Multiple sequence alignment - TraesCS6D01G068300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G068300 | chr6D | 100.000 | 5817 | 0 | 0 | 1 | 5817 | 34337461 | 34343277 | 0.000000e+00 | 10743 |
1 | TraesCS6D01G068300 | chr6D | 92.991 | 214 | 13 | 2 | 394 | 605 | 87389542 | 87389329 | 1.570000e-80 | 311 |
2 | TraesCS6D01G068300 | chr6B | 91.408 | 3026 | 141 | 53 | 2488 | 5460 | 71036033 | 71038992 | 0.000000e+00 | 4037 |
3 | TraesCS6D01G068300 | chr6B | 89.864 | 1105 | 82 | 14 | 1390 | 2488 | 71034983 | 71036063 | 0.000000e+00 | 1393 |
4 | TraesCS6D01G068300 | chr6B | 97.471 | 514 | 10 | 1 | 823 | 1333 | 71034335 | 71034848 | 0.000000e+00 | 874 |
5 | TraesCS6D01G068300 | chr6B | 85.666 | 293 | 18 | 12 | 5524 | 5815 | 71039501 | 71039770 | 2.650000e-73 | 287 |
6 | TraesCS6D01G068300 | chr6B | 94.505 | 91 | 5 | 0 | 656 | 746 | 704956480 | 704956570 | 2.190000e-29 | 141 |
7 | TraesCS6D01G068300 | chr6A | 91.347 | 2681 | 122 | 45 | 2489 | 5123 | 38468205 | 38470821 | 0.000000e+00 | 3565 |
8 | TraesCS6D01G068300 | chr6A | 90.372 | 1101 | 79 | 10 | 1398 | 2488 | 38467151 | 38468234 | 0.000000e+00 | 1421 |
9 | TraesCS6D01G068300 | chr6A | 96.875 | 512 | 14 | 2 | 823 | 1333 | 38466496 | 38467006 | 0.000000e+00 | 856 |
10 | TraesCS6D01G068300 | chr6A | 90.855 | 339 | 23 | 6 | 5128 | 5460 | 38471239 | 38471575 | 1.150000e-121 | 448 |
11 | TraesCS6D01G068300 | chr6A | 93.396 | 212 | 13 | 1 | 395 | 605 | 465626641 | 465626430 | 4.380000e-81 | 313 |
12 | TraesCS6D01G068300 | chr6A | 86.102 | 295 | 15 | 14 | 5524 | 5817 | 38472021 | 38472290 | 1.590000e-75 | 294 |
13 | TraesCS6D01G068300 | chr2B | 89.873 | 395 | 39 | 1 | 1 | 395 | 646950826 | 646951219 | 1.870000e-139 | 507 |
14 | TraesCS6D01G068300 | chr2B | 89.367 | 395 | 41 | 1 | 1 | 395 | 181353733 | 181354126 | 4.050000e-136 | 496 |
15 | TraesCS6D01G068300 | chr2B | 88.101 | 395 | 42 | 4 | 1 | 395 | 195594785 | 195595174 | 1.140000e-126 | 464 |
16 | TraesCS6D01G068300 | chr7A | 89.552 | 402 | 32 | 3 | 1 | 395 | 571708858 | 571709256 | 8.700000e-138 | 501 |
17 | TraesCS6D01G068300 | chr7A | 89.863 | 365 | 33 | 3 | 32 | 395 | 571710549 | 571710910 | 3.170000e-127 | 466 |
18 | TraesCS6D01G068300 | chr7A | 90.870 | 230 | 18 | 3 | 382 | 610 | 671487469 | 671487696 | 7.320000e-79 | 305 |
19 | TraesCS6D01G068300 | chr3B | 89.086 | 394 | 42 | 1 | 2 | 395 | 794572045 | 794572437 | 6.770000e-134 | 488 |
20 | TraesCS6D01G068300 | chr3B | 82.635 | 167 | 13 | 1 | 596 | 746 | 263271171 | 263271005 | 3.660000e-27 | 134 |
21 | TraesCS6D01G068300 | chr1A | 89.362 | 376 | 38 | 2 | 1 | 375 | 542712595 | 542712969 | 6.820000e-129 | 472 |
22 | TraesCS6D01G068300 | chr2A | 87.901 | 405 | 41 | 7 | 2 | 401 | 711861047 | 711860646 | 2.450000e-128 | 470 |
23 | TraesCS6D01G068300 | chr2A | 93.868 | 212 | 11 | 2 | 395 | 604 | 561298754 | 561298965 | 9.410000e-83 | 318 |
24 | TraesCS6D01G068300 | chr2A | 86.531 | 245 | 23 | 7 | 362 | 603 | 756928015 | 756928252 | 1.610000e-65 | 261 |
25 | TraesCS6D01G068300 | chr1D | 87.313 | 402 | 41 | 6 | 2 | 401 | 370914846 | 370914453 | 8.890000e-123 | 451 |
26 | TraesCS6D01G068300 | chr4D | 94.811 | 212 | 10 | 1 | 395 | 605 | 439770757 | 439770546 | 4.350000e-86 | 329 |
27 | TraesCS6D01G068300 | chr7D | 93.119 | 218 | 13 | 2 | 392 | 608 | 373582252 | 373582468 | 9.410000e-83 | 318 |
28 | TraesCS6D01G068300 | chr7D | 91.928 | 223 | 15 | 2 | 386 | 605 | 306456225 | 306456447 | 5.660000e-80 | 309 |
29 | TraesCS6D01G068300 | chr7D | 86.614 | 127 | 12 | 2 | 624 | 745 | 560755600 | 560755726 | 1.020000e-27 | 135 |
30 | TraesCS6D01G068300 | chr3A | 92.070 | 227 | 16 | 2 | 380 | 605 | 621317496 | 621317721 | 9.410000e-83 | 318 |
31 | TraesCS6D01G068300 | chr3A | 89.091 | 110 | 8 | 1 | 622 | 731 | 656109152 | 656109047 | 3.660000e-27 | 134 |
32 | TraesCS6D01G068300 | chr5A | 91.556 | 225 | 18 | 1 | 382 | 605 | 44284878 | 44285102 | 5.660000e-80 | 309 |
33 | TraesCS6D01G068300 | chr7B | 85.161 | 155 | 11 | 6 | 600 | 743 | 85624326 | 85624479 | 1.310000e-31 | 148 |
34 | TraesCS6D01G068300 | chr7B | 81.548 | 168 | 14 | 2 | 595 | 746 | 20046718 | 20046884 | 7.920000e-24 | 122 |
35 | TraesCS6D01G068300 | chr3D | 87.692 | 130 | 12 | 1 | 602 | 731 | 520722840 | 520722715 | 1.310000e-31 | 148 |
36 | TraesCS6D01G068300 | chrUn | 84.277 | 159 | 10 | 6 | 603 | 746 | 100780123 | 100779965 | 2.190000e-29 | 141 |
37 | TraesCS6D01G068300 | chrUn | 82.432 | 148 | 22 | 2 | 602 | 746 | 100229728 | 100229582 | 6.120000e-25 | 126 |
38 | TraesCS6D01G068300 | chr4B | 84.028 | 144 | 21 | 1 | 603 | 746 | 10562717 | 10562576 | 2.830000e-28 | 137 |
39 | TraesCS6D01G068300 | chr2D | 84.138 | 145 | 18 | 4 | 603 | 742 | 372321100 | 372320956 | 1.020000e-27 | 135 |
40 | TraesCS6D01G068300 | chr1B | 79.558 | 181 | 16 | 6 | 584 | 746 | 488538920 | 488539097 | 6.160000e-20 | 110 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G068300 | chr6D | 34337461 | 34343277 | 5816 | False | 10743.00 | 10743 | 100.00000 | 1 | 5817 | 1 | chr6D.!!$F1 | 5816 |
1 | TraesCS6D01G068300 | chr6B | 71034335 | 71039770 | 5435 | False | 1647.75 | 4037 | 91.10225 | 823 | 5815 | 4 | chr6B.!!$F2 | 4992 |
2 | TraesCS6D01G068300 | chr6A | 38466496 | 38472290 | 5794 | False | 1316.80 | 3565 | 91.11020 | 823 | 5817 | 5 | chr6A.!!$F1 | 4994 |
3 | TraesCS6D01G068300 | chr7A | 571708858 | 571710910 | 2052 | False | 483.50 | 501 | 89.70750 | 1 | 395 | 2 | chr7A.!!$F2 | 394 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
753 | 761 | 0.107654 | GAACGGAGGGAGGTTGGATG | 60.108 | 60.0 | 0.00 | 0.00 | 0.00 | 3.51 | F |
772 | 780 | 0.112412 | GAAGGGCTGGTGGGAAGAAA | 59.888 | 55.0 | 0.00 | 0.00 | 0.00 | 2.52 | F |
774 | 782 | 0.113190 | AGGGCTGGTGGGAAGAAAAG | 59.887 | 55.0 | 0.00 | 0.00 | 0.00 | 2.27 | F |
775 | 783 | 0.178961 | GGGCTGGTGGGAAGAAAAGT | 60.179 | 55.0 | 0.00 | 0.00 | 0.00 | 2.66 | F |
1347 | 1359 | 0.250770 | AAGGTGACCGAGGGCTTTTC | 60.251 | 55.0 | 0.00 | 0.00 | 0.00 | 2.29 | F |
1927 | 2022 | 1.117150 | CTGGCCTGGCTGCAATATTT | 58.883 | 50.0 | 19.68 | 0.00 | 0.00 | 1.40 | F |
2421 | 2524 | 1.495878 | CTACCATGCGCATCTCTCAC | 58.504 | 55.0 | 22.51 | 0.00 | 0.00 | 3.51 | F |
3647 | 3785 | 0.387239 | AAAGAAAGCGATGTTGCGGC | 60.387 | 50.0 | 0.00 | 0.00 | 40.67 | 6.53 | F |
3650 | 3788 | 0.662970 | GAAAGCGATGTTGCGGCAAA | 60.663 | 50.0 | 18.23 | 8.41 | 40.67 | 3.68 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2688 | 2795 | 0.837691 | TCCAAGAGCCTGCAGAGGAA | 60.838 | 55.000 | 17.39 | 0.0 | 42.93 | 3.36 | R |
2767 | 2887 | 2.431057 | AGTAGCCCCATGACGTTTAGAG | 59.569 | 50.000 | 0.00 | 0.0 | 0.00 | 2.43 | R |
2937 | 3060 | 9.658475 | CACGTCTTTCAAAAGTAAAATATGTCA | 57.342 | 29.630 | 2.63 | 0.0 | 37.31 | 3.58 | R |
2959 | 3086 | 5.106317 | ACAAATGAGTGTTTCACTTTCACGT | 60.106 | 36.000 | 3.91 | 0.0 | 45.44 | 4.49 | R |
3126 | 3253 | 2.997303 | GTTTTTCAAAAACGCCCAGTGT | 59.003 | 40.909 | 9.95 | 0.0 | 0.00 | 3.55 | R |
3642 | 3780 | 2.025155 | TGGTTTTAAGTCTTTGCCGCA | 58.975 | 42.857 | 0.00 | 0.0 | 0.00 | 5.69 | R |
4478 | 5520 | 2.363683 | GGAGCTGAATGAGGAACTTGG | 58.636 | 52.381 | 0.00 | 0.0 | 41.55 | 3.61 | R |
4666 | 5708 | 0.535780 | CAGAGGTGCCTGCTTTGTGA | 60.536 | 55.000 | 0.00 | 0.0 | 0.00 | 3.58 | R |
5732 | 7672 | 0.973632 | CCTAAACCCCAACTTTGCCC | 59.026 | 55.000 | 0.00 | 0.0 | 0.00 | 5.36 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 1.565305 | GATCTCATCTCGTGTGGTGC | 58.435 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
33 | 34 | 0.453793 | TGTGGTGCCGTCTTTGTTTG | 59.546 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
34 | 35 | 0.248866 | GTGGTGCCGTCTTTGTTTGG | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
35 | 36 | 1.362355 | GGTGCCGTCTTTGTTTGGG | 59.638 | 57.895 | 0.00 | 0.00 | 0.00 | 4.12 |
36 | 37 | 1.362355 | GTGCCGTCTTTGTTTGGGG | 59.638 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
37 | 38 | 1.830408 | TGCCGTCTTTGTTTGGGGG | 60.830 | 57.895 | 0.00 | 0.00 | 0.00 | 5.40 |
38 | 39 | 1.529713 | GCCGTCTTTGTTTGGGGGA | 60.530 | 57.895 | 0.00 | 0.00 | 0.00 | 4.81 |
39 | 40 | 1.110518 | GCCGTCTTTGTTTGGGGGAA | 61.111 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
41 | 42 | 1.477923 | CCGTCTTTGTTTGGGGGAAGA | 60.478 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
42 | 43 | 2.514803 | CGTCTTTGTTTGGGGGAAGAT | 58.485 | 47.619 | 0.00 | 0.00 | 31.52 | 2.40 |
56 | 64 | 3.348119 | GGGAAGATGAAGGTCCAAGAAC | 58.652 | 50.000 | 0.00 | 0.00 | 32.70 | 3.01 |
86 | 94 | 1.152777 | CTTGTGGGTGGCAGTTCCA | 60.153 | 57.895 | 0.00 | 0.00 | 44.18 | 3.53 |
99 | 107 | 2.023673 | CAGTTCCAGTGTTTTGCCTCA | 58.976 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
130 | 138 | 2.281345 | CATGGAGCGGATCTGGGC | 60.281 | 66.667 | 3.14 | 0.00 | 0.00 | 5.36 |
144 | 152 | 2.747855 | GGGCTTTGAGGAGCACGG | 60.748 | 66.667 | 0.00 | 0.00 | 44.49 | 4.94 |
173 | 181 | 4.147322 | GGTCGATGCGCCACAACG | 62.147 | 66.667 | 4.18 | 3.60 | 45.14 | 4.10 |
180 | 188 | 1.233950 | ATGCGCCACAACGACAATGA | 61.234 | 50.000 | 4.18 | 0.00 | 34.06 | 2.57 |
187 | 195 | 0.951558 | ACAACGACAATGACCTTGCC | 59.048 | 50.000 | 0.00 | 0.00 | 38.50 | 4.52 |
191 | 199 | 3.039202 | GACAATGACCTTGCCGGCG | 62.039 | 63.158 | 23.90 | 10.49 | 38.50 | 6.46 |
207 | 215 | 2.268076 | GCGGCAGGCCTTTTCTTCA | 61.268 | 57.895 | 0.00 | 0.00 | 34.80 | 3.02 |
244 | 252 | 0.953471 | TGGGCGATGGTGTTTCTTCG | 60.953 | 55.000 | 0.00 | 0.00 | 37.37 | 3.79 |
245 | 253 | 0.953960 | GGGCGATGGTGTTTCTTCGT | 60.954 | 55.000 | 0.00 | 0.00 | 36.89 | 3.85 |
250 | 258 | 1.993370 | GATGGTGTTTCTTCGTCTCCG | 59.007 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
320 | 328 | 6.042143 | TGGAGTTTTCTTGCAAATGTTTCTC | 58.958 | 36.000 | 0.00 | 4.84 | 0.00 | 2.87 |
340 | 348 | 4.039245 | TCTCGACATGTGTCCTCTCTTTTT | 59.961 | 41.667 | 1.15 | 0.00 | 41.86 | 1.94 |
401 | 409 | 8.997621 | TGACATCTGTTTAATGGTACTAGAAC | 57.002 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
402 | 410 | 8.590204 | TGACATCTGTTTAATGGTACTAGAACA | 58.410 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
403 | 411 | 9.431887 | GACATCTGTTTAATGGTACTAGAACAA | 57.568 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
404 | 412 | 9.959721 | ACATCTGTTTAATGGTACTAGAACAAT | 57.040 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
406 | 414 | 8.263940 | TCTGTTTAATGGTACTAGAACAATGC | 57.736 | 34.615 | 0.00 | 0.00 | 0.00 | 3.56 |
407 | 415 | 7.335924 | TCTGTTTAATGGTACTAGAACAATGCC | 59.664 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
408 | 416 | 6.376018 | TGTTTAATGGTACTAGAACAATGCCC | 59.624 | 38.462 | 0.00 | 0.00 | 0.00 | 5.36 |
409 | 417 | 2.684001 | TGGTACTAGAACAATGCCCG | 57.316 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
410 | 418 | 1.903860 | TGGTACTAGAACAATGCCCGT | 59.096 | 47.619 | 0.00 | 0.00 | 0.00 | 5.28 |
411 | 419 | 2.277084 | GGTACTAGAACAATGCCCGTG | 58.723 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
412 | 420 | 1.664151 | GTACTAGAACAATGCCCGTGC | 59.336 | 52.381 | 0.00 | 0.00 | 38.26 | 5.34 |
413 | 421 | 1.019278 | ACTAGAACAATGCCCGTGCG | 61.019 | 55.000 | 0.00 | 0.00 | 41.78 | 5.34 |
414 | 422 | 1.004320 | TAGAACAATGCCCGTGCGT | 60.004 | 52.632 | 0.00 | 0.00 | 41.78 | 5.24 |
419 | 427 | 3.600694 | AATGCCCGTGCGTTGCAA | 61.601 | 55.556 | 0.00 | 0.00 | 44.90 | 4.08 |
420 | 428 | 3.839642 | AATGCCCGTGCGTTGCAAC | 62.840 | 57.895 | 19.89 | 19.89 | 44.90 | 4.17 |
439 | 447 | 9.216117 | GTTGCAACGGGATATAAATATTCTAGT | 57.784 | 33.333 | 14.90 | 0.00 | 0.00 | 2.57 |
458 | 466 | 8.767478 | TTCTAGTATGTTAGCTTGTGGTTTAC | 57.233 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
459 | 467 | 7.325694 | TCTAGTATGTTAGCTTGTGGTTTACC | 58.674 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
460 | 468 | 6.123045 | AGTATGTTAGCTTGTGGTTTACCT | 57.877 | 37.500 | 0.00 | 0.00 | 36.82 | 3.08 |
461 | 469 | 7.248743 | AGTATGTTAGCTTGTGGTTTACCTA | 57.751 | 36.000 | 0.00 | 0.00 | 36.82 | 3.08 |
462 | 470 | 7.858498 | AGTATGTTAGCTTGTGGTTTACCTAT | 58.142 | 34.615 | 0.00 | 0.00 | 36.82 | 2.57 |
463 | 471 | 7.985752 | AGTATGTTAGCTTGTGGTTTACCTATC | 59.014 | 37.037 | 0.00 | 0.00 | 36.82 | 2.08 |
464 | 472 | 6.116711 | TGTTAGCTTGTGGTTTACCTATCA | 57.883 | 37.500 | 0.00 | 0.00 | 36.82 | 2.15 |
465 | 473 | 6.535540 | TGTTAGCTTGTGGTTTACCTATCAA | 58.464 | 36.000 | 0.00 | 3.32 | 36.82 | 2.57 |
466 | 474 | 7.172342 | TGTTAGCTTGTGGTTTACCTATCAAT | 58.828 | 34.615 | 0.00 | 0.00 | 36.82 | 2.57 |
467 | 475 | 8.322828 | TGTTAGCTTGTGGTTTACCTATCAATA | 58.677 | 33.333 | 0.00 | 0.00 | 36.82 | 1.90 |
468 | 476 | 9.169592 | GTTAGCTTGTGGTTTACCTATCAATAA | 57.830 | 33.333 | 0.00 | 0.00 | 36.82 | 1.40 |
469 | 477 | 9.914834 | TTAGCTTGTGGTTTACCTATCAATAAT | 57.085 | 29.630 | 0.00 | 0.00 | 36.82 | 1.28 |
471 | 479 | 9.914834 | AGCTTGTGGTTTACCTATCAATAATAA | 57.085 | 29.630 | 0.00 | 0.00 | 36.82 | 1.40 |
475 | 483 | 8.779303 | TGTGGTTTACCTATCAATAATAATGCG | 58.221 | 33.333 | 0.00 | 0.00 | 36.82 | 4.73 |
476 | 484 | 8.995220 | GTGGTTTACCTATCAATAATAATGCGA | 58.005 | 33.333 | 0.00 | 0.00 | 36.82 | 5.10 |
477 | 485 | 9.733556 | TGGTTTACCTATCAATAATAATGCGAT | 57.266 | 29.630 | 0.00 | 0.00 | 36.82 | 4.58 |
498 | 506 | 9.631452 | TGCGATTTTGTAAATAAATGTTCATCA | 57.369 | 25.926 | 0.00 | 0.00 | 0.00 | 3.07 |
509 | 517 | 8.915871 | AATAAATGTTCATCAAATTCTGACCG | 57.084 | 30.769 | 0.00 | 0.00 | 36.69 | 4.79 |
510 | 518 | 5.964958 | AATGTTCATCAAATTCTGACCGT | 57.035 | 34.783 | 0.00 | 0.00 | 36.69 | 4.83 |
511 | 519 | 4.747540 | TGTTCATCAAATTCTGACCGTG | 57.252 | 40.909 | 0.00 | 0.00 | 36.69 | 4.94 |
512 | 520 | 4.384940 | TGTTCATCAAATTCTGACCGTGA | 58.615 | 39.130 | 0.00 | 0.00 | 36.69 | 4.35 |
513 | 521 | 4.819088 | TGTTCATCAAATTCTGACCGTGAA | 59.181 | 37.500 | 0.00 | 0.00 | 36.69 | 3.18 |
514 | 522 | 5.473162 | TGTTCATCAAATTCTGACCGTGAAT | 59.527 | 36.000 | 0.00 | 0.00 | 34.60 | 2.57 |
515 | 523 | 6.016360 | TGTTCATCAAATTCTGACCGTGAATT | 60.016 | 34.615 | 0.00 | 0.00 | 43.44 | 2.17 |
516 | 524 | 7.174080 | TGTTCATCAAATTCTGACCGTGAATTA | 59.826 | 33.333 | 0.00 | 0.00 | 41.54 | 1.40 |
517 | 525 | 7.072177 | TCATCAAATTCTGACCGTGAATTAC | 57.928 | 36.000 | 0.00 | 0.00 | 41.54 | 1.89 |
518 | 526 | 5.873179 | TCAAATTCTGACCGTGAATTACC | 57.127 | 39.130 | 0.00 | 0.00 | 41.54 | 2.85 |
519 | 527 | 5.556915 | TCAAATTCTGACCGTGAATTACCT | 58.443 | 37.500 | 0.00 | 0.00 | 41.54 | 3.08 |
520 | 528 | 6.001460 | TCAAATTCTGACCGTGAATTACCTT | 58.999 | 36.000 | 0.00 | 0.00 | 41.54 | 3.50 |
521 | 529 | 7.162761 | TCAAATTCTGACCGTGAATTACCTTA | 58.837 | 34.615 | 0.00 | 0.00 | 41.54 | 2.69 |
522 | 530 | 7.827236 | TCAAATTCTGACCGTGAATTACCTTAT | 59.173 | 33.333 | 0.00 | 0.00 | 41.54 | 1.73 |
523 | 531 | 9.104965 | CAAATTCTGACCGTGAATTACCTTATA | 57.895 | 33.333 | 0.00 | 0.00 | 41.54 | 0.98 |
524 | 532 | 9.847224 | AAATTCTGACCGTGAATTACCTTATAT | 57.153 | 29.630 | 0.00 | 0.00 | 41.54 | 0.86 |
525 | 533 | 9.847224 | AATTCTGACCGTGAATTACCTTATATT | 57.153 | 29.630 | 0.00 | 0.00 | 40.88 | 1.28 |
526 | 534 | 9.847224 | ATTCTGACCGTGAATTACCTTATATTT | 57.153 | 29.630 | 0.00 | 0.00 | 30.84 | 1.40 |
527 | 535 | 9.675464 | TTCTGACCGTGAATTACCTTATATTTT | 57.325 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
528 | 536 | 9.104965 | TCTGACCGTGAATTACCTTATATTTTG | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
529 | 537 | 9.104965 | CTGACCGTGAATTACCTTATATTTTGA | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
530 | 538 | 9.621629 | TGACCGTGAATTACCTTATATTTTGAT | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
581 | 589 | 8.934023 | TGAAATTGGTTCAGAAGGTAAGTAAT | 57.066 | 30.769 | 0.00 | 0.00 | 41.47 | 1.89 |
582 | 590 | 9.362151 | TGAAATTGGTTCAGAAGGTAAGTAATT | 57.638 | 29.630 | 0.00 | 0.00 | 41.47 | 1.40 |
629 | 637 | 9.047947 | ACTCCCTGTGTTTCTAAATATAAGTCT | 57.952 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
630 | 638 | 9.892130 | CTCCCTGTGTTTCTAAATATAAGTCTT | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
649 | 657 | 7.118496 | AGTCTTTGTAGAGATTCCACTATGG | 57.882 | 40.000 | 0.00 | 0.00 | 39.43 | 2.74 |
650 | 658 | 6.897966 | AGTCTTTGTAGAGATTCCACTATGGA | 59.102 | 38.462 | 0.00 | 0.00 | 46.61 | 3.41 |
664 | 672 | 7.526142 | TCCACTATGGACTACATGAATCTAC | 57.474 | 40.000 | 0.00 | 0.00 | 42.67 | 2.59 |
665 | 673 | 7.066781 | TCCACTATGGACTACATGAATCTACA | 58.933 | 38.462 | 0.00 | 0.00 | 42.67 | 2.74 |
666 | 674 | 7.730332 | TCCACTATGGACTACATGAATCTACAT | 59.270 | 37.037 | 0.00 | 0.00 | 42.67 | 2.29 |
667 | 675 | 8.370940 | CCACTATGGACTACATGAATCTACATT | 58.629 | 37.037 | 0.00 | 0.00 | 40.96 | 2.71 |
668 | 676 | 9.416794 | CACTATGGACTACATGAATCTACATTC | 57.583 | 37.037 | 0.00 | 0.00 | 40.82 | 2.67 |
669 | 677 | 9.373450 | ACTATGGACTACATGAATCTACATTCT | 57.627 | 33.333 | 0.00 | 0.00 | 40.82 | 2.40 |
691 | 699 | 7.889589 | TCTAAAATGCATCTACATACATCCG | 57.110 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
692 | 700 | 7.441836 | TCTAAAATGCATCTACATACATCCGT | 58.558 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
693 | 701 | 8.581578 | TCTAAAATGCATCTACATACATCCGTA | 58.418 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
694 | 702 | 9.371136 | CTAAAATGCATCTACATACATCCGTAT | 57.629 | 33.333 | 0.00 | 0.00 | 38.96 | 3.06 |
702 | 710 | 3.744238 | CATACATCCGTATGTGGTCCA | 57.256 | 47.619 | 3.56 | 0.00 | 46.70 | 4.02 |
703 | 711 | 4.271696 | CATACATCCGTATGTGGTCCAT | 57.728 | 45.455 | 3.56 | 0.00 | 46.70 | 3.41 |
704 | 712 | 5.400066 | CATACATCCGTATGTGGTCCATA | 57.600 | 43.478 | 3.56 | 0.00 | 46.70 | 2.74 |
705 | 713 | 5.789521 | CATACATCCGTATGTGGTCCATAA | 58.210 | 41.667 | 3.56 | 0.00 | 46.70 | 1.90 |
706 | 714 | 4.974645 | ACATCCGTATGTGGTCCATAAT | 57.025 | 40.909 | 0.00 | 0.00 | 44.79 | 1.28 |
707 | 715 | 7.552459 | CATACATCCGTATGTGGTCCATAATA | 58.448 | 38.462 | 3.56 | 0.00 | 46.70 | 0.98 |
708 | 716 | 6.428083 | ACATCCGTATGTGGTCCATAATAA | 57.572 | 37.500 | 0.00 | 0.00 | 44.79 | 1.40 |
709 | 717 | 6.833041 | ACATCCGTATGTGGTCCATAATAAA | 58.167 | 36.000 | 0.00 | 0.00 | 44.79 | 1.40 |
710 | 718 | 7.284074 | ACATCCGTATGTGGTCCATAATAAAA | 58.716 | 34.615 | 0.00 | 0.00 | 44.79 | 1.52 |
711 | 719 | 7.942341 | ACATCCGTATGTGGTCCATAATAAAAT | 59.058 | 33.333 | 0.00 | 0.00 | 44.79 | 1.82 |
712 | 720 | 7.972832 | TCCGTATGTGGTCCATAATAAAATC | 57.027 | 36.000 | 0.00 | 0.00 | 37.77 | 2.17 |
713 | 721 | 7.741785 | TCCGTATGTGGTCCATAATAAAATCT | 58.258 | 34.615 | 0.00 | 0.00 | 37.77 | 2.40 |
714 | 722 | 7.876068 | TCCGTATGTGGTCCATAATAAAATCTC | 59.124 | 37.037 | 0.00 | 0.00 | 37.77 | 2.75 |
715 | 723 | 7.878127 | CCGTATGTGGTCCATAATAAAATCTCT | 59.122 | 37.037 | 0.00 | 0.00 | 37.77 | 3.10 |
716 | 724 | 9.923143 | CGTATGTGGTCCATAATAAAATCTCTA | 57.077 | 33.333 | 0.00 | 0.00 | 37.77 | 2.43 |
743 | 751 | 8.919777 | AAAGATTTATATTTAGGAACGGAGGG | 57.080 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
744 | 752 | 7.867160 | AGATTTATATTTAGGAACGGAGGGA | 57.133 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
745 | 753 | 7.908453 | AGATTTATATTTAGGAACGGAGGGAG | 58.092 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
746 | 754 | 6.429521 | TTTATATTTAGGAACGGAGGGAGG | 57.570 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
747 | 755 | 2.265526 | ATTTAGGAACGGAGGGAGGT | 57.734 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
748 | 756 | 2.034436 | TTTAGGAACGGAGGGAGGTT | 57.966 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
749 | 757 | 1.272807 | TTAGGAACGGAGGGAGGTTG | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
750 | 758 | 0.616679 | TAGGAACGGAGGGAGGTTGG | 60.617 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
751 | 759 | 1.916777 | GGAACGGAGGGAGGTTGGA | 60.917 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
752 | 760 | 1.272554 | GGAACGGAGGGAGGTTGGAT | 61.273 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
753 | 761 | 0.107654 | GAACGGAGGGAGGTTGGATG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
754 | 762 | 0.546747 | AACGGAGGGAGGTTGGATGA | 60.547 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
755 | 763 | 0.546747 | ACGGAGGGAGGTTGGATGAA | 60.547 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
756 | 764 | 0.179000 | CGGAGGGAGGTTGGATGAAG | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
757 | 765 | 0.548510 | GGAGGGAGGTTGGATGAAGG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
758 | 766 | 0.548510 | GAGGGAGGTTGGATGAAGGG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
759 | 767 | 1.076705 | GGGAGGTTGGATGAAGGGC | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
760 | 768 | 1.575447 | GGGAGGTTGGATGAAGGGCT | 61.575 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
761 | 769 | 0.394899 | GGAGGTTGGATGAAGGGCTG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
762 | 770 | 0.394899 | GAGGTTGGATGAAGGGCTGG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
763 | 771 | 1.142688 | AGGTTGGATGAAGGGCTGGT | 61.143 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
764 | 772 | 0.967380 | GGTTGGATGAAGGGCTGGTG | 60.967 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
765 | 773 | 0.967380 | GTTGGATGAAGGGCTGGTGG | 60.967 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
766 | 774 | 2.153898 | TTGGATGAAGGGCTGGTGGG | 62.154 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
767 | 775 | 2.308722 | GGATGAAGGGCTGGTGGGA | 61.309 | 63.158 | 0.00 | 0.00 | 0.00 | 4.37 |
768 | 776 | 1.691219 | GATGAAGGGCTGGTGGGAA | 59.309 | 57.895 | 0.00 | 0.00 | 0.00 | 3.97 |
769 | 777 | 0.394899 | GATGAAGGGCTGGTGGGAAG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
770 | 778 | 0.846427 | ATGAAGGGCTGGTGGGAAGA | 60.846 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
771 | 779 | 1.065410 | TGAAGGGCTGGTGGGAAGAA | 61.065 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
772 | 780 | 0.112412 | GAAGGGCTGGTGGGAAGAAA | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
773 | 781 | 0.560688 | AAGGGCTGGTGGGAAGAAAA | 59.439 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
774 | 782 | 0.113190 | AGGGCTGGTGGGAAGAAAAG | 59.887 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
775 | 783 | 0.178961 | GGGCTGGTGGGAAGAAAAGT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
776 | 784 | 0.961753 | GGCTGGTGGGAAGAAAAGTG | 59.038 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
777 | 785 | 1.478654 | GGCTGGTGGGAAGAAAAGTGA | 60.479 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
778 | 786 | 2.306847 | GCTGGTGGGAAGAAAAGTGAA | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
779 | 787 | 2.693074 | GCTGGTGGGAAGAAAAGTGAAA | 59.307 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
780 | 788 | 3.321968 | GCTGGTGGGAAGAAAAGTGAAAT | 59.678 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
781 | 789 | 4.797275 | GCTGGTGGGAAGAAAAGTGAAATG | 60.797 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
782 | 790 | 4.541705 | TGGTGGGAAGAAAAGTGAAATGA | 58.458 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
783 | 791 | 4.584325 | TGGTGGGAAGAAAAGTGAAATGAG | 59.416 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
784 | 792 | 4.021981 | GGTGGGAAGAAAAGTGAAATGAGG | 60.022 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
785 | 793 | 4.827284 | GTGGGAAGAAAAGTGAAATGAGGA | 59.173 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
786 | 794 | 5.048434 | GTGGGAAGAAAAGTGAAATGAGGAG | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
787 | 795 | 5.163099 | TGGGAAGAAAAGTGAAATGAGGAGA | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
788 | 796 | 5.414144 | GGGAAGAAAAGTGAAATGAGGAGAG | 59.586 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
795 | 803 | 6.531503 | AAGTGAAATGAGGAGAGATACGAA | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
802 | 810 | 9.751542 | GAAATGAGGAGAGATACGAAATTTCTA | 57.248 | 33.333 | 15.92 | 7.95 | 31.80 | 2.10 |
842 | 850 | 2.280552 | TAGGTCCCACACGTCAGCC | 61.281 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
885 | 893 | 1.077429 | GGTGGTGATCAGGGCTTCC | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
1302 | 1314 | 4.500116 | GCCGTCCTCAGCGACCTC | 62.500 | 72.222 | 0.00 | 0.00 | 0.00 | 3.85 |
1333 | 1345 | 1.213013 | CTCGACTGGGACGAAGGTG | 59.787 | 63.158 | 0.00 | 0.00 | 39.23 | 4.00 |
1334 | 1346 | 1.228337 | TCGACTGGGACGAAGGTGA | 60.228 | 57.895 | 0.00 | 0.00 | 36.84 | 4.02 |
1335 | 1347 | 1.080705 | CGACTGGGACGAAGGTGAC | 60.081 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
1336 | 1348 | 1.292541 | GACTGGGACGAAGGTGACC | 59.707 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1338 | 1350 | 2.203523 | TGGGACGAAGGTGACCGA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.69 |
1339 | 1351 | 2.214181 | CTGGGACGAAGGTGACCGAG | 62.214 | 65.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1341 | 1353 | 2.572284 | GACGAAGGTGACCGAGGG | 59.428 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1343 | 1355 | 3.382832 | CGAAGGTGACCGAGGGCT | 61.383 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
1344 | 1356 | 2.943978 | CGAAGGTGACCGAGGGCTT | 61.944 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
1345 | 1357 | 1.375326 | GAAGGTGACCGAGGGCTTT | 59.625 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
1347 | 1359 | 0.250770 | AAGGTGACCGAGGGCTTTTC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1361 | 1418 | 4.020128 | AGGGCTTTTCGATGACTAGAGTTT | 60.020 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
1384 | 1441 | 4.993029 | AGAACGAATTCCTACTCTGGAG | 57.007 | 45.455 | 0.00 | 0.00 | 37.43 | 3.86 |
1386 | 1443 | 4.399934 | AGAACGAATTCCTACTCTGGAGTC | 59.600 | 45.833 | 6.52 | 0.00 | 37.94 | 3.36 |
1389 | 1446 | 3.067461 | CGAATTCCTACTCTGGAGTCTGG | 59.933 | 52.174 | 6.52 | 10.53 | 42.54 | 3.86 |
1390 | 1447 | 4.282496 | GAATTCCTACTCTGGAGTCTGGA | 58.718 | 47.826 | 15.98 | 15.98 | 42.54 | 3.86 |
1395 | 1487 | 3.131933 | CCTACTCTGGAGTCTGGATTGTG | 59.868 | 52.174 | 6.52 | 0.00 | 42.54 | 3.33 |
1396 | 1488 | 2.614259 | ACTCTGGAGTCTGGATTGTGT | 58.386 | 47.619 | 0.00 | 0.00 | 36.92 | 3.72 |
1405 | 1497 | 5.163713 | GGAGTCTGGATTGTGTTTGCTTATC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 1.75 |
1406 | 1498 | 4.702131 | AGTCTGGATTGTGTTTGCTTATCC | 59.298 | 41.667 | 0.00 | 0.00 | 36.22 | 2.59 |
1407 | 1499 | 4.016444 | TCTGGATTGTGTTTGCTTATCCC | 58.984 | 43.478 | 0.00 | 0.00 | 35.06 | 3.85 |
1412 | 1504 | 1.271108 | TGTGTTTGCTTATCCCGCTGA | 60.271 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
1418 | 1510 | 1.211703 | TGCTTATCCCGCTGAATTGGA | 59.788 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
1430 | 1522 | 5.006746 | CCGCTGAATTGGAGTAGTTAATCAC | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1431 | 1523 | 5.812642 | CGCTGAATTGGAGTAGTTAATCACT | 59.187 | 40.000 | 0.00 | 0.00 | 39.87 | 3.41 |
1432 | 1524 | 6.978659 | CGCTGAATTGGAGTAGTTAATCACTA | 59.021 | 38.462 | 0.00 | 0.00 | 36.88 | 2.74 |
1433 | 1525 | 7.168302 | CGCTGAATTGGAGTAGTTAATCACTAG | 59.832 | 40.741 | 0.00 | 0.00 | 38.77 | 2.57 |
1434 | 1526 | 8.198109 | GCTGAATTGGAGTAGTTAATCACTAGA | 58.802 | 37.037 | 0.00 | 0.00 | 38.77 | 2.43 |
1435 | 1527 | 9.743057 | CTGAATTGGAGTAGTTAATCACTAGAG | 57.257 | 37.037 | 0.00 | 0.00 | 38.77 | 2.43 |
1436 | 1528 | 9.256228 | TGAATTGGAGTAGTTAATCACTAGAGT | 57.744 | 33.333 | 0.00 | 0.00 | 38.77 | 3.24 |
1463 | 1555 | 6.942576 | AGTAGAATCTGTTACCTGCAAATTGT | 59.057 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
1474 | 1566 | 3.922240 | CCTGCAAATTGTTGTGCTCATAC | 59.078 | 43.478 | 1.83 | 0.00 | 41.48 | 2.39 |
1529 | 1621 | 3.400054 | GGCCCTTACCGCCAGTCT | 61.400 | 66.667 | 0.00 | 0.00 | 46.27 | 3.24 |
1606 | 1698 | 3.361794 | TTATCGCTGCTTCTGCTCTAG | 57.638 | 47.619 | 0.00 | 0.00 | 40.48 | 2.43 |
1619 | 1711 | 6.629291 | GCTTCTGCTCTAGTGAGGTATCTTTT | 60.629 | 42.308 | 0.00 | 0.00 | 40.53 | 2.27 |
1641 | 1733 | 1.277580 | CCCCTCTCCTGACCTGCATT | 61.278 | 60.000 | 0.00 | 0.00 | 0.00 | 3.56 |
1658 | 1750 | 3.258872 | TGCATTTTTGCCTGCTTAGTGAT | 59.741 | 39.130 | 0.00 | 0.00 | 39.16 | 3.06 |
1772 | 1864 | 7.903995 | TCCTCAAATGAATTATTTTGGTTGC | 57.096 | 32.000 | 10.89 | 0.00 | 36.87 | 4.17 |
1893 | 1986 | 5.010112 | TGAACAATTTGAGGGCGTTATTTCA | 59.990 | 36.000 | 2.79 | 0.00 | 0.00 | 2.69 |
1927 | 2022 | 1.117150 | CTGGCCTGGCTGCAATATTT | 58.883 | 50.000 | 19.68 | 0.00 | 0.00 | 1.40 |
1931 | 2026 | 2.035066 | GGCCTGGCTGCAATATTTACTG | 59.965 | 50.000 | 19.68 | 0.00 | 0.00 | 2.74 |
1959 | 2054 | 6.512342 | AATAGTAGCTCGTCTAACAAGTGT | 57.488 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
1967 | 2062 | 7.544622 | AGCTCGTCTAACAAGTGTTATTGATA | 58.455 | 34.615 | 4.43 | 0.00 | 39.49 | 2.15 |
1971 | 2066 | 9.701098 | TCGTCTAACAAGTGTTATTGATACTTT | 57.299 | 29.630 | 4.43 | 0.00 | 37.58 | 2.66 |
1993 | 2088 | 7.780271 | ACTTTAGGAACTTGAGAAAATGAAGGT | 59.220 | 33.333 | 0.00 | 0.00 | 41.75 | 3.50 |
2135 | 2230 | 5.684813 | GCCAAAGGAAGGTTCACTGAAAATT | 60.685 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2180 | 2275 | 6.942576 | AGGTAATGACATAAAGTGTTTGAGCT | 59.057 | 34.615 | 0.00 | 0.00 | 42.36 | 4.09 |
2185 | 2280 | 6.611381 | TGACATAAAGTGTTTGAGCTTATGC | 58.389 | 36.000 | 0.00 | 0.00 | 42.36 | 3.14 |
2202 | 2303 | 7.026631 | GCTTATGCTTTCACATTACCATACA | 57.973 | 36.000 | 0.00 | 0.00 | 36.03 | 2.29 |
2204 | 2305 | 8.137437 | GCTTATGCTTTCACATTACCATACATT | 58.863 | 33.333 | 0.00 | 0.00 | 36.03 | 2.71 |
2211 | 2312 | 5.810095 | TCACATTACCATACATTCACACCA | 58.190 | 37.500 | 0.00 | 0.00 | 0.00 | 4.17 |
2213 | 2314 | 6.542005 | TCACATTACCATACATTCACACCATC | 59.458 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
2218 | 2319 | 6.061022 | ACCATACATTCACACCATCAACTA | 57.939 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
2230 | 2331 | 7.041721 | CACACCATCAACTACTCTTATGCTTA | 58.958 | 38.462 | 0.00 | 0.00 | 0.00 | 3.09 |
2240 | 2341 | 7.638134 | ACTACTCTTATGCTTACTACGTTAGC | 58.362 | 38.462 | 0.00 | 0.00 | 38.47 | 3.09 |
2249 | 2350 | 7.372451 | TGCTTACTACGTTAGCAATTCAAAT | 57.628 | 32.000 | 5.35 | 0.00 | 43.54 | 2.32 |
2250 | 2351 | 8.481974 | TGCTTACTACGTTAGCAATTCAAATA | 57.518 | 30.769 | 5.35 | 0.00 | 43.54 | 1.40 |
2284 | 2387 | 6.581370 | GTGTGTCGCACAATGATATACATAC | 58.419 | 40.000 | 11.68 | 0.00 | 46.28 | 2.39 |
2382 | 2485 | 2.289565 | GGCCAGCCAGTGTATAACTTC | 58.710 | 52.381 | 3.12 | 0.00 | 36.83 | 3.01 |
2388 | 2491 | 4.997395 | CAGCCAGTGTATAACTTCTGTGTT | 59.003 | 41.667 | 0.00 | 0.00 | 36.83 | 3.32 |
2391 | 2494 | 5.061808 | GCCAGTGTATAACTTCTGTGTTACG | 59.938 | 44.000 | 0.00 | 0.00 | 36.83 | 3.18 |
2421 | 2524 | 1.495878 | CTACCATGCGCATCTCTCAC | 58.504 | 55.000 | 22.51 | 0.00 | 0.00 | 3.51 |
2434 | 2537 | 5.533482 | GCATCTCTCACGTTATCAGGTAAT | 58.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
2436 | 2539 | 6.735968 | GCATCTCTCACGTTATCAGGTAATGA | 60.736 | 42.308 | 0.00 | 0.00 | 43.70 | 2.57 |
2440 | 2543 | 7.759886 | TCTCTCACGTTATCAGGTAATGAAAAG | 59.240 | 37.037 | 0.00 | 0.00 | 42.53 | 2.27 |
2477 | 2580 | 4.943705 | GTCCTTACTTTTGATCATCTGGCA | 59.056 | 41.667 | 0.00 | 0.00 | 0.00 | 4.92 |
2479 | 2582 | 4.946157 | CCTTACTTTTGATCATCTGGCACT | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
2488 | 2591 | 5.198207 | TGATCATCTGGCACTGAATTCATT | 58.802 | 37.500 | 8.96 | 0.00 | 40.32 | 2.57 |
2489 | 2592 | 5.655090 | TGATCATCTGGCACTGAATTCATTT | 59.345 | 36.000 | 8.96 | 0.00 | 40.32 | 2.32 |
2491 | 2594 | 6.441093 | TCATCTGGCACTGAATTCATTTAC | 57.559 | 37.500 | 8.96 | 1.27 | 40.32 | 2.01 |
2494 | 2597 | 6.258230 | TCTGGCACTGAATTCATTTACTTG | 57.742 | 37.500 | 8.96 | 0.00 | 32.07 | 3.16 |
2495 | 2598 | 5.769662 | TCTGGCACTGAATTCATTTACTTGT | 59.230 | 36.000 | 8.96 | 0.00 | 32.07 | 3.16 |
2496 | 2599 | 5.771469 | TGGCACTGAATTCATTTACTTGTG | 58.229 | 37.500 | 8.96 | 12.25 | 0.00 | 3.33 |
2497 | 2600 | 5.163513 | GGCACTGAATTCATTTACTTGTGG | 58.836 | 41.667 | 18.06 | 3.93 | 0.00 | 4.17 |
2498 | 2601 | 4.622740 | GCACTGAATTCATTTACTTGTGGC | 59.377 | 41.667 | 18.06 | 10.15 | 0.00 | 5.01 |
2499 | 2602 | 5.163513 | CACTGAATTCATTTACTTGTGGCC | 58.836 | 41.667 | 8.96 | 0.00 | 0.00 | 5.36 |
2500 | 2603 | 4.832266 | ACTGAATTCATTTACTTGTGGCCA | 59.168 | 37.500 | 8.96 | 0.00 | 0.00 | 5.36 |
2501 | 2604 | 5.481473 | ACTGAATTCATTTACTTGTGGCCAT | 59.519 | 36.000 | 9.72 | 0.00 | 0.00 | 4.40 |
2502 | 2605 | 5.964758 | TGAATTCATTTACTTGTGGCCATC | 58.035 | 37.500 | 9.72 | 3.12 | 0.00 | 3.51 |
2503 | 2606 | 5.716228 | TGAATTCATTTACTTGTGGCCATCT | 59.284 | 36.000 | 9.72 | 0.00 | 0.00 | 2.90 |
2504 | 2607 | 5.587388 | ATTCATTTACTTGTGGCCATCTG | 57.413 | 39.130 | 9.72 | 4.30 | 0.00 | 2.90 |
2505 | 2608 | 3.355378 | TCATTTACTTGTGGCCATCTGG | 58.645 | 45.455 | 9.72 | 2.25 | 38.53 | 3.86 |
2523 | 2626 | 3.513680 | TGGCACAGAATTCATGCATTC | 57.486 | 42.857 | 26.62 | 9.75 | 41.27 | 2.67 |
2575 | 2679 | 1.668628 | CCAAACACATTACGGCAAGCC | 60.669 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
2653 | 2760 | 4.690748 | TCTTGACCTTCGAAATGTGTGATC | 59.309 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
2677 | 2784 | 3.756117 | AGTCCTGACCTTCAAAATGTCC | 58.244 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2678 | 2785 | 3.138283 | AGTCCTGACCTTCAAAATGTCCA | 59.862 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
2688 | 2795 | 6.666546 | ACCTTCAAAATGTCCATCTCATCAAT | 59.333 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2767 | 2887 | 6.407202 | TCTGGCTCCTGATAAAAGTAAACTC | 58.593 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2874 | 2994 | 5.007626 | TGTGACTGTCAAACTGTATTCTTGC | 59.992 | 40.000 | 12.81 | 0.00 | 30.17 | 4.01 |
3070 | 3197 | 4.380945 | TTGGGCTGGGGTGATGGC | 62.381 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
3103 | 3230 | 5.471116 | TGAGTTCTTCACCATTGATGACTTG | 59.529 | 40.000 | 0.00 | 0.00 | 36.04 | 3.16 |
3120 | 3247 | 5.258051 | TGACTTGGGTTAGTTTGTCAACTT | 58.742 | 37.500 | 0.00 | 0.00 | 40.66 | 2.66 |
3126 | 3253 | 8.804912 | TTGGGTTAGTTTGTCAACTTTTACTA | 57.195 | 30.769 | 0.00 | 0.00 | 40.66 | 1.82 |
3136 | 3263 | 3.135994 | CAACTTTTACTACACTGGGCGT | 58.864 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
3151 | 3278 | 5.465056 | CACTGGGCGTTTTTGAAAAACATAT | 59.535 | 36.000 | 26.99 | 8.49 | 0.00 | 1.78 |
3308 | 3435 | 3.889815 | TCATATTGCCAGGACCTTTCTG | 58.110 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
3340 | 3467 | 4.811969 | ACATGGGAAGTTGTATACGTGA | 57.188 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
3423 | 3550 | 3.403038 | ACGGTCACTTCCTTCTGATTTG | 58.597 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
3501 | 3628 | 6.801575 | TGAAAGTGGTTTTGCTAAAGTAAGG | 58.198 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3507 | 3634 | 4.082733 | GGTTTTGCTAAAGTAAGGCTGGAG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
3530 | 3665 | 6.119536 | AGTTCAATTTTCTGTACACACCAGA | 58.880 | 36.000 | 0.00 | 0.00 | 37.18 | 3.86 |
3567 | 3705 | 5.427157 | TGGAACTACATGCTAAAGGGATACA | 59.573 | 40.000 | 0.00 | 0.00 | 39.74 | 2.29 |
3568 | 3706 | 5.758784 | GGAACTACATGCTAAAGGGATACAC | 59.241 | 44.000 | 0.00 | 0.00 | 39.74 | 2.90 |
3569 | 3707 | 5.950544 | ACTACATGCTAAAGGGATACACA | 57.049 | 39.130 | 0.00 | 0.00 | 39.74 | 3.72 |
3595 | 3733 | 9.131791 | AGACTTATTTGACACAGTATTTGGTTT | 57.868 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
3642 | 3780 | 2.693074 | ACCACCAAAAGAAAGCGATGTT | 59.307 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
3643 | 3781 | 3.052036 | CCACCAAAAGAAAGCGATGTTG | 58.948 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
3644 | 3782 | 2.472488 | CACCAAAAGAAAGCGATGTTGC | 59.528 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
3645 | 3783 | 1.715519 | CCAAAAGAAAGCGATGTTGCG | 59.284 | 47.619 | 0.00 | 0.00 | 40.67 | 4.85 |
3646 | 3784 | 1.715519 | CAAAAGAAAGCGATGTTGCGG | 59.284 | 47.619 | 0.00 | 0.00 | 40.67 | 5.69 |
3647 | 3785 | 0.387239 | AAAGAAAGCGATGTTGCGGC | 60.387 | 50.000 | 0.00 | 0.00 | 40.67 | 6.53 |
3648 | 3786 | 1.514678 | AAGAAAGCGATGTTGCGGCA | 61.515 | 50.000 | 0.00 | 0.00 | 40.67 | 5.69 |
3649 | 3787 | 1.081509 | GAAAGCGATGTTGCGGCAA | 60.082 | 52.632 | 12.11 | 12.11 | 40.67 | 4.52 |
3650 | 3788 | 0.662970 | GAAAGCGATGTTGCGGCAAA | 60.663 | 50.000 | 18.23 | 8.41 | 40.67 | 3.68 |
3651 | 3789 | 0.664166 | AAAGCGATGTTGCGGCAAAG | 60.664 | 50.000 | 18.23 | 10.26 | 40.67 | 2.77 |
3652 | 3790 | 1.514678 | AAGCGATGTTGCGGCAAAGA | 61.515 | 50.000 | 18.23 | 7.58 | 40.67 | 2.52 |
3658 | 3796 | 3.608241 | CGATGTTGCGGCAAAGACTTAAA | 60.608 | 43.478 | 18.23 | 0.00 | 0.00 | 1.52 |
3659 | 3797 | 3.784701 | TGTTGCGGCAAAGACTTAAAA | 57.215 | 38.095 | 18.23 | 0.00 | 0.00 | 1.52 |
3660 | 3798 | 3.440228 | TGTTGCGGCAAAGACTTAAAAC | 58.560 | 40.909 | 18.23 | 1.91 | 0.00 | 2.43 |
3661 | 3799 | 2.785713 | TGCGGCAAAGACTTAAAACC | 57.214 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3662 | 3800 | 2.025155 | TGCGGCAAAGACTTAAAACCA | 58.975 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
3663 | 3801 | 2.427453 | TGCGGCAAAGACTTAAAACCAA | 59.573 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
3664 | 3802 | 3.119101 | TGCGGCAAAGACTTAAAACCAAA | 60.119 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
3665 | 3803 | 4.055360 | GCGGCAAAGACTTAAAACCAAAT | 58.945 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
3666 | 3804 | 5.221263 | TGCGGCAAAGACTTAAAACCAAATA | 60.221 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3667 | 3805 | 5.118050 | GCGGCAAAGACTTAAAACCAAATAC | 59.882 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3668 | 3806 | 6.443792 | CGGCAAAGACTTAAAACCAAATACT | 58.556 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
3669 | 3807 | 6.921307 | CGGCAAAGACTTAAAACCAAATACTT | 59.079 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3670 | 3808 | 7.096230 | CGGCAAAGACTTAAAACCAAATACTTG | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3734 | 3872 | 5.363005 | GGTTTAGGACTAGTTGCTATCCTGA | 59.637 | 44.000 | 8.46 | 0.00 | 41.76 | 3.86 |
3745 | 3883 | 5.877564 | AGTTGCTATCCTGAGAAGCTTTAAC | 59.122 | 40.000 | 0.00 | 0.00 | 37.16 | 2.01 |
3762 | 3903 | 9.927668 | AAGCTTTAACAATATGCACTATTTTGT | 57.072 | 25.926 | 0.00 | 0.00 | 40.98 | 2.83 |
3799 | 3940 | 2.353109 | GCTTTTGAAGGAGGGCATTGAC | 60.353 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3927 | 4068 | 5.494390 | TTACCCTTTTCCTGAACTACCTC | 57.506 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
3929 | 4070 | 2.913617 | CCCTTTTCCTGAACTACCTCCT | 59.086 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4003 | 4144 | 6.313519 | AGGCTTGTTCCTATCAATAACTGA | 57.686 | 37.500 | 0.00 | 0.00 | 38.81 | 3.41 |
4335 | 5377 | 7.089538 | TGCCACAACACATACAAGATTTATTG | 58.910 | 34.615 | 0.00 | 0.00 | 36.22 | 1.90 |
4444 | 5486 | 8.764287 | GTTGAAAGCACAGCTAACAAATAATTT | 58.236 | 29.630 | 10.58 | 0.00 | 38.25 | 1.82 |
4478 | 5520 | 3.209410 | CCTTGACAATCCTGGCTGATAC | 58.791 | 50.000 | 3.03 | 0.00 | 0.00 | 2.24 |
4666 | 5708 | 2.424956 | GGACAGTACCGTAATCCTCGTT | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4718 | 5760 | 3.917329 | CTCACTCTGGTTTCGTGAGTA | 57.083 | 47.619 | 9.76 | 0.00 | 45.83 | 2.59 |
4722 | 5764 | 2.186076 | CTCTGGTTTCGTGAGTATCGC | 58.814 | 52.381 | 0.00 | 0.00 | 43.58 | 4.58 |
4723 | 5765 | 1.816835 | TCTGGTTTCGTGAGTATCGCT | 59.183 | 47.619 | 0.00 | 0.00 | 45.19 | 4.93 |
5082 | 6133 | 8.613060 | ACTGCCAATATTTGATGATGTACTAG | 57.387 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
5111 | 6162 | 2.987413 | TTCTACGCCATGTGCTTTTG | 57.013 | 45.000 | 4.92 | 0.00 | 38.05 | 2.44 |
5123 | 6174 | 5.453198 | CCATGTGCTTTTGTTCCTAAAACCT | 60.453 | 40.000 | 0.00 | 0.00 | 0.00 | 3.50 |
5125 | 6176 | 6.139048 | TGTGCTTTTGTTCCTAAAACCTAC | 57.861 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
5126 | 6177 | 5.652891 | TGTGCTTTTGTTCCTAAAACCTACA | 59.347 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5245 | 6711 | 3.263425 | TGTGAACTGAAATACTCCCTCCC | 59.737 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
5250 | 6716 | 3.705072 | ACTGAAATACTCCCTCCCTTACG | 59.295 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
5285 | 6754 | 6.913873 | TTTGAACTAAGACCACACACTTAC | 57.086 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
5448 | 6921 | 1.812571 | ACTACTTTCGCTTGGCCAATG | 59.187 | 47.619 | 20.85 | 15.01 | 0.00 | 2.82 |
5460 | 6933 | 4.261909 | GCTTGGCCAATGAAGATCCTATTG | 60.262 | 45.833 | 20.85 | 2.71 | 0.00 | 1.90 |
5462 | 6935 | 5.645056 | TGGCCAATGAAGATCCTATTGTA | 57.355 | 39.130 | 0.61 | 0.00 | 31.55 | 2.41 |
5463 | 6936 | 6.012337 | TGGCCAATGAAGATCCTATTGTAA | 57.988 | 37.500 | 0.61 | 0.00 | 31.55 | 2.41 |
5464 | 6937 | 6.430864 | TGGCCAATGAAGATCCTATTGTAAA | 58.569 | 36.000 | 0.61 | 0.00 | 31.55 | 2.01 |
5465 | 6938 | 7.068702 | TGGCCAATGAAGATCCTATTGTAAAT | 58.931 | 34.615 | 0.61 | 0.00 | 31.55 | 1.40 |
5466 | 6939 | 7.231317 | TGGCCAATGAAGATCCTATTGTAAATC | 59.769 | 37.037 | 0.61 | 0.00 | 31.55 | 2.17 |
5501 | 7362 | 3.118223 | AGGGGCAGTTAGATTCTACAAGC | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
5524 | 7385 | 3.290710 | ACAAGATTCCGGGAATTCATGG | 58.709 | 45.455 | 22.53 | 12.20 | 31.89 | 3.66 |
5533 | 7394 | 3.397482 | CGGGAATTCATGGTTTTTGCAA | 58.603 | 40.909 | 7.93 | 0.00 | 0.00 | 4.08 |
5534 | 7395 | 3.812053 | CGGGAATTCATGGTTTTTGCAAA | 59.188 | 39.130 | 8.05 | 8.05 | 0.00 | 3.68 |
5535 | 7396 | 4.274459 | CGGGAATTCATGGTTTTTGCAAAA | 59.726 | 37.500 | 20.46 | 20.46 | 0.00 | 2.44 |
5616 | 7538 | 9.777575 | TTTTAAGCACACACTTTTAGTTCTTAC | 57.222 | 29.630 | 0.00 | 0.00 | 0.00 | 2.34 |
5619 | 7541 | 8.904099 | AAGCACACACTTTTAGTTCTTACTAT | 57.096 | 30.769 | 0.00 | 0.00 | 36.76 | 2.12 |
5620 | 7542 | 8.904099 | AGCACACACTTTTAGTTCTTACTATT | 57.096 | 30.769 | 0.00 | 0.00 | 36.76 | 1.73 |
5681 | 7621 | 5.979993 | TCCTACAAGTAATTACCATTCGCA | 58.020 | 37.500 | 12.05 | 0.00 | 0.00 | 5.10 |
5682 | 7622 | 6.408035 | TCCTACAAGTAATTACCATTCGCAA | 58.592 | 36.000 | 12.05 | 0.00 | 0.00 | 4.85 |
5685 | 7625 | 7.696453 | CCTACAAGTAATTACCATTCGCAAAAG | 59.304 | 37.037 | 12.05 | 0.00 | 0.00 | 2.27 |
5720 | 7660 | 9.727859 | ACATTTAATTACCCCAAAAATGTTACC | 57.272 | 29.630 | 7.20 | 0.00 | 44.25 | 2.85 |
5724 | 7664 | 6.614694 | ATTACCCCAAAAATGTTACCCTTC | 57.385 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
5725 | 7665 | 4.207698 | ACCCCAAAAATGTTACCCTTCT | 57.792 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
5729 | 7669 | 6.042322 | ACCCCAAAAATGTTACCCTTCTAAAC | 59.958 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
5731 | 7671 | 6.269077 | CCCAAAAATGTTACCCTTCTAAACCT | 59.731 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
5732 | 7672 | 7.151976 | CCAAAAATGTTACCCTTCTAAACCTG | 58.848 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
5735 | 7675 | 2.040679 | TGTTACCCTTCTAAACCTGGGC | 59.959 | 50.000 | 0.00 | 0.00 | 43.25 | 5.36 |
5736 | 7676 | 2.040679 | GTTACCCTTCTAAACCTGGGCA | 59.959 | 50.000 | 0.00 | 0.00 | 43.25 | 5.36 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
4 | 5 | 1.591703 | GGCACCACACGAGATGAGA | 59.408 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
21 | 22 | 0.958822 | CTTCCCCCAAACAAAGACGG | 59.041 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
33 | 34 | 0.999712 | TTGGACCTTCATCTTCCCCC | 59.000 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
34 | 35 | 1.916181 | TCTTGGACCTTCATCTTCCCC | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
35 | 36 | 3.244911 | TGTTCTTGGACCTTCATCTTCCC | 60.245 | 47.826 | 0.00 | 0.00 | 0.00 | 3.97 |
36 | 37 | 4.021102 | TGTTCTTGGACCTTCATCTTCC | 57.979 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
37 | 38 | 4.457257 | CCTTGTTCTTGGACCTTCATCTTC | 59.543 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
38 | 39 | 4.141158 | ACCTTGTTCTTGGACCTTCATCTT | 60.141 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
39 | 40 | 3.395941 | ACCTTGTTCTTGGACCTTCATCT | 59.604 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
41 | 42 | 3.884037 | ACCTTGTTCTTGGACCTTCAT | 57.116 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
42 | 43 | 3.287222 | CAACCTTGTTCTTGGACCTTCA | 58.713 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
56 | 64 | 1.181098 | CCCACAAGCCTCCAACCTTG | 61.181 | 60.000 | 0.00 | 0.00 | 43.05 | 3.61 |
86 | 94 | 1.745232 | TGTCGTTGAGGCAAAACACT | 58.255 | 45.000 | 3.67 | 0.00 | 0.00 | 3.55 |
99 | 107 | 0.177836 | TCCATGCCATCGATGTCGTT | 59.822 | 50.000 | 23.27 | 0.17 | 40.80 | 3.85 |
125 | 133 | 2.037136 | CGTGCTCCTCAAAGCCCAG | 61.037 | 63.158 | 0.00 | 0.00 | 41.77 | 4.45 |
130 | 138 | 0.745845 | CATCCCCGTGCTCCTCAAAG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
160 | 168 | 0.794229 | CATTGTCGTTGTGGCGCATC | 60.794 | 55.000 | 10.83 | 0.00 | 0.00 | 3.91 |
173 | 181 | 2.877691 | GCCGGCAAGGTCATTGTC | 59.122 | 61.111 | 24.80 | 0.00 | 43.70 | 3.18 |
191 | 199 | 0.897401 | AGCTGAAGAAAAGGCCTGCC | 60.897 | 55.000 | 5.69 | 0.00 | 0.00 | 4.85 |
220 | 228 | 3.426615 | AGAAACACCATCGCCCATAAAA | 58.573 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
245 | 253 | 0.169672 | CCGCTTAACGTCTTCGGAGA | 59.830 | 55.000 | 11.45 | 0.00 | 42.43 | 3.71 |
250 | 258 | 0.863144 | TGTTGCCGCTTAACGTCTTC | 59.137 | 50.000 | 0.00 | 0.00 | 41.42 | 2.87 |
257 | 265 | 0.243365 | CAGCCATTGTTGCCGCTTAA | 59.757 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
258 | 266 | 0.893270 | ACAGCCATTGTTGCCGCTTA | 60.893 | 50.000 | 0.00 | 0.00 | 36.31 | 3.09 |
268 | 276 | 3.250744 | CAGATTTCTGCAACAGCCATTG | 58.749 | 45.455 | 0.00 | 0.00 | 37.15 | 2.82 |
269 | 277 | 3.587797 | CAGATTTCTGCAACAGCCATT | 57.412 | 42.857 | 0.00 | 0.00 | 37.15 | 3.16 |
294 | 302 | 7.049754 | AGAAACATTTGCAAGAAAACTCCATT | 58.950 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
340 | 348 | 7.094975 | ACGAAATCACGAAAACCATGATAGAAA | 60.095 | 33.333 | 0.00 | 0.00 | 32.74 | 2.52 |
341 | 349 | 6.370442 | ACGAAATCACGAAAACCATGATAGAA | 59.630 | 34.615 | 0.00 | 0.00 | 32.74 | 2.10 |
342 | 350 | 5.872617 | ACGAAATCACGAAAACCATGATAGA | 59.127 | 36.000 | 0.00 | 0.00 | 32.74 | 1.98 |
394 | 402 | 1.019278 | CGCACGGGCATTGTTCTAGT | 61.019 | 55.000 | 11.77 | 0.00 | 41.24 | 2.57 |
395 | 403 | 1.019278 | ACGCACGGGCATTGTTCTAG | 61.019 | 55.000 | 11.77 | 0.00 | 41.24 | 2.43 |
396 | 404 | 0.604243 | AACGCACGGGCATTGTTCTA | 60.604 | 50.000 | 11.77 | 0.00 | 41.24 | 2.10 |
397 | 405 | 1.896660 | AACGCACGGGCATTGTTCT | 60.897 | 52.632 | 11.77 | 0.00 | 41.24 | 3.01 |
398 | 406 | 1.729131 | CAACGCACGGGCATTGTTC | 60.729 | 57.895 | 10.90 | 0.00 | 38.34 | 3.18 |
399 | 407 | 2.334653 | CAACGCACGGGCATTGTT | 59.665 | 55.556 | 10.90 | 2.50 | 38.34 | 2.83 |
400 | 408 | 4.341502 | GCAACGCACGGGCATTGT | 62.342 | 61.111 | 20.63 | 0.74 | 44.58 | 2.71 |
401 | 409 | 3.837908 | TTGCAACGCACGGGCATTG | 62.838 | 57.895 | 15.24 | 15.24 | 45.48 | 2.82 |
402 | 410 | 3.600694 | TTGCAACGCACGGGCATT | 61.601 | 55.556 | 11.77 | 0.00 | 38.71 | 3.56 |
403 | 411 | 4.341502 | GTTGCAACGCACGGGCAT | 62.342 | 61.111 | 14.90 | 0.00 | 38.71 | 4.40 |
413 | 421 | 9.216117 | ACTAGAATATTTATATCCCGTTGCAAC | 57.784 | 33.333 | 19.89 | 19.89 | 0.00 | 4.17 |
432 | 440 | 9.379791 | GTAAACCACAAGCTAACATACTAGAAT | 57.620 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
433 | 441 | 7.820872 | GGTAAACCACAAGCTAACATACTAGAA | 59.179 | 37.037 | 0.00 | 0.00 | 35.64 | 2.10 |
434 | 442 | 7.179694 | AGGTAAACCACAAGCTAACATACTAGA | 59.820 | 37.037 | 0.00 | 0.00 | 38.89 | 2.43 |
435 | 443 | 7.328737 | AGGTAAACCACAAGCTAACATACTAG | 58.671 | 38.462 | 1.26 | 0.00 | 38.89 | 2.57 |
436 | 444 | 7.248743 | AGGTAAACCACAAGCTAACATACTA | 57.751 | 36.000 | 1.26 | 0.00 | 38.89 | 1.82 |
437 | 445 | 6.123045 | AGGTAAACCACAAGCTAACATACT | 57.877 | 37.500 | 1.26 | 0.00 | 38.89 | 2.12 |
438 | 446 | 7.767198 | TGATAGGTAAACCACAAGCTAACATAC | 59.233 | 37.037 | 1.26 | 0.00 | 38.89 | 2.39 |
439 | 447 | 7.853299 | TGATAGGTAAACCACAAGCTAACATA | 58.147 | 34.615 | 1.26 | 0.00 | 38.89 | 2.29 |
440 | 448 | 6.717289 | TGATAGGTAAACCACAAGCTAACAT | 58.283 | 36.000 | 1.26 | 0.00 | 38.89 | 2.71 |
441 | 449 | 6.116711 | TGATAGGTAAACCACAAGCTAACA | 57.883 | 37.500 | 1.26 | 0.00 | 38.89 | 2.41 |
442 | 450 | 7.625828 | ATTGATAGGTAAACCACAAGCTAAC | 57.374 | 36.000 | 1.26 | 0.00 | 38.89 | 2.34 |
443 | 451 | 9.914834 | ATTATTGATAGGTAAACCACAAGCTAA | 57.085 | 29.630 | 1.26 | 3.23 | 38.89 | 3.09 |
445 | 453 | 9.914834 | TTATTATTGATAGGTAAACCACAAGCT | 57.085 | 29.630 | 1.26 | 0.00 | 38.89 | 3.74 |
449 | 457 | 8.779303 | CGCATTATTATTGATAGGTAAACCACA | 58.221 | 33.333 | 1.26 | 0.00 | 38.89 | 4.17 |
450 | 458 | 8.995220 | TCGCATTATTATTGATAGGTAAACCAC | 58.005 | 33.333 | 1.26 | 0.00 | 38.89 | 4.16 |
451 | 459 | 9.733556 | ATCGCATTATTATTGATAGGTAAACCA | 57.266 | 29.630 | 1.26 | 0.00 | 38.89 | 3.67 |
472 | 480 | 9.631452 | TGATGAACATTTATTTACAAAATCGCA | 57.369 | 25.926 | 0.00 | 0.00 | 0.00 | 5.10 |
483 | 491 | 9.357652 | CGGTCAGAATTTGATGAACATTTATTT | 57.642 | 29.630 | 5.49 | 0.00 | 38.29 | 1.40 |
484 | 492 | 8.522830 | ACGGTCAGAATTTGATGAACATTTATT | 58.477 | 29.630 | 5.49 | 0.00 | 38.29 | 1.40 |
485 | 493 | 7.970061 | CACGGTCAGAATTTGATGAACATTTAT | 59.030 | 33.333 | 5.49 | 0.00 | 38.29 | 1.40 |
486 | 494 | 7.174080 | TCACGGTCAGAATTTGATGAACATTTA | 59.826 | 33.333 | 5.49 | 0.00 | 38.29 | 1.40 |
487 | 495 | 6.016360 | TCACGGTCAGAATTTGATGAACATTT | 60.016 | 34.615 | 5.49 | 0.00 | 38.29 | 2.32 |
488 | 496 | 5.473162 | TCACGGTCAGAATTTGATGAACATT | 59.527 | 36.000 | 5.49 | 0.00 | 38.29 | 2.71 |
489 | 497 | 5.003160 | TCACGGTCAGAATTTGATGAACAT | 58.997 | 37.500 | 5.49 | 0.00 | 38.29 | 2.71 |
490 | 498 | 4.384940 | TCACGGTCAGAATTTGATGAACA | 58.615 | 39.130 | 5.49 | 0.00 | 38.29 | 3.18 |
491 | 499 | 5.356882 | TTCACGGTCAGAATTTGATGAAC | 57.643 | 39.130 | 0.00 | 0.00 | 38.29 | 3.18 |
492 | 500 | 6.573664 | AATTCACGGTCAGAATTTGATGAA | 57.426 | 33.333 | 1.75 | 0.00 | 41.54 | 2.57 |
493 | 501 | 6.093495 | GGTAATTCACGGTCAGAATTTGATGA | 59.907 | 38.462 | 10.52 | 0.00 | 41.54 | 2.92 |
494 | 502 | 6.094048 | AGGTAATTCACGGTCAGAATTTGATG | 59.906 | 38.462 | 10.52 | 0.00 | 41.54 | 3.07 |
495 | 503 | 6.180472 | AGGTAATTCACGGTCAGAATTTGAT | 58.820 | 36.000 | 10.52 | 0.00 | 41.54 | 2.57 |
496 | 504 | 5.556915 | AGGTAATTCACGGTCAGAATTTGA | 58.443 | 37.500 | 10.52 | 0.00 | 41.54 | 2.69 |
497 | 505 | 5.880054 | AGGTAATTCACGGTCAGAATTTG | 57.120 | 39.130 | 10.52 | 0.00 | 41.54 | 2.32 |
498 | 506 | 9.847224 | ATATAAGGTAATTCACGGTCAGAATTT | 57.153 | 29.630 | 10.52 | 0.00 | 41.54 | 1.82 |
499 | 507 | 9.847224 | AATATAAGGTAATTCACGGTCAGAATT | 57.153 | 29.630 | 10.22 | 10.22 | 45.05 | 2.17 |
500 | 508 | 9.847224 | AAATATAAGGTAATTCACGGTCAGAAT | 57.153 | 29.630 | 0.00 | 0.00 | 37.30 | 2.40 |
501 | 509 | 9.675464 | AAAATATAAGGTAATTCACGGTCAGAA | 57.325 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
502 | 510 | 9.104965 | CAAAATATAAGGTAATTCACGGTCAGA | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
503 | 511 | 9.104965 | TCAAAATATAAGGTAATTCACGGTCAG | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
504 | 512 | 9.621629 | ATCAAAATATAAGGTAATTCACGGTCA | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 4.02 |
547 | 555 | 9.546428 | CCTTCTGAACCAATTTCACTTTATTTT | 57.454 | 29.630 | 0.00 | 0.00 | 39.45 | 1.82 |
548 | 556 | 8.704668 | ACCTTCTGAACCAATTTCACTTTATTT | 58.295 | 29.630 | 0.00 | 0.00 | 39.45 | 1.40 |
549 | 557 | 8.250143 | ACCTTCTGAACCAATTTCACTTTATT | 57.750 | 30.769 | 0.00 | 0.00 | 39.45 | 1.40 |
550 | 558 | 7.839680 | ACCTTCTGAACCAATTTCACTTTAT | 57.160 | 32.000 | 0.00 | 0.00 | 39.45 | 1.40 |
551 | 559 | 8.754991 | TTACCTTCTGAACCAATTTCACTTTA | 57.245 | 30.769 | 0.00 | 0.00 | 39.45 | 1.85 |
552 | 560 | 7.342026 | ACTTACCTTCTGAACCAATTTCACTTT | 59.658 | 33.333 | 0.00 | 0.00 | 39.45 | 2.66 |
553 | 561 | 6.833933 | ACTTACCTTCTGAACCAATTTCACTT | 59.166 | 34.615 | 0.00 | 0.00 | 39.45 | 3.16 |
554 | 562 | 6.365520 | ACTTACCTTCTGAACCAATTTCACT | 58.634 | 36.000 | 0.00 | 0.00 | 39.45 | 3.41 |
555 | 563 | 6.635030 | ACTTACCTTCTGAACCAATTTCAC | 57.365 | 37.500 | 0.00 | 0.00 | 39.45 | 3.18 |
556 | 564 | 8.934023 | ATTACTTACCTTCTGAACCAATTTCA | 57.066 | 30.769 | 0.00 | 0.00 | 42.26 | 2.69 |
603 | 611 | 9.047947 | AGACTTATATTTAGAAACACAGGGAGT | 57.952 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
604 | 612 | 9.892130 | AAGACTTATATTTAGAAACACAGGGAG | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
623 | 631 | 8.696374 | CCATAGTGGAATCTCTACAAAGACTTA | 58.304 | 37.037 | 0.00 | 0.00 | 40.96 | 2.24 |
624 | 632 | 7.400339 | TCCATAGTGGAATCTCTACAAAGACTT | 59.600 | 37.037 | 0.00 | 0.00 | 45.00 | 3.01 |
625 | 633 | 6.897966 | TCCATAGTGGAATCTCTACAAAGACT | 59.102 | 38.462 | 0.00 | 0.00 | 45.00 | 3.24 |
626 | 634 | 7.113658 | TCCATAGTGGAATCTCTACAAAGAC | 57.886 | 40.000 | 0.00 | 0.00 | 45.00 | 3.01 |
640 | 648 | 7.066781 | TGTAGATTCATGTAGTCCATAGTGGA | 58.933 | 38.462 | 0.00 | 0.00 | 45.98 | 4.02 |
641 | 649 | 7.290110 | TGTAGATTCATGTAGTCCATAGTGG | 57.710 | 40.000 | 0.00 | 0.00 | 39.43 | 4.00 |
642 | 650 | 9.416794 | GAATGTAGATTCATGTAGTCCATAGTG | 57.583 | 37.037 | 7.69 | 0.00 | 38.33 | 2.74 |
643 | 651 | 9.373450 | AGAATGTAGATTCATGTAGTCCATAGT | 57.627 | 33.333 | 14.46 | 0.00 | 40.59 | 2.12 |
665 | 673 | 8.939929 | CGGATGTATGTAGATGCATTTTAGAAT | 58.060 | 33.333 | 0.00 | 0.00 | 35.26 | 2.40 |
666 | 674 | 7.931407 | ACGGATGTATGTAGATGCATTTTAGAA | 59.069 | 33.333 | 0.00 | 0.00 | 35.26 | 2.10 |
667 | 675 | 7.441836 | ACGGATGTATGTAGATGCATTTTAGA | 58.558 | 34.615 | 0.00 | 0.00 | 35.26 | 2.10 |
668 | 676 | 7.658179 | ACGGATGTATGTAGATGCATTTTAG | 57.342 | 36.000 | 0.00 | 1.10 | 35.26 | 1.85 |
683 | 691 | 6.620877 | ATTATGGACCACATACGGATGTAT | 57.379 | 37.500 | 14.23 | 4.48 | 44.82 | 2.29 |
684 | 692 | 7.541916 | TTATTATGGACCACATACGGATGTA | 57.458 | 36.000 | 14.23 | 0.00 | 44.82 | 2.29 |
686 | 694 | 7.737972 | TTTTATTATGGACCACATACGGATG | 57.262 | 36.000 | 5.94 | 5.94 | 41.61 | 3.51 |
687 | 695 | 8.383175 | AGATTTTATTATGGACCACATACGGAT | 58.617 | 33.333 | 0.00 | 0.00 | 41.61 | 4.18 |
688 | 696 | 7.741785 | AGATTTTATTATGGACCACATACGGA | 58.258 | 34.615 | 0.00 | 0.00 | 41.61 | 4.69 |
689 | 697 | 7.878127 | AGAGATTTTATTATGGACCACATACGG | 59.122 | 37.037 | 0.00 | 0.00 | 41.61 | 4.02 |
690 | 698 | 8.833231 | AGAGATTTTATTATGGACCACATACG | 57.167 | 34.615 | 0.00 | 0.00 | 41.61 | 3.06 |
718 | 726 | 8.720537 | TCCCTCCGTTCCTAAATATAAATCTTT | 58.279 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
719 | 727 | 8.271398 | TCCCTCCGTTCCTAAATATAAATCTT | 57.729 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
720 | 728 | 7.038231 | CCTCCCTCCGTTCCTAAATATAAATCT | 60.038 | 40.741 | 0.00 | 0.00 | 0.00 | 2.40 |
721 | 729 | 7.104290 | CCTCCCTCCGTTCCTAAATATAAATC | 58.896 | 42.308 | 0.00 | 0.00 | 0.00 | 2.17 |
722 | 730 | 6.561454 | ACCTCCCTCCGTTCCTAAATATAAAT | 59.439 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
723 | 731 | 5.907079 | ACCTCCCTCCGTTCCTAAATATAAA | 59.093 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
724 | 732 | 5.470501 | ACCTCCCTCCGTTCCTAAATATAA | 58.529 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
725 | 733 | 5.083953 | ACCTCCCTCCGTTCCTAAATATA | 57.916 | 43.478 | 0.00 | 0.00 | 0.00 | 0.86 |
726 | 734 | 3.937751 | ACCTCCCTCCGTTCCTAAATAT | 58.062 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
727 | 735 | 3.409804 | ACCTCCCTCCGTTCCTAAATA | 57.590 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
728 | 736 | 2.238898 | CAACCTCCCTCCGTTCCTAAAT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
729 | 737 | 1.626825 | CAACCTCCCTCCGTTCCTAAA | 59.373 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
730 | 738 | 1.272807 | CAACCTCCCTCCGTTCCTAA | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
731 | 739 | 0.616679 | CCAACCTCCCTCCGTTCCTA | 60.617 | 60.000 | 0.00 | 0.00 | 0.00 | 2.94 |
732 | 740 | 1.918800 | CCAACCTCCCTCCGTTCCT | 60.919 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
733 | 741 | 1.272554 | ATCCAACCTCCCTCCGTTCC | 61.273 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
734 | 742 | 0.107654 | CATCCAACCTCCCTCCGTTC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
735 | 743 | 0.546747 | TCATCCAACCTCCCTCCGTT | 60.547 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
736 | 744 | 0.546747 | TTCATCCAACCTCCCTCCGT | 60.547 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
737 | 745 | 0.179000 | CTTCATCCAACCTCCCTCCG | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
738 | 746 | 0.548510 | CCTTCATCCAACCTCCCTCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
739 | 747 | 0.548510 | CCCTTCATCCAACCTCCCTC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
740 | 748 | 1.575447 | GCCCTTCATCCAACCTCCCT | 61.575 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
741 | 749 | 1.076705 | GCCCTTCATCCAACCTCCC | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
742 | 750 | 0.394899 | CAGCCCTTCATCCAACCTCC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
743 | 751 | 0.394899 | CCAGCCCTTCATCCAACCTC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
744 | 752 | 1.142688 | ACCAGCCCTTCATCCAACCT | 61.143 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
745 | 753 | 0.967380 | CACCAGCCCTTCATCCAACC | 60.967 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
746 | 754 | 0.967380 | CCACCAGCCCTTCATCCAAC | 60.967 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
747 | 755 | 1.383799 | CCACCAGCCCTTCATCCAA | 59.616 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
748 | 756 | 2.615465 | CCCACCAGCCCTTCATCCA | 61.615 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
749 | 757 | 1.863155 | TTCCCACCAGCCCTTCATCC | 61.863 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
750 | 758 | 0.394899 | CTTCCCACCAGCCCTTCATC | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
751 | 759 | 0.846427 | TCTTCCCACCAGCCCTTCAT | 60.846 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
752 | 760 | 1.065410 | TTCTTCCCACCAGCCCTTCA | 61.065 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
753 | 761 | 0.112412 | TTTCTTCCCACCAGCCCTTC | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
754 | 762 | 0.560688 | TTTTCTTCCCACCAGCCCTT | 59.439 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
755 | 763 | 0.113190 | CTTTTCTTCCCACCAGCCCT | 59.887 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
756 | 764 | 0.178961 | ACTTTTCTTCCCACCAGCCC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
757 | 765 | 0.961753 | CACTTTTCTTCCCACCAGCC | 59.038 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
758 | 766 | 1.981256 | TCACTTTTCTTCCCACCAGC | 58.019 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
759 | 767 | 4.584325 | TCATTTCACTTTTCTTCCCACCAG | 59.416 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
760 | 768 | 4.541705 | TCATTTCACTTTTCTTCCCACCA | 58.458 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
761 | 769 | 4.021981 | CCTCATTTCACTTTTCTTCCCACC | 60.022 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
762 | 770 | 4.827284 | TCCTCATTTCACTTTTCTTCCCAC | 59.173 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
763 | 771 | 5.060427 | TCCTCATTTCACTTTTCTTCCCA | 57.940 | 39.130 | 0.00 | 0.00 | 0.00 | 4.37 |
764 | 772 | 5.316987 | TCTCCTCATTTCACTTTTCTTCCC | 58.683 | 41.667 | 0.00 | 0.00 | 0.00 | 3.97 |
765 | 773 | 6.234177 | TCTCTCCTCATTTCACTTTTCTTCC | 58.766 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
766 | 774 | 7.920160 | ATCTCTCCTCATTTCACTTTTCTTC | 57.080 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
767 | 775 | 7.547370 | CGTATCTCTCCTCATTTCACTTTTCTT | 59.453 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
768 | 776 | 7.038659 | CGTATCTCTCCTCATTTCACTTTTCT | 58.961 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
769 | 777 | 7.036220 | TCGTATCTCTCCTCATTTCACTTTTC | 58.964 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
770 | 778 | 6.936279 | TCGTATCTCTCCTCATTTCACTTTT | 58.064 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
771 | 779 | 6.531503 | TCGTATCTCTCCTCATTTCACTTT | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
772 | 780 | 6.531503 | TTCGTATCTCTCCTCATTTCACTT | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
773 | 781 | 6.531503 | TTTCGTATCTCTCCTCATTTCACT | 57.468 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
774 | 782 | 7.778470 | AATTTCGTATCTCTCCTCATTTCAC | 57.222 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
775 | 783 | 8.260818 | AGAAATTTCGTATCTCTCCTCATTTCA | 58.739 | 33.333 | 12.42 | 0.00 | 32.77 | 2.69 |
776 | 784 | 8.655651 | AGAAATTTCGTATCTCTCCTCATTTC | 57.344 | 34.615 | 12.42 | 0.00 | 0.00 | 2.17 |
780 | 788 | 9.938280 | TTTTTAGAAATTTCGTATCTCTCCTCA | 57.062 | 29.630 | 12.42 | 0.00 | 0.00 | 3.86 |
810 | 818 | 5.538813 | TGTGGGACCTACTATACTTAGCATG | 59.461 | 44.000 | 9.65 | 0.00 | 0.00 | 4.06 |
811 | 819 | 5.539193 | GTGTGGGACCTACTATACTTAGCAT | 59.461 | 44.000 | 9.65 | 0.00 | 0.00 | 3.79 |
814 | 822 | 5.128919 | ACGTGTGGGACCTACTATACTTAG | 58.871 | 45.833 | 9.65 | 0.00 | 0.00 | 2.18 |
815 | 823 | 5.116084 | ACGTGTGGGACCTACTATACTTA | 57.884 | 43.478 | 9.65 | 0.00 | 0.00 | 2.24 |
816 | 824 | 3.950395 | GACGTGTGGGACCTACTATACTT | 59.050 | 47.826 | 9.65 | 0.00 | 0.00 | 2.24 |
818 | 826 | 3.282021 | TGACGTGTGGGACCTACTATAC | 58.718 | 50.000 | 9.65 | 0.00 | 0.00 | 1.47 |
819 | 827 | 3.548770 | CTGACGTGTGGGACCTACTATA | 58.451 | 50.000 | 9.65 | 0.00 | 0.00 | 1.31 |
820 | 828 | 2.376109 | CTGACGTGTGGGACCTACTAT | 58.624 | 52.381 | 9.65 | 0.00 | 0.00 | 2.12 |
842 | 850 | 1.302832 | GAGGCCTGGTTGGTGTCTG | 60.303 | 63.158 | 12.00 | 0.00 | 38.35 | 3.51 |
1013 | 1022 | 1.810030 | GACGACGACCCCATGAAGC | 60.810 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
1047 | 1056 | 3.450115 | GTCACGGACGGGAGGAGG | 61.450 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1333 | 1345 | 0.108329 | TCATCGAAAAGCCCTCGGTC | 60.108 | 55.000 | 0.00 | 0.00 | 36.93 | 4.79 |
1334 | 1346 | 0.391263 | GTCATCGAAAAGCCCTCGGT | 60.391 | 55.000 | 0.00 | 0.00 | 36.93 | 4.69 |
1335 | 1347 | 0.108138 | AGTCATCGAAAAGCCCTCGG | 60.108 | 55.000 | 0.00 | 0.00 | 36.93 | 4.63 |
1336 | 1348 | 2.099263 | TCTAGTCATCGAAAAGCCCTCG | 59.901 | 50.000 | 0.00 | 0.00 | 37.66 | 4.63 |
1338 | 1350 | 3.100671 | ACTCTAGTCATCGAAAAGCCCT | 58.899 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
1339 | 1351 | 3.528597 | ACTCTAGTCATCGAAAAGCCC | 57.471 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
1341 | 1353 | 7.813852 | TCTTAAACTCTAGTCATCGAAAAGC | 57.186 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1343 | 1355 | 8.077991 | TCGTTCTTAAACTCTAGTCATCGAAAA | 58.922 | 33.333 | 0.00 | 0.00 | 32.95 | 2.29 |
1344 | 1356 | 7.587629 | TCGTTCTTAAACTCTAGTCATCGAAA | 58.412 | 34.615 | 0.00 | 0.00 | 32.95 | 3.46 |
1345 | 1357 | 7.137490 | TCGTTCTTAAACTCTAGTCATCGAA | 57.863 | 36.000 | 0.00 | 0.00 | 32.95 | 3.71 |
1347 | 1359 | 7.972623 | ATTCGTTCTTAAACTCTAGTCATCG | 57.027 | 36.000 | 0.00 | 0.00 | 32.95 | 3.84 |
1361 | 1418 | 5.950549 | ACTCCAGAGTAGGAATTCGTTCTTA | 59.049 | 40.000 | 5.89 | 0.00 | 40.43 | 2.10 |
1384 | 1441 | 4.142381 | GGGATAAGCAAACACAATCCAGAC | 60.142 | 45.833 | 0.00 | 0.00 | 38.28 | 3.51 |
1386 | 1443 | 3.181497 | CGGGATAAGCAAACACAATCCAG | 60.181 | 47.826 | 0.00 | 0.00 | 38.28 | 3.86 |
1389 | 1446 | 2.423538 | AGCGGGATAAGCAAACACAATC | 59.576 | 45.455 | 0.00 | 0.00 | 37.01 | 2.67 |
1390 | 1447 | 2.164219 | CAGCGGGATAAGCAAACACAAT | 59.836 | 45.455 | 0.00 | 0.00 | 37.01 | 2.71 |
1395 | 1487 | 3.438360 | CAATTCAGCGGGATAAGCAAAC | 58.562 | 45.455 | 0.00 | 0.00 | 37.01 | 2.93 |
1396 | 1488 | 2.426738 | CCAATTCAGCGGGATAAGCAAA | 59.573 | 45.455 | 0.00 | 0.00 | 37.01 | 3.68 |
1405 | 1497 | 2.403252 | AACTACTCCAATTCAGCGGG | 57.597 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1406 | 1498 | 5.006746 | GTGATTAACTACTCCAATTCAGCGG | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1407 | 1499 | 5.812642 | AGTGATTAACTACTCCAATTCAGCG | 59.187 | 40.000 | 0.00 | 0.00 | 37.36 | 5.18 |
1430 | 1522 | 7.468084 | GCAGGTAACAGATTCTACTCACTCTAG | 60.468 | 44.444 | 0.00 | 0.00 | 41.41 | 2.43 |
1431 | 1523 | 6.319152 | GCAGGTAACAGATTCTACTCACTCTA | 59.681 | 42.308 | 0.00 | 0.00 | 41.41 | 2.43 |
1432 | 1524 | 5.126384 | GCAGGTAACAGATTCTACTCACTCT | 59.874 | 44.000 | 0.00 | 0.00 | 41.41 | 3.24 |
1433 | 1525 | 5.105716 | TGCAGGTAACAGATTCTACTCACTC | 60.106 | 44.000 | 0.00 | 0.00 | 41.41 | 3.51 |
1434 | 1526 | 4.772624 | TGCAGGTAACAGATTCTACTCACT | 59.227 | 41.667 | 0.00 | 0.00 | 41.41 | 3.41 |
1435 | 1527 | 5.073311 | TGCAGGTAACAGATTCTACTCAC | 57.927 | 43.478 | 0.00 | 0.00 | 41.41 | 3.51 |
1436 | 1528 | 5.738619 | TTGCAGGTAACAGATTCTACTCA | 57.261 | 39.130 | 0.00 | 0.00 | 41.41 | 3.41 |
1463 | 1555 | 2.297880 | ACAGGTACACGTATGAGCACAA | 59.702 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
1474 | 1566 | 0.738412 | CGGGCCTAAACAGGTACACG | 60.738 | 60.000 | 0.84 | 0.00 | 0.00 | 4.49 |
1606 | 1698 | 3.523972 | AGAGGGGGAAAAAGATACCTCAC | 59.476 | 47.826 | 10.73 | 0.00 | 45.29 | 3.51 |
1619 | 1711 | 1.081092 | CAGGTCAGGAGAGGGGGAA | 59.919 | 63.158 | 0.00 | 0.00 | 0.00 | 3.97 |
1641 | 1733 | 5.252547 | TCATGTATCACTAAGCAGGCAAAA | 58.747 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
1658 | 1750 | 4.104102 | ACTTGGAACCAGGAAACTCATGTA | 59.896 | 41.667 | 9.85 | 0.00 | 40.21 | 2.29 |
1772 | 1864 | 5.665916 | ATCCCAAGCATTTTACTCAAAGG | 57.334 | 39.130 | 0.00 | 0.00 | 0.00 | 3.11 |
1893 | 1986 | 1.839424 | GCCAGGCCATGAGTTTACTT | 58.161 | 50.000 | 5.01 | 0.00 | 0.00 | 2.24 |
1927 | 2022 | 8.557864 | GTTAGACGAGCTACTATTTGATCAGTA | 58.442 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
1931 | 2026 | 7.916450 | ACTTGTTAGACGAGCTACTATTTGATC | 59.084 | 37.037 | 0.00 | 0.00 | 32.76 | 2.92 |
1967 | 2062 | 7.780271 | ACCTTCATTTTCTCAAGTTCCTAAAGT | 59.220 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
1971 | 2066 | 8.437575 | AGTTACCTTCATTTTCTCAAGTTCCTA | 58.562 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
1979 | 2074 | 4.637276 | TCGCAGTTACCTTCATTTTCTCA | 58.363 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
1993 | 2088 | 5.755375 | GGAATCTTCATCTGATTCGCAGTTA | 59.245 | 40.000 | 9.43 | 0.00 | 46.29 | 2.24 |
2000 | 2095 | 5.927819 | ACAGGAGGAATCTTCATCTGATTC | 58.072 | 41.667 | 5.84 | 7.66 | 45.26 | 2.52 |
2005 | 2100 | 7.038445 | CCATGTATACAGGAGGAATCTTCATCT | 60.038 | 40.741 | 18.73 | 0.00 | 38.04 | 2.90 |
2180 | 2275 | 9.183368 | TGAATGTATGGTAATGTGAAAGCATAA | 57.817 | 29.630 | 0.00 | 0.00 | 37.70 | 1.90 |
2185 | 2280 | 7.094420 | TGGTGTGAATGTATGGTAATGTGAAAG | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
2197 | 2298 | 7.044181 | AGAGTAGTTGATGGTGTGAATGTATG | 58.956 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
2198 | 2299 | 7.187824 | AGAGTAGTTGATGGTGTGAATGTAT | 57.812 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2201 | 2302 | 7.466455 | GCATAAGAGTAGTTGATGGTGTGAATG | 60.466 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
2202 | 2303 | 6.540189 | GCATAAGAGTAGTTGATGGTGTGAAT | 59.460 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
2204 | 2305 | 5.187772 | AGCATAAGAGTAGTTGATGGTGTGA | 59.812 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2211 | 2312 | 8.223177 | ACGTAGTAAGCATAAGAGTAGTTGAT | 57.777 | 34.615 | 0.00 | 0.00 | 41.94 | 2.57 |
2213 | 2314 | 9.435802 | CTAACGTAGTAAGCATAAGAGTAGTTG | 57.564 | 37.037 | 0.00 | 0.00 | 45.00 | 3.16 |
2218 | 2319 | 6.446781 | TGCTAACGTAGTAAGCATAAGAGT | 57.553 | 37.500 | 9.84 | 0.00 | 45.00 | 3.24 |
2230 | 2331 | 8.941977 | TCACAATATTTGAATTGCTAACGTAGT | 58.058 | 29.630 | 0.00 | 0.00 | 41.00 | 2.73 |
2244 | 2345 | 5.855925 | GCGACACACAATTCACAATATTTGA | 59.144 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2263 | 2364 | 6.420604 | CAGTGTATGTATATCATTGTGCGACA | 59.579 | 38.462 | 0.00 | 0.00 | 37.91 | 4.35 |
2266 | 2369 | 6.128822 | GGTCAGTGTATGTATATCATTGTGCG | 60.129 | 42.308 | 0.00 | 0.00 | 37.91 | 5.34 |
2272 | 2375 | 6.663523 | TCCGATGGTCAGTGTATGTATATCAT | 59.336 | 38.462 | 0.00 | 0.00 | 40.25 | 2.45 |
2284 | 2387 | 8.657074 | TTTATAAAACTATCCGATGGTCAGTG | 57.343 | 34.615 | 0.00 | 0.00 | 0.00 | 3.66 |
2382 | 2485 | 3.002791 | AGCATCATCAACCGTAACACAG | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
2388 | 2491 | 3.727726 | CATGGTAGCATCATCAACCGTA | 58.272 | 45.455 | 3.96 | 0.00 | 34.60 | 4.02 |
2391 | 2494 | 1.265095 | CGCATGGTAGCATCATCAACC | 59.735 | 52.381 | 3.96 | 0.00 | 0.00 | 3.77 |
2434 | 2537 | 8.934023 | AAGGACCAAGATGTAATAACTTTTCA | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
2448 | 2551 | 7.555554 | CAGATGATCAAAAGTAAGGACCAAGAT | 59.444 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
2464 | 2567 | 4.591929 | TGAATTCAGTGCCAGATGATCAA | 58.408 | 39.130 | 3.38 | 0.00 | 0.00 | 2.57 |
2477 | 2580 | 4.832266 | TGGCCACAAGTAAATGAATTCAGT | 59.168 | 37.500 | 14.54 | 8.63 | 0.00 | 3.41 |
2479 | 2582 | 5.716228 | AGATGGCCACAAGTAAATGAATTCA | 59.284 | 36.000 | 8.16 | 11.26 | 0.00 | 2.57 |
2498 | 2601 | 2.223735 | GCATGAATTCTGTGCCAGATGG | 60.224 | 50.000 | 19.37 | 0.00 | 40.39 | 3.51 |
2499 | 2602 | 2.425668 | TGCATGAATTCTGTGCCAGATG | 59.574 | 45.455 | 24.04 | 11.84 | 40.39 | 2.90 |
2500 | 2603 | 2.730382 | TGCATGAATTCTGTGCCAGAT | 58.270 | 42.857 | 24.04 | 0.57 | 40.39 | 2.90 |
2501 | 2604 | 2.203470 | TGCATGAATTCTGTGCCAGA | 57.797 | 45.000 | 24.04 | 10.54 | 38.87 | 3.86 |
2502 | 2605 | 3.130516 | AGAATGCATGAATTCTGTGCCAG | 59.869 | 43.478 | 25.53 | 0.00 | 43.65 | 4.85 |
2503 | 2606 | 3.093814 | AGAATGCATGAATTCTGTGCCA | 58.906 | 40.909 | 25.53 | 16.31 | 43.65 | 4.92 |
2504 | 2607 | 3.380637 | AGAGAATGCATGAATTCTGTGCC | 59.619 | 43.478 | 30.11 | 16.95 | 44.96 | 5.01 |
2505 | 2608 | 4.634184 | AGAGAATGCATGAATTCTGTGC | 57.366 | 40.909 | 30.11 | 17.27 | 44.96 | 4.57 |
2506 | 2609 | 5.950883 | ACAAGAGAATGCATGAATTCTGTG | 58.049 | 37.500 | 30.11 | 26.32 | 44.96 | 3.66 |
2507 | 2610 | 6.585695 | AACAAGAGAATGCATGAATTCTGT | 57.414 | 33.333 | 30.11 | 24.20 | 44.96 | 3.41 |
2508 | 2611 | 7.884816 | AAAACAAGAGAATGCATGAATTCTG | 57.115 | 32.000 | 30.11 | 19.78 | 44.96 | 3.02 |
2575 | 2679 | 9.736023 | GTGCAGGAAATTACTTTATAAATGAGG | 57.264 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
2653 | 2760 | 5.355350 | GGACATTTTGAAGGTCAGGACTATG | 59.645 | 44.000 | 7.62 | 0.00 | 43.56 | 2.23 |
2677 | 2784 | 3.815962 | CCTGCAGAGGAATTGATGAGATG | 59.184 | 47.826 | 17.39 | 0.00 | 42.93 | 2.90 |
2678 | 2785 | 3.748027 | GCCTGCAGAGGAATTGATGAGAT | 60.748 | 47.826 | 17.39 | 0.00 | 42.93 | 2.75 |
2688 | 2795 | 0.837691 | TCCAAGAGCCTGCAGAGGAA | 60.838 | 55.000 | 17.39 | 0.00 | 42.93 | 3.36 |
2767 | 2887 | 2.431057 | AGTAGCCCCATGACGTTTAGAG | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2937 | 3060 | 9.658475 | CACGTCTTTCAAAAGTAAAATATGTCA | 57.342 | 29.630 | 2.63 | 0.00 | 37.31 | 3.58 |
2959 | 3086 | 5.106317 | ACAAATGAGTGTTTCACTTTCACGT | 60.106 | 36.000 | 3.91 | 0.00 | 45.44 | 4.49 |
3070 | 3197 | 5.756195 | TGGTGAAGAACTCATTTTCAGTG | 57.244 | 39.130 | 0.00 | 0.00 | 36.14 | 3.66 |
3103 | 3230 | 8.124823 | GTGTAGTAAAAGTTGACAAACTAACCC | 58.875 | 37.037 | 0.00 | 0.00 | 46.15 | 4.11 |
3120 | 3247 | 4.197750 | TCAAAAACGCCCAGTGTAGTAAA | 58.802 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
3126 | 3253 | 2.997303 | GTTTTTCAAAAACGCCCAGTGT | 59.003 | 40.909 | 9.95 | 0.00 | 0.00 | 3.55 |
3136 | 3263 | 9.454859 | ACAAAAGGTCCATATGTTTTTCAAAAA | 57.545 | 25.926 | 1.24 | 0.00 | 0.00 | 1.94 |
3151 | 3278 | 6.323482 | TGAGAATTGATGAAACAAAAGGTCCA | 59.677 | 34.615 | 0.00 | 0.00 | 33.44 | 4.02 |
3308 | 3435 | 3.744660 | ACTTCCCATGTTCAAGTGAGTC | 58.255 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
3423 | 3550 | 3.238108 | TCTTCGAAGTCCTTGATGAGC | 57.762 | 47.619 | 23.85 | 0.00 | 0.00 | 4.26 |
3501 | 3628 | 5.008613 | TGTGTACAGAAAATTGAACTCCAGC | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3507 | 3634 | 6.371809 | TCTGGTGTGTACAGAAAATTGAAC | 57.628 | 37.500 | 0.00 | 0.00 | 41.66 | 3.18 |
3541 | 3676 | 4.843728 | TCCCTTTAGCATGTAGTTCCAAG | 58.156 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
3567 | 3705 | 7.719633 | ACCAAATACTGTGTCAAATAAGTCTGT | 59.280 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
3568 | 3706 | 8.099364 | ACCAAATACTGTGTCAAATAAGTCTG | 57.901 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
3569 | 3707 | 8.691661 | AACCAAATACTGTGTCAAATAAGTCT | 57.308 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
3595 | 3733 | 8.786826 | TGTGAGAAAGAAACAGAAACTCTTAA | 57.213 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
3642 | 3780 | 2.025155 | TGGTTTTAAGTCTTTGCCGCA | 58.975 | 42.857 | 0.00 | 0.00 | 0.00 | 5.69 |
3643 | 3781 | 2.785713 | TGGTTTTAAGTCTTTGCCGC | 57.214 | 45.000 | 0.00 | 0.00 | 0.00 | 6.53 |
3644 | 3782 | 6.443792 | AGTATTTGGTTTTAAGTCTTTGCCG | 58.556 | 36.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3645 | 3783 | 8.072238 | CAAGTATTTGGTTTTAAGTCTTTGCC | 57.928 | 34.615 | 0.00 | 0.00 | 0.00 | 4.52 |
3664 | 3802 | 9.710900 | GAAGGAAAAATGATTTGTTCCAAGTAT | 57.289 | 29.630 | 22.14 | 10.78 | 30.78 | 2.12 |
3665 | 3803 | 8.700051 | TGAAGGAAAAATGATTTGTTCCAAGTA | 58.300 | 29.630 | 22.14 | 10.84 | 30.78 | 2.24 |
3666 | 3804 | 7.563906 | TGAAGGAAAAATGATTTGTTCCAAGT | 58.436 | 30.769 | 22.14 | 13.25 | 30.78 | 3.16 |
3667 | 3805 | 8.436046 | TTGAAGGAAAAATGATTTGTTCCAAG | 57.564 | 30.769 | 22.14 | 0.00 | 30.78 | 3.61 |
3668 | 3806 | 8.798859 | TTTGAAGGAAAAATGATTTGTTCCAA | 57.201 | 26.923 | 22.14 | 12.36 | 30.78 | 3.53 |
3669 | 3807 | 8.838365 | CATTTGAAGGAAAAATGATTTGTTCCA | 58.162 | 29.630 | 22.14 | 10.32 | 44.30 | 3.53 |
3670 | 3808 | 8.839343 | ACATTTGAAGGAAAAATGATTTGTTCC | 58.161 | 29.630 | 16.91 | 16.91 | 44.30 | 3.62 |
3799 | 3940 | 3.059120 | CAGCATCCGCATCTGTTATCAAG | 60.059 | 47.826 | 0.00 | 0.00 | 42.27 | 3.02 |
4013 | 4154 | 2.482721 | ACTGGAGATTAAAAACACGCGG | 59.517 | 45.455 | 12.47 | 1.27 | 0.00 | 6.46 |
4014 | 4155 | 3.185594 | TCACTGGAGATTAAAAACACGCG | 59.814 | 43.478 | 3.53 | 3.53 | 0.00 | 6.01 |
4314 | 5352 | 7.225784 | TGGCAATAAATCTTGTATGTGTTGT | 57.774 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4335 | 5377 | 4.158394 | TCAGTTCAGGCTGAAAAATATGGC | 59.842 | 41.667 | 30.06 | 15.54 | 41.93 | 4.40 |
4444 | 5486 | 6.549364 | AGGATTGTCAAGGTTTGTATTGAACA | 59.451 | 34.615 | 0.00 | 0.00 | 37.19 | 3.18 |
4478 | 5520 | 2.363683 | GGAGCTGAATGAGGAACTTGG | 58.636 | 52.381 | 0.00 | 0.00 | 41.55 | 3.61 |
4666 | 5708 | 0.535780 | CAGAGGTGCCTGCTTTGTGA | 60.536 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4702 | 5744 | 2.159366 | AGCGATACTCACGAAACCAGAG | 60.159 | 50.000 | 0.00 | 0.00 | 35.56 | 3.35 |
4718 | 5760 | 3.054802 | AGGATCTTGAACCTTTCAGCGAT | 60.055 | 43.478 | 0.00 | 3.73 | 41.38 | 4.58 |
4722 | 5764 | 6.000219 | TCTTTCAGGATCTTGAACCTTTCAG | 59.000 | 40.000 | 18.93 | 12.72 | 41.38 | 3.02 |
4723 | 5765 | 5.940617 | TCTTTCAGGATCTTGAACCTTTCA | 58.059 | 37.500 | 18.93 | 3.79 | 36.84 | 2.69 |
4890 | 5932 | 4.335082 | TCCTCAAAATTCATTACACGCG | 57.665 | 40.909 | 3.53 | 3.53 | 0.00 | 6.01 |
5025 | 6076 | 6.199376 | TCAACTTGTACTATGATACAGGGGA | 58.801 | 40.000 | 0.00 | 1.45 | 36.67 | 4.81 |
5026 | 6077 | 6.479972 | TCAACTTGTACTATGATACAGGGG | 57.520 | 41.667 | 0.00 | 0.00 | 36.67 | 4.79 |
5082 | 6133 | 4.033358 | CACATGGCGTAGAAAACATCTCTC | 59.967 | 45.833 | 0.00 | 0.00 | 39.71 | 3.20 |
5179 | 6644 | 2.378445 | GAGAGCTCGAGAGGCTTTTT | 57.622 | 50.000 | 18.75 | 0.00 | 37.67 | 1.94 |
5224 | 6690 | 3.519913 | AGGGAGGGAGTATTTCAGTTCAC | 59.480 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
5225 | 6691 | 3.803340 | AGGGAGGGAGTATTTCAGTTCA | 58.197 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5320 | 6791 | 8.969260 | AGTTGCATCTTGAAGATTACATCATA | 57.031 | 30.769 | 4.67 | 0.00 | 31.32 | 2.15 |
5448 | 6921 | 8.841300 | GGTTCCTTGATTTACAATAGGATCTTC | 58.159 | 37.037 | 0.00 | 0.00 | 37.88 | 2.87 |
5483 | 7343 | 5.862924 | TGTTGCTTGTAGAATCTAACTGC | 57.137 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
5486 | 7346 | 8.178313 | GGAATCTTGTTGCTTGTAGAATCTAAC | 58.822 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
5501 | 7362 | 4.440525 | CCATGAATTCCCGGAATCTTGTTG | 60.441 | 45.833 | 13.24 | 7.18 | 30.29 | 3.33 |
5524 | 7385 | 5.526846 | TGGACTGATGGAATTTTGCAAAAAC | 59.473 | 36.000 | 27.10 | 21.82 | 30.51 | 2.43 |
5533 | 7394 | 8.750515 | AAACAAAATTTGGACTGATGGAATTT | 57.249 | 26.923 | 10.71 | 0.00 | 32.89 | 1.82 |
5534 | 7395 | 7.992033 | TGAAACAAAATTTGGACTGATGGAATT | 59.008 | 29.630 | 10.71 | 0.00 | 34.12 | 2.17 |
5535 | 7396 | 7.507829 | TGAAACAAAATTTGGACTGATGGAAT | 58.492 | 30.769 | 10.71 | 0.00 | 34.12 | 3.01 |
5653 | 7593 | 9.193133 | CGAATGGTAATTACTTGTAGGAGTATG | 57.807 | 37.037 | 15.05 | 0.00 | 32.51 | 2.39 |
5654 | 7594 | 7.871463 | GCGAATGGTAATTACTTGTAGGAGTAT | 59.129 | 37.037 | 15.05 | 0.00 | 32.51 | 2.12 |
5655 | 7595 | 7.147863 | TGCGAATGGTAATTACTTGTAGGAGTA | 60.148 | 37.037 | 15.05 | 0.00 | 0.00 | 2.59 |
5656 | 7596 | 6.047231 | GCGAATGGTAATTACTTGTAGGAGT | 58.953 | 40.000 | 15.05 | 0.00 | 0.00 | 3.85 |
5657 | 7597 | 6.046593 | TGCGAATGGTAATTACTTGTAGGAG | 58.953 | 40.000 | 15.05 | 2.11 | 0.00 | 3.69 |
5720 | 7660 | 2.876581 | ACTTTGCCCAGGTTTAGAAGG | 58.123 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
5724 | 7664 | 1.618343 | CCCAACTTTGCCCAGGTTTAG | 59.382 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
5725 | 7665 | 1.710816 | CCCAACTTTGCCCAGGTTTA | 58.289 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
5729 | 7669 | 1.053835 | AAACCCCAACTTTGCCCAGG | 61.054 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5731 | 7671 | 1.710816 | CTAAACCCCAACTTTGCCCA | 58.289 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5732 | 7672 | 0.973632 | CCTAAACCCCAACTTTGCCC | 59.026 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5735 | 7675 | 1.268625 | GCGACCTAAACCCCAACTTTG | 59.731 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
5736 | 7676 | 1.144298 | AGCGACCTAAACCCCAACTTT | 59.856 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.