTGAATCTTC 60.202 45.833 38.30 10.33 43.90 2.87
238 239 4.935205 CACCGGTGATTAGTTGAATCTTCA 59.065 41.667 31.31 0.00 43.90 3.02
239 240 5.063944 CACCGGTGATTAGTTGAATCTTCAG 59.936 44.000 31.31 0.00 43.90 3.02
240 241 4.034510 CCGGTGATTAGTTGAATCTTCAGC 59.965 45.833 0.00 0.00 43.90 4.26
242 243 5.220548 CGGTGATTAGTTGAATCTTCAGCTG 60.221 44.000 16.60 7.63 46.21 4.24
243 244 5.877012 GGTGATTAGTTGAATCTTCAGCTGA 59.123 40.000 13.74 13.74 46.21 4.26
244 245 6.541641 GGTGATTAGTTGAATCTTCAGCTGAT 59.458 38.462 19.04 14.20 46.21 2.90
246 247 7.188468 GATTAGTTGAATCTTCAGCTGATCC 57.812 40.000 19.04 5.87 46.26 3.36
247 248 3.883669 AGTTGAATCTTCAGCTGATCCC 58.116 45.455 19.04 5.58 45.26 3.85
248 249 3.265221 AGTTGAATCTTCAGCTGATCCCA 59.735 43.478 19.04 8.78 45.26 4.37
249 250 4.079901 AGTTGAATCTTCAGCTGATCCCAT 60.080 41.667 19.04 4.37 45.26 4.00
250 251 4.082665 TGAATCTTCAGCTGATCCCATC 57.917 45.455 19.04 12.76 32.50 3.51
251 252 3.715315 TGAATCTTCAGCTGATCCCATCT 59.285 43.478 19.04 0.00 32.50 2.90
252 253 4.903649 TGAATCTTCAGCTGATCCCATCTA 59.096 41.667 19.04 0.00 32.50 1.98
253 254 5.367644 TGAATCTTCAGCTGATCCCATCTAA 59.632 40.000 19.04 0.00 32.50 2.10
254 255 6.044054 TGAATCTTCAGCTGATCCCATCTAAT 59.956 38.462 19.04 0.00 32.50 1.73
255 256 5.224821 TCTTCAGCTGATCCCATCTAATG 57.775 43.478 19.04 0.00 0.00 1.90
256 257 4.903649 TCTTCAGCTGATCCCATCTAATGA 59.096 41.667 19.04 0.00 0.00 2.57
257 258 5.367644 TCTTCAGCTGATCCCATCTAATGAA 59.632 40.000 19.04 0.00 0.00 2.57
258 259 5.837770 TCAGCTGATCCCATCTAATGAAT 57.162 39.130 13.74 0.00 0.00 2.57
259 260 5.557866 TCAGCTGATCCCATCTAATGAATG 58.442 41.667 13.74 0.00 0.00 2.67
260 261 5.072736 TCAGCTGATCCCATCTAATGAATGT 59.927 40.000 13.74 0.00 0.00 2.71
261 262 5.768662 CAGCTGATCCCATCTAATGAATGTT 59.231 40.000 8.42 0.00 0.00 2.71
262 263 5.768662 AGCTGATCCCATCTAATGAATGTTG 59.231 40.000 0.00 0.00 0.00 3.33
263 264 5.766670 GCTGATCCCATCTAATGAATGTTGA 59.233 40.000 0.00 0.00 0.00 3.18
264 265 6.263842 GCTGATCCCATCTAATGAATGTTGAA 59.736 38.462 0.00 0.00 0.00 2.69
265 266 7.572523 TGATCCCATCTAATGAATGTTGAAC 57.427 36.000 0.00 0.00 0.00 3.18
266 267 7.118060 TGATCCCATCTAATGAATGTTGAACA 58.882 34.615 0.00 0.00 0.00 3.18
267 268 7.781219 TGATCCCATCTAATGAATGTTGAACAT 59.219 33.333 4.72 4.72 41.31 2.71
268 269 9.288576 GATCCCATCTAATGAATGTTGAACATA 57.711 33.333 11.70 0.00 37.97 2.29
269 270 8.681486 TCCCATCTAATGAATGTTGAACATAG 57.319 34.615 11.70 5.03 37.97 2.23
270 271 8.493607 TCCCATCTAATGAATGTTGAACATAGA 58.506 33.333 11.70 10.36 37.97 1.98
271 272 9.123902 CCCATCTAATGAATGTTGAACATAGAA 57.876 33.333 11.70 0.77 37.97 2.10
276 277 7.745022 AATGAATGTTGAACATAGAATTGCG 57.255 32.000 11.70 0.00 37.97 4.85
277 278 5.094812 TGAATGTTGAACATAGAATTGCGC 58.905 37.500 11.70 0.00 37.97 6.09
278 279 3.485947 TGTTGAACATAGAATTGCGCC 57.514 42.857 4.18 0.00 0.00 6.53
279 280 2.163412 TGTTGAACATAGAATTGCGCCC 59.837 45.455 4.18 0.00 0.00 6.13
280 281 2.121291 TGAACATAGAATTGCGCCCA 57.879 45.000 4.18 0.00 0.00 5.36
281 282 2.441410 TGAACATAGAATTGCGCCCAA 58.559 42.857 4.18 0.00 35.01 4.12
282 283 2.822561 TGAACATAGAATTGCGCCCAAA 59.177 40.909 4.18 0.00 34.05 3.28
283 284 3.119531 TGAACATAGAATTGCGCCCAAAG 60.120 43.478 4.18 0.00 34.05 2.77
284 285 2.446435 ACATAGAATTGCGCCCAAAGT 58.554 42.857 4.18 0.00 34.05 2.66
285 286 3.616219 ACATAGAATTGCGCCCAAAGTA 58.384 40.909 4.18 0.00 34.05 2.24
286 287 3.627577 ACATAGAATTGCGCCCAAAGTAG 59.372 43.478 4.18 0.00 34.05 2.57
388 389 2.509052 AAGATTCGATGCGGATTCGA 57.491 45.000 0.00 7.21 43.35 3.71
393 394 0.457166 TCGATGCGGATTCGACGTTT 60.457 50.000 0.00 0.00 40.44 3.60
507 508 5.244178 ACGAACTCCTCATTTTACTCTCTGT 59.756 40.000 0.00 0.00 0.00 3.41
521 522 1.346722 TCTCTGTCCCGTTCTTTTCCC 59.653 52.381 0.00 0.00 0.00 3.97
544 545 4.163649 CCTCCCCTAAATAACTCCTCGTTT 59.836 45.833 0.00 0.00 37.05 3.60
571 572 1.747355 CCAATTACTCCAAGGCTGCTG 59.253 52.381 0.00 0.00 0.00 4.41
601 602 4.886755 TCCATTGGGAAGGAGATGATTT 57.113 40.909 2.09 0.00 41.32 2.17
602 603 5.992564 TCCATTGGGAAGGAGATGATTTA 57.007 39.130 2.09 0.00 41.32 1.40
604 605 6.925934 TCCATTGGGAAGGAGATGATTTATT 58.074 36.000 2.09 0.00 41.32 1.40
605 606 7.364627 TCCATTGGGAAGGAGATGATTTATTT 58.635 34.615 2.09 0.00 41.32 1.40
607 608 9.146586 CCATTGGGAAGGAGATGATTTATTTTA 57.853 33.333 0.00 0.00 35.59 1.52
609 610 9.942526 ATTGGGAAGGAGATGATTTATTTTAGT 57.057 29.630 0.00 0.00 0.00 2.24
610 611 8.980481 TGGGAAGGAGATGATTTATTTTAGTC 57.020 34.615 0.00 0.00 0.00 2.59
611 612 8.781951 TGGGAAGGAGATGATTTATTTTAGTCT 58.218 33.333 0.00 0.00 0.00 3.24
612 613 9.634021 GGGAAGGAGATGATTTATTTTAGTCTT 57.366 33.333 0.00 0.00 0.00 3.01
622 623 9.830975 TGATTTATTTTAGTCTTCATGGATCGA 57.169 29.630 0.00 0.00 0.00 3.59
624 625 7.694388 TTATTTTAGTCTTCATGGATCGACG 57.306 36.000 0.00 0.00 0.00 5.12
625 626 4.976224 TTTAGTCTTCATGGATCGACGA 57.024 40.909 0.00 0.00 0.00 4.20
626 627 5.515797 TTTAGTCTTCATGGATCGACGAT 57.484 39.130 10.78 10.78 0.00 3.73
627 628 3.361794 AGTCTTCATGGATCGACGATG 57.638 47.619 16.49 2.04 36.32 3.84
628 629 1.789464 GTCTTCATGGATCGACGATGC 59.211 52.381 21.00 21.00 35.25 3.91
658 659 4.748144 CCAGCCCAGCCAGTTCCC 62.748 72.222 0.00 0.00 0.00 3.97
678 679 3.436180 CCCTGTATAAGTACTCCCTCGGT 60.436 52.174 0.00 0.00 0.00 4.69
720 727 2.685017 ATCCAGCGACCAGAGGCA 60.685 61.111 0.00 0.00 0.00 4.75
844 851 4.643784 AGATTCAGGTACACCTAACCTACG 59.356 45.833 0.00 0.00 45.78 3.51
1005 1013 1.751351 GTGACATCGAGGAGGATGACA 59.249 52.381 3.06 6.59 45.27 3.58
1008 1016 1.114627 CATCGAGGAGGATGACACCA 58.885 55.000 0.00 0.00 45.27 4.17
1102 1115 2.162408 GAGCATGGTACTGCAAAACCTC 59.838 50.000 16.00 4.19 44.77 3.85
1154 1167 3.634397 TGATGCACCTAAAGGGAAGAG 57.366 47.619 0.20 0.00 40.27 2.85
1167 1185 1.198713 GGAAGAGCTCTGGTGGATCA 58.801 55.000 19.06 0.00 0.00 2.92
1168 1186 1.556911 GGAAGAGCTCTGGTGGATCAA 59.443 52.381 19.06 0.00 0.00 2.57
1169 1187 2.419851 GGAAGAGCTCTGGTGGATCAAG 60.420 54.545 19.06 0.00 0.00 3.02
1170 1188 2.244486 AGAGCTCTGGTGGATCAAGA 57.756 50.000 17.42 0.00 0.00 3.02
1171 1189 1.830477 AGAGCTCTGGTGGATCAAGAC 59.170 52.381 17.42 0.00 0.00 3.01
1181 1199 1.048601 GGATCAAGACCCTGGCGATA 58.951 55.000 0.00 0.00 0.00 2.92
1275 1293 3.617669 CAAGACGAAACAAATTGCTCGT 58.382 40.909 19.22 19.22 40.46 4.18
1706 1725 2.224670 TGGCTCCGGTTAGACAAACATT 60.225 45.455 0.00 0.00 40.08 2.71
1797 1824 4.982241 ATAGGTATTCCCATGGTGTCTG 57.018 45.455 11.73 0.00 34.66 3.51
1822 1849 2.875933 TGTTTCTGACGGATGGACAAAC 59.124 45.455 0.00 0.00 0.00 2.93
1942 1969 5.709631 TGAAGCCATTGCACAATTCTTACTA 59.290 36.000 0.00 0.00 41.13 1.82
1950 1977 4.215399 TGCACAATTCTTACTACAAGCCAC 59.785 41.667 0.00 0.00 0.00 5.01
1954 1981 6.372659 CACAATTCTTACTACAAGCCACTGAT 59.627 38.462 0.00 0.00 0.00 2.90
2179 2206 8.367911 TCACACACTGAATCTAGTATTCAAAGT 58.632 33.333 14.48 12.93 37.55 2.66
2270 2299 1.680338 ACCACCAGCACTTTCAAGAC 58.320 50.000 0.00 0.00 0.00 3.01
2579 2912 9.220767 GAAGGTCCAAAATCTGGTGATATATAC 57.779 37.037 0.00 0.00 46.51 1.47
2580 2913 7.386851 AGGTCCAAAATCTGGTGATATATACG 58.613 38.462 0.00 0.00 46.51 3.06
2827 3160 4.422057 TGACAGTGAGGTTATGGAAGGTA 58.578 43.478 0.00 0.00 0.00 3.08
2964 3299 1.731433 GCAGCCACGATGAATGCCAT 61.731 55.000 0.00 0.00 38.43 4.40
3075 3410 3.127030 GCCGAAAGAAATTGGAGTACCTG 59.873 47.826 0.00 0.00 37.04 4.00
3174 3509 2.104963 AGCGTCTGAAGAGGAGGTTTTT 59.895 45.455 4.26 0.00 32.08 1.94
3327 3662 2.095567 CACCACGCAAAATTCAGAGGAG 60.096 50.000 0.00 0.00 0.00 3.69
3442 3777 8.850007 AGTTCTCTTTTAATTGAAGGTACTCC 57.150 34.615 0.00 0.00 38.49 3.85
3443 3778 7.883833 AGTTCTCTTTTAATTGAAGGTACTCCC 59.116 37.037 0.00 0.00 38.49 4.30
3445 3780 7.621796 TCTCTTTTAATTGAAGGTACTCCCTC 58.378 38.462 0.00 0.00 45.47 4.30
3446 3781 6.718294 TCTTTTAATTGAAGGTACTCCCTCC 58.282 40.000 0.00 0.00 45.47 4.30
3447 3782 6.504279 TCTTTTAATTGAAGGTACTCCCTCCT 59.496 38.462 0.00 0.00 45.47 3.69
3448 3783 7.681168 TCTTTTAATTGAAGGTACTCCCTCCTA 59.319 37.037 0.00 0.00 45.47 2.94
3449 3784 8.401955 TTTTAATTGAAGGTACTCCCTCCTAT 57.598 34.615 0.00 0.00 45.47 2.57
3450 3785 7.613551 TTAATTGAAGGTACTCCCTCCTATC 57.386 40.000 0.00 0.00 45.47 2.08
3451 3786 3.614568 TGAAGGTACTCCCTCCTATCC 57.385 52.381 0.00 0.00 45.47 2.59
3452 3787 3.140143 TGAAGGTACTCCCTCCTATCCT 58.860 50.000 0.00 0.00 45.47 3.24
3453 3788 3.536434 TGAAGGTACTCCCTCCTATCCTT 59.464 47.826 0.00 0.00 45.47 3.36
3454 3789 4.015541 TGAAGGTACTCCCTCCTATCCTTT 60.016 45.833 0.00 0.00 45.47 3.11
3455 3790 4.645968 AGGTACTCCCTCCTATCCTTTT 57.354 45.455 0.00 0.00 40.71 2.27
3456 3791 4.974194 AGGTACTCCCTCCTATCCTTTTT 58.026 43.478 0.00 0.00 40.71 1.94
3478 3813 7.795431 TTTTCTTTGCGCATAAGTAGAAATG 57.205 32.000 12.75 0.00 33.25 2.32
3479 3814 4.908736 TCTTTGCGCATAAGTAGAAATGC 58.091 39.130 12.75 0.00 44.02 3.56
3486 3821 5.532025 GCATAAGTAGAAATGCGGATACC 57.468 43.478 0.00 0.00 39.15 2.73
3487 3822 4.994852 GCATAAGTAGAAATGCGGATACCA 59.005 41.667 0.00 0.00 39.15 3.25
3488 3823 5.468746 GCATAAGTAGAAATGCGGATACCAA 59.531 40.000 0.00 0.00 39.15 3.67
3489 3824 6.347725 GCATAAGTAGAAATGCGGATACCAAG 60.348 42.308 0.00 0.00 39.15 3.61
3490 3825 4.073293 AGTAGAAATGCGGATACCAAGG 57.927 45.455 0.00 0.00 0.00 3.61
3491 3826 3.709653 AGTAGAAATGCGGATACCAAGGA 59.290 43.478 0.00 0.00 0.00 3.36
3492 3827 3.199880 AGAAATGCGGATACCAAGGAG 57.800 47.619 0.00 0.00 0.00 3.69
3493 3828 2.158755 AGAAATGCGGATACCAAGGAGG 60.159 50.000 0.00 0.00 45.67 4.30
3494 3829 0.474184 AATGCGGATACCAAGGAGGG 59.526 55.000 0.00 0.00 43.89 4.30
3495 3830 0.399949 ATGCGGATACCAAGGAGGGA 60.400 55.000 0.00 0.00 43.89 4.20
3496 3831 1.335132 TGCGGATACCAAGGAGGGAC 61.335 60.000 0.00 0.00 43.89 4.46
3514 3849 6.102897 AGGGACTCGATGTATATTTTCTGG 57.897 41.667 0.00 0.00 0.00 3.86
3515 3850 5.839063 AGGGACTCGATGTATATTTTCTGGA 59.161 40.000 0.00 0.00 0.00 3.86
3516 3851 5.927115 GGGACTCGATGTATATTTTCTGGAC 59.073 44.000 0.00 0.00 0.00 4.02
3517 3852 6.239345 GGGACTCGATGTATATTTTCTGGACT 60.239 42.308 0.00 0.00 0.00 3.85
3518 3853 7.039923 GGGACTCGATGTATATTTTCTGGACTA 60.040 40.741 0.00 0.00 0.00 2.59
3519 3854 8.524487 GGACTCGATGTATATTTTCTGGACTAT 58.476 37.037 0.00 0.00 0.00 2.12
3520 3855 9.915629 GACTCGATGTATATTTTCTGGACTATT 57.084 33.333 0.00 0.00 0.00 1.73
3524 3859 9.599322 CGATGTATATTTTCTGGACTATTTTGC 57.401 33.333 0.00 0.00 0.00 3.68
3525 3860 9.899226 GATGTATATTTTCTGGACTATTTTGCC 57.101 33.333 0.00 0.00 0.00 4.52
3526 3861 8.232913 TGTATATTTTCTGGACTATTTTGCCC 57.767 34.615 0.00 0.00 0.00 5.36
3527 3862 6.731292 ATATTTTCTGGACTATTTTGCCCC 57.269 37.500 0.00 0.00 0.00 5.80
3528 3863 3.825908 TTTCTGGACTATTTTGCCCCT 57.174 42.857 0.00 0.00 0.00 4.79
3529 3864 3.825908 TTCTGGACTATTTTGCCCCTT 57.174 42.857 0.00 0.00 0.00 3.95
3530 3865 4.938575 TTCTGGACTATTTTGCCCCTTA 57.061 40.909 0.00 0.00 0.00 2.69
3531 3866 4.230745 TCTGGACTATTTTGCCCCTTAC 57.769 45.455 0.00 0.00 0.00 2.34
3532 3867 3.589735 TCTGGACTATTTTGCCCCTTACA 59.410 43.478 0.00 0.00 0.00 2.41
3533 3868 4.229582 TCTGGACTATTTTGCCCCTTACAT 59.770 41.667 0.00 0.00 0.00 2.29
3534 3869 4.277476 TGGACTATTTTGCCCCTTACATG 58.723 43.478 0.00 0.00 0.00 3.21
3535 3870 3.068165 GGACTATTTTGCCCCTTACATGC 59.932 47.826 0.00 0.00 0.00 4.06
3536 3871 3.699038 GACTATTTTGCCCCTTACATGCA 59.301 43.478 0.00 0.00 0.00 3.96
3537 3872 4.289245 ACTATTTTGCCCCTTACATGCAT 58.711 39.130 0.00 0.00 34.51 3.96
3538 3873 3.547054 ATTTTGCCCCTTACATGCATG 57.453 42.857 25.09 25.09 34.51 4.06
3539 3874 1.193323 TTTGCCCCTTACATGCATGG 58.807 50.000 29.41 12.51 34.51 3.66
3540 3875 0.687098 TTGCCCCTTACATGCATGGG 60.687 55.000 29.41 21.24 39.37 4.00
3541 3876 1.229927 GCCCCTTACATGCATGGGA 59.770 57.895 29.41 14.99 42.11 4.37
3542 3877 0.825010 GCCCCTTACATGCATGGGAG 60.825 60.000 29.41 23.61 42.11 4.30
3543 3878 0.846015 CCCCTTACATGCATGGGAGA 59.154 55.000 29.41 9.91 42.11 3.71
3544 3879 1.202855 CCCCTTACATGCATGGGAGAG 60.203 57.143 29.41 19.19 42.11 3.20
3545 3880 1.602311 CCTTACATGCATGGGAGAGC 58.398 55.000 29.41 0.00 0.00 4.09
3546 3881 1.602311 CTTACATGCATGGGAGAGCC 58.398 55.000 29.41 0.00 0.00 4.70
3547 3882 0.179048 TTACATGCATGGGAGAGCCG 60.179 55.000 29.41 2.41 33.83 5.52
3548 3883 2.665008 TACATGCATGGGAGAGCCGC 62.665 60.000 29.41 0.00 33.83 6.53
3549 3884 4.923942 ATGCATGGGAGAGCCGCG 62.924 66.667 0.00 0.00 33.83 6.46
3552 3887 3.536917 CATGGGAGAGCCGCGGTA 61.537 66.667 28.70 5.03 33.83 4.02
3553 3888 3.227276 ATGGGAGAGCCGCGGTAG 61.227 66.667 28.70 0.72 33.83 3.18
3554 3889 4.753662 TGGGAGAGCCGCGGTAGT 62.754 66.667 28.70 12.18 33.83 2.73
3555 3890 3.459063 GGGAGAGCCGCGGTAGTT 61.459 66.667 28.70 10.30 33.83 2.24
3556 3891 2.577593 GGAGAGCCGCGGTAGTTT 59.422 61.111 28.70 7.05 0.00 2.66
3557 3892 1.669999 GGGAGAGCCGCGGTAGTTTA 61.670 60.000 28.70 0.00 33.83 2.01
3558 3893 0.174162 GGAGAGCCGCGGTAGTTTAA 59.826 55.000 28.70 0.00 0.00 1.52
3559 3894 1.557651 GAGAGCCGCGGTAGTTTAAG 58.442 55.000 28.70 0.00 0.00 1.85
3560 3895 1.133790 GAGAGCCGCGGTAGTTTAAGA 59.866 52.381 28.70 0.00 0.00 2.10
3561 3896 1.134560 AGAGCCGCGGTAGTTTAAGAG 59.865 52.381 28.70 0.00 0.00 2.85
3562 3897 0.459759 AGCCGCGGTAGTTTAAGAGC 60.460 55.000 28.70 7.28 0.00 4.09
3563 3898 0.738412 GCCGCGGTAGTTTAAGAGCA 60.738 55.000 28.70 0.00 0.00 4.26
3564 3899 1.717194 CCGCGGTAGTTTAAGAGCAA 58.283 50.000 19.50 0.00 0.00 3.91
3565 3900 1.659098 CCGCGGTAGTTTAAGAGCAAG 59.341 52.381 19.50 0.00 0.00 4.01
3566 3901 2.334838 CGCGGTAGTTTAAGAGCAAGT 58.665 47.619 0.00 0.00 0.00 3.16
3567 3902 3.504863 CGCGGTAGTTTAAGAGCAAGTA 58.495 45.455 0.00 0.00 0.00 2.24
3568 3903 4.110482 CGCGGTAGTTTAAGAGCAAGTAT 58.890 43.478 0.00 0.00 0.00 2.12
3569 3904 5.276270 CGCGGTAGTTTAAGAGCAAGTATA 58.724 41.667 0.00 0.00 0.00 1.47
3570 3905 5.745294 CGCGGTAGTTTAAGAGCAAGTATAA 59.255 40.000 0.00 0.00 0.00 0.98
3571 3906 6.420008 CGCGGTAGTTTAAGAGCAAGTATAAT 59.580 38.462 0.00 0.00 0.00 1.28
3572 3907 7.592533 CGCGGTAGTTTAAGAGCAAGTATAATA 59.407 37.037 0.00 0.00 0.00 0.98
3573 3908 8.913656 GCGGTAGTTTAAGAGCAAGTATAATAG 58.086 37.037 0.00 0.00 0.00 1.73
3583 3918 8.526667 AGAGCAAGTATAATAGAACTGAGTCA 57.473 34.615 0.00 0.00 0.00 3.41
3584 3919 8.629158 AGAGCAAGTATAATAGAACTGAGTCAG 58.371 37.037 18.83 18.83 37.52 3.51
3585 3920 7.206687 AGCAAGTATAATAGAACTGAGTCAGC 58.793 38.462 20.31 4.84 34.37 4.26
3586 3921 6.143118 GCAAGTATAATAGAACTGAGTCAGCG 59.857 42.308 20.31 0.00 34.37 5.18
3587 3922 6.320494 AGTATAATAGAACTGAGTCAGCGG 57.680 41.667 20.31 0.00 34.37 5.52
3588 3923 2.969628 AATAGAACTGAGTCAGCGGG 57.030 50.000 20.31 0.00 34.37 6.13
3589 3924 0.461961 ATAGAACTGAGTCAGCGGGC 59.538 55.000 20.31 7.00 34.37 6.13
3590 3925 0.612174 TAGAACTGAGTCAGCGGGCT 60.612 55.000 20.31 13.55 34.37 5.19
3591 3926 0.612174 AGAACTGAGTCAGCGGGCTA 60.612 55.000 20.31 0.00 34.37 3.93
3592 3927 0.461961 GAACTGAGTCAGCGGGCTAT 59.538 55.000 20.31 0.00 34.37 2.97
3593 3928 1.681793 GAACTGAGTCAGCGGGCTATA 59.318 52.381 20.31 0.00 34.37 1.31
3594 3929 1.776662 ACTGAGTCAGCGGGCTATAA 58.223 50.000 20.31 0.00 34.37 0.98
3595 3930 1.683917 ACTGAGTCAGCGGGCTATAAG 59.316 52.381 20.31 0.00 34.37 1.73
3596 3931 1.000283 CTGAGTCAGCGGGCTATAAGG 60.000 57.143 7.33 0.00 0.00 2.69
3597 3932 1.329256 GAGTCAGCGGGCTATAAGGA 58.671 55.000 0.00 0.00 0.00 3.36
3598 3933 1.687123 GAGTCAGCGGGCTATAAGGAA 59.313 52.381 0.00 0.00 0.00 3.36
3599 3934 2.300437 GAGTCAGCGGGCTATAAGGAAT 59.700 50.000 0.00 0.00 0.00 3.01
3600 3935 3.507411 AGTCAGCGGGCTATAAGGAATA 58.493 45.455 0.00 0.00 0.00 1.75
3601 3936 3.901844 AGTCAGCGGGCTATAAGGAATAA 59.098 43.478 0.00 0.00 0.00 1.40
3602 3937 4.347000 AGTCAGCGGGCTATAAGGAATAAA 59.653 41.667 0.00 0.00 0.00 1.40
3603 3938 4.451435 GTCAGCGGGCTATAAGGAATAAAC 59.549 45.833 0.00 0.00 0.00 2.01
3604 3939 4.347000 TCAGCGGGCTATAAGGAATAAACT 59.653 41.667 0.00 0.00 0.00 2.66
3605 3940 5.541101 TCAGCGGGCTATAAGGAATAAACTA 59.459 40.000 0.00 0.00 0.00 2.24
3606 3941 5.869888 CAGCGGGCTATAAGGAATAAACTAG 59.130 44.000 0.00 0.00 0.00 2.57
3607 3942 5.543020 AGCGGGCTATAAGGAATAAACTAGT 59.457 40.000 0.00 0.00 0.00 2.57
3608 3943 6.723052 AGCGGGCTATAAGGAATAAACTAGTA 59.277 38.462 0.00 0.00 0.00 1.82
3609 3944 7.399478 AGCGGGCTATAAGGAATAAACTAGTAT 59.601 37.037 0.00 0.00 0.00 2.12
3610 3945 8.689972 GCGGGCTATAAGGAATAAACTAGTATA 58.310 37.037 0.00 0.00 0.00 1.47
3636 3971 9.862149 ATTTCTACTTAGTTGGAGGAAAAAGAA 57.138 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.225019 GTCAACATCAGCTTCACCACTG 59.775 50.000 0.00 0.00 35.15 3.66
1 2 2.105477 AGTCAACATCAGCTTCACCACT 59.895 45.455 0.00 0.00 0.00 4.00
3 4 2.936919 AGTCAACATCAGCTTCACCA 57.063 45.000 0.00 0.00 0.00 4.17
4 5 5.412594 TCAAATAGTCAACATCAGCTTCACC 59.587 40.000 0.00 0.00 0.00 4.02
5 6 6.148480 ACTCAAATAGTCAACATCAGCTTCAC 59.852 38.462 0.00 0.00 30.33 3.18
6 7 6.233434 ACTCAAATAGTCAACATCAGCTTCA 58.767 36.000 0.00 0.00 30.33 3.02
7 8 6.734104 ACTCAAATAGTCAACATCAGCTTC 57.266 37.500 0.00 0.00 30.33 3.86
74 75 9.114952 TGTCATGAGTCAAACACTTTTGTATTA 57.885 29.630 0.00 0.00 42.51 0.98
75 76 7.995289 TGTCATGAGTCAAACACTTTTGTATT 58.005 30.769 0.00 0.00 42.51 1.89
76 77 7.566760 TGTCATGAGTCAAACACTTTTGTAT 57.433 32.000 0.00 0.00 42.51 2.29
77 78 6.993786 TGTCATGAGTCAAACACTTTTGTA 57.006 33.333 0.00 0.00 42.51 2.41
78 79 5.895636 TGTCATGAGTCAAACACTTTTGT 57.104 34.783 0.00 0.00 42.51 2.83
79 80 7.760131 AAATGTCATGAGTCAAACACTTTTG 57.240 32.000 12.43 0.00 43.17 2.44
82 83 9.683069 GAAATAAATGTCATGAGTCAAACACTT 57.317 29.630 12.43 10.96 34.41 3.16
83 84 9.071276 AGAAATAAATGTCATGAGTCAAACACT 57.929 29.630 12.43 1.31 38.45 3.55
84 85 9.334693 GAGAAATAAATGTCATGAGTCAAACAC 57.665 33.333 12.43 3.78 0.00 3.32
85 86 8.514594 GGAGAAATAAATGTCATGAGTCAAACA 58.485 33.333 12.53 12.53 0.00 2.83
86 87 8.514594 TGGAGAAATAAATGTCATGAGTCAAAC 58.485 33.333 0.00 0.00 0.00 2.93
87 88 8.514594 GTGGAGAAATAAATGTCATGAGTCAAA 58.485 33.333 0.00 0.00 0.00 2.69
88 89 7.665145 TGTGGAGAAATAAATGTCATGAGTCAA 59.335 33.333 0.00 0.00 0.00 3.18
89 90 7.167535 TGTGGAGAAATAAATGTCATGAGTCA 58.832 34.615 0.00 0.00 0.00 3.41
90 91 7.201679 CCTGTGGAGAAATAAATGTCATGAGTC 60.202 40.741 0.00 0.00 0.00 3.36
91 92 6.600822 CCTGTGGAGAAATAAATGTCATGAGT 59.399 38.462 0.00 0.00 0.00 3.41
92 93 6.600822 ACCTGTGGAGAAATAAATGTCATGAG 59.399 38.462 0.00 0.00 0.00 2.90
93 94 6.484288 ACCTGTGGAGAAATAAATGTCATGA 58.516 36.000 0.00 0.00 0.00 3.07
94 95 6.764308 ACCTGTGGAGAAATAAATGTCATG 57.236 37.500 0.00 0.00 0.00 3.07
95 96 8.497745 AGATACCTGTGGAGAAATAAATGTCAT 58.502 33.333 0.00 0.00 0.00 3.06
96 97 7.861629 AGATACCTGTGGAGAAATAAATGTCA 58.138 34.615 0.00 0.00 0.00 3.58
97 98 9.482627 CTAGATACCTGTGGAGAAATAAATGTC 57.517 37.037 0.00 0.00 0.00 3.06
98 99 9.213777 TCTAGATACCTGTGGAGAAATAAATGT 57.786 33.333 0.00 0.00 0.00 2.71
99 100 9.703892 CTCTAGATACCTGTGGAGAAATAAATG 57.296 37.037 0.00 0.00 0.00 2.32
100 101 9.440761 ACTCTAGATACCTGTGGAGAAATAAAT 57.559 33.333 0.00 0.00 0.00 1.40
101 102 8.840200 ACTCTAGATACCTGTGGAGAAATAAA 57.160 34.615 0.00 0.00 0.00 1.40
102 103 8.840200 AACTCTAGATACCTGTGGAGAAATAA 57.160 34.615 0.00 0.00 0.00 1.40
103 104 9.352191 GTAACTCTAGATACCTGTGGAGAAATA 57.648 37.037 0.00 0.00 0.00 1.40
104 105 7.839705 TGTAACTCTAGATACCTGTGGAGAAAT 59.160 37.037 0.00 0.00 0.00 2.17
105 106 7.179966 TGTAACTCTAGATACCTGTGGAGAAA 58.820 38.462 0.00 0.00 0.00 2.52
106 107 6.728411 TGTAACTCTAGATACCTGTGGAGAA 58.272 40.000 0.00 0.00 0.00 2.87
107 108 6.323210 TGTAACTCTAGATACCTGTGGAGA 57.677 41.667 0.00 0.00 0.00 3.71
108 109 7.504238 AGAATGTAACTCTAGATACCTGTGGAG 59.496 40.741 0.00 0.00 0.00 3.86
109 110 7.285629 CAGAATGTAACTCTAGATACCTGTGGA 59.714 40.741 0.00 0.00 0.00 4.02
110 111 7.429633 CAGAATGTAACTCTAGATACCTGTGG 58.570 42.308 0.00 0.00 0.00 4.17
111 112 7.068839 ACCAGAATGTAACTCTAGATACCTGTG 59.931 40.741 0.00 0.00 0.00 3.66
112 113 7.068839 CACCAGAATGTAACTCTAGATACCTGT 59.931 40.741 0.00 0.00 0.00 4.00
113 114 7.429633 CACCAGAATGTAACTCTAGATACCTG 58.570 42.308 0.00 0.00 0.00 4.00
114 115 6.551601 CCACCAGAATGTAACTCTAGATACCT 59.448 42.308 0.00 0.00 0.00 3.08
115 116 6.739008 GCCACCAGAATGTAACTCTAGATACC 60.739 46.154 0.00 0.00 0.00 2.73
116 117 6.041069 AGCCACCAGAATGTAACTCTAGATAC 59.959 42.308 0.00 0.00 0.00 2.24
117 118 6.136857 AGCCACCAGAATGTAACTCTAGATA 58.863 40.000 0.00 0.00 0.00 1.98
118 119 4.965532 AGCCACCAGAATGTAACTCTAGAT 59.034 41.667 0.00 0.00 0.00 1.98
119 120 4.353777 AGCCACCAGAATGTAACTCTAGA 58.646 43.478 0.00 0.00 0.00 2.43
120 121 4.744795 AGCCACCAGAATGTAACTCTAG 57.255 45.455 0.00 0.00 0.00 2.43
121 122 5.955959 TCTTAGCCACCAGAATGTAACTCTA 59.044 40.000 0.00 0.00 0.00 2.43
122 123 4.777896 TCTTAGCCACCAGAATGTAACTCT 59.222 41.667 0.00 0.00 0.00 3.24
123 124 5.086104 TCTTAGCCACCAGAATGTAACTC 57.914 43.478 0.00 0.00 0.00 3.01
124 125 5.431765 CATCTTAGCCACCAGAATGTAACT 58.568 41.667 0.00 0.00 0.00 2.24
125 126 4.035675 GCATCTTAGCCACCAGAATGTAAC 59.964 45.833 0.00 0.00 0.00 2.50
126 127 4.199310 GCATCTTAGCCACCAGAATGTAA 58.801 43.478 0.00 0.00 0.00 2.41
127 128 3.199727 TGCATCTTAGCCACCAGAATGTA 59.800 43.478 0.00 0.00 0.00 2.29
128 129 2.025981 TGCATCTTAGCCACCAGAATGT 60.026 45.455 0.00 0.00 0.00 2.71
129 130 2.646930 TGCATCTTAGCCACCAGAATG 58.353 47.619 0.00 0.00 0.00 2.67
130 131 3.370840 TTGCATCTTAGCCACCAGAAT 57.629 42.857 0.00 0.00 0.00 2.40
131 132 2.877097 TTGCATCTTAGCCACCAGAA 57.123 45.000 0.00 0.00 0.00 3.02
132 133 2.646930 CATTGCATCTTAGCCACCAGA 58.353 47.619 0.00 0.00 0.00 3.86
133 134 1.679680 CCATTGCATCTTAGCCACCAG 59.320 52.381 0.00 0.00 0.00 4.00
134 135 1.766494 CCATTGCATCTTAGCCACCA 58.234 50.000 0.00 0.00 0.00 4.17
135 136 0.386838 GCCATTGCATCTTAGCCACC 59.613 55.000 0.00 0.00 37.47 4.61
136 137 1.396653 AGCCATTGCATCTTAGCCAC 58.603 50.000 0.00 0.00 41.13 5.01
137 138 1.752498 CAAGCCATTGCATCTTAGCCA 59.248 47.619 0.00 0.00 41.13 4.75
138 139 1.753073 ACAAGCCATTGCATCTTAGCC 59.247 47.619 0.00 0.00 40.27 3.93
139 140 3.184541 CAACAAGCCATTGCATCTTAGC 58.815 45.455 0.00 0.00 40.27 3.09
140 141 3.429822 CCCAACAAGCCATTGCATCTTAG 60.430 47.826 0.00 0.00 40.27 2.18
141 142 2.496871 CCCAACAAGCCATTGCATCTTA 59.503 45.455 0.00 0.00 40.27 2.10
142 143 1.276989 CCCAACAAGCCATTGCATCTT 59.723 47.619 0.00 0.00 40.27 2.40
143 144 0.899720 CCCAACAAGCCATTGCATCT 59.100 50.000 0.00 0.00 40.27 2.90
144 145 0.609662 ACCCAACAAGCCATTGCATC 59.390 50.000 0.00 0.00 40.27 3.91
145 146 0.322322 CACCCAACAAGCCATTGCAT 59.678 50.000 0.00 0.00 40.27 3.96
146 147 1.747145 CACCCAACAAGCCATTGCA 59.253 52.632 0.00 0.00 40.27 4.08
147 148 1.668793 GCACCCAACAAGCCATTGC 60.669 57.895 0.00 0.00 40.27 3.56
148 149 1.373246 CGCACCCAACAAGCCATTG 60.373 57.895 0.00 0.00 42.46 2.82
149 150 1.526575 CTCGCACCCAACAAGCCATT 61.527 55.000 0.00 0.00 0.00 3.16
150 151 1.973281 CTCGCACCCAACAAGCCAT 60.973 57.895 0.00 0.00 0.00 4.40
151 152 2.594303 CTCGCACCCAACAAGCCA 60.594 61.111 0.00 0.00 0.00 4.75
152 153 0.887387 TAACTCGCACCCAACAAGCC 60.887 55.000 0.00 0.00 0.00 4.35
153 154 1.165270 ATAACTCGCACCCAACAAGC 58.835 50.000 0.00 0.00 0.00 4.01
154 155 2.161609 GGAATAACTCGCACCCAACAAG 59.838 50.000 0.00 0.00 0.00 3.16
155 156 2.156098 GGAATAACTCGCACCCAACAA 58.844 47.619 0.00 0.00 0.00 2.83
156 157 1.072489 TGGAATAACTCGCACCCAACA 59.928 47.619 0.00 0.00 0.00 3.33
157 158 1.816074 TGGAATAACTCGCACCCAAC 58.184 50.000 0.00 0.00 0.00 3.77
158 159 2.799126 ATGGAATAACTCGCACCCAA 57.201 45.000 0.00 0.00 0.00 4.12
159 160 2.799126 AATGGAATAACTCGCACCCA 57.201 45.000 0.00 0.00 0.00 4.51
160 161 3.013921 TGAAATGGAATAACTCGCACCC 58.986 45.455 0.00 0.00 0.00 4.61
161 162 4.900635 ATGAAATGGAATAACTCGCACC 57.099 40.909 0.00 0.00 0.00 5.01
162 163 5.853282 GCATATGAAATGGAATAACTCGCAC 59.147 40.000 6.97 0.00 0.00 5.34
163 164 5.764686 AGCATATGAAATGGAATAACTCGCA 59.235 36.000 6.97 0.00 0.00 5.10
164 165 6.246420 AGCATATGAAATGGAATAACTCGC 57.754 37.500 6.97 0.00 0.00 5.03
165 166 6.427853 TGGAGCATATGAAATGGAATAACTCG 59.572 38.462 6.97 0.00 0.00 4.18
166 167 7.229306 TGTGGAGCATATGAAATGGAATAACTC 59.771 37.037 6.97 0.00 0.00 3.01
167 168 7.013655 GTGTGGAGCATATGAAATGGAATAACT 59.986 37.037 6.97 0.00 0.00 2.24
168 169 7.141363 GTGTGGAGCATATGAAATGGAATAAC 58.859 38.462 6.97 0.00 0.00 1.89
169 170 6.017192 CGTGTGGAGCATATGAAATGGAATAA 60.017 38.462 6.97 0.00 0.00 1.40
170 171 5.469760 CGTGTGGAGCATATGAAATGGAATA 59.530 40.000 6.97 0.00 0.00 1.75
171 172 4.276678 CGTGTGGAGCATATGAAATGGAAT 59.723 41.667 6.97 0.00 0.00 3.01
172 173 3.627123 CGTGTGGAGCATATGAAATGGAA 59.373 43.478 6.97 0.00 0.00 3.53
173 174 3.205338 CGTGTGGAGCATATGAAATGGA 58.795 45.455 6.97 0.00 0.00 3.41
174 175 2.291465 CCGTGTGGAGCATATGAAATGG 59.709 50.000 6.97 0.00 37.49 3.16
175 176 3.205338 TCCGTGTGGAGCATATGAAATG 58.795 45.455 6.97 0.00 40.17 2.32
176 177 3.558931 TCCGTGTGGAGCATATGAAAT 57.441 42.857 6.97 0.00 40.17 2.17
187 188 3.562141 CACAGTGTTAATTTCCGTGTGGA 59.438 43.478 0.00 0.00 44.61 4.02
188 189 3.304391 CCACAGTGTTAATTTCCGTGTGG 60.304 47.826 4.32 4.32 45.42 4.17
189 190 3.851838 GCCACAGTGTTAATTTCCGTGTG 60.852 47.826 0.00 0.00 34.83 3.82
190 191 2.292292 GCCACAGTGTTAATTTCCGTGT 59.708 45.455 0.00 0.00 0.00 4.49
191 192 2.292016 TGCCACAGTGTTAATTTCCGTG 59.708 45.455 0.00 0.00 0.00 4.94
192 193 2.577700 TGCCACAGTGTTAATTTCCGT 58.422 42.857 0.00 0.00 0.00 4.69
193 194 3.500982 CATGCCACAGTGTTAATTTCCG 58.499 45.455 0.00 0.00 0.00 4.30
194 195 3.253230 GCATGCCACAGTGTTAATTTCC 58.747 45.455 6.36 0.00 0.00 3.13
195 196 3.674753 GTGCATGCCACAGTGTTAATTTC 59.325 43.478 16.68 0.00 44.06 2.17
196 197 3.554752 GGTGCATGCCACAGTGTTAATTT 60.555 43.478 16.68 0.00 46.50 1.82
197 198 2.029110 GGTGCATGCCACAGTGTTAATT 60.029 45.455 16.68 0.00 46.50 1.40
198 199 1.545582 GGTGCATGCCACAGTGTTAAT 59.454 47.619 16.68 0.00 46.50 1.40
199 200 0.958091 GGTGCATGCCACAGTGTTAA 59.042 50.000 16.68 0.00 46.50 2.01
200 201 1.233950 CGGTGCATGCCACAGTGTTA 61.234 55.000 16.68 0.00 46.50 2.41
201 202 2.554636 CGGTGCATGCCACAGTGTT 61.555 57.895 16.68 0.00 46.50 3.32
202 203 2.979676 CGGTGCATGCCACAGTGT 60.980 61.111 16.68 0.00 46.50 3.55
203 204 3.740397 CCGGTGCATGCCACAGTG 61.740 66.667 16.68 7.20 46.50 3.66
204 205 4.269523 ACCGGTGCATGCCACAGT 62.270 61.111 16.68 11.34 46.50 3.55
205 206 3.740397 CACCGGTGCATGCCACAG 61.740 66.667 24.02 13.38 46.50 3.66
206 207 3.565961 ATCACCGGTGCATGCCACA 62.566 57.895 30.25 10.45 46.50 4.17
207 208 1.029408 TAATCACCGGTGCATGCCAC 61.029 55.000 30.25 13.06 43.90 5.01
208 209 0.747644 CTAATCACCGGTGCATGCCA 60.748 55.000 30.25 12.09 0.00 4.92
209 210 0.748005 ACTAATCACCGGTGCATGCC 60.748 55.000 30.25 6.42 0.00 4.40
210 211 1.094785 AACTAATCACCGGTGCATGC 58.905 50.000 30.25 11.82 0.00 4.06
211 212 2.355197 TCAACTAATCACCGGTGCATG 58.645 47.619 30.25 19.90 0.00 4.06
212 213 2.779755 TCAACTAATCACCGGTGCAT 57.220 45.000 30.25 21.67 0.00 3.96
213 214 2.552599 TTCAACTAATCACCGGTGCA 57.447 45.000 30.25 18.56 0.00 4.57
214 215 3.270877 AGATTCAACTAATCACCGGTGC 58.729 45.455 30.25 10.90 45.58 5.01
215 216 4.935205 TGAAGATTCAACTAATCACCGGTG 59.065 41.667 29.26 29.26 45.58 4.94
216 217 5.160607 TGAAGATTCAACTAATCACCGGT 57.839 39.130 0.00 0.00 45.58 5.28
217 218 4.034510 GCTGAAGATTCAACTAATCACCGG 59.965 45.833 0.00 0.00 45.58 5.28
218 219 4.872691 AGCTGAAGATTCAACTAATCACCG 59.127 41.667 0.00 0.00 45.58 4.94
219 220 5.877012 TCAGCTGAAGATTCAACTAATCACC 59.123 40.000 15.67 0.00 45.58 4.02
220 221 6.974932 TCAGCTGAAGATTCAACTAATCAC 57.025 37.500 15.67 0.00 45.58 3.06
221 222 6.765036 GGATCAGCTGAAGATTCAACTAATCA 59.235 38.462 22.50 0.00 45.58 2.57
222 223 6.204495 GGGATCAGCTGAAGATTCAACTAATC 59.796 42.308 22.50 8.51 43.81 1.75
223 224 6.060788 GGGATCAGCTGAAGATTCAACTAAT 58.939 40.000 22.50 0.00 36.64 1.73
224 225 5.045651 TGGGATCAGCTGAAGATTCAACTAA 60.046 40.000 22.50 0.00 36.64 2.24
225 226 4.471025 TGGGATCAGCTGAAGATTCAACTA 59.529 41.667 22.50 0.00 36.64 2.24
226 227 3.265221 TGGGATCAGCTGAAGATTCAACT 59.735 43.478 22.50 0.00 36.64 3.16
227 228 3.614092 TGGGATCAGCTGAAGATTCAAC 58.386 45.455 22.50 10.66 36.64 3.18
228 229 4.165565 AGATGGGATCAGCTGAAGATTCAA 59.834 41.667 22.50 6.34 38.33 2.69
229 230 3.715315 AGATGGGATCAGCTGAAGATTCA 59.285 43.478 22.50 14.62 38.33 2.57
230 231 4.354893 AGATGGGATCAGCTGAAGATTC 57.645 45.455 22.50 13.52 38.33 2.52
231 232 5.901413 TTAGATGGGATCAGCTGAAGATT 57.099 39.130 22.50 3.33 40.22 2.40
232 233 5.546887 TCATTAGATGGGATCAGCTGAAGAT 59.453 40.000 22.50 10.00 40.22 2.40
233 234 4.903649 TCATTAGATGGGATCAGCTGAAGA 59.096 41.667 22.50 5.13 40.22 2.87
234 235 5.224821 TCATTAGATGGGATCAGCTGAAG 57.775 43.478 22.50 0.00 40.22 3.02
235 236 5.635278 TTCATTAGATGGGATCAGCTGAA 57.365 39.130 22.50 4.03 40.22 3.02
236 237 5.072736 ACATTCATTAGATGGGATCAGCTGA 59.927 40.000 20.79 20.79 40.22 4.26
237 238 5.314529 ACATTCATTAGATGGGATCAGCTG 58.685 41.667 7.63 7.63 40.22 4.24
238 239 5.579753 ACATTCATTAGATGGGATCAGCT 57.420 39.130 0.00 0.00 42.84 4.24
239 240 5.766670 TCAACATTCATTAGATGGGATCAGC 59.233 40.000 0.00 0.00 0.00 4.26
240 241 7.283807 TGTTCAACATTCATTAGATGGGATCAG 59.716 37.037 0.00 0.00 0.00 2.90
241 242 7.118060 TGTTCAACATTCATTAGATGGGATCA 58.882 34.615 0.00 0.00 0.00 2.92
242 243 7.572523 TGTTCAACATTCATTAGATGGGATC 57.427 36.000 0.00 0.00 0.00 3.36
243 244 9.293404 CTATGTTCAACATTCATTAGATGGGAT 57.707 33.333 8.69 0.00 39.88 3.85
244 245 8.493607 TCTATGTTCAACATTCATTAGATGGGA 58.506 33.333 8.69 0.00 39.88 4.37
245 246 8.681486 TCTATGTTCAACATTCATTAGATGGG 57.319 34.615 8.69 0.00 39.88 4.00
250 251 8.950961 CGCAATTCTATGTTCAACATTCATTAG 58.049 33.333 8.69 0.00 39.88 1.73
251 252 7.431960 GCGCAATTCTATGTTCAACATTCATTA 59.568 33.333 8.69 0.00 39.88 1.90
252 253 6.254157 GCGCAATTCTATGTTCAACATTCATT 59.746 34.615 8.69 2.35 39.88 2.57
253 254 5.745294 GCGCAATTCTATGTTCAACATTCAT 59.255 36.000 8.69 0.00 39.88 2.57
254 255 5.094812 GCGCAATTCTATGTTCAACATTCA 58.905 37.500 8.69 0.00 39.88 2.57
255 256 4.500477 GGCGCAATTCTATGTTCAACATTC 59.500 41.667 8.69 0.00 39.88 2.67
256 257 4.423732 GGCGCAATTCTATGTTCAACATT 58.576 39.130 8.69 0.00 39.88 2.71
257 258 3.181487 GGGCGCAATTCTATGTTCAACAT 60.181 43.478 10.83 8.41 42.35 2.71
258 259 2.163412 GGGCGCAATTCTATGTTCAACA 59.837 45.455 10.83 0.00 0.00 3.33
259 260 2.163412 TGGGCGCAATTCTATGTTCAAC 59.837 45.455 10.83 0.00 0.00 3.18
260 261 2.441410 TGGGCGCAATTCTATGTTCAA 58.559 42.857 10.83 0.00 0.00 2.69
261 262 2.121291 TGGGCGCAATTCTATGTTCA 57.879 45.000 10.83 0.00 0.00 3.18
262 263 3.119495 ACTTTGGGCGCAATTCTATGTTC 60.119 43.478 17.68 0.00 0.00 3.18
263 264 2.825532 ACTTTGGGCGCAATTCTATGTT 59.174 40.909 17.68 0.00 0.00 2.71
264 265 2.446435 ACTTTGGGCGCAATTCTATGT 58.554 42.857 17.68 6.93 0.00 2.29
265 266 3.548818 GCTACTTTGGGCGCAATTCTATG 60.549 47.826 17.68 7.11 0.00 2.23
266 267 2.618709 GCTACTTTGGGCGCAATTCTAT 59.381 45.455 17.68 4.17 0.00 1.98
267 268 2.014128 GCTACTTTGGGCGCAATTCTA 58.986 47.619 17.68 0.99 0.00 2.10
268 269 0.811281 GCTACTTTGGGCGCAATTCT 59.189 50.000 17.68 5.29 0.00 2.40
269 270 0.179137 GGCTACTTTGGGCGCAATTC 60.179 55.000 17.68 4.98 0.00 2.17
270 271 1.890174 GGCTACTTTGGGCGCAATT 59.110 52.632 17.68 9.92 0.00 2.32
271 272 2.406616 CGGCTACTTTGGGCGCAAT 61.407 57.895 17.68 5.92 44.79 3.56
272 273 3.053291 CGGCTACTTTGGGCGCAA 61.053 61.111 12.81 12.81 44.79 4.85
276 277 1.880894 GTTTCCGGCTACTTTGGGC 59.119 57.895 0.00 0.00 0.00 5.36
277 278 2.168054 CGTTTCCGGCTACTTTGGG 58.832 57.895 0.00 0.00 0.00 4.12
322 323 3.963374 TCTGATTCTGGGTCGATGAATCT 59.037 43.478 21.89 2.63 43.60 2.40
393 394 2.043604 ATTGATGATCCGGCTGCGGA 62.044 55.000 13.89 13.89 42.75 5.54
407 408 1.066143 AGTCGCCGAACCTGAATTGAT 60.066 47.619 0.00 0.00 0.00 2.57
436 437 3.512680 ACTCGATCGATTCAAGAACCAC 58.487 45.455 19.78 0.00 0.00 4.16
507 508 1.494716 GGGAGGGGAAAAGAACGGGA 61.495 60.000 0.00 0.00 0.00 5.14
521 522 3.306613 ACGAGGAGTTATTTAGGGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
544 545 3.873801 GCCTTGGAGTAATTGGAGAGCAA 60.874 47.826 0.00 0.00 0.00 3.91
596 597 9.830975 TCGATCCATGAAGACTAAAATAAATCA 57.169 29.630 0.00 0.00 0.00 2.57
598 599 8.765219 CGTCGATCCATGAAGACTAAAATAAAT 58.235 33.333 0.00 0.00 0.00 1.40
599 600 7.977293 TCGTCGATCCATGAAGACTAAAATAAA 59.023 33.333 0.00 0.00 0.00 1.40
600 601 7.485810 TCGTCGATCCATGAAGACTAAAATAA 58.514 34.615 0.00 0.00 0.00 1.40
601 602 7.034685 TCGTCGATCCATGAAGACTAAAATA 57.965 36.000 0.00 0.00 0.00 1.40
602 603 5.902681 TCGTCGATCCATGAAGACTAAAAT 58.097 37.500 0.00 0.00 0.00 1.82
604 605 4.976224 TCGTCGATCCATGAAGACTAAA 57.024 40.909 0.00 0.00 0.00 1.85
605 606 4.793028 GCATCGTCGATCCATGAAGACTAA 60.793 45.833 4.34 0.00 0.00 2.24
607 608 2.544694 GCATCGTCGATCCATGAAGACT 60.545 50.000 4.34 0.00 0.00 3.24
608 609 1.789464 GCATCGTCGATCCATGAAGAC 59.211 52.381 4.34 0.00 0.00 3.01
609 610 1.408702 TGCATCGTCGATCCATGAAGA 59.591 47.619 4.34 0.00 0.00 2.87
610 611 1.791204 CTGCATCGTCGATCCATGAAG 59.209 52.381 4.34 0.00 0.00 3.02
611 612 1.856802 CTGCATCGTCGATCCATGAA 58.143 50.000 4.34 0.00 0.00 2.57
612 613 0.598419 GCTGCATCGTCGATCCATGA 60.598 55.000 4.34 0.00 0.00 3.07
613 614 1.563435 GGCTGCATCGTCGATCCATG 61.563 60.000 4.34 0.00 0.00 3.66
614 615 1.301244 GGCTGCATCGTCGATCCAT 60.301 57.895 4.34 0.00 0.00 3.41
615 616 2.106938 GGCTGCATCGTCGATCCA 59.893 61.111 4.34 0.90 0.00 3.41
616 617 1.953138 CTGGCTGCATCGTCGATCC 60.953 63.158 4.34 4.25 0.00 3.36
617 618 0.807667 AACTGGCTGCATCGTCGATC 60.808 55.000 4.34 1.48 0.00 3.69
618 619 1.086067 CAACTGGCTGCATCGTCGAT 61.086 55.000 0.75 0.75 0.00 3.59
619 620 1.737735 CAACTGGCTGCATCGTCGA 60.738 57.895 0.50 0.00 0.00 4.20
620 621 2.780643 CAACTGGCTGCATCGTCG 59.219 61.111 0.50 0.00 0.00 5.12
621 622 2.482374 GCAACTGGCTGCATCGTC 59.518 61.111 0.50 0.00 42.17 4.20
658 659 3.819902 GGACCGAGGGAGTACTTATACAG 59.180 52.174 0.00 0.00 33.30 2.74
678 679 3.650950 GCAACTGGCTGGGAGGGA 61.651 66.667 0.00 0.00 40.25 4.20
700 707 2.202987 CTCTGGTCGCTGGATGCC 60.203 66.667 0.00 0.00 38.78 4.40
720 727 4.582869 TCTGAATTTCTACTGCTGCATGT 58.417 39.130 1.31 6.39 0.00 3.21
844 851 4.820173 TGATCATCTGATGAACTGAATGGC 59.180 41.667 22.91 6.27 43.50 4.40
926 933 6.017687 CCATCGCAATCTCTGAATAATGAACA 60.018 38.462 0.00 0.00 0.00 3.18
928 935 5.049198 GCCATCGCAATCTCTGAATAATGAA 60.049 40.000 0.00 0.00 34.03 2.57
1063 1076 2.223203 GCTCGGCAGATTCATCTTGTTG 60.223 50.000 0.00 0.00 34.22 3.33
1102 1115 8.442660 AATACCTCATCTAGAAGGGATTTAGG 57.557 38.462 13.35 6.00 31.29 2.69
1154 1167 0.107459 GGGTCTTGATCCACCAGAGC 60.107 60.000 7.65 5.34 33.91 4.09
1167 1185 1.349688 TGTTTGTATCGCCAGGGTCTT 59.650 47.619 0.00 0.00 0.00 3.01
1168 1186 0.981183 TGTTTGTATCGCCAGGGTCT 59.019 50.000 0.00 0.00 0.00 3.85
1169 1187 2.038387 ATGTTTGTATCGCCAGGGTC 57.962 50.000 0.00 0.00 0.00 4.46
1170 1188 2.091541 CAATGTTTGTATCGCCAGGGT 58.908 47.619 0.00 0.00 0.00 4.34
1171 1189 2.091541 ACAATGTTTGTATCGCCAGGG 58.908 47.619 0.00 0.00 43.27 4.45
1181 1199 8.445275 TGTGTACTTCTTATCACAATGTTTGT 57.555 30.769 0.00 0.00 46.75 2.83
1706 1725 6.588719 AATGCTAAATGTTTGAGGCTTACA 57.411 33.333 0.00 0.00 0.00 2.41
1753 1772 2.544721 AGACACCATGAGACACCATCT 58.455 47.619 0.00 0.00 41.91 2.90
1797 1824 2.223377 GTCCATCCGTCAGAAACAACAC 59.777 50.000 0.00 0.00 0.00 3.32
1822 1849 6.914215 CGTTGATTAATGGATGGTTCTTCATG 59.086 38.462 0.00 0.00 0.00 3.07
1942 1969 2.719739 CCAATCTCATCAGTGGCTTGT 58.280 47.619 0.00 0.00 0.00 3.16
1950 1977 1.213678 TGGAAGGGCCAATCTCATCAG 59.786 52.381 6.18 0.00 45.87 2.90
2152 2179 9.376075 CTTTGAATACTAGATTCAGTGTGTGAT 57.624 33.333 13.64 0.00 38.98 3.06
2270 2299 2.743636 TGGAGTTGCGTCTAAAGAGG 57.256 50.000 0.00 0.00 0.00 3.69
2964 3299 4.169856 AGCCATAATTGAACCCCCATTCTA 59.830 41.667 0.00 0.00 0.00 2.10
2972 3307 4.220602 AGTTTGTGAGCCATAATTGAACCC 59.779 41.667 0.00 0.00 0.00 4.11
3107 3442 0.882484 TCGGCTGTCGTTGCATTCAA 60.882 50.000 0.09 0.00 40.32 2.69
3174 3509 3.039011 GGACCTGAATTGTAGCCCTCTA 58.961 50.000 0.00 0.00 0.00 2.43
3266 3601 1.965414 TCCTCCAAGCTATCCCAACA 58.035 50.000 0.00 0.00 0.00 3.33
3398 3733 9.647918 AGAGAACTATTAGTGACCATAGAATCA 57.352 33.333 6.44 0.00 0.00 2.57
3453 3788 7.148820 GCATTTCTACTTATGCGCAAAGAAAAA 60.149 33.333 27.53 22.78 37.94 1.94
3454 3789 6.307800 GCATTTCTACTTATGCGCAAAGAAAA 59.692 34.615 27.53 23.00 37.94 2.29
3455 3790 5.799936 GCATTTCTACTTATGCGCAAAGAAA 59.200 36.000 27.53 25.84 37.94 2.52
3456 3791 5.331902 GCATTTCTACTTATGCGCAAAGAA 58.668 37.500 27.53 21.16 37.94 2.52
3457 3792 4.908736 GCATTTCTACTTATGCGCAAAGA 58.091 39.130 27.53 17.70 37.94 2.52
3464 3799 4.994852 TGGTATCCGCATTTCTACTTATGC 59.005 41.667 0.00 0.00 42.82 3.14
3465 3800 6.147821 CCTTGGTATCCGCATTTCTACTTATG 59.852 42.308 0.00 0.00 0.00 1.90
3466 3801 6.042781 TCCTTGGTATCCGCATTTCTACTTAT 59.957 38.462 0.00 0.00 0.00 1.73
3467 3802 5.364446 TCCTTGGTATCCGCATTTCTACTTA 59.636 40.000 0.00 0.00 0.00 2.24
3468 3803 4.163458 TCCTTGGTATCCGCATTTCTACTT 59.837 41.667 0.00 0.00 0.00 2.24
3469 3804 3.709653 TCCTTGGTATCCGCATTTCTACT 59.290 43.478 0.00 0.00 0.00 2.57
3470 3805 4.058817 CTCCTTGGTATCCGCATTTCTAC 58.941 47.826 0.00 0.00 0.00 2.59
3471 3806 3.071023 CCTCCTTGGTATCCGCATTTCTA 59.929 47.826 0.00 0.00 0.00 2.10
3472 3807 2.158755 CCTCCTTGGTATCCGCATTTCT 60.159 50.000 0.00 0.00 0.00 2.52
3473 3808 2.222027 CCTCCTTGGTATCCGCATTTC 58.778 52.381 0.00 0.00 0.00 2.17
3474 3809 1.133792 CCCTCCTTGGTATCCGCATTT 60.134 52.381 0.00 0.00 0.00 2.32
3475 3810 0.474184 CCCTCCTTGGTATCCGCATT 59.526 55.000 0.00 0.00 0.00 3.56
3476 3811 0.399949 TCCCTCCTTGGTATCCGCAT 60.400 55.000 0.00 0.00 0.00 4.73
3477 3812 1.002403 TCCCTCCTTGGTATCCGCA 59.998 57.895 0.00 0.00 0.00 5.69
3478 3813 1.049289 AGTCCCTCCTTGGTATCCGC 61.049 60.000 0.00 0.00 0.00 5.54
3479 3814 1.041437 GAGTCCCTCCTTGGTATCCG 58.959 60.000 0.00 0.00 0.00 4.18
3480 3815 1.041437 CGAGTCCCTCCTTGGTATCC 58.959 60.000 0.00 0.00 0.00 2.59
3481 3816 2.068834 TCGAGTCCCTCCTTGGTATC 57.931 55.000 0.00 0.00 0.00 2.24
3482 3817 2.320781 CATCGAGTCCCTCCTTGGTAT 58.679 52.381 0.00 0.00 0.00 2.73
3483 3818 1.006758 ACATCGAGTCCCTCCTTGGTA 59.993 52.381 0.00 0.00 0.00 3.25
3484 3819 0.252284 ACATCGAGTCCCTCCTTGGT 60.252 55.000 0.00 0.00 0.00 3.67
3485 3820 1.776662 TACATCGAGTCCCTCCTTGG 58.223 55.000 0.00 0.00 0.00 3.61
3486 3821 5.730296 AATATACATCGAGTCCCTCCTTG 57.270 43.478 0.00 0.00 0.00 3.61
3487 3822 6.555360 AGAAAATATACATCGAGTCCCTCCTT 59.445 38.462 0.00 0.00 0.00 3.36
3488 3823 6.015010 CAGAAAATATACATCGAGTCCCTCCT 60.015 42.308 0.00 0.00 0.00 3.69
3489 3824 6.159988 CAGAAAATATACATCGAGTCCCTCC 58.840 44.000 0.00 0.00 0.00 4.30
3490 3825 6.015350 TCCAGAAAATATACATCGAGTCCCTC 60.015 42.308 0.00 0.00 0.00 4.30
3491 3826 5.839063 TCCAGAAAATATACATCGAGTCCCT 59.161 40.000 0.00 0.00 0.00 4.20
3492 3827 5.927115 GTCCAGAAAATATACATCGAGTCCC 59.073 44.000 0.00 0.00 0.00 4.46
3493 3828 6.750148 AGTCCAGAAAATATACATCGAGTCC 58.250 40.000 0.00 0.00 0.00 3.85
3494 3829 9.915629 AATAGTCCAGAAAATATACATCGAGTC 57.084 33.333 0.00 0.00 0.00 3.36
3498 3833 9.599322 GCAAAATAGTCCAGAAAATATACATCG 57.401 33.333 0.00 0.00 0.00 3.84
3499 3834 9.899226 GGCAAAATAGTCCAGAAAATATACATC 57.101 33.333 0.00 0.00 0.00 3.06
3500 3835 8.860088 GGGCAAAATAGTCCAGAAAATATACAT 58.140 33.333 0.00 0.00 32.13 2.29
3501 3836 7.286775 GGGGCAAAATAGTCCAGAAAATATACA 59.713 37.037 0.00 0.00 34.02 2.29
3502 3837 7.505923 AGGGGCAAAATAGTCCAGAAAATATAC 59.494 37.037 0.00 0.00 34.02 1.47
3503 3838 7.591821 AGGGGCAAAATAGTCCAGAAAATATA 58.408 34.615 0.00 0.00 34.02 0.86
3504 3839 6.443832 AGGGGCAAAATAGTCCAGAAAATAT 58.556 36.000 0.00 0.00 34.02 1.28
3505 3840 5.837829 AGGGGCAAAATAGTCCAGAAAATA 58.162 37.500 0.00 0.00 34.02 1.40
3506 3841 4.687976 AGGGGCAAAATAGTCCAGAAAAT 58.312 39.130 0.00 0.00 34.02 1.82
3507 3842 4.126520 AGGGGCAAAATAGTCCAGAAAA 57.873 40.909 0.00 0.00 34.02 2.29
3508 3843 3.825908 AGGGGCAAAATAGTCCAGAAA 57.174 42.857 0.00 0.00 34.02 2.52
3509 3844 3.825908 AAGGGGCAAAATAGTCCAGAA 57.174 42.857 0.00 0.00 34.02 3.02
3510 3845 3.589735 TGTAAGGGGCAAAATAGTCCAGA 59.410 43.478 0.00 0.00 34.02 3.86
3511 3846 3.963129 TGTAAGGGGCAAAATAGTCCAG 58.037 45.455 0.00 0.00 34.02 3.86
3512 3847 4.277476 CATGTAAGGGGCAAAATAGTCCA 58.723 43.478 0.00 0.00 34.02 4.02
3513 3848 3.068165 GCATGTAAGGGGCAAAATAGTCC 59.932 47.826 0.00 0.00 0.00 3.85
3514 3849 3.699038 TGCATGTAAGGGGCAAAATAGTC 59.301 43.478 0.00 0.00 34.05 2.59
3515 3850 3.707316 TGCATGTAAGGGGCAAAATAGT 58.293 40.909 0.00 0.00 34.05 2.12
3516 3851 4.501915 CCATGCATGTAAGGGGCAAAATAG 60.502 45.833 24.58 0.22 41.43 1.73
3517 3852 3.387374 CCATGCATGTAAGGGGCAAAATA 59.613 43.478 24.58 0.00 41.43 1.40
3518 3853 2.171027 CCATGCATGTAAGGGGCAAAAT 59.829 45.455 24.58 0.00 41.43 1.82
3519 3854 1.554160 CCATGCATGTAAGGGGCAAAA 59.446 47.619 24.58 0.00 41.43 2.44
3520 3855 1.193323 CCATGCATGTAAGGGGCAAA 58.807 50.000 24.58 0.00 41.43 3.68
3521 3856 0.687098 CCCATGCATGTAAGGGGCAA 60.687 55.000 24.58 0.00 41.43 4.52
3522 3857 1.076118 CCCATGCATGTAAGGGGCA 60.076 57.895 24.58 0.00 42.43 5.36
3523 3858 0.825010 CTCCCATGCATGTAAGGGGC 60.825 60.000 24.58 0.00 41.77 5.80
3524 3859 0.846015 TCTCCCATGCATGTAAGGGG 59.154 55.000 24.58 18.35 41.77 4.79
3525 3860 1.816961 GCTCTCCCATGCATGTAAGGG 60.817 57.143 24.58 17.16 42.86 3.95
3526 3861 1.602311 GCTCTCCCATGCATGTAAGG 58.398 55.000 24.58 18.33 0.00 2.69
3527 3862 1.602311 GGCTCTCCCATGCATGTAAG 58.398 55.000 24.58 19.71 0.00 2.34
3528 3863 0.179048 CGGCTCTCCCATGCATGTAA 60.179 55.000 24.58 11.48 0.00 2.41
3529 3864 1.447217 CGGCTCTCCCATGCATGTA 59.553 57.895 24.58 11.83 0.00 2.29
3530 3865 2.191375 CGGCTCTCCCATGCATGT 59.809 61.111 24.58 0.00 0.00 3.21
3531 3866 3.285215 GCGGCTCTCCCATGCATG 61.285 66.667 20.19 20.19 0.00 4.06
3532 3867 4.923942 CGCGGCTCTCCCATGCAT 62.924 66.667 0.00 0.00 0.00 3.96
3535 3870 3.506059 CTACCGCGGCTCTCCCATG 62.506 68.421 28.58 0.00 0.00 3.66
3536 3871 3.227276 CTACCGCGGCTCTCCCAT 61.227 66.667 28.58 5.26 0.00 4.00
3537 3872 4.753662 ACTACCGCGGCTCTCCCA 62.754 66.667 28.58 0.24 0.00 4.37
3538 3873 1.669999 TAAACTACCGCGGCTCTCCC 61.670 60.000 28.58 0.00 0.00 4.30
3539 3874 0.174162 TTAAACTACCGCGGCTCTCC 59.826 55.000 28.58 0.00 0.00 3.71
3540 3875 1.133790 TCTTAAACTACCGCGGCTCTC 59.866 52.381 28.58 0.00 0.00 3.20
3541 3876 1.134560 CTCTTAAACTACCGCGGCTCT 59.865 52.381 28.58 8.89 0.00 4.09
3542 3877 1.557651 CTCTTAAACTACCGCGGCTC 58.442 55.000 28.58 0.00 0.00 4.70
3543 3878 0.459759 GCTCTTAAACTACCGCGGCT 60.460 55.000 28.58 15.49 0.00 5.52
3544 3879 0.738412 TGCTCTTAAACTACCGCGGC 60.738 55.000 28.58 6.86 0.00 6.53
3545 3880 1.659098 CTTGCTCTTAAACTACCGCGG 59.341 52.381 26.86 26.86 0.00 6.46
3546 3881 2.334838 ACTTGCTCTTAAACTACCGCG 58.665 47.619 0.00 0.00 0.00 6.46
3547 3882 7.710766 ATTATACTTGCTCTTAAACTACCGC 57.289 36.000 0.00 0.00 0.00 5.68
3557 3892 8.972127 TGACTCAGTTCTATTATACTTGCTCTT 58.028 33.333 0.00 0.00 0.00 2.85
3558 3893 8.526667 TGACTCAGTTCTATTATACTTGCTCT 57.473 34.615 0.00 0.00 0.00 4.09
3559 3894 7.381139 GCTGACTCAGTTCTATTATACTTGCTC 59.619 40.741 7.89 0.00 33.43 4.26
3560 3895 7.206687 GCTGACTCAGTTCTATTATACTTGCT 58.793 38.462 7.89 0.00 33.43 3.91
3561 3896 6.143118 CGCTGACTCAGTTCTATTATACTTGC 59.857 42.308 7.89 0.00 33.43 4.01
3562 3897 6.638873 CCGCTGACTCAGTTCTATTATACTTG 59.361 42.308 7.89 0.00 33.43 3.16
3563 3898 6.239064 CCCGCTGACTCAGTTCTATTATACTT 60.239 42.308 7.89 0.00 33.43 2.24
3564 3899 5.241949 CCCGCTGACTCAGTTCTATTATACT 59.758 44.000 7.89 0.00 33.43 2.12
3565 3900 5.462405 CCCGCTGACTCAGTTCTATTATAC 58.538 45.833 7.89 0.00 33.43 1.47
3566 3901 4.022242 GCCCGCTGACTCAGTTCTATTATA 60.022 45.833 7.89 0.00 33.43 0.98
3567 3902 3.243907 GCCCGCTGACTCAGTTCTATTAT 60.244 47.826 7.89 0.00 33.43 1.28
3568 3903 2.100916 GCCCGCTGACTCAGTTCTATTA 59.899 50.000 7.89 0.00 33.43 0.98
3569 3904 1.134670 GCCCGCTGACTCAGTTCTATT 60.135 52.381 7.89 0.00 33.43 1.73
3570 3905 0.461961 GCCCGCTGACTCAGTTCTAT 59.538 55.000 7.89 0.00 33.43 1.98
3571 3906 0.612174 AGCCCGCTGACTCAGTTCTA 60.612 55.000 7.89 0.00 33.43 2.10
3572 3907 0.612174 TAGCCCGCTGACTCAGTTCT 60.612 55.000 7.89 3.18 33.43 3.01
3573 3908 0.461961 ATAGCCCGCTGACTCAGTTC 59.538 55.000 7.89 0.00 33.43 3.01
3574 3909 1.776662 TATAGCCCGCTGACTCAGTT 58.223 50.000 7.89 0.00 33.43 3.16
3575 3910 1.683917 CTTATAGCCCGCTGACTCAGT 59.316 52.381 7.89 0.00 33.43 3.41
3576 3911 1.000283 CCTTATAGCCCGCTGACTCAG 60.000 57.143 1.21 1.21 34.12 3.35
3577 3912 1.040646 CCTTATAGCCCGCTGACTCA 58.959 55.000 0.00 0.00 0.00 3.41
3578 3913 1.329256 TCCTTATAGCCCGCTGACTC 58.671 55.000 0.00 0.00 0.00 3.36
3579 3914 1.789523 TTCCTTATAGCCCGCTGACT 58.210 50.000 0.00 0.00 0.00 3.41
3580 3915 2.841442 ATTCCTTATAGCCCGCTGAC 57.159 50.000 0.00 0.00 0.00 3.51
3581 3916 4.347000 AGTTTATTCCTTATAGCCCGCTGA 59.653 41.667 0.00 0.00 0.00 4.26
3582 3917 4.642429 AGTTTATTCCTTATAGCCCGCTG 58.358 43.478 0.00 0.00 0.00 5.18
3583 3918 4.976540 AGTTTATTCCTTATAGCCCGCT 57.023 40.909 0.00 0.00 0.00 5.52
3584 3919 5.791666 ACTAGTTTATTCCTTATAGCCCGC 58.208 41.667 0.00 0.00 0.00 6.13
3610 3945 9.862149 TTCTTTTTCCTCCAACTAAGTAGAAAT 57.138 29.630 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.