Multiple sequence alignment - TraesCS6D01G068300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G068300 chr6D 100.000 5817 0 0 1 5817 34337461 34343277 0.000000e+00 10743
1 TraesCS6D01G068300 chr6D 92.991 214 13 2 394 605 87389542 87389329 1.570000e-80 311
2 TraesCS6D01G068300 chr6B 91.408 3026 141 53 2488 5460 71036033 71038992 0.000000e+00 4037
3 TraesCS6D01G068300 chr6B 89.864 1105 82 14 1390 2488 71034983 71036063 0.000000e+00 1393
4 TraesCS6D01G068300 chr6B 97.471 514 10 1 823 1333 71034335 71034848 0.000000e+00 874
5 TraesCS6D01G068300 chr6B 85.666 293 18 12 5524 5815 71039501 71039770 2.650000e-73 287
6 TraesCS6D01G068300 chr6B 94.505 91 5 0 656 746 704956480 704956570 2.190000e-29 141
7 TraesCS6D01G068300 chr6A 91.347 2681 122 45 2489 5123 38468205 38470821 0.000000e+00 3565
8 TraesCS6D01G068300 chr6A 90.372 1101 79 10 1398 2488 38467151 38468234 0.000000e+00 1421
9 TraesCS6D01G068300 chr6A 96.875 512 14 2 823 1333 38466496 38467006 0.000000e+00 856
10 TraesCS6D01G068300 chr6A 90.855 339 23 6 5128 5460 38471239 38471575 1.150000e-121 448
11 TraesCS6D01G068300 chr6A 93.396 212 13 1 395 605 465626641 465626430 4.380000e-81 313
12 TraesCS6D01G068300 chr6A 86.102 295 15 14 5524 5817 38472021 38472290 1.590000e-75 294
13 TraesCS6D01G068300 chr2B 89.873 395 39 1 1 395 646950826 646951219 1.870000e-139 507
14 TraesCS6D01G068300 chr2B 89.367 395 41 1 1 395 181353733 181354126 4.050000e-136 496
15 TraesCS6D01G068300 chr2B 88.101 395 42 4 1 395 195594785 195595174 1.140000e-126 464
16 TraesCS6D01G068300 chr7A 89.552 402 32 3 1 395 571708858 571709256 8.700000e-138 501
17 TraesCS6D01G068300 chr7A 89.863 365 33 3 32 395 571710549 571710910 3.170000e-127 466
18 TraesCS6D01G068300 chr7A 90.870 230 18 3 382 610 671487469 671487696 7.320000e-79 305
19 TraesCS6D01G068300 chr3B 89.086 394 42 1 2 395 794572045 794572437 6.770000e-134 488
20 TraesCS6D01G068300 chr3B 82.635 167 13 1 596 746 263271171 263271005 3.660000e-27 134
21 TraesCS6D01G068300 chr1A 89.362 376 38 2 1 375 542712595 542712969 6.820000e-129 472
22 TraesCS6D01G068300 chr2A 87.901 405 41 7 2 401 711861047 711860646 2.450000e-128 470
23 TraesCS6D01G068300 chr2A 93.868 212 11 2 395 604 561298754 561298965 9.410000e-83 318
24 TraesCS6D01G068300 chr2A 86.531 245 23 7 362 603 756928015 756928252 1.610000e-65 261
25 TraesCS6D01G068300 chr1D 87.313 402 41 6 2 401 370914846 370914453 8.890000e-123 451
26 TraesCS6D01G068300 chr4D 94.811 212 10 1 395 605 439770757 439770546 4.350000e-86 329
27 TraesCS6D01G068300 chr7D 93.119 218 13 2 392 608 373582252 373582468 9.410000e-83 318
28 TraesCS6D01G068300 chr7D 91.928 223 15 2 386 605 306456225 306456447 5.660000e-80 309
29 TraesCS6D01G068300 chr7D 86.614 127 12 2 624 745 560755600 560755726 1.020000e-27 135
30 TraesCS6D01G068300 chr3A 92.070 227 16 2 380 605 621317496 621317721 9.410000e-83 318
31 TraesCS6D01G068300 chr3A 89.091 110 8 1 622 731 656109152 656109047 3.660000e-27 134
32 TraesCS6D01G068300 chr5A 91.556 225 18 1 382 605 44284878 44285102 5.660000e-80 309
33 TraesCS6D01G068300 chr7B 85.161 155 11 6 600 743 85624326 85624479 1.310000e-31 148
34 TraesCS6D01G068300 chr7B 81.548 168 14 2 595 746 20046718 20046884 7.920000e-24 122
35 TraesCS6D01G068300 chr3D 87.692 130 12 1 602 731 520722840 520722715 1.310000e-31 148
36 TraesCS6D01G068300 chrUn 84.277 159 10 6 603 746 100780123 100779965 2.190000e-29 141
37 TraesCS6D01G068300 chrUn 82.432 148 22 2 602 746 100229728 100229582 6.120000e-25 126
38 TraesCS6D01G068300 chr4B 84.028 144 21 1 603 746 10562717 10562576 2.830000e-28 137
39 TraesCS6D01G068300 chr2D 84.138 145 18 4 603 742 372321100 372320956 1.020000e-27 135
40 TraesCS6D01G068300 chr1B 79.558 181 16 6 584 746 488538920 488539097 6.160000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G068300 chr6D 34337461 34343277 5816 False 10743.00 10743 100.00000 1 5817 1 chr6D.!!$F1 5816
1 TraesCS6D01G068300 chr6B 71034335 71039770 5435 False 1647.75 4037 91.10225 823 5815 4 chr6B.!!$F2 4992
2 TraesCS6D01G068300 chr6A 38466496 38472290 5794 False 1316.80 3565 91.11020 823 5817 5 chr6A.!!$F1 4994
3 TraesCS6D01G068300 chr7A 571708858 571710910 2052 False 483.50 501 89.70750 1 395 2 chr7A.!!$F2 394

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
753 761 0.107654 GAACGGAGGGAGGTTGGATG 60.108 60.0 0.00 0.00 0.00 3.51 F
772 780 0.112412 GAAGGGCTGGTGGGAAGAAA 59.888 55.0 0.00 0.00 0.00 2.52 F
774 782 0.113190 AGGGCTGGTGGGAAGAAAAG 59.887 55.0 0.00 0.00 0.00 2.27 F
775 783 0.178961 GGGCTGGTGGGAAGAAAAGT 60.179 55.0 0.00 0.00 0.00 2.66 F
1347 1359 0.250770 AAGGTGACCGAGGGCTTTTC 60.251 55.0 0.00 0.00 0.00 2.29 F
1927 2022 1.117150 CTGGCCTGGCTGCAATATTT 58.883 50.0 19.68 0.00 0.00 1.40 F
2421 2524 1.495878 CTACCATGCGCATCTCTCAC 58.504 55.0 22.51 0.00 0.00 3.51 F
3647 3785 0.387239 AAAGAAAGCGATGTTGCGGC 60.387 50.0 0.00 0.00 40.67 6.53 F
3650 3788 0.662970 GAAAGCGATGTTGCGGCAAA 60.663 50.0 18.23 8.41 40.67 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2688 2795 0.837691 TCCAAGAGCCTGCAGAGGAA 60.838 55.000 17.39 0.0 42.93 3.36 R
2767 2887 2.431057 AGTAGCCCCATGACGTTTAGAG 59.569 50.000 0.00 0.0 0.00 2.43 R
2937 3060 9.658475 CACGTCTTTCAAAAGTAAAATATGTCA 57.342 29.630 2.63 0.0 37.31 3.58 R
2959 3086 5.106317 ACAAATGAGTGTTTCACTTTCACGT 60.106 36.000 3.91 0.0 45.44 4.49 R
3126 3253 2.997303 GTTTTTCAAAAACGCCCAGTGT 59.003 40.909 9.95 0.0 0.00 3.55 R
3642 3780 2.025155 TGGTTTTAAGTCTTTGCCGCA 58.975 42.857 0.00 0.0 0.00 5.69 R
4478 5520 2.363683 GGAGCTGAATGAGGAACTTGG 58.636 52.381 0.00 0.0 41.55 3.61 R
4666 5708 0.535780 CAGAGGTGCCTGCTTTGTGA 60.536 55.000 0.00 0.0 0.00 3.58 R
5732 7672 0.973632 CCTAAACCCCAACTTTGCCC 59.026 55.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.565305 GATCTCATCTCGTGTGGTGC 58.435 55.000 0.00 0.00 0.00 5.01
33 34 0.453793 TGTGGTGCCGTCTTTGTTTG 59.546 50.000 0.00 0.00 0.00 2.93
34 35 0.248866 GTGGTGCCGTCTTTGTTTGG 60.249 55.000 0.00 0.00 0.00 3.28
35 36 1.362355 GGTGCCGTCTTTGTTTGGG 59.638 57.895 0.00 0.00 0.00 4.12
36 37 1.362355 GTGCCGTCTTTGTTTGGGG 59.638 57.895 0.00 0.00 0.00 4.96
37 38 1.830408 TGCCGTCTTTGTTTGGGGG 60.830 57.895 0.00 0.00 0.00 5.40
38 39 1.529713 GCCGTCTTTGTTTGGGGGA 60.530 57.895 0.00 0.00 0.00 4.81
39 40 1.110518 GCCGTCTTTGTTTGGGGGAA 61.111 55.000 0.00 0.00 0.00 3.97
41 42 1.477923 CCGTCTTTGTTTGGGGGAAGA 60.478 52.381 0.00 0.00 0.00 2.87
42 43 2.514803 CGTCTTTGTTTGGGGGAAGAT 58.485 47.619 0.00 0.00 31.52 2.40
56 64 3.348119 GGGAAGATGAAGGTCCAAGAAC 58.652 50.000 0.00 0.00 32.70 3.01
86 94 1.152777 CTTGTGGGTGGCAGTTCCA 60.153 57.895 0.00 0.00 44.18 3.53
99 107 2.023673 CAGTTCCAGTGTTTTGCCTCA 58.976 47.619 0.00 0.00 0.00 3.86
130 138 2.281345 CATGGAGCGGATCTGGGC 60.281 66.667 3.14 0.00 0.00 5.36
144 152 2.747855 GGGCTTTGAGGAGCACGG 60.748 66.667 0.00 0.00 44.49 4.94
173 181 4.147322 GGTCGATGCGCCACAACG 62.147 66.667 4.18 3.60 45.14 4.10
180 188 1.233950 ATGCGCCACAACGACAATGA 61.234 50.000 4.18 0.00 34.06 2.57
187 195 0.951558 ACAACGACAATGACCTTGCC 59.048 50.000 0.00 0.00 38.50 4.52
191 199 3.039202 GACAATGACCTTGCCGGCG 62.039 63.158 23.90 10.49 38.50 6.46
207 215 2.268076 GCGGCAGGCCTTTTCTTCA 61.268 57.895 0.00 0.00 34.80 3.02
244 252 0.953471 TGGGCGATGGTGTTTCTTCG 60.953 55.000 0.00 0.00 37.37 3.79
245 253 0.953960 GGGCGATGGTGTTTCTTCGT 60.954 55.000 0.00 0.00 36.89 3.85
250 258 1.993370 GATGGTGTTTCTTCGTCTCCG 59.007 52.381 0.00 0.00 0.00 4.63
320 328 6.042143 TGGAGTTTTCTTGCAAATGTTTCTC 58.958 36.000 0.00 4.84 0.00 2.87
340 348 4.039245 TCTCGACATGTGTCCTCTCTTTTT 59.961 41.667 1.15 0.00 41.86 1.94
401 409 8.997621 TGACATCTGTTTAATGGTACTAGAAC 57.002 34.615 0.00 0.00 0.00 3.01
402 410 8.590204 TGACATCTGTTTAATGGTACTAGAACA 58.410 33.333 0.00 0.00 0.00 3.18
403 411 9.431887 GACATCTGTTTAATGGTACTAGAACAA 57.568 33.333 0.00 0.00 0.00 2.83
404 412 9.959721 ACATCTGTTTAATGGTACTAGAACAAT 57.040 29.630 0.00 0.00 0.00 2.71
406 414 8.263940 TCTGTTTAATGGTACTAGAACAATGC 57.736 34.615 0.00 0.00 0.00 3.56
407 415 7.335924 TCTGTTTAATGGTACTAGAACAATGCC 59.664 37.037 0.00 0.00 0.00 4.40
408 416 6.376018 TGTTTAATGGTACTAGAACAATGCCC 59.624 38.462 0.00 0.00 0.00 5.36
409 417 2.684001 TGGTACTAGAACAATGCCCG 57.316 50.000 0.00 0.00 0.00 6.13
410 418 1.903860 TGGTACTAGAACAATGCCCGT 59.096 47.619 0.00 0.00 0.00 5.28
411 419 2.277084 GGTACTAGAACAATGCCCGTG 58.723 52.381 0.00 0.00 0.00 4.94
412 420 1.664151 GTACTAGAACAATGCCCGTGC 59.336 52.381 0.00 0.00 38.26 5.34
413 421 1.019278 ACTAGAACAATGCCCGTGCG 61.019 55.000 0.00 0.00 41.78 5.34
414 422 1.004320 TAGAACAATGCCCGTGCGT 60.004 52.632 0.00 0.00 41.78 5.24
419 427 3.600694 AATGCCCGTGCGTTGCAA 61.601 55.556 0.00 0.00 44.90 4.08
420 428 3.839642 AATGCCCGTGCGTTGCAAC 62.840 57.895 19.89 19.89 44.90 4.17
439 447 9.216117 GTTGCAACGGGATATAAATATTCTAGT 57.784 33.333 14.90 0.00 0.00 2.57
458 466 8.767478 TTCTAGTATGTTAGCTTGTGGTTTAC 57.233 34.615 0.00 0.00 0.00 2.01
459 467 7.325694 TCTAGTATGTTAGCTTGTGGTTTACC 58.674 38.462 0.00 0.00 0.00 2.85
460 468 6.123045 AGTATGTTAGCTTGTGGTTTACCT 57.877 37.500 0.00 0.00 36.82 3.08
461 469 7.248743 AGTATGTTAGCTTGTGGTTTACCTA 57.751 36.000 0.00 0.00 36.82 3.08
462 470 7.858498 AGTATGTTAGCTTGTGGTTTACCTAT 58.142 34.615 0.00 0.00 36.82 2.57
463 471 7.985752 AGTATGTTAGCTTGTGGTTTACCTATC 59.014 37.037 0.00 0.00 36.82 2.08
464 472 6.116711 TGTTAGCTTGTGGTTTACCTATCA 57.883 37.500 0.00 0.00 36.82 2.15
465 473 6.535540 TGTTAGCTTGTGGTTTACCTATCAA 58.464 36.000 0.00 3.32 36.82 2.57
466 474 7.172342 TGTTAGCTTGTGGTTTACCTATCAAT 58.828 34.615 0.00 0.00 36.82 2.57
467 475 8.322828 TGTTAGCTTGTGGTTTACCTATCAATA 58.677 33.333 0.00 0.00 36.82 1.90
468 476 9.169592 GTTAGCTTGTGGTTTACCTATCAATAA 57.830 33.333 0.00 0.00 36.82 1.40
469 477 9.914834 TTAGCTTGTGGTTTACCTATCAATAAT 57.085 29.630 0.00 0.00 36.82 1.28
471 479 9.914834 AGCTTGTGGTTTACCTATCAATAATAA 57.085 29.630 0.00 0.00 36.82 1.40
475 483 8.779303 TGTGGTTTACCTATCAATAATAATGCG 58.221 33.333 0.00 0.00 36.82 4.73
476 484 8.995220 GTGGTTTACCTATCAATAATAATGCGA 58.005 33.333 0.00 0.00 36.82 5.10
477 485 9.733556 TGGTTTACCTATCAATAATAATGCGAT 57.266 29.630 0.00 0.00 36.82 4.58
498 506 9.631452 TGCGATTTTGTAAATAAATGTTCATCA 57.369 25.926 0.00 0.00 0.00 3.07
509 517 8.915871 AATAAATGTTCATCAAATTCTGACCG 57.084 30.769 0.00 0.00 36.69 4.79
510 518 5.964958 AATGTTCATCAAATTCTGACCGT 57.035 34.783 0.00 0.00 36.69 4.83
511 519 4.747540 TGTTCATCAAATTCTGACCGTG 57.252 40.909 0.00 0.00 36.69 4.94
512 520 4.384940 TGTTCATCAAATTCTGACCGTGA 58.615 39.130 0.00 0.00 36.69 4.35
513 521 4.819088 TGTTCATCAAATTCTGACCGTGAA 59.181 37.500 0.00 0.00 36.69 3.18
514 522 5.473162 TGTTCATCAAATTCTGACCGTGAAT 59.527 36.000 0.00 0.00 34.60 2.57
515 523 6.016360 TGTTCATCAAATTCTGACCGTGAATT 60.016 34.615 0.00 0.00 43.44 2.17
516 524 7.174080 TGTTCATCAAATTCTGACCGTGAATTA 59.826 33.333 0.00 0.00 41.54 1.40
517 525 7.072177 TCATCAAATTCTGACCGTGAATTAC 57.928 36.000 0.00 0.00 41.54 1.89
518 526 5.873179 TCAAATTCTGACCGTGAATTACC 57.127 39.130 0.00 0.00 41.54 2.85
519 527 5.556915 TCAAATTCTGACCGTGAATTACCT 58.443 37.500 0.00 0.00 41.54 3.08
520 528 6.001460 TCAAATTCTGACCGTGAATTACCTT 58.999 36.000 0.00 0.00 41.54 3.50
521 529 7.162761 TCAAATTCTGACCGTGAATTACCTTA 58.837 34.615 0.00 0.00 41.54 2.69
522 530 7.827236 TCAAATTCTGACCGTGAATTACCTTAT 59.173 33.333 0.00 0.00 41.54 1.73
523 531 9.104965 CAAATTCTGACCGTGAATTACCTTATA 57.895 33.333 0.00 0.00 41.54 0.98
524 532 9.847224 AAATTCTGACCGTGAATTACCTTATAT 57.153 29.630 0.00 0.00 41.54 0.86
525 533 9.847224 AATTCTGACCGTGAATTACCTTATATT 57.153 29.630 0.00 0.00 40.88 1.28
526 534 9.847224 ATTCTGACCGTGAATTACCTTATATTT 57.153 29.630 0.00 0.00 30.84 1.40
527 535 9.675464 TTCTGACCGTGAATTACCTTATATTTT 57.325 29.630 0.00 0.00 0.00 1.82
528 536 9.104965 TCTGACCGTGAATTACCTTATATTTTG 57.895 33.333 0.00 0.00 0.00 2.44
529 537 9.104965 CTGACCGTGAATTACCTTATATTTTGA 57.895 33.333 0.00 0.00 0.00 2.69
530 538 9.621629 TGACCGTGAATTACCTTATATTTTGAT 57.378 29.630 0.00 0.00 0.00 2.57
581 589 8.934023 TGAAATTGGTTCAGAAGGTAAGTAAT 57.066 30.769 0.00 0.00 41.47 1.89
582 590 9.362151 TGAAATTGGTTCAGAAGGTAAGTAATT 57.638 29.630 0.00 0.00 41.47 1.40
629 637 9.047947 ACTCCCTGTGTTTCTAAATATAAGTCT 57.952 33.333 0.00 0.00 0.00 3.24
630 638 9.892130 CTCCCTGTGTTTCTAAATATAAGTCTT 57.108 33.333 0.00 0.00 0.00 3.01
649 657 7.118496 AGTCTTTGTAGAGATTCCACTATGG 57.882 40.000 0.00 0.00 39.43 2.74
650 658 6.897966 AGTCTTTGTAGAGATTCCACTATGGA 59.102 38.462 0.00 0.00 46.61 3.41
664 672 7.526142 TCCACTATGGACTACATGAATCTAC 57.474 40.000 0.00 0.00 42.67 2.59
665 673 7.066781 TCCACTATGGACTACATGAATCTACA 58.933 38.462 0.00 0.00 42.67 2.74
666 674 7.730332 TCCACTATGGACTACATGAATCTACAT 59.270 37.037 0.00 0.00 42.67 2.29
667 675 8.370940 CCACTATGGACTACATGAATCTACATT 58.629 37.037 0.00 0.00 40.96 2.71
668 676 9.416794 CACTATGGACTACATGAATCTACATTC 57.583 37.037 0.00 0.00 40.82 2.67
669 677 9.373450 ACTATGGACTACATGAATCTACATTCT 57.627 33.333 0.00 0.00 40.82 2.40
691 699 7.889589 TCTAAAATGCATCTACATACATCCG 57.110 36.000 0.00 0.00 0.00 4.18
692 700 7.441836 TCTAAAATGCATCTACATACATCCGT 58.558 34.615 0.00 0.00 0.00 4.69
693 701 8.581578 TCTAAAATGCATCTACATACATCCGTA 58.418 33.333 0.00 0.00 0.00 4.02
694 702 9.371136 CTAAAATGCATCTACATACATCCGTAT 57.629 33.333 0.00 0.00 38.96 3.06
702 710 3.744238 CATACATCCGTATGTGGTCCA 57.256 47.619 3.56 0.00 46.70 4.02
703 711 4.271696 CATACATCCGTATGTGGTCCAT 57.728 45.455 3.56 0.00 46.70 3.41
704 712 5.400066 CATACATCCGTATGTGGTCCATA 57.600 43.478 3.56 0.00 46.70 2.74
705 713 5.789521 CATACATCCGTATGTGGTCCATAA 58.210 41.667 3.56 0.00 46.70 1.90
706 714 4.974645 ACATCCGTATGTGGTCCATAAT 57.025 40.909 0.00 0.00 44.79 1.28
707 715 7.552459 CATACATCCGTATGTGGTCCATAATA 58.448 38.462 3.56 0.00 46.70 0.98
708 716 6.428083 ACATCCGTATGTGGTCCATAATAA 57.572 37.500 0.00 0.00 44.79 1.40
709 717 6.833041 ACATCCGTATGTGGTCCATAATAAA 58.167 36.000 0.00 0.00 44.79 1.40
710 718 7.284074 ACATCCGTATGTGGTCCATAATAAAA 58.716 34.615 0.00 0.00 44.79 1.52
711 719 7.942341 ACATCCGTATGTGGTCCATAATAAAAT 59.058 33.333 0.00 0.00 44.79 1.82
712 720 7.972832 TCCGTATGTGGTCCATAATAAAATC 57.027 36.000 0.00 0.00 37.77 2.17
713 721 7.741785 TCCGTATGTGGTCCATAATAAAATCT 58.258 34.615 0.00 0.00 37.77 2.40
714 722 7.876068 TCCGTATGTGGTCCATAATAAAATCTC 59.124 37.037 0.00 0.00 37.77 2.75
715 723 7.878127 CCGTATGTGGTCCATAATAAAATCTCT 59.122 37.037 0.00 0.00 37.77 3.10
716 724 9.923143 CGTATGTGGTCCATAATAAAATCTCTA 57.077 33.333 0.00 0.00 37.77 2.43
743 751 8.919777 AAAGATTTATATTTAGGAACGGAGGG 57.080 34.615 0.00 0.00 0.00 4.30
744 752 7.867160 AGATTTATATTTAGGAACGGAGGGA 57.133 36.000 0.00 0.00 0.00 4.20
745 753 7.908453 AGATTTATATTTAGGAACGGAGGGAG 58.092 38.462 0.00 0.00 0.00 4.30
746 754 6.429521 TTTATATTTAGGAACGGAGGGAGG 57.570 41.667 0.00 0.00 0.00 4.30
747 755 2.265526 ATTTAGGAACGGAGGGAGGT 57.734 50.000 0.00 0.00 0.00 3.85
748 756 2.034436 TTTAGGAACGGAGGGAGGTT 57.966 50.000 0.00 0.00 0.00 3.50
749 757 1.272807 TTAGGAACGGAGGGAGGTTG 58.727 55.000 0.00 0.00 0.00 3.77
750 758 0.616679 TAGGAACGGAGGGAGGTTGG 60.617 60.000 0.00 0.00 0.00 3.77
751 759 1.916777 GGAACGGAGGGAGGTTGGA 60.917 63.158 0.00 0.00 0.00 3.53
752 760 1.272554 GGAACGGAGGGAGGTTGGAT 61.273 60.000 0.00 0.00 0.00 3.41
753 761 0.107654 GAACGGAGGGAGGTTGGATG 60.108 60.000 0.00 0.00 0.00 3.51
754 762 0.546747 AACGGAGGGAGGTTGGATGA 60.547 55.000 0.00 0.00 0.00 2.92
755 763 0.546747 ACGGAGGGAGGTTGGATGAA 60.547 55.000 0.00 0.00 0.00 2.57
756 764 0.179000 CGGAGGGAGGTTGGATGAAG 59.821 60.000 0.00 0.00 0.00 3.02
757 765 0.548510 GGAGGGAGGTTGGATGAAGG 59.451 60.000 0.00 0.00 0.00 3.46
758 766 0.548510 GAGGGAGGTTGGATGAAGGG 59.451 60.000 0.00 0.00 0.00 3.95
759 767 1.076705 GGGAGGTTGGATGAAGGGC 60.077 63.158 0.00 0.00 0.00 5.19
760 768 1.575447 GGGAGGTTGGATGAAGGGCT 61.575 60.000 0.00 0.00 0.00 5.19
761 769 0.394899 GGAGGTTGGATGAAGGGCTG 60.395 60.000 0.00 0.00 0.00 4.85
762 770 0.394899 GAGGTTGGATGAAGGGCTGG 60.395 60.000 0.00 0.00 0.00 4.85
763 771 1.142688 AGGTTGGATGAAGGGCTGGT 61.143 55.000 0.00 0.00 0.00 4.00
764 772 0.967380 GGTTGGATGAAGGGCTGGTG 60.967 60.000 0.00 0.00 0.00 4.17
765 773 0.967380 GTTGGATGAAGGGCTGGTGG 60.967 60.000 0.00 0.00 0.00 4.61
766 774 2.153898 TTGGATGAAGGGCTGGTGGG 62.154 60.000 0.00 0.00 0.00 4.61
767 775 2.308722 GGATGAAGGGCTGGTGGGA 61.309 63.158 0.00 0.00 0.00 4.37
768 776 1.691219 GATGAAGGGCTGGTGGGAA 59.309 57.895 0.00 0.00 0.00 3.97
769 777 0.394899 GATGAAGGGCTGGTGGGAAG 60.395 60.000 0.00 0.00 0.00 3.46
770 778 0.846427 ATGAAGGGCTGGTGGGAAGA 60.846 55.000 0.00 0.00 0.00 2.87
771 779 1.065410 TGAAGGGCTGGTGGGAAGAA 61.065 55.000 0.00 0.00 0.00 2.52
772 780 0.112412 GAAGGGCTGGTGGGAAGAAA 59.888 55.000 0.00 0.00 0.00 2.52
773 781 0.560688 AAGGGCTGGTGGGAAGAAAA 59.439 50.000 0.00 0.00 0.00 2.29
774 782 0.113190 AGGGCTGGTGGGAAGAAAAG 59.887 55.000 0.00 0.00 0.00 2.27
775 783 0.178961 GGGCTGGTGGGAAGAAAAGT 60.179 55.000 0.00 0.00 0.00 2.66
776 784 0.961753 GGCTGGTGGGAAGAAAAGTG 59.038 55.000 0.00 0.00 0.00 3.16
777 785 1.478654 GGCTGGTGGGAAGAAAAGTGA 60.479 52.381 0.00 0.00 0.00 3.41
778 786 2.306847 GCTGGTGGGAAGAAAAGTGAA 58.693 47.619 0.00 0.00 0.00 3.18
779 787 2.693074 GCTGGTGGGAAGAAAAGTGAAA 59.307 45.455 0.00 0.00 0.00 2.69
780 788 3.321968 GCTGGTGGGAAGAAAAGTGAAAT 59.678 43.478 0.00 0.00 0.00 2.17
781 789 4.797275 GCTGGTGGGAAGAAAAGTGAAATG 60.797 45.833 0.00 0.00 0.00 2.32
782 790 4.541705 TGGTGGGAAGAAAAGTGAAATGA 58.458 39.130 0.00 0.00 0.00 2.57
783 791 4.584325 TGGTGGGAAGAAAAGTGAAATGAG 59.416 41.667 0.00 0.00 0.00 2.90
784 792 4.021981 GGTGGGAAGAAAAGTGAAATGAGG 60.022 45.833 0.00 0.00 0.00 3.86
785 793 4.827284 GTGGGAAGAAAAGTGAAATGAGGA 59.173 41.667 0.00 0.00 0.00 3.71
786 794 5.048434 GTGGGAAGAAAAGTGAAATGAGGAG 60.048 44.000 0.00 0.00 0.00 3.69
787 795 5.163099 TGGGAAGAAAAGTGAAATGAGGAGA 60.163 40.000 0.00 0.00 0.00 3.71
788 796 5.414144 GGGAAGAAAAGTGAAATGAGGAGAG 59.586 44.000 0.00 0.00 0.00 3.20
795 803 6.531503 AAGTGAAATGAGGAGAGATACGAA 57.468 37.500 0.00 0.00 0.00 3.85
802 810 9.751542 GAAATGAGGAGAGATACGAAATTTCTA 57.248 33.333 15.92 7.95 31.80 2.10
842 850 2.280552 TAGGTCCCACACGTCAGCC 61.281 63.158 0.00 0.00 0.00 4.85
885 893 1.077429 GGTGGTGATCAGGGCTTCC 60.077 63.158 0.00 0.00 0.00 3.46
1302 1314 4.500116 GCCGTCCTCAGCGACCTC 62.500 72.222 0.00 0.00 0.00 3.85
1333 1345 1.213013 CTCGACTGGGACGAAGGTG 59.787 63.158 0.00 0.00 39.23 4.00
1334 1346 1.228337 TCGACTGGGACGAAGGTGA 60.228 57.895 0.00 0.00 36.84 4.02
1335 1347 1.080705 CGACTGGGACGAAGGTGAC 60.081 63.158 0.00 0.00 0.00 3.67
1336 1348 1.292541 GACTGGGACGAAGGTGACC 59.707 63.158 0.00 0.00 0.00 4.02
1338 1350 2.203523 TGGGACGAAGGTGACCGA 60.204 61.111 0.00 0.00 0.00 4.69
1339 1351 2.214181 CTGGGACGAAGGTGACCGAG 62.214 65.000 0.00 0.00 0.00 4.63
1341 1353 2.572284 GACGAAGGTGACCGAGGG 59.428 66.667 0.00 0.00 0.00 4.30
1343 1355 3.382832 CGAAGGTGACCGAGGGCT 61.383 66.667 0.00 0.00 0.00 5.19
1344 1356 2.943978 CGAAGGTGACCGAGGGCTT 61.944 63.158 0.00 0.00 0.00 4.35
1345 1357 1.375326 GAAGGTGACCGAGGGCTTT 59.625 57.895 0.00 0.00 0.00 3.51
1347 1359 0.250770 AAGGTGACCGAGGGCTTTTC 60.251 55.000 0.00 0.00 0.00 2.29
1361 1418 4.020128 AGGGCTTTTCGATGACTAGAGTTT 60.020 41.667 0.00 0.00 0.00 2.66
1384 1441 4.993029 AGAACGAATTCCTACTCTGGAG 57.007 45.455 0.00 0.00 37.43 3.86
1386 1443 4.399934 AGAACGAATTCCTACTCTGGAGTC 59.600 45.833 6.52 0.00 37.94 3.36
1389 1446 3.067461 CGAATTCCTACTCTGGAGTCTGG 59.933 52.174 6.52 10.53 42.54 3.86
1390 1447 4.282496 GAATTCCTACTCTGGAGTCTGGA 58.718 47.826 15.98 15.98 42.54 3.86
1395 1487 3.131933 CCTACTCTGGAGTCTGGATTGTG 59.868 52.174 6.52 0.00 42.54 3.33
1396 1488 2.614259 ACTCTGGAGTCTGGATTGTGT 58.386 47.619 0.00 0.00 36.92 3.72
1405 1497 5.163713 GGAGTCTGGATTGTGTTTGCTTATC 60.164 44.000 0.00 0.00 0.00 1.75
1406 1498 4.702131 AGTCTGGATTGTGTTTGCTTATCC 59.298 41.667 0.00 0.00 36.22 2.59
1407 1499 4.016444 TCTGGATTGTGTTTGCTTATCCC 58.984 43.478 0.00 0.00 35.06 3.85
1412 1504 1.271108 TGTGTTTGCTTATCCCGCTGA 60.271 47.619 0.00 0.00 0.00 4.26
1418 1510 1.211703 TGCTTATCCCGCTGAATTGGA 59.788 47.619 0.00 0.00 0.00 3.53
1430 1522 5.006746 CCGCTGAATTGGAGTAGTTAATCAC 59.993 44.000 0.00 0.00 0.00 3.06
1431 1523 5.812642 CGCTGAATTGGAGTAGTTAATCACT 59.187 40.000 0.00 0.00 39.87 3.41
1432 1524 6.978659 CGCTGAATTGGAGTAGTTAATCACTA 59.021 38.462 0.00 0.00 36.88 2.74
1433 1525 7.168302 CGCTGAATTGGAGTAGTTAATCACTAG 59.832 40.741 0.00 0.00 38.77 2.57
1434 1526 8.198109 GCTGAATTGGAGTAGTTAATCACTAGA 58.802 37.037 0.00 0.00 38.77 2.43
1435 1527 9.743057 CTGAATTGGAGTAGTTAATCACTAGAG 57.257 37.037 0.00 0.00 38.77 2.43
1436 1528 9.256228 TGAATTGGAGTAGTTAATCACTAGAGT 57.744 33.333 0.00 0.00 38.77 3.24
1463 1555 6.942576 AGTAGAATCTGTTACCTGCAAATTGT 59.057 34.615 0.00 0.00 0.00 2.71
1474 1566 3.922240 CCTGCAAATTGTTGTGCTCATAC 59.078 43.478 1.83 0.00 41.48 2.39
1529 1621 3.400054 GGCCCTTACCGCCAGTCT 61.400 66.667 0.00 0.00 46.27 3.24
1606 1698 3.361794 TTATCGCTGCTTCTGCTCTAG 57.638 47.619 0.00 0.00 40.48 2.43
1619 1711 6.629291 GCTTCTGCTCTAGTGAGGTATCTTTT 60.629 42.308 0.00 0.00 40.53 2.27
1641 1733 1.277580 CCCCTCTCCTGACCTGCATT 61.278 60.000 0.00 0.00 0.00 3.56
1658 1750 3.258872 TGCATTTTTGCCTGCTTAGTGAT 59.741 39.130 0.00 0.00 39.16 3.06
1772 1864 7.903995 TCCTCAAATGAATTATTTTGGTTGC 57.096 32.000 10.89 0.00 36.87 4.17
1893 1986 5.010112 TGAACAATTTGAGGGCGTTATTTCA 59.990 36.000 2.79 0.00 0.00 2.69
1927 2022 1.117150 CTGGCCTGGCTGCAATATTT 58.883 50.000 19.68 0.00 0.00 1.40
1931 2026 2.035066 GGCCTGGCTGCAATATTTACTG 59.965 50.000 19.68 0.00 0.00 2.74
1959 2054 6.512342 AATAGTAGCTCGTCTAACAAGTGT 57.488 37.500 0.00 0.00 0.00 3.55
1967 2062 7.544622 AGCTCGTCTAACAAGTGTTATTGATA 58.455 34.615 4.43 0.00 39.49 2.15
1971 2066 9.701098 TCGTCTAACAAGTGTTATTGATACTTT 57.299 29.630 4.43 0.00 37.58 2.66
1993 2088 7.780271 ACTTTAGGAACTTGAGAAAATGAAGGT 59.220 33.333 0.00 0.00 41.75 3.50
2135 2230 5.684813 GCCAAAGGAAGGTTCACTGAAAATT 60.685 40.000 0.00 0.00 0.00 1.82
2180 2275 6.942576 AGGTAATGACATAAAGTGTTTGAGCT 59.057 34.615 0.00 0.00 42.36 4.09
2185 2280 6.611381 TGACATAAAGTGTTTGAGCTTATGC 58.389 36.000 0.00 0.00 42.36 3.14
2202 2303 7.026631 GCTTATGCTTTCACATTACCATACA 57.973 36.000 0.00 0.00 36.03 2.29
2204 2305 8.137437 GCTTATGCTTTCACATTACCATACATT 58.863 33.333 0.00 0.00 36.03 2.71
2211 2312 5.810095 TCACATTACCATACATTCACACCA 58.190 37.500 0.00 0.00 0.00 4.17
2213 2314 6.542005 TCACATTACCATACATTCACACCATC 59.458 38.462 0.00 0.00 0.00 3.51
2218 2319 6.061022 ACCATACATTCACACCATCAACTA 57.939 37.500 0.00 0.00 0.00 2.24
2230 2331 7.041721 CACACCATCAACTACTCTTATGCTTA 58.958 38.462 0.00 0.00 0.00 3.09
2240 2341 7.638134 ACTACTCTTATGCTTACTACGTTAGC 58.362 38.462 0.00 0.00 38.47 3.09
2249 2350 7.372451 TGCTTACTACGTTAGCAATTCAAAT 57.628 32.000 5.35 0.00 43.54 2.32
2250 2351 8.481974 TGCTTACTACGTTAGCAATTCAAATA 57.518 30.769 5.35 0.00 43.54 1.40
2284 2387 6.581370 GTGTGTCGCACAATGATATACATAC 58.419 40.000 11.68 0.00 46.28 2.39
2382 2485 2.289565 GGCCAGCCAGTGTATAACTTC 58.710 52.381 3.12 0.00 36.83 3.01
2388 2491 4.997395 CAGCCAGTGTATAACTTCTGTGTT 59.003 41.667 0.00 0.00 36.83 3.32
2391 2494 5.061808 GCCAGTGTATAACTTCTGTGTTACG 59.938 44.000 0.00 0.00 36.83 3.18
2421 2524 1.495878 CTACCATGCGCATCTCTCAC 58.504 55.000 22.51 0.00 0.00 3.51
2434 2537 5.533482 GCATCTCTCACGTTATCAGGTAAT 58.467 41.667 0.00 0.00 0.00 1.89
2436 2539 6.735968 GCATCTCTCACGTTATCAGGTAATGA 60.736 42.308 0.00 0.00 43.70 2.57
2440 2543 7.759886 TCTCTCACGTTATCAGGTAATGAAAAG 59.240 37.037 0.00 0.00 42.53 2.27
2477 2580 4.943705 GTCCTTACTTTTGATCATCTGGCA 59.056 41.667 0.00 0.00 0.00 4.92
2479 2582 4.946157 CCTTACTTTTGATCATCTGGCACT 59.054 41.667 0.00 0.00 0.00 4.40
2488 2591 5.198207 TGATCATCTGGCACTGAATTCATT 58.802 37.500 8.96 0.00 40.32 2.57
2489 2592 5.655090 TGATCATCTGGCACTGAATTCATTT 59.345 36.000 8.96 0.00 40.32 2.32
2491 2594 6.441093 TCATCTGGCACTGAATTCATTTAC 57.559 37.500 8.96 1.27 40.32 2.01
2494 2597 6.258230 TCTGGCACTGAATTCATTTACTTG 57.742 37.500 8.96 0.00 32.07 3.16
2495 2598 5.769662 TCTGGCACTGAATTCATTTACTTGT 59.230 36.000 8.96 0.00 32.07 3.16
2496 2599 5.771469 TGGCACTGAATTCATTTACTTGTG 58.229 37.500 8.96 12.25 0.00 3.33
2497 2600 5.163513 GGCACTGAATTCATTTACTTGTGG 58.836 41.667 18.06 3.93 0.00 4.17
2498 2601 4.622740 GCACTGAATTCATTTACTTGTGGC 59.377 41.667 18.06 10.15 0.00 5.01
2499 2602 5.163513 CACTGAATTCATTTACTTGTGGCC 58.836 41.667 8.96 0.00 0.00 5.36
2500 2603 4.832266 ACTGAATTCATTTACTTGTGGCCA 59.168 37.500 8.96 0.00 0.00 5.36
2501 2604 5.481473 ACTGAATTCATTTACTTGTGGCCAT 59.519 36.000 9.72 0.00 0.00 4.40
2502 2605 5.964758 TGAATTCATTTACTTGTGGCCATC 58.035 37.500 9.72 3.12 0.00 3.51
2503 2606 5.716228 TGAATTCATTTACTTGTGGCCATCT 59.284 36.000 9.72 0.00 0.00 2.90
2504 2607 5.587388 ATTCATTTACTTGTGGCCATCTG 57.413 39.130 9.72 4.30 0.00 2.90
2505 2608 3.355378 TCATTTACTTGTGGCCATCTGG 58.645 45.455 9.72 2.25 38.53 3.86
2523 2626 3.513680 TGGCACAGAATTCATGCATTC 57.486 42.857 26.62 9.75 41.27 2.67
2575 2679 1.668628 CCAAACACATTACGGCAAGCC 60.669 52.381 0.00 0.00 0.00 4.35
2653 2760 4.690748 TCTTGACCTTCGAAATGTGTGATC 59.309 41.667 0.00 0.00 0.00 2.92
2677 2784 3.756117 AGTCCTGACCTTCAAAATGTCC 58.244 45.455 0.00 0.00 0.00 4.02
2678 2785 3.138283 AGTCCTGACCTTCAAAATGTCCA 59.862 43.478 0.00 0.00 0.00 4.02
2688 2795 6.666546 ACCTTCAAAATGTCCATCTCATCAAT 59.333 34.615 0.00 0.00 0.00 2.57
2767 2887 6.407202 TCTGGCTCCTGATAAAAGTAAACTC 58.593 40.000 0.00 0.00 0.00 3.01
2874 2994 5.007626 TGTGACTGTCAAACTGTATTCTTGC 59.992 40.000 12.81 0.00 30.17 4.01
3070 3197 4.380945 TTGGGCTGGGGTGATGGC 62.381 66.667 0.00 0.00 0.00 4.40
3103 3230 5.471116 TGAGTTCTTCACCATTGATGACTTG 59.529 40.000 0.00 0.00 36.04 3.16
3120 3247 5.258051 TGACTTGGGTTAGTTTGTCAACTT 58.742 37.500 0.00 0.00 40.66 2.66
3126 3253 8.804912 TTGGGTTAGTTTGTCAACTTTTACTA 57.195 30.769 0.00 0.00 40.66 1.82
3136 3263 3.135994 CAACTTTTACTACACTGGGCGT 58.864 45.455 0.00 0.00 0.00 5.68
3151 3278 5.465056 CACTGGGCGTTTTTGAAAAACATAT 59.535 36.000 26.99 8.49 0.00 1.78
3308 3435 3.889815 TCATATTGCCAGGACCTTTCTG 58.110 45.455 0.00 0.00 0.00 3.02
3340 3467 4.811969 ACATGGGAAGTTGTATACGTGA 57.188 40.909 0.00 0.00 0.00 4.35
3423 3550 3.403038 ACGGTCACTTCCTTCTGATTTG 58.597 45.455 0.00 0.00 0.00 2.32
3501 3628 6.801575 TGAAAGTGGTTTTGCTAAAGTAAGG 58.198 36.000 0.00 0.00 0.00 2.69
3507 3634 4.082733 GGTTTTGCTAAAGTAAGGCTGGAG 60.083 45.833 0.00 0.00 0.00 3.86
3530 3665 6.119536 AGTTCAATTTTCTGTACACACCAGA 58.880 36.000 0.00 0.00 37.18 3.86
3567 3705 5.427157 TGGAACTACATGCTAAAGGGATACA 59.573 40.000 0.00 0.00 39.74 2.29
3568 3706 5.758784 GGAACTACATGCTAAAGGGATACAC 59.241 44.000 0.00 0.00 39.74 2.90
3569 3707 5.950544 ACTACATGCTAAAGGGATACACA 57.049 39.130 0.00 0.00 39.74 3.72
3595 3733 9.131791 AGACTTATTTGACACAGTATTTGGTTT 57.868 29.630 0.00 0.00 0.00 3.27
3642 3780 2.693074 ACCACCAAAAGAAAGCGATGTT 59.307 40.909 0.00 0.00 0.00 2.71
3643 3781 3.052036 CCACCAAAAGAAAGCGATGTTG 58.948 45.455 0.00 0.00 0.00 3.33
3644 3782 2.472488 CACCAAAAGAAAGCGATGTTGC 59.528 45.455 0.00 0.00 0.00 4.17
3645 3783 1.715519 CCAAAAGAAAGCGATGTTGCG 59.284 47.619 0.00 0.00 40.67 4.85
3646 3784 1.715519 CAAAAGAAAGCGATGTTGCGG 59.284 47.619 0.00 0.00 40.67 5.69
3647 3785 0.387239 AAAGAAAGCGATGTTGCGGC 60.387 50.000 0.00 0.00 40.67 6.53
3648 3786 1.514678 AAGAAAGCGATGTTGCGGCA 61.515 50.000 0.00 0.00 40.67 5.69
3649 3787 1.081509 GAAAGCGATGTTGCGGCAA 60.082 52.632 12.11 12.11 40.67 4.52
3650 3788 0.662970 GAAAGCGATGTTGCGGCAAA 60.663 50.000 18.23 8.41 40.67 3.68
3651 3789 0.664166 AAAGCGATGTTGCGGCAAAG 60.664 50.000 18.23 10.26 40.67 2.77
3652 3790 1.514678 AAGCGATGTTGCGGCAAAGA 61.515 50.000 18.23 7.58 40.67 2.52
3658 3796 3.608241 CGATGTTGCGGCAAAGACTTAAA 60.608 43.478 18.23 0.00 0.00 1.52
3659 3797 3.784701 TGTTGCGGCAAAGACTTAAAA 57.215 38.095 18.23 0.00 0.00 1.52
3660 3798 3.440228 TGTTGCGGCAAAGACTTAAAAC 58.560 40.909 18.23 1.91 0.00 2.43
3661 3799 2.785713 TGCGGCAAAGACTTAAAACC 57.214 45.000 0.00 0.00 0.00 3.27
3662 3800 2.025155 TGCGGCAAAGACTTAAAACCA 58.975 42.857 0.00 0.00 0.00 3.67
3663 3801 2.427453 TGCGGCAAAGACTTAAAACCAA 59.573 40.909 0.00 0.00 0.00 3.67
3664 3802 3.119101 TGCGGCAAAGACTTAAAACCAAA 60.119 39.130 0.00 0.00 0.00 3.28
3665 3803 4.055360 GCGGCAAAGACTTAAAACCAAAT 58.945 39.130 0.00 0.00 0.00 2.32
3666 3804 5.221263 TGCGGCAAAGACTTAAAACCAAATA 60.221 36.000 0.00 0.00 0.00 1.40
3667 3805 5.118050 GCGGCAAAGACTTAAAACCAAATAC 59.882 40.000 0.00 0.00 0.00 1.89
3668 3806 6.443792 CGGCAAAGACTTAAAACCAAATACT 58.556 36.000 0.00 0.00 0.00 2.12
3669 3807 6.921307 CGGCAAAGACTTAAAACCAAATACTT 59.079 34.615 0.00 0.00 0.00 2.24
3670 3808 7.096230 CGGCAAAGACTTAAAACCAAATACTTG 60.096 37.037 0.00 0.00 0.00 3.16
3734 3872 5.363005 GGTTTAGGACTAGTTGCTATCCTGA 59.637 44.000 8.46 0.00 41.76 3.86
3745 3883 5.877564 AGTTGCTATCCTGAGAAGCTTTAAC 59.122 40.000 0.00 0.00 37.16 2.01
3762 3903 9.927668 AAGCTTTAACAATATGCACTATTTTGT 57.072 25.926 0.00 0.00 40.98 2.83
3799 3940 2.353109 GCTTTTGAAGGAGGGCATTGAC 60.353 50.000 0.00 0.00 0.00 3.18
3927 4068 5.494390 TTACCCTTTTCCTGAACTACCTC 57.506 43.478 0.00 0.00 0.00 3.85
3929 4070 2.913617 CCCTTTTCCTGAACTACCTCCT 59.086 50.000 0.00 0.00 0.00 3.69
4003 4144 6.313519 AGGCTTGTTCCTATCAATAACTGA 57.686 37.500 0.00 0.00 38.81 3.41
4335 5377 7.089538 TGCCACAACACATACAAGATTTATTG 58.910 34.615 0.00 0.00 36.22 1.90
4444 5486 8.764287 GTTGAAAGCACAGCTAACAAATAATTT 58.236 29.630 10.58 0.00 38.25 1.82
4478 5520 3.209410 CCTTGACAATCCTGGCTGATAC 58.791 50.000 3.03 0.00 0.00 2.24
4666 5708 2.424956 GGACAGTACCGTAATCCTCGTT 59.575 50.000 0.00 0.00 0.00 3.85
4718 5760 3.917329 CTCACTCTGGTTTCGTGAGTA 57.083 47.619 9.76 0.00 45.83 2.59
4722 5764 2.186076 CTCTGGTTTCGTGAGTATCGC 58.814 52.381 0.00 0.00 43.58 4.58
4723 5765 1.816835 TCTGGTTTCGTGAGTATCGCT 59.183 47.619 0.00 0.00 45.19 4.93
5082 6133 8.613060 ACTGCCAATATTTGATGATGTACTAG 57.387 34.615 0.00 0.00 0.00 2.57
5111 6162 2.987413 TTCTACGCCATGTGCTTTTG 57.013 45.000 4.92 0.00 38.05 2.44
5123 6174 5.453198 CCATGTGCTTTTGTTCCTAAAACCT 60.453 40.000 0.00 0.00 0.00 3.50
5125 6176 6.139048 TGTGCTTTTGTTCCTAAAACCTAC 57.861 37.500 0.00 0.00 0.00 3.18
5126 6177 5.652891 TGTGCTTTTGTTCCTAAAACCTACA 59.347 36.000 0.00 0.00 0.00 2.74
5245 6711 3.263425 TGTGAACTGAAATACTCCCTCCC 59.737 47.826 0.00 0.00 0.00 4.30
5250 6716 3.705072 ACTGAAATACTCCCTCCCTTACG 59.295 47.826 0.00 0.00 0.00 3.18
5285 6754 6.913873 TTTGAACTAAGACCACACACTTAC 57.086 37.500 0.00 0.00 0.00 2.34
5448 6921 1.812571 ACTACTTTCGCTTGGCCAATG 59.187 47.619 20.85 15.01 0.00 2.82
5460 6933 4.261909 GCTTGGCCAATGAAGATCCTATTG 60.262 45.833 20.85 2.71 0.00 1.90
5462 6935 5.645056 TGGCCAATGAAGATCCTATTGTA 57.355 39.130 0.61 0.00 31.55 2.41
5463 6936 6.012337 TGGCCAATGAAGATCCTATTGTAA 57.988 37.500 0.61 0.00 31.55 2.41
5464 6937 6.430864 TGGCCAATGAAGATCCTATTGTAAA 58.569 36.000 0.61 0.00 31.55 2.01
5465 6938 7.068702 TGGCCAATGAAGATCCTATTGTAAAT 58.931 34.615 0.61 0.00 31.55 1.40
5466 6939 7.231317 TGGCCAATGAAGATCCTATTGTAAATC 59.769 37.037 0.61 0.00 31.55 2.17
5501 7362 3.118223 AGGGGCAGTTAGATTCTACAAGC 60.118 47.826 0.00 0.00 0.00 4.01
5524 7385 3.290710 ACAAGATTCCGGGAATTCATGG 58.709 45.455 22.53 12.20 31.89 3.66
5533 7394 3.397482 CGGGAATTCATGGTTTTTGCAA 58.603 40.909 7.93 0.00 0.00 4.08
5534 7395 3.812053 CGGGAATTCATGGTTTTTGCAAA 59.188 39.130 8.05 8.05 0.00 3.68
5535 7396 4.274459 CGGGAATTCATGGTTTTTGCAAAA 59.726 37.500 20.46 20.46 0.00 2.44
5616 7538 9.777575 TTTTAAGCACACACTTTTAGTTCTTAC 57.222 29.630 0.00 0.00 0.00 2.34
5619 7541 8.904099 AAGCACACACTTTTAGTTCTTACTAT 57.096 30.769 0.00 0.00 36.76 2.12
5620 7542 8.904099 AGCACACACTTTTAGTTCTTACTATT 57.096 30.769 0.00 0.00 36.76 1.73
5681 7621 5.979993 TCCTACAAGTAATTACCATTCGCA 58.020 37.500 12.05 0.00 0.00 5.10
5682 7622 6.408035 TCCTACAAGTAATTACCATTCGCAA 58.592 36.000 12.05 0.00 0.00 4.85
5685 7625 7.696453 CCTACAAGTAATTACCATTCGCAAAAG 59.304 37.037 12.05 0.00 0.00 2.27
5720 7660 9.727859 ACATTTAATTACCCCAAAAATGTTACC 57.272 29.630 7.20 0.00 44.25 2.85
5724 7664 6.614694 ATTACCCCAAAAATGTTACCCTTC 57.385 37.500 0.00 0.00 0.00 3.46
5725 7665 4.207698 ACCCCAAAAATGTTACCCTTCT 57.792 40.909 0.00 0.00 0.00 2.85
5729 7669 6.042322 ACCCCAAAAATGTTACCCTTCTAAAC 59.958 38.462 0.00 0.00 0.00 2.01
5731 7671 6.269077 CCCAAAAATGTTACCCTTCTAAACCT 59.731 38.462 0.00 0.00 0.00 3.50
5732 7672 7.151976 CCAAAAATGTTACCCTTCTAAACCTG 58.848 38.462 0.00 0.00 0.00 4.00
5735 7675 2.040679 TGTTACCCTTCTAAACCTGGGC 59.959 50.000 0.00 0.00 43.25 5.36
5736 7676 2.040679 GTTACCCTTCTAAACCTGGGCA 59.959 50.000 0.00 0.00 43.25 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.591703 GGCACCACACGAGATGAGA 59.408 57.895 0.00 0.00 0.00 3.27
21 22 0.958822 CTTCCCCCAAACAAAGACGG 59.041 55.000 0.00 0.00 0.00 4.79
33 34 0.999712 TTGGACCTTCATCTTCCCCC 59.000 55.000 0.00 0.00 0.00 5.40
34 35 1.916181 TCTTGGACCTTCATCTTCCCC 59.084 52.381 0.00 0.00 0.00 4.81
35 36 3.244911 TGTTCTTGGACCTTCATCTTCCC 60.245 47.826 0.00 0.00 0.00 3.97
36 37 4.021102 TGTTCTTGGACCTTCATCTTCC 57.979 45.455 0.00 0.00 0.00 3.46
37 38 4.457257 CCTTGTTCTTGGACCTTCATCTTC 59.543 45.833 0.00 0.00 0.00 2.87
38 39 4.141158 ACCTTGTTCTTGGACCTTCATCTT 60.141 41.667 0.00 0.00 0.00 2.40
39 40 3.395941 ACCTTGTTCTTGGACCTTCATCT 59.604 43.478 0.00 0.00 0.00 2.90
41 42 3.884037 ACCTTGTTCTTGGACCTTCAT 57.116 42.857 0.00 0.00 0.00 2.57
42 43 3.287222 CAACCTTGTTCTTGGACCTTCA 58.713 45.455 0.00 0.00 0.00 3.02
56 64 1.181098 CCCACAAGCCTCCAACCTTG 61.181 60.000 0.00 0.00 43.05 3.61
86 94 1.745232 TGTCGTTGAGGCAAAACACT 58.255 45.000 3.67 0.00 0.00 3.55
99 107 0.177836 TCCATGCCATCGATGTCGTT 59.822 50.000 23.27 0.17 40.80 3.85
125 133 2.037136 CGTGCTCCTCAAAGCCCAG 61.037 63.158 0.00 0.00 41.77 4.45
130 138 0.745845 CATCCCCGTGCTCCTCAAAG 60.746 60.000 0.00 0.00 0.00 2.77
160 168 0.794229 CATTGTCGTTGTGGCGCATC 60.794 55.000 10.83 0.00 0.00 3.91
173 181 2.877691 GCCGGCAAGGTCATTGTC 59.122 61.111 24.80 0.00 43.70 3.18
191 199 0.897401 AGCTGAAGAAAAGGCCTGCC 60.897 55.000 5.69 0.00 0.00 4.85
220 228 3.426615 AGAAACACCATCGCCCATAAAA 58.573 40.909 0.00 0.00 0.00 1.52
245 253 0.169672 CCGCTTAACGTCTTCGGAGA 59.830 55.000 11.45 0.00 42.43 3.71
250 258 0.863144 TGTTGCCGCTTAACGTCTTC 59.137 50.000 0.00 0.00 41.42 2.87
257 265 0.243365 CAGCCATTGTTGCCGCTTAA 59.757 50.000 0.00 0.00 0.00 1.85
258 266 0.893270 ACAGCCATTGTTGCCGCTTA 60.893 50.000 0.00 0.00 36.31 3.09
268 276 3.250744 CAGATTTCTGCAACAGCCATTG 58.749 45.455 0.00 0.00 37.15 2.82
269 277 3.587797 CAGATTTCTGCAACAGCCATT 57.412 42.857 0.00 0.00 37.15 3.16
294 302 7.049754 AGAAACATTTGCAAGAAAACTCCATT 58.950 30.769 0.00 0.00 0.00 3.16
340 348 7.094975 ACGAAATCACGAAAACCATGATAGAAA 60.095 33.333 0.00 0.00 32.74 2.52
341 349 6.370442 ACGAAATCACGAAAACCATGATAGAA 59.630 34.615 0.00 0.00 32.74 2.10
342 350 5.872617 ACGAAATCACGAAAACCATGATAGA 59.127 36.000 0.00 0.00 32.74 1.98
394 402 1.019278 CGCACGGGCATTGTTCTAGT 61.019 55.000 11.77 0.00 41.24 2.57
395 403 1.019278 ACGCACGGGCATTGTTCTAG 61.019 55.000 11.77 0.00 41.24 2.43
396 404 0.604243 AACGCACGGGCATTGTTCTA 60.604 50.000 11.77 0.00 41.24 2.10
397 405 1.896660 AACGCACGGGCATTGTTCT 60.897 52.632 11.77 0.00 41.24 3.01
398 406 1.729131 CAACGCACGGGCATTGTTC 60.729 57.895 10.90 0.00 38.34 3.18
399 407 2.334653 CAACGCACGGGCATTGTT 59.665 55.556 10.90 2.50 38.34 2.83
400 408 4.341502 GCAACGCACGGGCATTGT 62.342 61.111 20.63 0.74 44.58 2.71
401 409 3.837908 TTGCAACGCACGGGCATTG 62.838 57.895 15.24 15.24 45.48 2.82
402 410 3.600694 TTGCAACGCACGGGCATT 61.601 55.556 11.77 0.00 38.71 3.56
403 411 4.341502 GTTGCAACGCACGGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
413 421 9.216117 ACTAGAATATTTATATCCCGTTGCAAC 57.784 33.333 19.89 19.89 0.00 4.17
432 440 9.379791 GTAAACCACAAGCTAACATACTAGAAT 57.620 33.333 0.00 0.00 0.00 2.40
433 441 7.820872 GGTAAACCACAAGCTAACATACTAGAA 59.179 37.037 0.00 0.00 35.64 2.10
434 442 7.179694 AGGTAAACCACAAGCTAACATACTAGA 59.820 37.037 0.00 0.00 38.89 2.43
435 443 7.328737 AGGTAAACCACAAGCTAACATACTAG 58.671 38.462 1.26 0.00 38.89 2.57
436 444 7.248743 AGGTAAACCACAAGCTAACATACTA 57.751 36.000 1.26 0.00 38.89 1.82
437 445 6.123045 AGGTAAACCACAAGCTAACATACT 57.877 37.500 1.26 0.00 38.89 2.12
438 446 7.767198 TGATAGGTAAACCACAAGCTAACATAC 59.233 37.037 1.26 0.00 38.89 2.39
439 447 7.853299 TGATAGGTAAACCACAAGCTAACATA 58.147 34.615 1.26 0.00 38.89 2.29
440 448 6.717289 TGATAGGTAAACCACAAGCTAACAT 58.283 36.000 1.26 0.00 38.89 2.71
441 449 6.116711 TGATAGGTAAACCACAAGCTAACA 57.883 37.500 1.26 0.00 38.89 2.41
442 450 7.625828 ATTGATAGGTAAACCACAAGCTAAC 57.374 36.000 1.26 0.00 38.89 2.34
443 451 9.914834 ATTATTGATAGGTAAACCACAAGCTAA 57.085 29.630 1.26 3.23 38.89 3.09
445 453 9.914834 TTATTATTGATAGGTAAACCACAAGCT 57.085 29.630 1.26 0.00 38.89 3.74
449 457 8.779303 CGCATTATTATTGATAGGTAAACCACA 58.221 33.333 1.26 0.00 38.89 4.17
450 458 8.995220 TCGCATTATTATTGATAGGTAAACCAC 58.005 33.333 1.26 0.00 38.89 4.16
451 459 9.733556 ATCGCATTATTATTGATAGGTAAACCA 57.266 29.630 1.26 0.00 38.89 3.67
472 480 9.631452 TGATGAACATTTATTTACAAAATCGCA 57.369 25.926 0.00 0.00 0.00 5.10
483 491 9.357652 CGGTCAGAATTTGATGAACATTTATTT 57.642 29.630 5.49 0.00 38.29 1.40
484 492 8.522830 ACGGTCAGAATTTGATGAACATTTATT 58.477 29.630 5.49 0.00 38.29 1.40
485 493 7.970061 CACGGTCAGAATTTGATGAACATTTAT 59.030 33.333 5.49 0.00 38.29 1.40
486 494 7.174080 TCACGGTCAGAATTTGATGAACATTTA 59.826 33.333 5.49 0.00 38.29 1.40
487 495 6.016360 TCACGGTCAGAATTTGATGAACATTT 60.016 34.615 5.49 0.00 38.29 2.32
488 496 5.473162 TCACGGTCAGAATTTGATGAACATT 59.527 36.000 5.49 0.00 38.29 2.71
489 497 5.003160 TCACGGTCAGAATTTGATGAACAT 58.997 37.500 5.49 0.00 38.29 2.71
490 498 4.384940 TCACGGTCAGAATTTGATGAACA 58.615 39.130 5.49 0.00 38.29 3.18
491 499 5.356882 TTCACGGTCAGAATTTGATGAAC 57.643 39.130 0.00 0.00 38.29 3.18
492 500 6.573664 AATTCACGGTCAGAATTTGATGAA 57.426 33.333 1.75 0.00 41.54 2.57
493 501 6.093495 GGTAATTCACGGTCAGAATTTGATGA 59.907 38.462 10.52 0.00 41.54 2.92
494 502 6.094048 AGGTAATTCACGGTCAGAATTTGATG 59.906 38.462 10.52 0.00 41.54 3.07
495 503 6.180472 AGGTAATTCACGGTCAGAATTTGAT 58.820 36.000 10.52 0.00 41.54 2.57
496 504 5.556915 AGGTAATTCACGGTCAGAATTTGA 58.443 37.500 10.52 0.00 41.54 2.69
497 505 5.880054 AGGTAATTCACGGTCAGAATTTG 57.120 39.130 10.52 0.00 41.54 2.32
498 506 9.847224 ATATAAGGTAATTCACGGTCAGAATTT 57.153 29.630 10.52 0.00 41.54 1.82
499 507 9.847224 AATATAAGGTAATTCACGGTCAGAATT 57.153 29.630 10.22 10.22 45.05 2.17
500 508 9.847224 AAATATAAGGTAATTCACGGTCAGAAT 57.153 29.630 0.00 0.00 37.30 2.40
501 509 9.675464 AAAATATAAGGTAATTCACGGTCAGAA 57.325 29.630 0.00 0.00 0.00 3.02
502 510 9.104965 CAAAATATAAGGTAATTCACGGTCAGA 57.895 33.333 0.00 0.00 0.00 3.27
503 511 9.104965 TCAAAATATAAGGTAATTCACGGTCAG 57.895 33.333 0.00 0.00 0.00 3.51
504 512 9.621629 ATCAAAATATAAGGTAATTCACGGTCA 57.378 29.630 0.00 0.00 0.00 4.02
547 555 9.546428 CCTTCTGAACCAATTTCACTTTATTTT 57.454 29.630 0.00 0.00 39.45 1.82
548 556 8.704668 ACCTTCTGAACCAATTTCACTTTATTT 58.295 29.630 0.00 0.00 39.45 1.40
549 557 8.250143 ACCTTCTGAACCAATTTCACTTTATT 57.750 30.769 0.00 0.00 39.45 1.40
550 558 7.839680 ACCTTCTGAACCAATTTCACTTTAT 57.160 32.000 0.00 0.00 39.45 1.40
551 559 8.754991 TTACCTTCTGAACCAATTTCACTTTA 57.245 30.769 0.00 0.00 39.45 1.85
552 560 7.342026 ACTTACCTTCTGAACCAATTTCACTTT 59.658 33.333 0.00 0.00 39.45 2.66
553 561 6.833933 ACTTACCTTCTGAACCAATTTCACTT 59.166 34.615 0.00 0.00 39.45 3.16
554 562 6.365520 ACTTACCTTCTGAACCAATTTCACT 58.634 36.000 0.00 0.00 39.45 3.41
555 563 6.635030 ACTTACCTTCTGAACCAATTTCAC 57.365 37.500 0.00 0.00 39.45 3.18
556 564 8.934023 ATTACTTACCTTCTGAACCAATTTCA 57.066 30.769 0.00 0.00 42.26 2.69
603 611 9.047947 AGACTTATATTTAGAAACACAGGGAGT 57.952 33.333 0.00 0.00 0.00 3.85
604 612 9.892130 AAGACTTATATTTAGAAACACAGGGAG 57.108 33.333 0.00 0.00 0.00 4.30
623 631 8.696374 CCATAGTGGAATCTCTACAAAGACTTA 58.304 37.037 0.00 0.00 40.96 2.24
624 632 7.400339 TCCATAGTGGAATCTCTACAAAGACTT 59.600 37.037 0.00 0.00 45.00 3.01
625 633 6.897966 TCCATAGTGGAATCTCTACAAAGACT 59.102 38.462 0.00 0.00 45.00 3.24
626 634 7.113658 TCCATAGTGGAATCTCTACAAAGAC 57.886 40.000 0.00 0.00 45.00 3.01
640 648 7.066781 TGTAGATTCATGTAGTCCATAGTGGA 58.933 38.462 0.00 0.00 45.98 4.02
641 649 7.290110 TGTAGATTCATGTAGTCCATAGTGG 57.710 40.000 0.00 0.00 39.43 4.00
642 650 9.416794 GAATGTAGATTCATGTAGTCCATAGTG 57.583 37.037 7.69 0.00 38.33 2.74
643 651 9.373450 AGAATGTAGATTCATGTAGTCCATAGT 57.627 33.333 14.46 0.00 40.59 2.12
665 673 8.939929 CGGATGTATGTAGATGCATTTTAGAAT 58.060 33.333 0.00 0.00 35.26 2.40
666 674 7.931407 ACGGATGTATGTAGATGCATTTTAGAA 59.069 33.333 0.00 0.00 35.26 2.10
667 675 7.441836 ACGGATGTATGTAGATGCATTTTAGA 58.558 34.615 0.00 0.00 35.26 2.10
668 676 7.658179 ACGGATGTATGTAGATGCATTTTAG 57.342 36.000 0.00 1.10 35.26 1.85
683 691 6.620877 ATTATGGACCACATACGGATGTAT 57.379 37.500 14.23 4.48 44.82 2.29
684 692 7.541916 TTATTATGGACCACATACGGATGTA 57.458 36.000 14.23 0.00 44.82 2.29
686 694 7.737972 TTTTATTATGGACCACATACGGATG 57.262 36.000 5.94 5.94 41.61 3.51
687 695 8.383175 AGATTTTATTATGGACCACATACGGAT 58.617 33.333 0.00 0.00 41.61 4.18
688 696 7.741785 AGATTTTATTATGGACCACATACGGA 58.258 34.615 0.00 0.00 41.61 4.69
689 697 7.878127 AGAGATTTTATTATGGACCACATACGG 59.122 37.037 0.00 0.00 41.61 4.02
690 698 8.833231 AGAGATTTTATTATGGACCACATACG 57.167 34.615 0.00 0.00 41.61 3.06
718 726 8.720537 TCCCTCCGTTCCTAAATATAAATCTTT 58.279 33.333 0.00 0.00 0.00 2.52
719 727 8.271398 TCCCTCCGTTCCTAAATATAAATCTT 57.729 34.615 0.00 0.00 0.00 2.40
720 728 7.038231 CCTCCCTCCGTTCCTAAATATAAATCT 60.038 40.741 0.00 0.00 0.00 2.40
721 729 7.104290 CCTCCCTCCGTTCCTAAATATAAATC 58.896 42.308 0.00 0.00 0.00 2.17
722 730 6.561454 ACCTCCCTCCGTTCCTAAATATAAAT 59.439 38.462 0.00 0.00 0.00 1.40
723 731 5.907079 ACCTCCCTCCGTTCCTAAATATAAA 59.093 40.000 0.00 0.00 0.00 1.40
724 732 5.470501 ACCTCCCTCCGTTCCTAAATATAA 58.529 41.667 0.00 0.00 0.00 0.98
725 733 5.083953 ACCTCCCTCCGTTCCTAAATATA 57.916 43.478 0.00 0.00 0.00 0.86
726 734 3.937751 ACCTCCCTCCGTTCCTAAATAT 58.062 45.455 0.00 0.00 0.00 1.28
727 735 3.409804 ACCTCCCTCCGTTCCTAAATA 57.590 47.619 0.00 0.00 0.00 1.40
728 736 2.238898 CAACCTCCCTCCGTTCCTAAAT 59.761 50.000 0.00 0.00 0.00 1.40
729 737 1.626825 CAACCTCCCTCCGTTCCTAAA 59.373 52.381 0.00 0.00 0.00 1.85
730 738 1.272807 CAACCTCCCTCCGTTCCTAA 58.727 55.000 0.00 0.00 0.00 2.69
731 739 0.616679 CCAACCTCCCTCCGTTCCTA 60.617 60.000 0.00 0.00 0.00 2.94
732 740 1.918800 CCAACCTCCCTCCGTTCCT 60.919 63.158 0.00 0.00 0.00 3.36
733 741 1.272554 ATCCAACCTCCCTCCGTTCC 61.273 60.000 0.00 0.00 0.00 3.62
734 742 0.107654 CATCCAACCTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
735 743 0.546747 TCATCCAACCTCCCTCCGTT 60.547 55.000 0.00 0.00 0.00 4.44
736 744 0.546747 TTCATCCAACCTCCCTCCGT 60.547 55.000 0.00 0.00 0.00 4.69
737 745 0.179000 CTTCATCCAACCTCCCTCCG 59.821 60.000 0.00 0.00 0.00 4.63
738 746 0.548510 CCTTCATCCAACCTCCCTCC 59.451 60.000 0.00 0.00 0.00 4.30
739 747 0.548510 CCCTTCATCCAACCTCCCTC 59.451 60.000 0.00 0.00 0.00 4.30
740 748 1.575447 GCCCTTCATCCAACCTCCCT 61.575 60.000 0.00 0.00 0.00 4.20
741 749 1.076705 GCCCTTCATCCAACCTCCC 60.077 63.158 0.00 0.00 0.00 4.30
742 750 0.394899 CAGCCCTTCATCCAACCTCC 60.395 60.000 0.00 0.00 0.00 4.30
743 751 0.394899 CCAGCCCTTCATCCAACCTC 60.395 60.000 0.00 0.00 0.00 3.85
744 752 1.142688 ACCAGCCCTTCATCCAACCT 61.143 55.000 0.00 0.00 0.00 3.50
745 753 0.967380 CACCAGCCCTTCATCCAACC 60.967 60.000 0.00 0.00 0.00 3.77
746 754 0.967380 CCACCAGCCCTTCATCCAAC 60.967 60.000 0.00 0.00 0.00 3.77
747 755 1.383799 CCACCAGCCCTTCATCCAA 59.616 57.895 0.00 0.00 0.00 3.53
748 756 2.615465 CCCACCAGCCCTTCATCCA 61.615 63.158 0.00 0.00 0.00 3.41
749 757 1.863155 TTCCCACCAGCCCTTCATCC 61.863 60.000 0.00 0.00 0.00 3.51
750 758 0.394899 CTTCCCACCAGCCCTTCATC 60.395 60.000 0.00 0.00 0.00 2.92
751 759 0.846427 TCTTCCCACCAGCCCTTCAT 60.846 55.000 0.00 0.00 0.00 2.57
752 760 1.065410 TTCTTCCCACCAGCCCTTCA 61.065 55.000 0.00 0.00 0.00 3.02
753 761 0.112412 TTTCTTCCCACCAGCCCTTC 59.888 55.000 0.00 0.00 0.00 3.46
754 762 0.560688 TTTTCTTCCCACCAGCCCTT 59.439 50.000 0.00 0.00 0.00 3.95
755 763 0.113190 CTTTTCTTCCCACCAGCCCT 59.887 55.000 0.00 0.00 0.00 5.19
756 764 0.178961 ACTTTTCTTCCCACCAGCCC 60.179 55.000 0.00 0.00 0.00 5.19
757 765 0.961753 CACTTTTCTTCCCACCAGCC 59.038 55.000 0.00 0.00 0.00 4.85
758 766 1.981256 TCACTTTTCTTCCCACCAGC 58.019 50.000 0.00 0.00 0.00 4.85
759 767 4.584325 TCATTTCACTTTTCTTCCCACCAG 59.416 41.667 0.00 0.00 0.00 4.00
760 768 4.541705 TCATTTCACTTTTCTTCCCACCA 58.458 39.130 0.00 0.00 0.00 4.17
761 769 4.021981 CCTCATTTCACTTTTCTTCCCACC 60.022 45.833 0.00 0.00 0.00 4.61
762 770 4.827284 TCCTCATTTCACTTTTCTTCCCAC 59.173 41.667 0.00 0.00 0.00 4.61
763 771 5.060427 TCCTCATTTCACTTTTCTTCCCA 57.940 39.130 0.00 0.00 0.00 4.37
764 772 5.316987 TCTCCTCATTTCACTTTTCTTCCC 58.683 41.667 0.00 0.00 0.00 3.97
765 773 6.234177 TCTCTCCTCATTTCACTTTTCTTCC 58.766 40.000 0.00 0.00 0.00 3.46
766 774 7.920160 ATCTCTCCTCATTTCACTTTTCTTC 57.080 36.000 0.00 0.00 0.00 2.87
767 775 7.547370 CGTATCTCTCCTCATTTCACTTTTCTT 59.453 37.037 0.00 0.00 0.00 2.52
768 776 7.038659 CGTATCTCTCCTCATTTCACTTTTCT 58.961 38.462 0.00 0.00 0.00 2.52
769 777 7.036220 TCGTATCTCTCCTCATTTCACTTTTC 58.964 38.462 0.00 0.00 0.00 2.29
770 778 6.936279 TCGTATCTCTCCTCATTTCACTTTT 58.064 36.000 0.00 0.00 0.00 2.27
771 779 6.531503 TCGTATCTCTCCTCATTTCACTTT 57.468 37.500 0.00 0.00 0.00 2.66
772 780 6.531503 TTCGTATCTCTCCTCATTTCACTT 57.468 37.500 0.00 0.00 0.00 3.16
773 781 6.531503 TTTCGTATCTCTCCTCATTTCACT 57.468 37.500 0.00 0.00 0.00 3.41
774 782 7.778470 AATTTCGTATCTCTCCTCATTTCAC 57.222 36.000 0.00 0.00 0.00 3.18
775 783 8.260818 AGAAATTTCGTATCTCTCCTCATTTCA 58.739 33.333 12.42 0.00 32.77 2.69
776 784 8.655651 AGAAATTTCGTATCTCTCCTCATTTC 57.344 34.615 12.42 0.00 0.00 2.17
780 788 9.938280 TTTTTAGAAATTTCGTATCTCTCCTCA 57.062 29.630 12.42 0.00 0.00 3.86
810 818 5.538813 TGTGGGACCTACTATACTTAGCATG 59.461 44.000 9.65 0.00 0.00 4.06
811 819 5.539193 GTGTGGGACCTACTATACTTAGCAT 59.461 44.000 9.65 0.00 0.00 3.79
814 822 5.128919 ACGTGTGGGACCTACTATACTTAG 58.871 45.833 9.65 0.00 0.00 2.18
815 823 5.116084 ACGTGTGGGACCTACTATACTTA 57.884 43.478 9.65 0.00 0.00 2.24
816 824 3.950395 GACGTGTGGGACCTACTATACTT 59.050 47.826 9.65 0.00 0.00 2.24
818 826 3.282021 TGACGTGTGGGACCTACTATAC 58.718 50.000 9.65 0.00 0.00 1.47
819 827 3.548770 CTGACGTGTGGGACCTACTATA 58.451 50.000 9.65 0.00 0.00 1.31
820 828 2.376109 CTGACGTGTGGGACCTACTAT 58.624 52.381 9.65 0.00 0.00 2.12
842 850 1.302832 GAGGCCTGGTTGGTGTCTG 60.303 63.158 12.00 0.00 38.35 3.51
1013 1022 1.810030 GACGACGACCCCATGAAGC 60.810 63.158 0.00 0.00 0.00 3.86
1047 1056 3.450115 GTCACGGACGGGAGGAGG 61.450 72.222 0.00 0.00 0.00 4.30
1333 1345 0.108329 TCATCGAAAAGCCCTCGGTC 60.108 55.000 0.00 0.00 36.93 4.79
1334 1346 0.391263 GTCATCGAAAAGCCCTCGGT 60.391 55.000 0.00 0.00 36.93 4.69
1335 1347 0.108138 AGTCATCGAAAAGCCCTCGG 60.108 55.000 0.00 0.00 36.93 4.63
1336 1348 2.099263 TCTAGTCATCGAAAAGCCCTCG 59.901 50.000 0.00 0.00 37.66 4.63
1338 1350 3.100671 ACTCTAGTCATCGAAAAGCCCT 58.899 45.455 0.00 0.00 0.00 5.19
1339 1351 3.528597 ACTCTAGTCATCGAAAAGCCC 57.471 47.619 0.00 0.00 0.00 5.19
1341 1353 7.813852 TCTTAAACTCTAGTCATCGAAAAGC 57.186 36.000 0.00 0.00 0.00 3.51
1343 1355 8.077991 TCGTTCTTAAACTCTAGTCATCGAAAA 58.922 33.333 0.00 0.00 32.95 2.29
1344 1356 7.587629 TCGTTCTTAAACTCTAGTCATCGAAA 58.412 34.615 0.00 0.00 32.95 3.46
1345 1357 7.137490 TCGTTCTTAAACTCTAGTCATCGAA 57.863 36.000 0.00 0.00 32.95 3.71
1347 1359 7.972623 ATTCGTTCTTAAACTCTAGTCATCG 57.027 36.000 0.00 0.00 32.95 3.84
1361 1418 5.950549 ACTCCAGAGTAGGAATTCGTTCTTA 59.049 40.000 5.89 0.00 40.43 2.10
1384 1441 4.142381 GGGATAAGCAAACACAATCCAGAC 60.142 45.833 0.00 0.00 38.28 3.51
1386 1443 3.181497 CGGGATAAGCAAACACAATCCAG 60.181 47.826 0.00 0.00 38.28 3.86
1389 1446 2.423538 AGCGGGATAAGCAAACACAATC 59.576 45.455 0.00 0.00 37.01 2.67
1390 1447 2.164219 CAGCGGGATAAGCAAACACAAT 59.836 45.455 0.00 0.00 37.01 2.71
1395 1487 3.438360 CAATTCAGCGGGATAAGCAAAC 58.562 45.455 0.00 0.00 37.01 2.93
1396 1488 2.426738 CCAATTCAGCGGGATAAGCAAA 59.573 45.455 0.00 0.00 37.01 3.68
1405 1497 2.403252 AACTACTCCAATTCAGCGGG 57.597 50.000 0.00 0.00 0.00 6.13
1406 1498 5.006746 GTGATTAACTACTCCAATTCAGCGG 59.993 44.000 0.00 0.00 0.00 5.52
1407 1499 5.812642 AGTGATTAACTACTCCAATTCAGCG 59.187 40.000 0.00 0.00 37.36 5.18
1430 1522 7.468084 GCAGGTAACAGATTCTACTCACTCTAG 60.468 44.444 0.00 0.00 41.41 2.43
1431 1523 6.319152 GCAGGTAACAGATTCTACTCACTCTA 59.681 42.308 0.00 0.00 41.41 2.43
1432 1524 5.126384 GCAGGTAACAGATTCTACTCACTCT 59.874 44.000 0.00 0.00 41.41 3.24
1433 1525 5.105716 TGCAGGTAACAGATTCTACTCACTC 60.106 44.000 0.00 0.00 41.41 3.51
1434 1526 4.772624 TGCAGGTAACAGATTCTACTCACT 59.227 41.667 0.00 0.00 41.41 3.41
1435 1527 5.073311 TGCAGGTAACAGATTCTACTCAC 57.927 43.478 0.00 0.00 41.41 3.51
1436 1528 5.738619 TTGCAGGTAACAGATTCTACTCA 57.261 39.130 0.00 0.00 41.41 3.41
1463 1555 2.297880 ACAGGTACACGTATGAGCACAA 59.702 45.455 0.00 0.00 0.00 3.33
1474 1566 0.738412 CGGGCCTAAACAGGTACACG 60.738 60.000 0.84 0.00 0.00 4.49
1606 1698 3.523972 AGAGGGGGAAAAAGATACCTCAC 59.476 47.826 10.73 0.00 45.29 3.51
1619 1711 1.081092 CAGGTCAGGAGAGGGGGAA 59.919 63.158 0.00 0.00 0.00 3.97
1641 1733 5.252547 TCATGTATCACTAAGCAGGCAAAA 58.747 37.500 0.00 0.00 0.00 2.44
1658 1750 4.104102 ACTTGGAACCAGGAAACTCATGTA 59.896 41.667 9.85 0.00 40.21 2.29
1772 1864 5.665916 ATCCCAAGCATTTTACTCAAAGG 57.334 39.130 0.00 0.00 0.00 3.11
1893 1986 1.839424 GCCAGGCCATGAGTTTACTT 58.161 50.000 5.01 0.00 0.00 2.24
1927 2022 8.557864 GTTAGACGAGCTACTATTTGATCAGTA 58.442 37.037 0.00 0.00 0.00 2.74
1931 2026 7.916450 ACTTGTTAGACGAGCTACTATTTGATC 59.084 37.037 0.00 0.00 32.76 2.92
1967 2062 7.780271 ACCTTCATTTTCTCAAGTTCCTAAAGT 59.220 33.333 0.00 0.00 0.00 2.66
1971 2066 8.437575 AGTTACCTTCATTTTCTCAAGTTCCTA 58.562 33.333 0.00 0.00 0.00 2.94
1979 2074 4.637276 TCGCAGTTACCTTCATTTTCTCA 58.363 39.130 0.00 0.00 0.00 3.27
1993 2088 5.755375 GGAATCTTCATCTGATTCGCAGTTA 59.245 40.000 9.43 0.00 46.29 2.24
2000 2095 5.927819 ACAGGAGGAATCTTCATCTGATTC 58.072 41.667 5.84 7.66 45.26 2.52
2005 2100 7.038445 CCATGTATACAGGAGGAATCTTCATCT 60.038 40.741 18.73 0.00 38.04 2.90
2180 2275 9.183368 TGAATGTATGGTAATGTGAAAGCATAA 57.817 29.630 0.00 0.00 37.70 1.90
2185 2280 7.094420 TGGTGTGAATGTATGGTAATGTGAAAG 60.094 37.037 0.00 0.00 0.00 2.62
2197 2298 7.044181 AGAGTAGTTGATGGTGTGAATGTATG 58.956 38.462 0.00 0.00 0.00 2.39
2198 2299 7.187824 AGAGTAGTTGATGGTGTGAATGTAT 57.812 36.000 0.00 0.00 0.00 2.29
2201 2302 7.466455 GCATAAGAGTAGTTGATGGTGTGAATG 60.466 40.741 0.00 0.00 0.00 2.67
2202 2303 6.540189 GCATAAGAGTAGTTGATGGTGTGAAT 59.460 38.462 0.00 0.00 0.00 2.57
2204 2305 5.187772 AGCATAAGAGTAGTTGATGGTGTGA 59.812 40.000 0.00 0.00 0.00 3.58
2211 2312 8.223177 ACGTAGTAAGCATAAGAGTAGTTGAT 57.777 34.615 0.00 0.00 41.94 2.57
2213 2314 9.435802 CTAACGTAGTAAGCATAAGAGTAGTTG 57.564 37.037 0.00 0.00 45.00 3.16
2218 2319 6.446781 TGCTAACGTAGTAAGCATAAGAGT 57.553 37.500 9.84 0.00 45.00 3.24
2230 2331 8.941977 TCACAATATTTGAATTGCTAACGTAGT 58.058 29.630 0.00 0.00 41.00 2.73
2244 2345 5.855925 GCGACACACAATTCACAATATTTGA 59.144 36.000 0.00 0.00 0.00 2.69
2263 2364 6.420604 CAGTGTATGTATATCATTGTGCGACA 59.579 38.462 0.00 0.00 37.91 4.35
2266 2369 6.128822 GGTCAGTGTATGTATATCATTGTGCG 60.129 42.308 0.00 0.00 37.91 5.34
2272 2375 6.663523 TCCGATGGTCAGTGTATGTATATCAT 59.336 38.462 0.00 0.00 40.25 2.45
2284 2387 8.657074 TTTATAAAACTATCCGATGGTCAGTG 57.343 34.615 0.00 0.00 0.00 3.66
2382 2485 3.002791 AGCATCATCAACCGTAACACAG 58.997 45.455 0.00 0.00 0.00 3.66
2388 2491 3.727726 CATGGTAGCATCATCAACCGTA 58.272 45.455 3.96 0.00 34.60 4.02
2391 2494 1.265095 CGCATGGTAGCATCATCAACC 59.735 52.381 3.96 0.00 0.00 3.77
2434 2537 8.934023 AAGGACCAAGATGTAATAACTTTTCA 57.066 30.769 0.00 0.00 0.00 2.69
2448 2551 7.555554 CAGATGATCAAAAGTAAGGACCAAGAT 59.444 37.037 0.00 0.00 0.00 2.40
2464 2567 4.591929 TGAATTCAGTGCCAGATGATCAA 58.408 39.130 3.38 0.00 0.00 2.57
2477 2580 4.832266 TGGCCACAAGTAAATGAATTCAGT 59.168 37.500 14.54 8.63 0.00 3.41
2479 2582 5.716228 AGATGGCCACAAGTAAATGAATTCA 59.284 36.000 8.16 11.26 0.00 2.57
2498 2601 2.223735 GCATGAATTCTGTGCCAGATGG 60.224 50.000 19.37 0.00 40.39 3.51
2499 2602 2.425668 TGCATGAATTCTGTGCCAGATG 59.574 45.455 24.04 11.84 40.39 2.90
2500 2603 2.730382 TGCATGAATTCTGTGCCAGAT 58.270 42.857 24.04 0.57 40.39 2.90
2501 2604 2.203470 TGCATGAATTCTGTGCCAGA 57.797 45.000 24.04 10.54 38.87 3.86
2502 2605 3.130516 AGAATGCATGAATTCTGTGCCAG 59.869 43.478 25.53 0.00 43.65 4.85
2503 2606 3.093814 AGAATGCATGAATTCTGTGCCA 58.906 40.909 25.53 16.31 43.65 4.92
2504 2607 3.380637 AGAGAATGCATGAATTCTGTGCC 59.619 43.478 30.11 16.95 44.96 5.01
2505 2608 4.634184 AGAGAATGCATGAATTCTGTGC 57.366 40.909 30.11 17.27 44.96 4.57
2506 2609 5.950883 ACAAGAGAATGCATGAATTCTGTG 58.049 37.500 30.11 26.32 44.96 3.66
2507 2610 6.585695 AACAAGAGAATGCATGAATTCTGT 57.414 33.333 30.11 24.20 44.96 3.41
2508 2611 7.884816 AAAACAAGAGAATGCATGAATTCTG 57.115 32.000 30.11 19.78 44.96 3.02
2575 2679 9.736023 GTGCAGGAAATTACTTTATAAATGAGG 57.264 33.333 0.00 0.00 0.00 3.86
2653 2760 5.355350 GGACATTTTGAAGGTCAGGACTATG 59.645 44.000 7.62 0.00 43.56 2.23
2677 2784 3.815962 CCTGCAGAGGAATTGATGAGATG 59.184 47.826 17.39 0.00 42.93 2.90
2678 2785 3.748027 GCCTGCAGAGGAATTGATGAGAT 60.748 47.826 17.39 0.00 42.93 2.75
2688 2795 0.837691 TCCAAGAGCCTGCAGAGGAA 60.838 55.000 17.39 0.00 42.93 3.36
2767 2887 2.431057 AGTAGCCCCATGACGTTTAGAG 59.569 50.000 0.00 0.00 0.00 2.43
2937 3060 9.658475 CACGTCTTTCAAAAGTAAAATATGTCA 57.342 29.630 2.63 0.00 37.31 3.58
2959 3086 5.106317 ACAAATGAGTGTTTCACTTTCACGT 60.106 36.000 3.91 0.00 45.44 4.49
3070 3197 5.756195 TGGTGAAGAACTCATTTTCAGTG 57.244 39.130 0.00 0.00 36.14 3.66
3103 3230 8.124823 GTGTAGTAAAAGTTGACAAACTAACCC 58.875 37.037 0.00 0.00 46.15 4.11
3120 3247 4.197750 TCAAAAACGCCCAGTGTAGTAAA 58.802 39.130 0.00 0.00 0.00 2.01
3126 3253 2.997303 GTTTTTCAAAAACGCCCAGTGT 59.003 40.909 9.95 0.00 0.00 3.55
3136 3263 9.454859 ACAAAAGGTCCATATGTTTTTCAAAAA 57.545 25.926 1.24 0.00 0.00 1.94
3151 3278 6.323482 TGAGAATTGATGAAACAAAAGGTCCA 59.677 34.615 0.00 0.00 33.44 4.02
3308 3435 3.744660 ACTTCCCATGTTCAAGTGAGTC 58.255 45.455 0.00 0.00 0.00 3.36
3423 3550 3.238108 TCTTCGAAGTCCTTGATGAGC 57.762 47.619 23.85 0.00 0.00 4.26
3501 3628 5.008613 TGTGTACAGAAAATTGAACTCCAGC 59.991 40.000 0.00 0.00 0.00 4.85
3507 3634 6.371809 TCTGGTGTGTACAGAAAATTGAAC 57.628 37.500 0.00 0.00 41.66 3.18
3541 3676 4.843728 TCCCTTTAGCATGTAGTTCCAAG 58.156 43.478 0.00 0.00 0.00 3.61
3567 3705 7.719633 ACCAAATACTGTGTCAAATAAGTCTGT 59.280 33.333 0.00 0.00 0.00 3.41
3568 3706 8.099364 ACCAAATACTGTGTCAAATAAGTCTG 57.901 34.615 0.00 0.00 0.00 3.51
3569 3707 8.691661 AACCAAATACTGTGTCAAATAAGTCT 57.308 30.769 0.00 0.00 0.00 3.24
3595 3733 8.786826 TGTGAGAAAGAAACAGAAACTCTTAA 57.213 30.769 0.00 0.00 0.00 1.85
3642 3780 2.025155 TGGTTTTAAGTCTTTGCCGCA 58.975 42.857 0.00 0.00 0.00 5.69
3643 3781 2.785713 TGGTTTTAAGTCTTTGCCGC 57.214 45.000 0.00 0.00 0.00 6.53
3644 3782 6.443792 AGTATTTGGTTTTAAGTCTTTGCCG 58.556 36.000 0.00 0.00 0.00 5.69
3645 3783 8.072238 CAAGTATTTGGTTTTAAGTCTTTGCC 57.928 34.615 0.00 0.00 0.00 4.52
3664 3802 9.710900 GAAGGAAAAATGATTTGTTCCAAGTAT 57.289 29.630 22.14 10.78 30.78 2.12
3665 3803 8.700051 TGAAGGAAAAATGATTTGTTCCAAGTA 58.300 29.630 22.14 10.84 30.78 2.24
3666 3804 7.563906 TGAAGGAAAAATGATTTGTTCCAAGT 58.436 30.769 22.14 13.25 30.78 3.16
3667 3805 8.436046 TTGAAGGAAAAATGATTTGTTCCAAG 57.564 30.769 22.14 0.00 30.78 3.61
3668 3806 8.798859 TTTGAAGGAAAAATGATTTGTTCCAA 57.201 26.923 22.14 12.36 30.78 3.53
3669 3807 8.838365 CATTTGAAGGAAAAATGATTTGTTCCA 58.162 29.630 22.14 10.32 44.30 3.53
3670 3808 8.839343 ACATTTGAAGGAAAAATGATTTGTTCC 58.161 29.630 16.91 16.91 44.30 3.62
3799 3940 3.059120 CAGCATCCGCATCTGTTATCAAG 60.059 47.826 0.00 0.00 42.27 3.02
4013 4154 2.482721 ACTGGAGATTAAAAACACGCGG 59.517 45.455 12.47 1.27 0.00 6.46
4014 4155 3.185594 TCACTGGAGATTAAAAACACGCG 59.814 43.478 3.53 3.53 0.00 6.01
4314 5352 7.225784 TGGCAATAAATCTTGTATGTGTTGT 57.774 32.000 0.00 0.00 0.00 3.32
4335 5377 4.158394 TCAGTTCAGGCTGAAAAATATGGC 59.842 41.667 30.06 15.54 41.93 4.40
4444 5486 6.549364 AGGATTGTCAAGGTTTGTATTGAACA 59.451 34.615 0.00 0.00 37.19 3.18
4478 5520 2.363683 GGAGCTGAATGAGGAACTTGG 58.636 52.381 0.00 0.00 41.55 3.61
4666 5708 0.535780 CAGAGGTGCCTGCTTTGTGA 60.536 55.000 0.00 0.00 0.00 3.58
4702 5744 2.159366 AGCGATACTCACGAAACCAGAG 60.159 50.000 0.00 0.00 35.56 3.35
4718 5760 3.054802 AGGATCTTGAACCTTTCAGCGAT 60.055 43.478 0.00 3.73 41.38 4.58
4722 5764 6.000219 TCTTTCAGGATCTTGAACCTTTCAG 59.000 40.000 18.93 12.72 41.38 3.02
4723 5765 5.940617 TCTTTCAGGATCTTGAACCTTTCA 58.059 37.500 18.93 3.79 36.84 2.69
4890 5932 4.335082 TCCTCAAAATTCATTACACGCG 57.665 40.909 3.53 3.53 0.00 6.01
5025 6076 6.199376 TCAACTTGTACTATGATACAGGGGA 58.801 40.000 0.00 1.45 36.67 4.81
5026 6077 6.479972 TCAACTTGTACTATGATACAGGGG 57.520 41.667 0.00 0.00 36.67 4.79
5082 6133 4.033358 CACATGGCGTAGAAAACATCTCTC 59.967 45.833 0.00 0.00 39.71 3.20
5179 6644 2.378445 GAGAGCTCGAGAGGCTTTTT 57.622 50.000 18.75 0.00 37.67 1.94
5224 6690 3.519913 AGGGAGGGAGTATTTCAGTTCAC 59.480 47.826 0.00 0.00 0.00 3.18
5225 6691 3.803340 AGGGAGGGAGTATTTCAGTTCA 58.197 45.455 0.00 0.00 0.00 3.18
5320 6791 8.969260 AGTTGCATCTTGAAGATTACATCATA 57.031 30.769 4.67 0.00 31.32 2.15
5448 6921 8.841300 GGTTCCTTGATTTACAATAGGATCTTC 58.159 37.037 0.00 0.00 37.88 2.87
5483 7343 5.862924 TGTTGCTTGTAGAATCTAACTGC 57.137 39.130 0.00 0.00 0.00 4.40
5486 7346 8.178313 GGAATCTTGTTGCTTGTAGAATCTAAC 58.822 37.037 0.00 0.00 0.00 2.34
5501 7362 4.440525 CCATGAATTCCCGGAATCTTGTTG 60.441 45.833 13.24 7.18 30.29 3.33
5524 7385 5.526846 TGGACTGATGGAATTTTGCAAAAAC 59.473 36.000 27.10 21.82 30.51 2.43
5533 7394 8.750515 AAACAAAATTTGGACTGATGGAATTT 57.249 26.923 10.71 0.00 32.89 1.82
5534 7395 7.992033 TGAAACAAAATTTGGACTGATGGAATT 59.008 29.630 10.71 0.00 34.12 2.17
5535 7396 7.507829 TGAAACAAAATTTGGACTGATGGAAT 58.492 30.769 10.71 0.00 34.12 3.01
5653 7593 9.193133 CGAATGGTAATTACTTGTAGGAGTATG 57.807 37.037 15.05 0.00 32.51 2.39
5654 7594 7.871463 GCGAATGGTAATTACTTGTAGGAGTAT 59.129 37.037 15.05 0.00 32.51 2.12
5655 7595 7.147863 TGCGAATGGTAATTACTTGTAGGAGTA 60.148 37.037 15.05 0.00 0.00 2.59
5656 7596 6.047231 GCGAATGGTAATTACTTGTAGGAGT 58.953 40.000 15.05 0.00 0.00 3.85
5657 7597 6.046593 TGCGAATGGTAATTACTTGTAGGAG 58.953 40.000 15.05 2.11 0.00 3.69
5720 7660 2.876581 ACTTTGCCCAGGTTTAGAAGG 58.123 47.619 0.00 0.00 0.00 3.46
5724 7664 1.618343 CCCAACTTTGCCCAGGTTTAG 59.382 52.381 0.00 0.00 0.00 1.85
5725 7665 1.710816 CCCAACTTTGCCCAGGTTTA 58.289 50.000 0.00 0.00 0.00 2.01
5729 7669 1.053835 AAACCCCAACTTTGCCCAGG 61.054 55.000 0.00 0.00 0.00 4.45
5731 7671 1.710816 CTAAACCCCAACTTTGCCCA 58.289 50.000 0.00 0.00 0.00 5.36
5732 7672 0.973632 CCTAAACCCCAACTTTGCCC 59.026 55.000 0.00 0.00 0.00 5.36
5735 7675 1.268625 GCGACCTAAACCCCAACTTTG 59.731 52.381 0.00 0.00 0.00 2.77
5736 7676 1.144298 AGCGACCTAAACCCCAACTTT 59.856 47.619 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.