Multiple sequence alignment - TraesCS6D01G067500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G067500 | chr6D | 100.000 | 2768 | 0 | 0 | 1 | 2768 | 33141286 | 33144053 | 0.000000e+00 | 5112 |
1 | TraesCS6D01G067500 | chr6A | 93.767 | 1123 | 38 | 16 | 427 | 1530 | 37700015 | 37701124 | 0.000000e+00 | 1657 |
2 | TraesCS6D01G067500 | chr6A | 91.700 | 988 | 43 | 23 | 1619 | 2586 | 37701460 | 37702428 | 0.000000e+00 | 1334 |
3 | TraesCS6D01G067500 | chr6A | 86.500 | 200 | 19 | 5 | 2573 | 2766 | 37703477 | 37703674 | 2.160000e-51 | 213 |
4 | TraesCS6D01G067500 | chr6B | 92.344 | 1071 | 47 | 13 | 1503 | 2555 | 69708672 | 69709725 | 0.000000e+00 | 1491 |
5 | TraesCS6D01G067500 | chr6B | 91.705 | 1073 | 57 | 15 | 417 | 1467 | 69707188 | 69708250 | 0.000000e+00 | 1459 |
6 | TraesCS6D01G067500 | chr5B | 83.117 | 231 | 31 | 4 | 54 | 278 | 642143338 | 642143566 | 1.300000e-48 | 204 |
7 | TraesCS6D01G067500 | chr4D | 80.498 | 241 | 37 | 7 | 54 | 287 | 69656664 | 69656427 | 2.830000e-40 | 176 |
8 | TraesCS6D01G067500 | chr4D | 79.235 | 183 | 31 | 4 | 55 | 231 | 337999948 | 337999767 | 1.350000e-23 | 121 |
9 | TraesCS6D01G067500 | chr2D | 83.246 | 191 | 22 | 8 | 55 | 237 | 209113408 | 209113220 | 1.710000e-37 | 167 |
10 | TraesCS6D01G067500 | chr1D | 82.796 | 186 | 23 | 7 | 57 | 235 | 10419525 | 10419708 | 1.030000e-34 | 158 |
11 | TraesCS6D01G067500 | chr1D | 81.098 | 164 | 24 | 5 | 75 | 233 | 16288783 | 16288944 | 1.040000e-24 | 124 |
12 | TraesCS6D01G067500 | chr3D | 80.791 | 177 | 28 | 3 | 49 | 220 | 597753550 | 597753725 | 1.730000e-27 | 134 |
13 | TraesCS6D01G067500 | chr3D | 79.167 | 192 | 32 | 6 | 48 | 233 | 299627112 | 299627301 | 2.890000e-25 | 126 |
14 | TraesCS6D01G067500 | chr5D | 80.337 | 178 | 26 | 6 | 54 | 224 | 464555287 | 464555112 | 2.890000e-25 | 126 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G067500 | chr6D | 33141286 | 33144053 | 2767 | False | 5112 | 5112 | 100.000000 | 1 | 2768 | 1 | chr6D.!!$F1 | 2767 |
1 | TraesCS6D01G067500 | chr6A | 37700015 | 37703674 | 3659 | False | 1068 | 1657 | 90.655667 | 427 | 2766 | 3 | chr6A.!!$F1 | 2339 |
2 | TraesCS6D01G067500 | chr6B | 69707188 | 69709725 | 2537 | False | 1475 | 1491 | 92.024500 | 417 | 2555 | 2 | chr6B.!!$F1 | 2138 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
46 | 47 | 0.032912 | TGCCCATCAATGATGCCAGT | 60.033 | 50.0 | 17.27 | 0.0 | 38.59 | 4.00 | F |
309 | 310 | 0.041312 | GCTGTGCGTTGTCAATCGTT | 60.041 | 50.0 | 8.60 | 0.0 | 0.00 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1596 | 2019 | 1.447838 | GCCGCAGCTGTAGCAGTTA | 60.448 | 57.895 | 20.84 | 0.0 | 45.16 | 2.24 | R |
2244 | 2943 | 3.764237 | TCGCCTTCCAAACTCTACTTT | 57.236 | 42.857 | 0.00 | 0.0 | 0.00 | 2.66 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 5.559148 | AAGATCCATTGGAGACATACCTC | 57.441 | 43.478 | 11.78 | 1.23 | 42.32 | 3.85 |
30 | 31 | 2.246719 | GAGACATACCTCCACATGCC | 57.753 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
31 | 32 | 0.839946 | AGACATACCTCCACATGCCC | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
32 | 33 | 0.546122 | GACATACCTCCACATGCCCA | 59.454 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
33 | 34 | 1.143684 | GACATACCTCCACATGCCCAT | 59.856 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
34 | 35 | 1.143684 | ACATACCTCCACATGCCCATC | 59.856 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
35 | 36 | 1.143481 | CATACCTCCACATGCCCATCA | 59.857 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
36 | 37 | 1.294041 | TACCTCCACATGCCCATCAA | 58.706 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
37 | 38 | 0.632835 | ACCTCCACATGCCCATCAAT | 59.367 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
38 | 39 | 1.037493 | CCTCCACATGCCCATCAATG | 58.963 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
39 | 40 | 1.410507 | CCTCCACATGCCCATCAATGA | 60.411 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
40 | 41 | 2.594131 | CTCCACATGCCCATCAATGAT | 58.406 | 47.619 | 0.00 | 0.00 | 0.00 | 2.45 |
41 | 42 | 2.296190 | CTCCACATGCCCATCAATGATG | 59.704 | 50.000 | 15.88 | 15.88 | 39.52 | 3.07 |
42 | 43 | 1.270094 | CCACATGCCCATCAATGATGC | 60.270 | 52.381 | 17.27 | 8.06 | 38.59 | 3.91 |
43 | 44 | 1.045407 | ACATGCCCATCAATGATGCC | 58.955 | 50.000 | 17.27 | 10.68 | 38.59 | 4.40 |
44 | 45 | 1.044611 | CATGCCCATCAATGATGCCA | 58.955 | 50.000 | 17.27 | 15.46 | 38.59 | 4.92 |
45 | 46 | 1.000843 | CATGCCCATCAATGATGCCAG | 59.999 | 52.381 | 17.27 | 9.27 | 38.59 | 4.85 |
46 | 47 | 0.032912 | TGCCCATCAATGATGCCAGT | 60.033 | 50.000 | 17.27 | 0.00 | 38.59 | 4.00 |
47 | 48 | 1.214923 | TGCCCATCAATGATGCCAGTA | 59.785 | 47.619 | 17.27 | 5.45 | 38.59 | 2.74 |
48 | 49 | 1.884579 | GCCCATCAATGATGCCAGTAG | 59.115 | 52.381 | 17.27 | 3.14 | 38.59 | 2.57 |
49 | 50 | 2.511659 | CCCATCAATGATGCCAGTAGG | 58.488 | 52.381 | 17.27 | 8.41 | 38.59 | 3.18 |
50 | 51 | 2.107031 | CCCATCAATGATGCCAGTAGGA | 59.893 | 50.000 | 17.27 | 0.00 | 38.59 | 2.94 |
51 | 52 | 3.144506 | CCATCAATGATGCCAGTAGGAC | 58.855 | 50.000 | 17.27 | 0.00 | 38.59 | 3.85 |
52 | 53 | 2.602257 | TCAATGATGCCAGTAGGACG | 57.398 | 50.000 | 0.00 | 0.00 | 36.89 | 4.79 |
53 | 54 | 1.138859 | TCAATGATGCCAGTAGGACGG | 59.861 | 52.381 | 0.00 | 0.00 | 36.89 | 4.79 |
54 | 55 | 0.469917 | AATGATGCCAGTAGGACGGG | 59.530 | 55.000 | 0.00 | 0.00 | 36.48 | 5.28 |
55 | 56 | 1.410850 | ATGATGCCAGTAGGACGGGG | 61.411 | 60.000 | 0.00 | 0.00 | 33.85 | 5.73 |
56 | 57 | 2.768344 | ATGCCAGTAGGACGGGGG | 60.768 | 66.667 | 0.00 | 0.00 | 33.85 | 5.40 |
70 | 71 | 3.661648 | GGGGGCAGGCAGGAAGAA | 61.662 | 66.667 | 0.00 | 0.00 | 0.00 | 2.52 |
71 | 72 | 2.361737 | GGGGCAGGCAGGAAGAAC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
72 | 73 | 2.361737 | GGGCAGGCAGGAAGAACC | 60.362 | 66.667 | 0.00 | 0.00 | 39.35 | 3.62 |
87 | 88 | 6.934048 | GGAAGAACCTTATTCCATCTTCAG | 57.066 | 41.667 | 13.81 | 0.00 | 45.49 | 3.02 |
88 | 89 | 5.825151 | GGAAGAACCTTATTCCATCTTCAGG | 59.175 | 44.000 | 13.81 | 0.00 | 45.49 | 3.86 |
89 | 90 | 5.379706 | AGAACCTTATTCCATCTTCAGGG | 57.620 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
90 | 91 | 5.039645 | AGAACCTTATTCCATCTTCAGGGA | 58.960 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
91 | 92 | 5.492524 | AGAACCTTATTCCATCTTCAGGGAA | 59.507 | 40.000 | 0.00 | 0.00 | 46.48 | 3.97 |
92 | 93 | 5.117406 | ACCTTATTCCATCTTCAGGGAAC | 57.883 | 43.478 | 0.00 | 0.00 | 45.35 | 3.62 |
93 | 94 | 4.790790 | ACCTTATTCCATCTTCAGGGAACT | 59.209 | 41.667 | 0.00 | 0.00 | 45.35 | 3.01 |
106 | 107 | 4.719369 | GAACTGCCGCCGTCTCGT | 62.719 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
107 | 108 | 4.719369 | AACTGCCGCCGTCTCGTC | 62.719 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
109 | 110 | 4.421479 | CTGCCGCCGTCTCGTCTT | 62.421 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
110 | 111 | 3.047718 | CTGCCGCCGTCTCGTCTTA | 62.048 | 63.158 | 0.00 | 0.00 | 0.00 | 2.10 |
111 | 112 | 2.578981 | GCCGCCGTCTCGTCTTAC | 60.579 | 66.667 | 0.00 | 0.00 | 0.00 | 2.34 |
112 | 113 | 2.872557 | CCGCCGTCTCGTCTTACA | 59.127 | 61.111 | 0.00 | 0.00 | 0.00 | 2.41 |
113 | 114 | 1.226323 | CCGCCGTCTCGTCTTACAG | 60.226 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
114 | 115 | 1.226323 | CGCCGTCTCGTCTTACAGG | 60.226 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
115 | 116 | 1.642037 | CGCCGTCTCGTCTTACAGGA | 61.642 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
116 | 117 | 0.179169 | GCCGTCTCGTCTTACAGGAC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
117 | 118 | 1.162698 | CCGTCTCGTCTTACAGGACA | 58.837 | 55.000 | 0.00 | 0.00 | 36.12 | 4.02 |
118 | 119 | 1.135746 | CCGTCTCGTCTTACAGGACAC | 60.136 | 57.143 | 0.00 | 0.00 | 36.12 | 3.67 |
119 | 120 | 1.534163 | CGTCTCGTCTTACAGGACACA | 59.466 | 52.381 | 0.00 | 0.00 | 36.12 | 3.72 |
120 | 121 | 2.031420 | CGTCTCGTCTTACAGGACACAA | 60.031 | 50.000 | 0.00 | 0.00 | 36.12 | 3.33 |
121 | 122 | 3.549423 | CGTCTCGTCTTACAGGACACAAA | 60.549 | 47.826 | 0.00 | 0.00 | 36.12 | 2.83 |
122 | 123 | 3.734735 | GTCTCGTCTTACAGGACACAAAC | 59.265 | 47.826 | 0.00 | 0.00 | 36.12 | 2.93 |
123 | 124 | 3.057734 | CTCGTCTTACAGGACACAAACC | 58.942 | 50.000 | 0.00 | 0.00 | 36.12 | 3.27 |
124 | 125 | 2.140717 | CGTCTTACAGGACACAAACCC | 58.859 | 52.381 | 0.00 | 0.00 | 36.12 | 4.11 |
125 | 126 | 2.224209 | CGTCTTACAGGACACAAACCCT | 60.224 | 50.000 | 0.00 | 0.00 | 36.12 | 4.34 |
126 | 127 | 3.006110 | CGTCTTACAGGACACAAACCCTA | 59.994 | 47.826 | 0.00 | 0.00 | 36.12 | 3.53 |
127 | 128 | 4.501915 | CGTCTTACAGGACACAAACCCTAA | 60.502 | 45.833 | 0.00 | 0.00 | 36.12 | 2.69 |
128 | 129 | 4.753610 | GTCTTACAGGACACAAACCCTAAC | 59.246 | 45.833 | 0.00 | 0.00 | 36.35 | 2.34 |
129 | 130 | 4.409574 | TCTTACAGGACACAAACCCTAACA | 59.590 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
130 | 131 | 3.876309 | ACAGGACACAAACCCTAACAT | 57.124 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
131 | 132 | 4.986054 | ACAGGACACAAACCCTAACATA | 57.014 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
132 | 133 | 5.313280 | ACAGGACACAAACCCTAACATAA | 57.687 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
133 | 134 | 5.067954 | ACAGGACACAAACCCTAACATAAC | 58.932 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
134 | 135 | 5.163131 | ACAGGACACAAACCCTAACATAACT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
135 | 136 | 5.411669 | CAGGACACAAACCCTAACATAACTC | 59.588 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
136 | 137 | 5.309806 | AGGACACAAACCCTAACATAACTCT | 59.690 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
137 | 138 | 5.411669 | GGACACAAACCCTAACATAACTCTG | 59.588 | 44.000 | 0.00 | 0.00 | 0.00 | 3.35 |
138 | 139 | 6.182507 | ACACAAACCCTAACATAACTCTGA | 57.817 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
139 | 140 | 6.597562 | ACACAAACCCTAACATAACTCTGAA | 58.402 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
140 | 141 | 6.710744 | ACACAAACCCTAACATAACTCTGAAG | 59.289 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
141 | 142 | 6.934645 | CACAAACCCTAACATAACTCTGAAGA | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
142 | 143 | 7.444183 | CACAAACCCTAACATAACTCTGAAGAA | 59.556 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
143 | 144 | 7.996644 | ACAAACCCTAACATAACTCTGAAGAAA | 59.003 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
144 | 145 | 7.981102 | AACCCTAACATAACTCTGAAGAAAC | 57.019 | 36.000 | 0.00 | 0.00 | 0.00 | 2.78 |
145 | 146 | 6.473758 | ACCCTAACATAACTCTGAAGAAACC | 58.526 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
146 | 147 | 6.272558 | ACCCTAACATAACTCTGAAGAAACCT | 59.727 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
147 | 148 | 7.456902 | ACCCTAACATAACTCTGAAGAAACCTA | 59.543 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
148 | 149 | 8.487028 | CCCTAACATAACTCTGAAGAAACCTAT | 58.513 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
156 | 157 | 8.494016 | AACTCTGAAGAAACCTATAAAATCGG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
157 | 158 | 7.848128 | ACTCTGAAGAAACCTATAAAATCGGA | 58.152 | 34.615 | 0.00 | 0.00 | 0.00 | 4.55 |
158 | 159 | 7.982354 | ACTCTGAAGAAACCTATAAAATCGGAG | 59.018 | 37.037 | 0.00 | 0.00 | 42.18 | 4.63 |
159 | 160 | 6.761714 | TCTGAAGAAACCTATAAAATCGGAGC | 59.238 | 38.462 | 0.00 | 0.00 | 0.00 | 4.70 |
160 | 161 | 5.820947 | TGAAGAAACCTATAAAATCGGAGCC | 59.179 | 40.000 | 0.00 | 0.00 | 0.00 | 4.70 |
161 | 162 | 5.367945 | AGAAACCTATAAAATCGGAGCCA | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
162 | 163 | 5.941788 | AGAAACCTATAAAATCGGAGCCAT | 58.058 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
163 | 164 | 5.998363 | AGAAACCTATAAAATCGGAGCCATC | 59.002 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
164 | 165 | 4.287766 | ACCTATAAAATCGGAGCCATCC | 57.712 | 45.455 | 0.00 | 0.00 | 42.81 | 3.51 |
165 | 166 | 3.009143 | ACCTATAAAATCGGAGCCATCCC | 59.991 | 47.826 | 0.00 | 0.00 | 43.39 | 3.85 |
167 | 168 | 0.534203 | TAAAATCGGAGCCATCCCGC | 60.534 | 55.000 | 0.00 | 0.00 | 46.10 | 6.13 |
168 | 169 | 3.774599 | AAATCGGAGCCATCCCGCC | 62.775 | 63.158 | 0.00 | 0.00 | 46.10 | 6.13 |
185 | 186 | 3.470888 | CGGCAAGGGTCGGGATCT | 61.471 | 66.667 | 0.00 | 0.00 | 38.79 | 2.75 |
186 | 187 | 2.190578 | GGCAAGGGTCGGGATCTG | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
187 | 188 | 2.670148 | GGCAAGGGTCGGGATCTGT | 61.670 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
188 | 189 | 1.153349 | GCAAGGGTCGGGATCTGTC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
189 | 190 | 1.141881 | CAAGGGTCGGGATCTGTCG | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
190 | 191 | 2.722201 | AAGGGTCGGGATCTGTCGC | 61.722 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
198 | 199 | 4.241555 | GATCTGTCGCGCCCCCAT | 62.242 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
199 | 200 | 4.552365 | ATCTGTCGCGCCCCCATG | 62.552 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
206 | 207 | 3.804329 | GCGCCCCCATGACCCTAA | 61.804 | 66.667 | 0.00 | 0.00 | 0.00 | 2.69 |
207 | 208 | 2.510906 | CGCCCCCATGACCCTAAG | 59.489 | 66.667 | 0.00 | 0.00 | 0.00 | 2.18 |
208 | 209 | 2.927056 | GCCCCCATGACCCTAAGG | 59.073 | 66.667 | 0.00 | 0.00 | 40.04 | 2.69 |
209 | 210 | 2.927056 | CCCCCATGACCCTAAGGC | 59.073 | 66.667 | 0.00 | 0.00 | 36.11 | 4.35 |
210 | 211 | 2.768022 | CCCCCATGACCCTAAGGCC | 61.768 | 68.421 | 0.00 | 0.00 | 36.11 | 5.19 |
211 | 212 | 2.006415 | CCCCATGACCCTAAGGCCA | 61.006 | 63.158 | 5.01 | 0.00 | 36.11 | 5.36 |
212 | 213 | 1.227383 | CCCATGACCCTAAGGCCAC | 59.773 | 63.158 | 5.01 | 0.00 | 36.11 | 5.01 |
213 | 214 | 1.227383 | CCATGACCCTAAGGCCACC | 59.773 | 63.158 | 5.01 | 0.00 | 36.11 | 4.61 |
214 | 215 | 1.153168 | CATGACCCTAAGGCCACCG | 60.153 | 63.158 | 5.01 | 0.00 | 36.11 | 4.94 |
215 | 216 | 2.375345 | ATGACCCTAAGGCCACCGG | 61.375 | 63.158 | 5.01 | 0.00 | 36.11 | 5.28 |
216 | 217 | 2.686106 | GACCCTAAGGCCACCGGA | 60.686 | 66.667 | 9.46 | 0.00 | 36.11 | 5.14 |
217 | 218 | 2.687566 | ACCCTAAGGCCACCGGAG | 60.688 | 66.667 | 9.46 | 0.00 | 36.11 | 4.63 |
218 | 219 | 2.365105 | CCCTAAGGCCACCGGAGA | 60.365 | 66.667 | 9.46 | 0.00 | 0.00 | 3.71 |
219 | 220 | 2.732619 | CCCTAAGGCCACCGGAGAC | 61.733 | 68.421 | 9.46 | 0.00 | 0.00 | 3.36 |
220 | 221 | 1.987855 | CCTAAGGCCACCGGAGACA | 60.988 | 63.158 | 9.46 | 0.00 | 0.00 | 3.41 |
221 | 222 | 1.550130 | CCTAAGGCCACCGGAGACAA | 61.550 | 60.000 | 9.46 | 0.00 | 0.00 | 3.18 |
222 | 223 | 0.108138 | CTAAGGCCACCGGAGACAAG | 60.108 | 60.000 | 9.46 | 0.00 | 0.00 | 3.16 |
223 | 224 | 1.550130 | TAAGGCCACCGGAGACAAGG | 61.550 | 60.000 | 9.46 | 0.54 | 0.00 | 3.61 |
224 | 225 | 3.637273 | GGCCACCGGAGACAAGGT | 61.637 | 66.667 | 9.46 | 0.00 | 42.34 | 3.50 |
228 | 229 | 3.468063 | ACCGGAGACAAGGTGGAC | 58.532 | 61.111 | 9.46 | 0.00 | 39.66 | 4.02 |
229 | 230 | 2.214920 | ACCGGAGACAAGGTGGACC | 61.215 | 63.158 | 9.46 | 0.00 | 39.66 | 4.46 |
230 | 231 | 2.261671 | CGGAGACAAGGTGGACCG | 59.738 | 66.667 | 0.00 | 0.00 | 42.08 | 4.79 |
231 | 232 | 2.663196 | GGAGACAAGGTGGACCGG | 59.337 | 66.667 | 0.00 | 0.00 | 42.08 | 5.28 |
232 | 233 | 2.047179 | GAGACAAGGTGGACCGGC | 60.047 | 66.667 | 0.00 | 0.00 | 42.08 | 6.13 |
233 | 234 | 3.934391 | GAGACAAGGTGGACCGGCG | 62.934 | 68.421 | 0.00 | 0.00 | 42.08 | 6.46 |
253 | 254 | 2.181021 | GGCGTCGGCGGGATATAG | 59.819 | 66.667 | 13.05 | 0.00 | 41.24 | 1.31 |
254 | 255 | 2.338015 | GGCGTCGGCGGGATATAGA | 61.338 | 63.158 | 13.05 | 0.00 | 41.24 | 1.98 |
255 | 256 | 1.136984 | GCGTCGGCGGGATATAGAG | 59.863 | 63.158 | 13.05 | 0.00 | 38.78 | 2.43 |
256 | 257 | 1.801332 | CGTCGGCGGGATATAGAGG | 59.199 | 63.158 | 7.21 | 0.00 | 0.00 | 3.69 |
257 | 258 | 0.675837 | CGTCGGCGGGATATAGAGGA | 60.676 | 60.000 | 7.21 | 0.00 | 0.00 | 3.71 |
258 | 259 | 1.096416 | GTCGGCGGGATATAGAGGAG | 58.904 | 60.000 | 7.21 | 0.00 | 0.00 | 3.69 |
259 | 260 | 0.680280 | TCGGCGGGATATAGAGGAGC | 60.680 | 60.000 | 7.21 | 0.00 | 0.00 | 4.70 |
260 | 261 | 1.668101 | CGGCGGGATATAGAGGAGCC | 61.668 | 65.000 | 0.00 | 0.00 | 39.68 | 4.70 |
261 | 262 | 1.331399 | GGCGGGATATAGAGGAGCCC | 61.331 | 65.000 | 0.00 | 0.00 | 37.32 | 5.19 |
262 | 263 | 0.324830 | GCGGGATATAGAGGAGCCCT | 60.325 | 60.000 | 0.00 | 0.00 | 36.62 | 5.19 |
263 | 264 | 1.063867 | GCGGGATATAGAGGAGCCCTA | 60.064 | 57.143 | 0.00 | 0.00 | 36.62 | 3.53 |
264 | 265 | 2.938838 | CGGGATATAGAGGAGCCCTAG | 58.061 | 57.143 | 0.00 | 0.00 | 36.62 | 3.02 |
265 | 266 | 2.242708 | CGGGATATAGAGGAGCCCTAGT | 59.757 | 54.545 | 0.00 | 0.00 | 36.62 | 2.57 |
266 | 267 | 3.686120 | CGGGATATAGAGGAGCCCTAGTC | 60.686 | 56.522 | 0.00 | 0.00 | 36.62 | 2.59 |
267 | 268 | 3.530149 | GGGATATAGAGGAGCCCTAGTCT | 59.470 | 52.174 | 0.00 | 0.00 | 35.86 | 3.24 |
268 | 269 | 4.385977 | GGGATATAGAGGAGCCCTAGTCTC | 60.386 | 54.167 | 0.00 | 1.71 | 35.86 | 3.36 |
269 | 270 | 4.477213 | GGATATAGAGGAGCCCTAGTCTCT | 59.523 | 50.000 | 8.56 | 0.00 | 39.57 | 3.10 |
270 | 271 | 5.044402 | GGATATAGAGGAGCCCTAGTCTCTT | 60.044 | 48.000 | 8.56 | 2.38 | 37.68 | 2.85 |
271 | 272 | 4.825199 | ATAGAGGAGCCCTAGTCTCTTT | 57.175 | 45.455 | 8.56 | 0.00 | 37.68 | 2.52 |
272 | 273 | 3.483255 | AGAGGAGCCCTAGTCTCTTTT | 57.517 | 47.619 | 8.56 | 0.00 | 33.28 | 2.27 |
273 | 274 | 3.797312 | AGAGGAGCCCTAGTCTCTTTTT | 58.203 | 45.455 | 8.56 | 0.00 | 33.28 | 1.94 |
288 | 289 | 4.519610 | TTTTTGGGAGGAGGCAGC | 57.480 | 55.556 | 0.00 | 0.00 | 0.00 | 5.25 |
289 | 290 | 1.603455 | TTTTTGGGAGGAGGCAGCG | 60.603 | 57.895 | 0.00 | 0.00 | 0.00 | 5.18 |
290 | 291 | 3.567579 | TTTTGGGAGGAGGCAGCGG | 62.568 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
302 | 303 | 4.374702 | CAGCGGCTGTGCGTTGTC | 62.375 | 66.667 | 21.60 | 0.00 | 40.67 | 3.18 |
303 | 304 | 4.908687 | AGCGGCTGTGCGTTGTCA | 62.909 | 61.111 | 0.00 | 0.00 | 40.67 | 3.58 |
304 | 305 | 3.947841 | GCGGCTGTGCGTTGTCAA | 61.948 | 61.111 | 0.00 | 0.00 | 0.00 | 3.18 |
305 | 306 | 2.945984 | CGGCTGTGCGTTGTCAAT | 59.054 | 55.556 | 0.00 | 0.00 | 0.00 | 2.57 |
306 | 307 | 1.154413 | CGGCTGTGCGTTGTCAATC | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 2.67 |
307 | 308 | 1.154413 | GGCTGTGCGTTGTCAATCG | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
308 | 309 | 1.569493 | GCTGTGCGTTGTCAATCGT | 59.431 | 52.632 | 8.60 | 0.00 | 0.00 | 3.73 |
309 | 310 | 0.041312 | GCTGTGCGTTGTCAATCGTT | 60.041 | 50.000 | 8.60 | 0.00 | 0.00 | 3.85 |
310 | 311 | 1.662360 | CTGTGCGTTGTCAATCGTTG | 58.338 | 50.000 | 8.60 | 0.00 | 0.00 | 4.10 |
311 | 312 | 1.003972 | CTGTGCGTTGTCAATCGTTGT | 60.004 | 47.619 | 8.60 | 0.00 | 0.00 | 3.32 |
312 | 313 | 1.398739 | TGTGCGTTGTCAATCGTTGTT | 59.601 | 42.857 | 8.60 | 0.00 | 0.00 | 2.83 |
313 | 314 | 1.772966 | GTGCGTTGTCAATCGTTGTTG | 59.227 | 47.619 | 8.60 | 0.00 | 0.00 | 3.33 |
314 | 315 | 0.770008 | GCGTTGTCAATCGTTGTTGC | 59.230 | 50.000 | 8.60 | 0.00 | 0.00 | 4.17 |
315 | 316 | 1.858000 | GCGTTGTCAATCGTTGTTGCA | 60.858 | 47.619 | 8.60 | 0.00 | 0.00 | 4.08 |
316 | 317 | 2.445316 | CGTTGTCAATCGTTGTTGCAA | 58.555 | 42.857 | 0.00 | 0.00 | 0.00 | 4.08 |
317 | 318 | 2.213131 | CGTTGTCAATCGTTGTTGCAAC | 59.787 | 45.455 | 22.83 | 22.83 | 39.67 | 4.17 |
318 | 319 | 3.434637 | GTTGTCAATCGTTGTTGCAACT | 58.565 | 40.909 | 28.61 | 6.80 | 39.79 | 3.16 |
319 | 320 | 3.773860 | TGTCAATCGTTGTTGCAACTT | 57.226 | 38.095 | 28.61 | 12.68 | 0.00 | 2.66 |
320 | 321 | 3.433709 | TGTCAATCGTTGTTGCAACTTG | 58.566 | 40.909 | 28.61 | 22.60 | 0.00 | 3.16 |
321 | 322 | 3.119673 | TGTCAATCGTTGTTGCAACTTGT | 60.120 | 39.130 | 28.61 | 9.05 | 0.00 | 3.16 |
322 | 323 | 3.240401 | GTCAATCGTTGTTGCAACTTGTG | 59.760 | 43.478 | 28.61 | 17.23 | 0.00 | 3.33 |
323 | 324 | 2.490328 | ATCGTTGTTGCAACTTGTGG | 57.510 | 45.000 | 28.61 | 14.05 | 0.00 | 4.17 |
324 | 325 | 0.453793 | TCGTTGTTGCAACTTGTGGG | 59.546 | 50.000 | 28.61 | 12.78 | 0.00 | 4.61 |
325 | 326 | 0.453793 | CGTTGTTGCAACTTGTGGGA | 59.546 | 50.000 | 28.61 | 5.26 | 0.00 | 4.37 |
326 | 327 | 1.135257 | CGTTGTTGCAACTTGTGGGAA | 60.135 | 47.619 | 28.61 | 11.25 | 0.00 | 3.97 |
327 | 328 | 2.672478 | CGTTGTTGCAACTTGTGGGAAA | 60.672 | 45.455 | 28.61 | 10.53 | 0.00 | 3.13 |
328 | 329 | 2.929398 | GTTGTTGCAACTTGTGGGAAAG | 59.071 | 45.455 | 28.61 | 0.00 | 0.00 | 2.62 |
329 | 330 | 2.175202 | TGTTGCAACTTGTGGGAAAGT | 58.825 | 42.857 | 28.61 | 0.00 | 42.21 | 2.66 |
330 | 331 | 2.094286 | TGTTGCAACTTGTGGGAAAGTG | 60.094 | 45.455 | 28.61 | 0.00 | 40.28 | 3.16 |
331 | 332 | 2.136298 | TGCAACTTGTGGGAAAGTGA | 57.864 | 45.000 | 0.00 | 0.00 | 40.28 | 3.41 |
332 | 333 | 2.023673 | TGCAACTTGTGGGAAAGTGAG | 58.976 | 47.619 | 0.00 | 0.00 | 40.28 | 3.51 |
333 | 334 | 2.297701 | GCAACTTGTGGGAAAGTGAGA | 58.702 | 47.619 | 0.00 | 0.00 | 40.28 | 3.27 |
334 | 335 | 2.687935 | GCAACTTGTGGGAAAGTGAGAA | 59.312 | 45.455 | 0.00 | 0.00 | 40.28 | 2.87 |
335 | 336 | 3.243201 | GCAACTTGTGGGAAAGTGAGAAG | 60.243 | 47.826 | 0.00 | 0.00 | 40.28 | 2.85 |
336 | 337 | 4.199310 | CAACTTGTGGGAAAGTGAGAAGA | 58.801 | 43.478 | 0.00 | 0.00 | 40.28 | 2.87 |
337 | 338 | 4.503714 | ACTTGTGGGAAAGTGAGAAGAA | 57.496 | 40.909 | 0.00 | 0.00 | 38.95 | 2.52 |
338 | 339 | 4.855340 | ACTTGTGGGAAAGTGAGAAGAAA | 58.145 | 39.130 | 0.00 | 0.00 | 38.95 | 2.52 |
339 | 340 | 4.884164 | ACTTGTGGGAAAGTGAGAAGAAAG | 59.116 | 41.667 | 0.00 | 0.00 | 38.95 | 2.62 |
340 | 341 | 4.771114 | TGTGGGAAAGTGAGAAGAAAGA | 57.229 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
341 | 342 | 4.451900 | TGTGGGAAAGTGAGAAGAAAGAC | 58.548 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
342 | 343 | 4.164221 | TGTGGGAAAGTGAGAAGAAAGACT | 59.836 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
343 | 344 | 5.365605 | TGTGGGAAAGTGAGAAGAAAGACTA | 59.634 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
344 | 345 | 6.043243 | TGTGGGAAAGTGAGAAGAAAGACTAT | 59.957 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
345 | 346 | 7.234782 | TGTGGGAAAGTGAGAAGAAAGACTATA | 59.765 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
346 | 347 | 7.546316 | GTGGGAAAGTGAGAAGAAAGACTATAC | 59.454 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
347 | 348 | 6.752815 | GGGAAAGTGAGAAGAAAGACTATACG | 59.247 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
348 | 349 | 7.362747 | GGGAAAGTGAGAAGAAAGACTATACGA | 60.363 | 40.741 | 0.00 | 0.00 | 0.00 | 3.43 |
349 | 350 | 8.192110 | GGAAAGTGAGAAGAAAGACTATACGAT | 58.808 | 37.037 | 0.00 | 0.00 | 0.00 | 3.73 |
350 | 351 | 8.918961 | AAAGTGAGAAGAAAGACTATACGATG | 57.081 | 34.615 | 0.00 | 0.00 | 0.00 | 3.84 |
351 | 352 | 6.500041 | AGTGAGAAGAAAGACTATACGATGC | 58.500 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
352 | 353 | 5.396947 | GTGAGAAGAAAGACTATACGATGCG | 59.603 | 44.000 | 0.00 | 0.00 | 0.00 | 4.73 |
353 | 354 | 4.291783 | AGAAGAAAGACTATACGATGCGC | 58.708 | 43.478 | 0.00 | 0.00 | 0.00 | 6.09 |
354 | 355 | 3.710326 | AGAAAGACTATACGATGCGCA | 57.290 | 42.857 | 14.96 | 14.96 | 0.00 | 6.09 |
355 | 356 | 4.244425 | AGAAAGACTATACGATGCGCAT | 57.756 | 40.909 | 25.66 | 25.66 | 0.00 | 4.73 |
356 | 357 | 4.230657 | AGAAAGACTATACGATGCGCATC | 58.769 | 43.478 | 35.20 | 35.20 | 34.56 | 3.91 |
357 | 358 | 3.643159 | AAGACTATACGATGCGCATCA | 57.357 | 42.857 | 40.42 | 27.55 | 37.69 | 3.07 |
358 | 359 | 3.857549 | AGACTATACGATGCGCATCAT | 57.142 | 42.857 | 40.42 | 32.97 | 37.69 | 2.45 |
359 | 360 | 3.505836 | AGACTATACGATGCGCATCATG | 58.494 | 45.455 | 40.42 | 30.11 | 37.69 | 3.07 |
360 | 361 | 3.191371 | AGACTATACGATGCGCATCATGA | 59.809 | 43.478 | 40.42 | 28.14 | 37.69 | 3.07 |
361 | 362 | 3.913089 | ACTATACGATGCGCATCATGAA | 58.087 | 40.909 | 40.42 | 26.02 | 37.69 | 2.57 |
362 | 363 | 4.498241 | ACTATACGATGCGCATCATGAAT | 58.502 | 39.130 | 40.42 | 29.45 | 37.69 | 2.57 |
363 | 364 | 4.564372 | ACTATACGATGCGCATCATGAATC | 59.436 | 41.667 | 40.42 | 20.82 | 37.69 | 2.52 |
364 | 365 | 1.585297 | ACGATGCGCATCATGAATCA | 58.415 | 45.000 | 40.42 | 5.12 | 37.69 | 2.57 |
365 | 366 | 1.529865 | ACGATGCGCATCATGAATCAG | 59.470 | 47.619 | 40.42 | 26.99 | 37.69 | 2.90 |
366 | 367 | 1.796459 | CGATGCGCATCATGAATCAGA | 59.204 | 47.619 | 40.42 | 4.33 | 37.69 | 3.27 |
367 | 368 | 2.415512 | CGATGCGCATCATGAATCAGAT | 59.584 | 45.455 | 40.42 | 11.12 | 37.69 | 2.90 |
368 | 369 | 3.725010 | CGATGCGCATCATGAATCAGATG | 60.725 | 47.826 | 40.42 | 21.30 | 43.42 | 2.90 |
369 | 370 | 1.877443 | TGCGCATCATGAATCAGATGG | 59.123 | 47.619 | 5.66 | 11.93 | 41.43 | 3.51 |
370 | 371 | 1.401148 | GCGCATCATGAATCAGATGGC | 60.401 | 52.381 | 17.75 | 15.62 | 41.43 | 4.40 |
371 | 372 | 2.152016 | CGCATCATGAATCAGATGGCT | 58.848 | 47.619 | 17.75 | 0.00 | 41.43 | 4.75 |
372 | 373 | 2.159824 | CGCATCATGAATCAGATGGCTC | 59.840 | 50.000 | 17.75 | 6.71 | 41.43 | 4.70 |
373 | 374 | 2.159824 | GCATCATGAATCAGATGGCTCG | 59.840 | 50.000 | 17.75 | 0.00 | 41.43 | 5.03 |
374 | 375 | 3.400255 | CATCATGAATCAGATGGCTCGT | 58.600 | 45.455 | 0.00 | 0.00 | 38.33 | 4.18 |
375 | 376 | 2.830104 | TCATGAATCAGATGGCTCGTG | 58.170 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
376 | 377 | 1.871676 | CATGAATCAGATGGCTCGTGG | 59.128 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
377 | 378 | 0.178767 | TGAATCAGATGGCTCGTGGG | 59.821 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
378 | 379 | 1.153086 | AATCAGATGGCTCGTGGGC | 60.153 | 57.895 | 0.00 | 0.00 | 41.27 | 5.36 |
397 | 398 | 1.821216 | CCGGCTGGCTTTTAGAAAGA | 58.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
398 | 399 | 1.468914 | CCGGCTGGCTTTTAGAAAGAC | 59.531 | 52.381 | 0.00 | 2.06 | 0.00 | 3.01 |
399 | 400 | 1.468914 | CGGCTGGCTTTTAGAAAGACC | 59.531 | 52.381 | 3.97 | 5.65 | 0.00 | 3.85 |
400 | 401 | 2.796557 | GGCTGGCTTTTAGAAAGACCT | 58.203 | 47.619 | 3.97 | 0.00 | 0.00 | 3.85 |
401 | 402 | 3.618997 | CGGCTGGCTTTTAGAAAGACCTA | 60.619 | 47.826 | 3.97 | 0.00 | 0.00 | 3.08 |
402 | 403 | 3.942115 | GGCTGGCTTTTAGAAAGACCTAG | 59.058 | 47.826 | 3.97 | 0.00 | 0.00 | 3.02 |
403 | 404 | 3.375610 | GCTGGCTTTTAGAAAGACCTAGC | 59.624 | 47.826 | 3.97 | 3.83 | 0.00 | 3.42 |
404 | 405 | 4.579869 | CTGGCTTTTAGAAAGACCTAGCA | 58.420 | 43.478 | 3.97 | 0.00 | 0.00 | 3.49 |
405 | 406 | 4.324267 | TGGCTTTTAGAAAGACCTAGCAC | 58.676 | 43.478 | 3.97 | 0.00 | 0.00 | 4.40 |
406 | 407 | 3.371285 | GGCTTTTAGAAAGACCTAGCACG | 59.629 | 47.826 | 4.69 | 0.00 | 0.00 | 5.34 |
407 | 408 | 3.181519 | GCTTTTAGAAAGACCTAGCACGC | 60.182 | 47.826 | 4.69 | 0.00 | 0.00 | 5.34 |
408 | 409 | 2.667473 | TTAGAAAGACCTAGCACGCC | 57.333 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
409 | 410 | 0.822164 | TAGAAAGACCTAGCACGCCC | 59.178 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
410 | 411 | 1.449778 | GAAAGACCTAGCACGCCCC | 60.450 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
411 | 412 | 1.900545 | GAAAGACCTAGCACGCCCCT | 61.901 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
412 | 413 | 1.900545 | AAAGACCTAGCACGCCCCTC | 61.901 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
413 | 414 | 3.851128 | GACCTAGCACGCCCCTCC | 61.851 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
414 | 415 | 4.400251 | ACCTAGCACGCCCCTCCT | 62.400 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
415 | 416 | 3.083997 | CCTAGCACGCCCCTCCTT | 61.084 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
425 | 426 | 2.299013 | ACGCCCCTCCTTTTTGAAAATC | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
438 | 439 | 5.713792 | TTTGAAAATCGCTATGGAACCAA | 57.286 | 34.783 | 0.00 | 0.00 | 0.00 | 3.67 |
441 | 442 | 5.708948 | TGAAAATCGCTATGGAACCAAAAG | 58.291 | 37.500 | 0.00 | 0.30 | 0.00 | 2.27 |
442 | 443 | 3.782889 | AATCGCTATGGAACCAAAAGC | 57.217 | 42.857 | 16.46 | 16.46 | 36.37 | 3.51 |
443 | 444 | 2.192664 | TCGCTATGGAACCAAAAGCA | 57.807 | 45.000 | 22.22 | 12.28 | 38.27 | 3.91 |
444 | 445 | 2.509569 | TCGCTATGGAACCAAAAGCAA | 58.490 | 42.857 | 22.22 | 9.19 | 38.27 | 3.91 |
446 | 447 | 3.509575 | TCGCTATGGAACCAAAAGCAAAT | 59.490 | 39.130 | 22.22 | 0.21 | 38.27 | 2.32 |
447 | 448 | 4.021544 | TCGCTATGGAACCAAAAGCAAATT | 60.022 | 37.500 | 22.22 | 0.00 | 38.27 | 1.82 |
448 | 449 | 4.091800 | CGCTATGGAACCAAAAGCAAATTG | 59.908 | 41.667 | 22.22 | 9.19 | 38.27 | 2.32 |
456 | 457 | 6.367149 | GGAACCAAAAGCAAATTGAGATTCTC | 59.633 | 38.462 | 6.73 | 6.73 | 0.00 | 2.87 |
548 | 551 | 4.853924 | TCTCTTTTTGAAACAGATGCCC | 57.146 | 40.909 | 0.00 | 0.00 | 0.00 | 5.36 |
578 | 581 | 3.002583 | TGCATGGTCCTGGCTCGA | 61.003 | 61.111 | 0.00 | 0.00 | 0.00 | 4.04 |
642 | 647 | 1.333636 | CGGATCCAGCAACCTCCTCT | 61.334 | 60.000 | 13.41 | 0.00 | 0.00 | 3.69 |
762 | 776 | 3.775654 | CACGTCAGCCTCCTCCCC | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
874 | 889 | 1.519751 | CTCCCTCCGCTCCTCGTATG | 61.520 | 65.000 | 0.00 | 0.00 | 36.19 | 2.39 |
1353 | 1390 | 1.456331 | CGGGTACGGAGGTGGGTAT | 60.456 | 63.158 | 0.00 | 0.00 | 36.18 | 2.73 |
1607 | 2030 | 2.165301 | GCGGCGGTAACTGCTACAG | 61.165 | 63.158 | 9.78 | 0.00 | 38.96 | 2.74 |
1735 | 2408 | 4.129737 | GCTACCACTGCGGCGAGA | 62.130 | 66.667 | 12.98 | 0.00 | 39.03 | 4.04 |
1977 | 2666 | 8.947055 | ATGGTTAATTTTGCTATGAATTGGTC | 57.053 | 30.769 | 0.00 | 0.00 | 0.00 | 4.02 |
2012 | 2701 | 2.492484 | ACCCGTACTCTCAGTTGATGTC | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2077 | 2766 | 3.943381 | TGATGATGAGGAGATTGCAACAC | 59.057 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
2142 | 2833 | 6.102663 | GGTCGTTATTATCATCCTCCATGAG | 58.897 | 44.000 | 0.00 | 0.00 | 45.11 | 2.90 |
2193 | 2892 | 4.410555 | TCAGATCTCTGCTCTAGTGGTAGA | 59.589 | 45.833 | 2.21 | 0.00 | 43.46 | 2.59 |
2201 | 2900 | 7.716123 | TCTCTGCTCTAGTGGTAGAACTATTAC | 59.284 | 40.741 | 7.38 | 0.00 | 34.73 | 1.89 |
2211 | 2910 | 6.602406 | GTGGTAGAACTATTACCTCTGTCTGA | 59.398 | 42.308 | 3.40 | 0.00 | 40.97 | 3.27 |
2221 | 2920 | 2.975489 | ACCTCTGTCTGACATCCTGTTT | 59.025 | 45.455 | 11.45 | 0.00 | 0.00 | 2.83 |
2222 | 2921 | 3.244353 | ACCTCTGTCTGACATCCTGTTTG | 60.244 | 47.826 | 11.45 | 0.00 | 0.00 | 2.93 |
2224 | 2923 | 4.384056 | CTCTGTCTGACATCCTGTTTGTT | 58.616 | 43.478 | 11.45 | 0.00 | 0.00 | 2.83 |
2226 | 2925 | 5.924356 | TCTGTCTGACATCCTGTTTGTTAA | 58.076 | 37.500 | 11.45 | 0.00 | 0.00 | 2.01 |
2227 | 2926 | 6.533730 | TCTGTCTGACATCCTGTTTGTTAAT | 58.466 | 36.000 | 11.45 | 0.00 | 0.00 | 1.40 |
2228 | 2927 | 6.998074 | TCTGTCTGACATCCTGTTTGTTAATT | 59.002 | 34.615 | 11.45 | 0.00 | 0.00 | 1.40 |
2229 | 2928 | 6.969366 | TGTCTGACATCCTGTTTGTTAATTG | 58.031 | 36.000 | 6.36 | 0.00 | 0.00 | 2.32 |
2230 | 2929 | 6.770303 | TGTCTGACATCCTGTTTGTTAATTGA | 59.230 | 34.615 | 6.36 | 0.00 | 0.00 | 2.57 |
2231 | 2930 | 7.448161 | TGTCTGACATCCTGTTTGTTAATTGAT | 59.552 | 33.333 | 6.36 | 0.00 | 0.00 | 2.57 |
2232 | 2931 | 8.299570 | GTCTGACATCCTGTTTGTTAATTGATT | 58.700 | 33.333 | 2.24 | 0.00 | 0.00 | 2.57 |
2233 | 2932 | 9.513906 | TCTGACATCCTGTTTGTTAATTGATTA | 57.486 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
2262 | 2961 | 6.819397 | ATGTTAAAGTAGAGTTTGGAAGGC | 57.181 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
2330 | 3032 | 1.692411 | AAGTGAGGTTTTGTCTGGGC | 58.308 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2331 | 3033 | 0.846693 | AGTGAGGTTTTGTCTGGGCT | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2370 | 3073 | 4.969816 | AGTTTTTACTGGATTTGCGATCG | 58.030 | 39.130 | 11.69 | 11.69 | 0.00 | 3.69 |
2388 | 3091 | 0.542805 | CGACCCTTTTAATCCGGGGA | 59.457 | 55.000 | 0.00 | 0.00 | 42.44 | 4.81 |
2461 | 3165 | 1.529244 | GCCCTGTCTGGTGCTGTTT | 60.529 | 57.895 | 0.00 | 0.00 | 0.00 | 2.83 |
2502 | 3206 | 2.363038 | AGTGTCTAGTGGTTGCGTTGTA | 59.637 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
2511 | 3215 | 4.277423 | AGTGGTTGCGTTGTATTTAAGCTT | 59.723 | 37.500 | 3.48 | 3.48 | 0.00 | 3.74 |
2578 | 3283 | 6.591834 | GTCCATATACATCTCCAGCACAATAC | 59.408 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
2587 | 4354 | 4.067896 | CTCCAGCACAATACAGAAGTTGT | 58.932 | 43.478 | 0.00 | 0.00 | 43.96 | 3.32 |
2589 | 4356 | 4.887071 | TCCAGCACAATACAGAAGTTGTTT | 59.113 | 37.500 | 0.00 | 0.00 | 41.29 | 2.83 |
2625 | 4394 | 5.595542 | TCTGGGATTTATTTCTGGATTGCTG | 59.404 | 40.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2629 | 4398 | 6.351286 | GGGATTTATTTCTGGATTGCTGTTGT | 60.351 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
2635 | 4404 | 3.877559 | TCTGGATTGCTGTTGTGATAGG | 58.122 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2642 | 4411 | 4.882842 | TGCTGTTGTGATAGGTCTGTAA | 57.117 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
2643 | 4412 | 4.566004 | TGCTGTTGTGATAGGTCTGTAAC | 58.434 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
2646 | 4415 | 4.890088 | TGTTGTGATAGGTCTGTAACACC | 58.110 | 43.478 | 0.00 | 0.00 | 0.00 | 4.16 |
2647 | 4416 | 3.861276 | TGTGATAGGTCTGTAACACCG | 57.139 | 47.619 | 0.00 | 0.00 | 39.13 | 4.94 |
2659 | 4430 | 2.614983 | TGTAACACCGAGTTTTTCTGCC | 59.385 | 45.455 | 0.00 | 0.00 | 41.64 | 4.85 |
2661 | 4432 | 0.463116 | ACACCGAGTTTTTCTGCCGT | 60.463 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2697 | 4469 | 0.542702 | ATCCCCACCTGTGCCTTTTG | 60.543 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2707 | 4479 | 3.005684 | CCTGTGCCTTTTGTGCTTAATCA | 59.994 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2709 | 4481 | 3.636300 | TGTGCCTTTTGTGCTTAATCACT | 59.364 | 39.130 | 10.55 | 0.00 | 37.81 | 3.41 |
2717 | 4489 | 9.643693 | CCTTTTGTGCTTAATCACTTGAATTAT | 57.356 | 29.630 | 10.55 | 0.00 | 37.81 | 1.28 |
2731 | 4503 | 3.035363 | TGAATTATAGTCTGGGACGGCA | 58.965 | 45.455 | 0.00 | 0.00 | 37.67 | 5.69 |
2733 | 4505 | 4.836175 | TGAATTATAGTCTGGGACGGCATA | 59.164 | 41.667 | 0.00 | 0.00 | 37.67 | 3.14 |
2749 | 4521 | 2.286418 | GGCATAGCATTACTGTTGCGTC | 60.286 | 50.000 | 0.00 | 0.00 | 44.82 | 5.19 |
2759 | 4531 | 3.670377 | GTTGCGTCTTGGTGGGGC | 61.670 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
2763 | 4535 | 4.619227 | CGTCTTGGTGGGGCGTGT | 62.619 | 66.667 | 0.00 | 0.00 | 0.00 | 4.49 |
2764 | 4536 | 2.745037 | GTCTTGGTGGGGCGTGTA | 59.255 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
2765 | 4537 | 1.375523 | GTCTTGGTGGGGCGTGTAG | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
2766 | 4538 | 1.534476 | TCTTGGTGGGGCGTGTAGA | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 2.59 |
2767 | 4539 | 0.907704 | TCTTGGTGGGGCGTGTAGAT | 60.908 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.559148 | GAGGTATGTCTCCAATGGATCTT | 57.441 | 43.478 | 0.87 | 0.74 | 0.00 | 2.40 |
11 | 12 | 1.202698 | GGGCATGTGGAGGTATGTCTC | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
12 | 13 | 0.839946 | GGGCATGTGGAGGTATGTCT | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
13 | 14 | 0.546122 | TGGGCATGTGGAGGTATGTC | 59.454 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
14 | 15 | 1.143684 | GATGGGCATGTGGAGGTATGT | 59.856 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
15 | 16 | 1.143481 | TGATGGGCATGTGGAGGTATG | 59.857 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
16 | 17 | 1.521764 | TGATGGGCATGTGGAGGTAT | 58.478 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
17 | 18 | 1.294041 | TTGATGGGCATGTGGAGGTA | 58.706 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
18 | 19 | 0.632835 | ATTGATGGGCATGTGGAGGT | 59.367 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
19 | 20 | 1.037493 | CATTGATGGGCATGTGGAGG | 58.963 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
20 | 21 | 2.061509 | TCATTGATGGGCATGTGGAG | 57.938 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
21 | 22 | 2.312390 | CATCATTGATGGGCATGTGGA | 58.688 | 47.619 | 17.31 | 0.00 | 36.51 | 4.02 |
22 | 23 | 1.270094 | GCATCATTGATGGGCATGTGG | 60.270 | 52.381 | 24.29 | 0.46 | 40.10 | 4.17 |
23 | 24 | 1.270094 | GGCATCATTGATGGGCATGTG | 60.270 | 52.381 | 24.29 | 2.49 | 40.10 | 3.21 |
24 | 25 | 1.045407 | GGCATCATTGATGGGCATGT | 58.955 | 50.000 | 24.29 | 0.00 | 40.10 | 3.21 |
25 | 26 | 1.000843 | CTGGCATCATTGATGGGCATG | 59.999 | 52.381 | 24.29 | 13.96 | 40.10 | 4.06 |
26 | 27 | 1.338107 | CTGGCATCATTGATGGGCAT | 58.662 | 50.000 | 24.29 | 0.00 | 40.10 | 4.40 |
27 | 28 | 0.032912 | ACTGGCATCATTGATGGGCA | 60.033 | 50.000 | 24.29 | 20.53 | 40.10 | 5.36 |
28 | 29 | 1.884579 | CTACTGGCATCATTGATGGGC | 59.115 | 52.381 | 24.29 | 17.80 | 40.10 | 5.36 |
29 | 30 | 2.107031 | TCCTACTGGCATCATTGATGGG | 59.893 | 50.000 | 24.29 | 16.60 | 40.10 | 4.00 |
30 | 31 | 3.144506 | GTCCTACTGGCATCATTGATGG | 58.855 | 50.000 | 24.29 | 12.70 | 40.10 | 3.51 |
31 | 32 | 2.804527 | CGTCCTACTGGCATCATTGATG | 59.195 | 50.000 | 20.14 | 20.14 | 42.37 | 3.07 |
32 | 33 | 2.224378 | CCGTCCTACTGGCATCATTGAT | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
33 | 34 | 1.138859 | CCGTCCTACTGGCATCATTGA | 59.861 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
34 | 35 | 1.586422 | CCGTCCTACTGGCATCATTG | 58.414 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
35 | 36 | 0.469917 | CCCGTCCTACTGGCATCATT | 59.530 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
36 | 37 | 1.410850 | CCCCGTCCTACTGGCATCAT | 61.411 | 60.000 | 0.00 | 0.00 | 0.00 | 2.45 |
37 | 38 | 2.063979 | CCCCGTCCTACTGGCATCA | 61.064 | 63.158 | 0.00 | 0.00 | 0.00 | 3.07 |
38 | 39 | 2.808206 | CCCCCGTCCTACTGGCATC | 61.808 | 68.421 | 0.00 | 0.00 | 0.00 | 3.91 |
39 | 40 | 2.768344 | CCCCCGTCCTACTGGCAT | 60.768 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
53 | 54 | 3.661648 | TTCTTCCTGCCTGCCCCC | 61.662 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
54 | 55 | 2.361737 | GTTCTTCCTGCCTGCCCC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
55 | 56 | 2.361737 | GGTTCTTCCTGCCTGCCC | 60.362 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
56 | 57 | 2.759795 | AGGTTCTTCCTGCCTGCC | 59.240 | 61.111 | 0.00 | 0.00 | 46.19 | 4.85 |
64 | 65 | 5.825151 | CCTGAAGATGGAATAAGGTTCTTCC | 59.175 | 44.000 | 8.12 | 0.91 | 40.88 | 3.46 |
65 | 66 | 5.825151 | CCCTGAAGATGGAATAAGGTTCTTC | 59.175 | 44.000 | 0.00 | 0.00 | 41.58 | 2.87 |
66 | 67 | 5.492524 | TCCCTGAAGATGGAATAAGGTTCTT | 59.507 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
67 | 68 | 5.039645 | TCCCTGAAGATGGAATAAGGTTCT | 58.960 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
68 | 69 | 5.373812 | TCCCTGAAGATGGAATAAGGTTC | 57.626 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
69 | 70 | 5.254032 | AGTTCCCTGAAGATGGAATAAGGTT | 59.746 | 40.000 | 0.00 | 0.00 | 42.32 | 3.50 |
70 | 71 | 4.790790 | AGTTCCCTGAAGATGGAATAAGGT | 59.209 | 41.667 | 0.00 | 0.00 | 42.32 | 3.50 |
71 | 72 | 5.128919 | CAGTTCCCTGAAGATGGAATAAGG | 58.871 | 45.833 | 0.00 | 0.00 | 42.32 | 2.69 |
72 | 73 | 4.578105 | GCAGTTCCCTGAAGATGGAATAAG | 59.422 | 45.833 | 0.00 | 0.00 | 42.32 | 1.73 |
73 | 74 | 4.526970 | GCAGTTCCCTGAAGATGGAATAA | 58.473 | 43.478 | 0.00 | 0.00 | 42.32 | 1.40 |
74 | 75 | 3.117888 | GGCAGTTCCCTGAAGATGGAATA | 60.118 | 47.826 | 0.00 | 0.00 | 42.32 | 1.75 |
75 | 76 | 2.357569 | GGCAGTTCCCTGAAGATGGAAT | 60.358 | 50.000 | 0.00 | 0.00 | 42.32 | 3.01 |
76 | 77 | 1.004745 | GGCAGTTCCCTGAAGATGGAA | 59.995 | 52.381 | 0.00 | 0.00 | 41.50 | 3.53 |
77 | 78 | 0.620556 | GGCAGTTCCCTGAAGATGGA | 59.379 | 55.000 | 0.00 | 0.00 | 41.50 | 3.41 |
78 | 79 | 0.745845 | CGGCAGTTCCCTGAAGATGG | 60.746 | 60.000 | 0.00 | 0.00 | 41.50 | 3.51 |
79 | 80 | 1.372087 | GCGGCAGTTCCCTGAAGATG | 61.372 | 60.000 | 0.00 | 0.00 | 41.50 | 2.90 |
80 | 81 | 1.078143 | GCGGCAGTTCCCTGAAGAT | 60.078 | 57.895 | 0.00 | 0.00 | 41.50 | 2.40 |
81 | 82 | 2.347490 | GCGGCAGTTCCCTGAAGA | 59.653 | 61.111 | 0.00 | 0.00 | 41.50 | 2.87 |
82 | 83 | 2.747855 | GGCGGCAGTTCCCTGAAG | 60.748 | 66.667 | 3.07 | 0.00 | 41.50 | 3.02 |
83 | 84 | 4.697756 | CGGCGGCAGTTCCCTGAA | 62.698 | 66.667 | 10.53 | 0.00 | 41.50 | 3.02 |
89 | 90 | 4.719369 | ACGAGACGGCGGCAGTTC | 62.719 | 66.667 | 18.30 | 2.12 | 35.12 | 3.01 |
90 | 91 | 4.719369 | GACGAGACGGCGGCAGTT | 62.719 | 66.667 | 18.30 | 0.00 | 39.62 | 3.16 |
92 | 93 | 3.047718 | TAAGACGAGACGGCGGCAG | 62.048 | 63.158 | 18.30 | 11.70 | 43.13 | 4.85 |
93 | 94 | 3.057548 | TAAGACGAGACGGCGGCA | 61.058 | 61.111 | 18.30 | 0.00 | 43.13 | 5.69 |
94 | 95 | 2.578981 | GTAAGACGAGACGGCGGC | 60.579 | 66.667 | 13.24 | 8.92 | 41.28 | 6.53 |
95 | 96 | 1.226323 | CTGTAAGACGAGACGGCGG | 60.226 | 63.158 | 13.24 | 0.00 | 41.28 | 6.13 |
96 | 97 | 1.226323 | CCTGTAAGACGAGACGGCG | 60.226 | 63.158 | 4.80 | 4.80 | 41.28 | 6.46 |
97 | 98 | 0.179169 | GTCCTGTAAGACGAGACGGC | 60.179 | 60.000 | 0.00 | 0.00 | 34.07 | 5.68 |
98 | 99 | 1.135746 | GTGTCCTGTAAGACGAGACGG | 60.136 | 57.143 | 0.00 | 0.00 | 39.77 | 4.79 |
99 | 100 | 1.534163 | TGTGTCCTGTAAGACGAGACG | 59.466 | 52.381 | 0.00 | 0.00 | 39.77 | 4.18 |
100 | 101 | 3.637998 | TTGTGTCCTGTAAGACGAGAC | 57.362 | 47.619 | 0.00 | 0.00 | 39.77 | 3.36 |
101 | 102 | 3.243636 | GGTTTGTGTCCTGTAAGACGAGA | 60.244 | 47.826 | 0.00 | 0.00 | 39.77 | 4.04 |
102 | 103 | 3.057734 | GGTTTGTGTCCTGTAAGACGAG | 58.942 | 50.000 | 0.00 | 0.00 | 39.77 | 4.18 |
103 | 104 | 2.224113 | GGGTTTGTGTCCTGTAAGACGA | 60.224 | 50.000 | 0.00 | 0.00 | 39.77 | 4.20 |
104 | 105 | 2.140717 | GGGTTTGTGTCCTGTAAGACG | 58.859 | 52.381 | 0.00 | 0.00 | 39.77 | 4.18 |
105 | 106 | 3.487120 | AGGGTTTGTGTCCTGTAAGAC | 57.513 | 47.619 | 0.00 | 0.00 | 34.07 | 3.01 |
106 | 107 | 4.409574 | TGTTAGGGTTTGTGTCCTGTAAGA | 59.590 | 41.667 | 0.00 | 0.00 | 34.07 | 2.10 |
107 | 108 | 4.710324 | TGTTAGGGTTTGTGTCCTGTAAG | 58.290 | 43.478 | 0.00 | 0.00 | 34.75 | 2.34 |
108 | 109 | 4.774660 | TGTTAGGGTTTGTGTCCTGTAA | 57.225 | 40.909 | 0.00 | 0.00 | 34.75 | 2.41 |
109 | 110 | 4.986054 | ATGTTAGGGTTTGTGTCCTGTA | 57.014 | 40.909 | 0.00 | 0.00 | 34.75 | 2.74 |
110 | 111 | 3.876309 | ATGTTAGGGTTTGTGTCCTGT | 57.124 | 42.857 | 0.00 | 0.00 | 34.75 | 4.00 |
111 | 112 | 5.313712 | AGTTATGTTAGGGTTTGTGTCCTG | 58.686 | 41.667 | 0.00 | 0.00 | 34.75 | 3.86 |
112 | 113 | 5.309806 | AGAGTTATGTTAGGGTTTGTGTCCT | 59.690 | 40.000 | 0.00 | 0.00 | 37.18 | 3.85 |
113 | 114 | 5.411669 | CAGAGTTATGTTAGGGTTTGTGTCC | 59.588 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
114 | 115 | 6.228258 | TCAGAGTTATGTTAGGGTTTGTGTC | 58.772 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
115 | 116 | 6.182507 | TCAGAGTTATGTTAGGGTTTGTGT | 57.817 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
116 | 117 | 6.934645 | TCTTCAGAGTTATGTTAGGGTTTGTG | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
117 | 118 | 7.074653 | TCTTCAGAGTTATGTTAGGGTTTGT | 57.925 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
118 | 119 | 7.979444 | TTCTTCAGAGTTATGTTAGGGTTTG | 57.021 | 36.000 | 0.00 | 0.00 | 0.00 | 2.93 |
119 | 120 | 7.447545 | GGTTTCTTCAGAGTTATGTTAGGGTTT | 59.552 | 37.037 | 0.00 | 0.00 | 0.00 | 3.27 |
120 | 121 | 6.940867 | GGTTTCTTCAGAGTTATGTTAGGGTT | 59.059 | 38.462 | 0.00 | 0.00 | 0.00 | 4.11 |
121 | 122 | 6.272558 | AGGTTTCTTCAGAGTTATGTTAGGGT | 59.727 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
122 | 123 | 6.712276 | AGGTTTCTTCAGAGTTATGTTAGGG | 58.288 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
130 | 131 | 9.595823 | CCGATTTTATAGGTTTCTTCAGAGTTA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
131 | 132 | 8.319146 | TCCGATTTTATAGGTTTCTTCAGAGTT | 58.681 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
132 | 133 | 7.848128 | TCCGATTTTATAGGTTTCTTCAGAGT | 58.152 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
133 | 134 | 7.042389 | GCTCCGATTTTATAGGTTTCTTCAGAG | 60.042 | 40.741 | 0.00 | 0.00 | 0.00 | 3.35 |
134 | 135 | 6.761714 | GCTCCGATTTTATAGGTTTCTTCAGA | 59.238 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
135 | 136 | 6.017852 | GGCTCCGATTTTATAGGTTTCTTCAG | 60.018 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
136 | 137 | 5.820947 | GGCTCCGATTTTATAGGTTTCTTCA | 59.179 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
137 | 138 | 5.820947 | TGGCTCCGATTTTATAGGTTTCTTC | 59.179 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
138 | 139 | 5.751586 | TGGCTCCGATTTTATAGGTTTCTT | 58.248 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
139 | 140 | 5.367945 | TGGCTCCGATTTTATAGGTTTCT | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
140 | 141 | 5.181433 | GGATGGCTCCGATTTTATAGGTTTC | 59.819 | 44.000 | 0.00 | 0.00 | 0.00 | 2.78 |
141 | 142 | 5.070685 | GGATGGCTCCGATTTTATAGGTTT | 58.929 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
142 | 143 | 4.506802 | GGGATGGCTCCGATTTTATAGGTT | 60.507 | 45.833 | 0.00 | 0.00 | 43.11 | 3.50 |
143 | 144 | 3.009143 | GGGATGGCTCCGATTTTATAGGT | 59.991 | 47.826 | 0.00 | 0.00 | 43.11 | 3.08 |
144 | 145 | 3.610911 | GGGATGGCTCCGATTTTATAGG | 58.389 | 50.000 | 0.00 | 0.00 | 43.11 | 2.57 |
167 | 168 | 4.547367 | GATCCCGACCCTTGCCGG | 62.547 | 72.222 | 0.00 | 0.00 | 44.94 | 6.13 |
168 | 169 | 3.470888 | AGATCCCGACCCTTGCCG | 61.471 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
169 | 170 | 2.190578 | CAGATCCCGACCCTTGCC | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
170 | 171 | 1.153349 | GACAGATCCCGACCCTTGC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
171 | 172 | 1.141881 | CGACAGATCCCGACCCTTG | 59.858 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
172 | 173 | 2.722201 | GCGACAGATCCCGACCCTT | 61.722 | 63.158 | 4.26 | 0.00 | 0.00 | 3.95 |
173 | 174 | 3.148279 | GCGACAGATCCCGACCCT | 61.148 | 66.667 | 4.26 | 0.00 | 0.00 | 4.34 |
174 | 175 | 4.570663 | CGCGACAGATCCCGACCC | 62.571 | 72.222 | 0.00 | 0.00 | 0.00 | 4.46 |
181 | 182 | 4.241555 | ATGGGGGCGCGACAGATC | 62.242 | 66.667 | 17.00 | 0.00 | 0.00 | 2.75 |
182 | 183 | 4.552365 | CATGGGGGCGCGACAGAT | 62.552 | 66.667 | 17.00 | 0.00 | 0.00 | 2.90 |
189 | 190 | 3.774599 | CTTAGGGTCATGGGGGCGC | 62.775 | 68.421 | 0.00 | 0.00 | 0.00 | 6.53 |
190 | 191 | 2.510906 | CTTAGGGTCATGGGGGCG | 59.489 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
191 | 192 | 2.927056 | CCTTAGGGTCATGGGGGC | 59.073 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
192 | 193 | 2.768022 | GGCCTTAGGGTCATGGGGG | 61.768 | 68.421 | 0.00 | 0.00 | 37.14 | 5.40 |
193 | 194 | 2.006415 | TGGCCTTAGGGTCATGGGG | 61.006 | 63.158 | 3.32 | 0.00 | 43.05 | 4.96 |
194 | 195 | 3.754043 | TGGCCTTAGGGTCATGGG | 58.246 | 61.111 | 3.32 | 0.00 | 43.05 | 4.00 |
198 | 199 | 3.006728 | CCGGTGGCCTTAGGGTCA | 61.007 | 66.667 | 3.32 | 0.00 | 46.10 | 4.02 |
199 | 200 | 2.686106 | TCCGGTGGCCTTAGGGTC | 60.686 | 66.667 | 3.32 | 0.00 | 37.81 | 4.46 |
200 | 201 | 2.687566 | CTCCGGTGGCCTTAGGGT | 60.688 | 66.667 | 3.32 | 0.00 | 34.45 | 4.34 |
201 | 202 | 2.365105 | TCTCCGGTGGCCTTAGGG | 60.365 | 66.667 | 3.32 | 0.00 | 0.00 | 3.53 |
202 | 203 | 1.550130 | TTGTCTCCGGTGGCCTTAGG | 61.550 | 60.000 | 3.32 | 4.25 | 0.00 | 2.69 |
203 | 204 | 0.108138 | CTTGTCTCCGGTGGCCTTAG | 60.108 | 60.000 | 3.32 | 0.00 | 0.00 | 2.18 |
204 | 205 | 1.550130 | CCTTGTCTCCGGTGGCCTTA | 61.550 | 60.000 | 3.32 | 0.00 | 0.00 | 2.69 |
205 | 206 | 2.750350 | CTTGTCTCCGGTGGCCTT | 59.250 | 61.111 | 3.32 | 0.00 | 0.00 | 4.35 |
206 | 207 | 3.322466 | CCTTGTCTCCGGTGGCCT | 61.322 | 66.667 | 3.32 | 0.00 | 0.00 | 5.19 |
207 | 208 | 3.637273 | ACCTTGTCTCCGGTGGCC | 61.637 | 66.667 | 5.53 | 0.00 | 30.90 | 5.36 |
208 | 209 | 2.358737 | CACCTTGTCTCCGGTGGC | 60.359 | 66.667 | 0.00 | 0.00 | 45.39 | 5.01 |
211 | 212 | 2.214920 | GGTCCACCTTGTCTCCGGT | 61.215 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
212 | 213 | 2.663196 | GGTCCACCTTGTCTCCGG | 59.337 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
213 | 214 | 2.261671 | CGGTCCACCTTGTCTCCG | 59.738 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
214 | 215 | 2.663196 | CCGGTCCACCTTGTCTCC | 59.337 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
215 | 216 | 2.047179 | GCCGGTCCACCTTGTCTC | 60.047 | 66.667 | 1.90 | 0.00 | 0.00 | 3.36 |
216 | 217 | 4.003788 | CGCCGGTCCACCTTGTCT | 62.004 | 66.667 | 1.90 | 0.00 | 0.00 | 3.41 |
235 | 236 | 3.678717 | CTATATCCCGCCGACGCCG | 62.679 | 68.421 | 0.00 | 0.00 | 38.22 | 6.46 |
236 | 237 | 2.181021 | CTATATCCCGCCGACGCC | 59.819 | 66.667 | 0.00 | 0.00 | 38.22 | 5.68 |
237 | 238 | 1.136984 | CTCTATATCCCGCCGACGC | 59.863 | 63.158 | 0.00 | 0.00 | 38.22 | 5.19 |
238 | 239 | 0.675837 | TCCTCTATATCCCGCCGACG | 60.676 | 60.000 | 0.00 | 0.00 | 39.67 | 5.12 |
239 | 240 | 1.096416 | CTCCTCTATATCCCGCCGAC | 58.904 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
240 | 241 | 0.680280 | GCTCCTCTATATCCCGCCGA | 60.680 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
241 | 242 | 1.668101 | GGCTCCTCTATATCCCGCCG | 61.668 | 65.000 | 0.00 | 0.00 | 0.00 | 6.46 |
242 | 243 | 1.331399 | GGGCTCCTCTATATCCCGCC | 61.331 | 65.000 | 0.00 | 0.00 | 35.41 | 6.13 |
243 | 244 | 0.324830 | AGGGCTCCTCTATATCCCGC | 60.325 | 60.000 | 0.00 | 0.00 | 41.76 | 6.13 |
244 | 245 | 2.242708 | ACTAGGGCTCCTCTATATCCCG | 59.757 | 54.545 | 0.00 | 0.00 | 41.76 | 5.14 |
245 | 246 | 3.530149 | AGACTAGGGCTCCTCTATATCCC | 59.470 | 52.174 | 0.00 | 0.00 | 34.61 | 3.85 |
246 | 247 | 4.477213 | AGAGACTAGGGCTCCTCTATATCC | 59.523 | 50.000 | 10.27 | 0.00 | 34.54 | 2.59 |
247 | 248 | 5.710409 | AGAGACTAGGGCTCCTCTATATC | 57.290 | 47.826 | 10.27 | 0.00 | 34.54 | 1.63 |
248 | 249 | 6.477901 | AAAGAGACTAGGGCTCCTCTATAT | 57.522 | 41.667 | 10.27 | 0.00 | 35.16 | 0.86 |
249 | 250 | 5.933846 | AAAGAGACTAGGGCTCCTCTATA | 57.066 | 43.478 | 10.27 | 0.00 | 35.16 | 1.31 |
250 | 251 | 4.825199 | AAAGAGACTAGGGCTCCTCTAT | 57.175 | 45.455 | 10.27 | 0.00 | 35.16 | 1.98 |
251 | 252 | 4.611564 | AAAAGAGACTAGGGCTCCTCTA | 57.388 | 45.455 | 10.27 | 0.00 | 35.16 | 2.43 |
252 | 253 | 3.483255 | AAAAGAGACTAGGGCTCCTCT | 57.517 | 47.619 | 10.27 | 0.00 | 37.58 | 3.69 |
271 | 272 | 1.603455 | CGCTGCCTCCTCCCAAAAA | 60.603 | 57.895 | 0.00 | 0.00 | 0.00 | 1.94 |
272 | 273 | 2.034066 | CGCTGCCTCCTCCCAAAA | 59.966 | 61.111 | 0.00 | 0.00 | 0.00 | 2.44 |
273 | 274 | 4.033776 | CCGCTGCCTCCTCCCAAA | 62.034 | 66.667 | 0.00 | 0.00 | 0.00 | 3.28 |
285 | 286 | 4.374702 | GACAACGCACAGCCGCTG | 62.375 | 66.667 | 19.08 | 19.08 | 37.52 | 5.18 |
286 | 287 | 4.908687 | TGACAACGCACAGCCGCT | 62.909 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
287 | 288 | 3.254014 | ATTGACAACGCACAGCCGC | 62.254 | 57.895 | 0.00 | 0.00 | 0.00 | 6.53 |
288 | 289 | 1.154413 | GATTGACAACGCACAGCCG | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
289 | 290 | 1.154413 | CGATTGACAACGCACAGCC | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
290 | 291 | 0.041312 | AACGATTGACAACGCACAGC | 60.041 | 50.000 | 9.20 | 0.00 | 0.00 | 4.40 |
291 | 292 | 1.003972 | ACAACGATTGACAACGCACAG | 60.004 | 47.619 | 9.20 | 2.26 | 0.00 | 3.66 |
292 | 293 | 1.010580 | ACAACGATTGACAACGCACA | 58.989 | 45.000 | 9.20 | 0.00 | 0.00 | 4.57 |
293 | 294 | 1.772966 | CAACAACGATTGACAACGCAC | 59.227 | 47.619 | 9.20 | 0.00 | 0.00 | 5.34 |
294 | 295 | 1.858000 | GCAACAACGATTGACAACGCA | 60.858 | 47.619 | 9.20 | 0.00 | 0.00 | 5.24 |
295 | 296 | 0.770008 | GCAACAACGATTGACAACGC | 59.230 | 50.000 | 9.20 | 0.00 | 0.00 | 4.84 |
296 | 297 | 2.098215 | TGCAACAACGATTGACAACG | 57.902 | 45.000 | 0.00 | 8.11 | 0.00 | 4.10 |
297 | 298 | 3.434637 | AGTTGCAACAACGATTGACAAC | 58.565 | 40.909 | 30.11 | 18.67 | 41.60 | 3.32 |
298 | 299 | 3.773860 | AGTTGCAACAACGATTGACAA | 57.226 | 38.095 | 30.11 | 0.00 | 0.00 | 3.18 |
299 | 300 | 3.119673 | ACAAGTTGCAACAACGATTGACA | 60.120 | 39.130 | 30.11 | 0.00 | 0.00 | 3.58 |
300 | 301 | 3.240401 | CACAAGTTGCAACAACGATTGAC | 59.760 | 43.478 | 30.11 | 0.63 | 0.00 | 3.18 |
301 | 302 | 3.433709 | CACAAGTTGCAACAACGATTGA | 58.566 | 40.909 | 30.11 | 0.00 | 0.00 | 2.57 |
302 | 303 | 2.535166 | CCACAAGTTGCAACAACGATTG | 59.465 | 45.455 | 30.11 | 24.76 | 0.00 | 2.67 |
303 | 304 | 2.481104 | CCCACAAGTTGCAACAACGATT | 60.481 | 45.455 | 30.11 | 13.31 | 0.00 | 3.34 |
304 | 305 | 1.066908 | CCCACAAGTTGCAACAACGAT | 59.933 | 47.619 | 30.11 | 7.43 | 0.00 | 3.73 |
305 | 306 | 0.453793 | CCCACAAGTTGCAACAACGA | 59.546 | 50.000 | 30.11 | 0.00 | 0.00 | 3.85 |
306 | 307 | 0.453793 | TCCCACAAGTTGCAACAACG | 59.546 | 50.000 | 30.11 | 19.45 | 0.00 | 4.10 |
307 | 308 | 2.663826 | TTCCCACAAGTTGCAACAAC | 57.336 | 45.000 | 30.11 | 5.54 | 0.00 | 3.32 |
308 | 309 | 2.564947 | ACTTTCCCACAAGTTGCAACAA | 59.435 | 40.909 | 30.11 | 11.86 | 32.81 | 2.83 |
309 | 310 | 2.094286 | CACTTTCCCACAAGTTGCAACA | 60.094 | 45.455 | 30.11 | 5.87 | 34.60 | 3.33 |
310 | 311 | 2.165437 | TCACTTTCCCACAAGTTGCAAC | 59.835 | 45.455 | 22.17 | 22.17 | 34.60 | 4.17 |
311 | 312 | 2.426738 | CTCACTTTCCCACAAGTTGCAA | 59.573 | 45.455 | 1.81 | 0.00 | 34.60 | 4.08 |
312 | 313 | 2.023673 | CTCACTTTCCCACAAGTTGCA | 58.976 | 47.619 | 1.81 | 0.00 | 34.60 | 4.08 |
313 | 314 | 2.297701 | TCTCACTTTCCCACAAGTTGC | 58.702 | 47.619 | 1.81 | 0.00 | 34.60 | 4.17 |
314 | 315 | 4.199310 | TCTTCTCACTTTCCCACAAGTTG | 58.801 | 43.478 | 0.00 | 0.00 | 34.60 | 3.16 |
315 | 316 | 4.503714 | TCTTCTCACTTTCCCACAAGTT | 57.496 | 40.909 | 0.00 | 0.00 | 34.60 | 2.66 |
316 | 317 | 4.503714 | TTCTTCTCACTTTCCCACAAGT | 57.496 | 40.909 | 0.00 | 0.00 | 37.49 | 3.16 |
317 | 318 | 5.008118 | GTCTTTCTTCTCACTTTCCCACAAG | 59.992 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
318 | 319 | 4.881850 | GTCTTTCTTCTCACTTTCCCACAA | 59.118 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
319 | 320 | 4.164221 | AGTCTTTCTTCTCACTTTCCCACA | 59.836 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
320 | 321 | 4.709250 | AGTCTTTCTTCTCACTTTCCCAC | 58.291 | 43.478 | 0.00 | 0.00 | 0.00 | 4.61 |
321 | 322 | 6.688073 | ATAGTCTTTCTTCTCACTTTCCCA | 57.312 | 37.500 | 0.00 | 0.00 | 0.00 | 4.37 |
322 | 323 | 6.752815 | CGTATAGTCTTTCTTCTCACTTTCCC | 59.247 | 42.308 | 0.00 | 0.00 | 0.00 | 3.97 |
323 | 324 | 7.536855 | TCGTATAGTCTTTCTTCTCACTTTCC | 58.463 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
324 | 325 | 9.015577 | CATCGTATAGTCTTTCTTCTCACTTTC | 57.984 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
325 | 326 | 7.489757 | GCATCGTATAGTCTTTCTTCTCACTTT | 59.510 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
326 | 327 | 6.975772 | GCATCGTATAGTCTTTCTTCTCACTT | 59.024 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
327 | 328 | 6.500041 | GCATCGTATAGTCTTTCTTCTCACT | 58.500 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
328 | 329 | 5.396947 | CGCATCGTATAGTCTTTCTTCTCAC | 59.603 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
329 | 330 | 5.511571 | CGCATCGTATAGTCTTTCTTCTCA | 58.488 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
330 | 331 | 4.380382 | GCGCATCGTATAGTCTTTCTTCTC | 59.620 | 45.833 | 0.30 | 0.00 | 0.00 | 2.87 |
331 | 332 | 4.202020 | TGCGCATCGTATAGTCTTTCTTCT | 60.202 | 41.667 | 5.66 | 0.00 | 0.00 | 2.85 |
332 | 333 | 4.042398 | TGCGCATCGTATAGTCTTTCTTC | 58.958 | 43.478 | 5.66 | 0.00 | 0.00 | 2.87 |
333 | 334 | 4.041740 | TGCGCATCGTATAGTCTTTCTT | 57.958 | 40.909 | 5.66 | 0.00 | 0.00 | 2.52 |
334 | 335 | 3.710326 | TGCGCATCGTATAGTCTTTCT | 57.290 | 42.857 | 5.66 | 0.00 | 0.00 | 2.52 |
335 | 336 | 3.981416 | TGATGCGCATCGTATAGTCTTTC | 59.019 | 43.478 | 37.23 | 17.22 | 40.63 | 2.62 |
336 | 337 | 3.977427 | TGATGCGCATCGTATAGTCTTT | 58.023 | 40.909 | 37.23 | 8.49 | 40.63 | 2.52 |
337 | 338 | 3.643159 | TGATGCGCATCGTATAGTCTT | 57.357 | 42.857 | 37.23 | 8.71 | 40.63 | 3.01 |
338 | 339 | 3.191371 | TCATGATGCGCATCGTATAGTCT | 59.809 | 43.478 | 37.28 | 15.98 | 40.63 | 3.24 |
339 | 340 | 3.501950 | TCATGATGCGCATCGTATAGTC | 58.498 | 45.455 | 37.28 | 19.01 | 40.63 | 2.59 |
340 | 341 | 3.575965 | TCATGATGCGCATCGTATAGT | 57.424 | 42.857 | 37.28 | 19.71 | 40.63 | 2.12 |
341 | 342 | 4.563976 | TGATTCATGATGCGCATCGTATAG | 59.436 | 41.667 | 37.28 | 27.07 | 40.63 | 1.31 |
342 | 343 | 4.493547 | TGATTCATGATGCGCATCGTATA | 58.506 | 39.130 | 37.28 | 28.51 | 40.63 | 1.47 |
343 | 344 | 3.328505 | TGATTCATGATGCGCATCGTAT | 58.671 | 40.909 | 37.28 | 29.36 | 40.63 | 3.06 |
344 | 345 | 2.733026 | CTGATTCATGATGCGCATCGTA | 59.267 | 45.455 | 37.28 | 26.47 | 40.63 | 3.43 |
345 | 346 | 1.529865 | CTGATTCATGATGCGCATCGT | 59.470 | 47.619 | 37.23 | 35.65 | 40.63 | 3.73 |
346 | 347 | 1.796459 | TCTGATTCATGATGCGCATCG | 59.204 | 47.619 | 37.23 | 26.95 | 40.63 | 3.84 |
347 | 348 | 3.426292 | CCATCTGATTCATGATGCGCATC | 60.426 | 47.826 | 37.43 | 37.43 | 38.84 | 3.91 |
348 | 349 | 2.488153 | CCATCTGATTCATGATGCGCAT | 59.512 | 45.455 | 25.66 | 25.66 | 38.84 | 4.73 |
349 | 350 | 1.877443 | CCATCTGATTCATGATGCGCA | 59.123 | 47.619 | 14.96 | 14.96 | 38.84 | 6.09 |
350 | 351 | 1.401148 | GCCATCTGATTCATGATGCGC | 60.401 | 52.381 | 0.00 | 0.00 | 38.84 | 6.09 |
351 | 352 | 2.152016 | AGCCATCTGATTCATGATGCG | 58.848 | 47.619 | 15.16 | 11.54 | 38.84 | 4.73 |
352 | 353 | 2.159824 | CGAGCCATCTGATTCATGATGC | 59.840 | 50.000 | 15.16 | 12.16 | 38.84 | 3.91 |
353 | 354 | 3.186613 | CACGAGCCATCTGATTCATGATG | 59.813 | 47.826 | 14.27 | 14.27 | 39.60 | 3.07 |
354 | 355 | 3.400255 | CACGAGCCATCTGATTCATGAT | 58.600 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
355 | 356 | 2.484241 | CCACGAGCCATCTGATTCATGA | 60.484 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
356 | 357 | 1.871676 | CCACGAGCCATCTGATTCATG | 59.128 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
357 | 358 | 1.202734 | CCCACGAGCCATCTGATTCAT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
358 | 359 | 0.178767 | CCCACGAGCCATCTGATTCA | 59.821 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
359 | 360 | 1.162800 | GCCCACGAGCCATCTGATTC | 61.163 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
360 | 361 | 1.153086 | GCCCACGAGCCATCTGATT | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
361 | 362 | 2.507944 | GCCCACGAGCCATCTGAT | 59.492 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
378 | 379 | 1.468914 | GTCTTTCTAAAAGCCAGCCGG | 59.531 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
379 | 380 | 1.468914 | GGTCTTTCTAAAAGCCAGCCG | 59.531 | 52.381 | 7.55 | 0.00 | 0.00 | 5.52 |
380 | 381 | 2.796557 | AGGTCTTTCTAAAAGCCAGCC | 58.203 | 47.619 | 12.30 | 5.49 | 0.00 | 4.85 |
381 | 382 | 3.375610 | GCTAGGTCTTTCTAAAAGCCAGC | 59.624 | 47.826 | 12.30 | 13.17 | 0.00 | 4.85 |
382 | 383 | 4.393371 | GTGCTAGGTCTTTCTAAAAGCCAG | 59.607 | 45.833 | 12.30 | 9.53 | 0.00 | 4.85 |
383 | 384 | 4.324267 | GTGCTAGGTCTTTCTAAAAGCCA | 58.676 | 43.478 | 12.30 | 2.78 | 0.00 | 4.75 |
384 | 385 | 3.371285 | CGTGCTAGGTCTTTCTAAAAGCC | 59.629 | 47.826 | 0.00 | 0.91 | 0.00 | 4.35 |
385 | 386 | 3.181519 | GCGTGCTAGGTCTTTCTAAAAGC | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
386 | 387 | 3.371285 | GGCGTGCTAGGTCTTTCTAAAAG | 59.629 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
387 | 388 | 3.332034 | GGCGTGCTAGGTCTTTCTAAAA | 58.668 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
388 | 389 | 2.354403 | GGGCGTGCTAGGTCTTTCTAAA | 60.354 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
389 | 390 | 1.206371 | GGGCGTGCTAGGTCTTTCTAA | 59.794 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
390 | 391 | 0.822164 | GGGCGTGCTAGGTCTTTCTA | 59.178 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
391 | 392 | 1.597461 | GGGCGTGCTAGGTCTTTCT | 59.403 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
392 | 393 | 1.449778 | GGGGCGTGCTAGGTCTTTC | 60.450 | 63.158 | 0.00 | 0.00 | 0.00 | 2.62 |
393 | 394 | 1.900545 | GAGGGGCGTGCTAGGTCTTT | 61.901 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
394 | 395 | 2.284699 | AGGGGCGTGCTAGGTCTT | 60.285 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
395 | 396 | 2.760385 | GAGGGGCGTGCTAGGTCT | 60.760 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
396 | 397 | 3.851128 | GGAGGGGCGTGCTAGGTC | 61.851 | 72.222 | 0.00 | 0.00 | 0.00 | 3.85 |
397 | 398 | 3.925914 | AAGGAGGGGCGTGCTAGGT | 62.926 | 63.158 | 0.00 | 0.00 | 0.00 | 3.08 |
398 | 399 | 2.198304 | AAAAGGAGGGGCGTGCTAGG | 62.198 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
399 | 400 | 0.322546 | AAAAAGGAGGGGCGTGCTAG | 60.323 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
400 | 401 | 0.608035 | CAAAAAGGAGGGGCGTGCTA | 60.608 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
401 | 402 | 1.903404 | CAAAAAGGAGGGGCGTGCT | 60.903 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
402 | 403 | 1.460273 | TTCAAAAAGGAGGGGCGTGC | 61.460 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
403 | 404 | 1.036707 | TTTCAAAAAGGAGGGGCGTG | 58.963 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
404 | 405 | 1.783071 | TTTTCAAAAAGGAGGGGCGT | 58.217 | 45.000 | 0.00 | 0.00 | 0.00 | 5.68 |
405 | 406 | 2.671070 | CGATTTTCAAAAAGGAGGGGCG | 60.671 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
406 | 407 | 2.930887 | GCGATTTTCAAAAAGGAGGGGC | 60.931 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
407 | 408 | 2.562738 | AGCGATTTTCAAAAAGGAGGGG | 59.437 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
408 | 409 | 3.942130 | AGCGATTTTCAAAAAGGAGGG | 57.058 | 42.857 | 0.00 | 0.00 | 0.00 | 4.30 |
409 | 410 | 5.125417 | TCCATAGCGATTTTCAAAAAGGAGG | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
410 | 411 | 6.194796 | TCCATAGCGATTTTCAAAAAGGAG | 57.805 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
411 | 412 | 6.386654 | GTTCCATAGCGATTTTCAAAAAGGA | 58.613 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
412 | 413 | 5.576774 | GGTTCCATAGCGATTTTCAAAAAGG | 59.423 | 40.000 | 0.00 | 0.00 | 0.00 | 3.11 |
413 | 414 | 6.155827 | TGGTTCCATAGCGATTTTCAAAAAG | 58.844 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
414 | 415 | 6.090483 | TGGTTCCATAGCGATTTTCAAAAA | 57.910 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
415 | 416 | 5.713792 | TGGTTCCATAGCGATTTTCAAAA | 57.286 | 34.783 | 0.00 | 0.00 | 0.00 | 2.44 |
425 | 426 | 3.296322 | TTTGCTTTTGGTTCCATAGCG | 57.704 | 42.857 | 16.14 | 0.00 | 0.00 | 4.26 |
548 | 551 | 1.153369 | CATGCACCCGGTCTACCAG | 60.153 | 63.158 | 0.00 | 0.00 | 35.14 | 4.00 |
578 | 581 | 6.469410 | TCTCTACGATTTGTGGGTTGTTAAT | 58.531 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
762 | 776 | 4.308458 | TGGCGGACGTGGTTGGAG | 62.308 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
863 | 878 | 4.971125 | GCGGGGCATACGAGGAGC | 62.971 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
1596 | 2019 | 1.447838 | GCCGCAGCTGTAGCAGTTA | 60.448 | 57.895 | 20.84 | 0.00 | 45.16 | 2.24 |
1714 | 2387 | 4.394712 | GCCGCAGTGGTAGCAGGT | 62.395 | 66.667 | 0.89 | 0.00 | 41.21 | 4.00 |
1994 | 2683 | 5.124138 | ACCTTAGACATCAACTGAGAGTACG | 59.876 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2012 | 2701 | 4.590850 | TCCATCATCATCACGACCTTAG | 57.409 | 45.455 | 0.00 | 0.00 | 0.00 | 2.18 |
2142 | 2833 | 8.037382 | TGACAAGAGAGAATTCATTCATTCAC | 57.963 | 34.615 | 8.44 | 0.00 | 39.23 | 3.18 |
2193 | 2892 | 6.097554 | CAGGATGTCAGACAGAGGTAATAGTT | 59.902 | 42.308 | 9.64 | 0.00 | 0.00 | 2.24 |
2242 | 2941 | 5.217978 | TCGCCTTCCAAACTCTACTTTAA | 57.782 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
2244 | 2943 | 3.764237 | TCGCCTTCCAAACTCTACTTT | 57.236 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
2250 | 2949 | 5.063564 | CACTAGTTAATCGCCTTCCAAACTC | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2262 | 2961 | 6.097356 | TGAAAGTACCAGCACTAGTTAATCG | 58.903 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2330 | 3032 | 0.108138 | CTTTCCCCTCCACTACGCAG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2331 | 3033 | 0.834687 | ACTTTCCCCTCCACTACGCA | 60.835 | 55.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2370 | 3073 | 2.812836 | TTCCCCGGATTAAAAGGGTC | 57.187 | 50.000 | 0.73 | 0.00 | 43.58 | 4.46 |
2388 | 3091 | 2.711542 | CTTACCCCAGATTGACGCTTT | 58.288 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
2461 | 3165 | 3.138283 | ACTGACAGGAAAGTGGATCCAAA | 59.862 | 43.478 | 18.20 | 0.00 | 39.55 | 3.28 |
2502 | 3206 | 3.254166 | CCAGACACAGTGCAAGCTTAAAT | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2511 | 3215 | 1.070275 | CAGAGCCAGACACAGTGCA | 59.930 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
2554 | 3259 | 5.830799 | ATTGTGCTGGAGATGTATATGGA | 57.169 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2578 | 3283 | 9.013490 | CAGAACAAAGATGTAAAACAACTTCTG | 57.987 | 33.333 | 3.47 | 3.64 | 39.78 | 3.02 |
2615 | 4384 | 3.614092 | ACCTATCACAACAGCAATCCAG | 58.386 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2625 | 4394 | 3.924686 | CGGTGTTACAGACCTATCACAAC | 59.075 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2629 | 4398 | 3.693807 | ACTCGGTGTTACAGACCTATCA | 58.306 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
2635 | 4404 | 4.552184 | GCAGAAAAACTCGGTGTTACAGAC | 60.552 | 45.833 | 0.00 | 0.00 | 38.03 | 3.51 |
2642 | 4411 | 0.463116 | ACGGCAGAAAAACTCGGTGT | 60.463 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2643 | 4412 | 0.661020 | AACGGCAGAAAAACTCGGTG | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2646 | 4415 | 2.798283 | TGTCTAACGGCAGAAAAACTCG | 59.202 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
2647 | 4416 | 3.808174 | AGTGTCTAACGGCAGAAAAACTC | 59.192 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2659 | 4430 | 5.163754 | GGGGATTGAAATTCAGTGTCTAACG | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2661 | 4432 | 5.710099 | GTGGGGATTGAAATTCAGTGTCTAA | 59.290 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2707 | 4479 | 4.443034 | GCCGTCCCAGACTATAATTCAAGT | 60.443 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
2709 | 4481 | 3.452990 | TGCCGTCCCAGACTATAATTCAA | 59.547 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
2717 | 4489 | 0.396556 | TGCTATGCCGTCCCAGACTA | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2718 | 4490 | 1.050988 | ATGCTATGCCGTCCCAGACT | 61.051 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2731 | 4503 | 3.623060 | CCAAGACGCAACAGTAATGCTAT | 59.377 | 43.478 | 0.00 | 0.00 | 41.64 | 2.97 |
2733 | 4505 | 1.806542 | CCAAGACGCAACAGTAATGCT | 59.193 | 47.619 | 0.00 | 0.00 | 41.64 | 3.79 |
2749 | 4521 | 1.602237 | ATCTACACGCCCCACCAAG | 59.398 | 57.895 | 0.00 | 0.00 | 0.00 | 3.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.