Multiple sequence alignment - TraesCS6D01G067000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G067000 chr6D 100.000 5026 0 0 1 5026 32874389 32869364 0.000000e+00 9282.0
1 TraesCS6D01G067000 chr6D 99.363 785 5 0 4242 5026 266786989 266787773 0.000000e+00 1423.0
2 TraesCS6D01G067000 chr6D 80.527 683 102 22 1603 2269 32871527 32870860 3.490000e-136 496.0
3 TraesCS6D01G067000 chr6D 80.470 681 106 19 2863 3530 32872787 32872121 3.490000e-136 496.0
4 TraesCS6D01G067000 chr6A 92.421 3866 195 47 458 4243 37449210 37445363 0.000000e+00 5426.0
5 TraesCS6D01G067000 chr6A 80.059 682 110 17 1603 2269 37446747 37446077 2.720000e-132 483.0
6 TraesCS6D01G067000 chr6A 79.912 682 108 20 2864 3530 37448011 37447344 1.640000e-129 473.0
7 TraesCS6D01G067000 chr6A 97.059 34 1 0 762 795 611106738 611106705 1.950000e-04 58.4
8 TraesCS6D01G067000 chr6B 93.829 3387 146 28 882 4243 69464426 69461078 0.000000e+00 5038.0
9 TraesCS6D01G067000 chr6B 80.735 680 104 18 2864 3530 69463724 69463059 5.810000e-139 505.0
10 TraesCS6D01G067000 chr3D 99.241 790 5 1 4237 5026 47795059 47794271 0.000000e+00 1424.0
11 TraesCS6D01G067000 chr3D 99.363 785 5 0 4242 5026 374972175 374972959 0.000000e+00 1423.0
12 TraesCS6D01G067000 chr3D 99.235 784 6 0 4243 5026 422537174 422537957 0.000000e+00 1415.0
13 TraesCS6D01G067000 chr1D 99.236 785 6 0 4242 5026 344161316 344160532 0.000000e+00 1417.0
14 TraesCS6D01G067000 chr1D 99.235 784 6 0 4243 5026 163670338 163671121 0.000000e+00 1415.0
15 TraesCS6D01G067000 chr1D 98.866 794 8 1 4233 5026 207157540 207156748 0.000000e+00 1415.0
16 TraesCS6D01G067000 chr5D 99.109 786 7 0 4241 5026 121078669 121079454 0.000000e+00 1413.0
17 TraesCS6D01G067000 chr4D 98.739 793 8 2 4234 5025 472673427 472674218 0.000000e+00 1408.0
18 TraesCS6D01G067000 chr1A 94.737 38 2 0 760 797 90111486 90111523 5.430000e-05 60.2
19 TraesCS6D01G067000 chr3A 92.500 40 1 2 767 804 552705869 552705830 7.030000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G067000 chr6D 32869364 32874389 5025 True 3424.666667 9282 86.999000 1 5026 3 chr6D.!!$R1 5025
1 TraesCS6D01G067000 chr6D 266786989 266787773 784 False 1423.000000 1423 99.363000 4242 5026 1 chr6D.!!$F1 784
2 TraesCS6D01G067000 chr6A 37445363 37449210 3847 True 2127.333333 5426 84.130667 458 4243 3 chr6A.!!$R2 3785
3 TraesCS6D01G067000 chr6B 69461078 69464426 3348 True 2771.500000 5038 87.282000 882 4243 2 chr6B.!!$R1 3361
4 TraesCS6D01G067000 chr3D 47794271 47795059 788 True 1424.000000 1424 99.241000 4237 5026 1 chr3D.!!$R1 789
5 TraesCS6D01G067000 chr3D 374972175 374972959 784 False 1423.000000 1423 99.363000 4242 5026 1 chr3D.!!$F1 784
6 TraesCS6D01G067000 chr3D 422537174 422537957 783 False 1415.000000 1415 99.235000 4243 5026 1 chr3D.!!$F2 783
7 TraesCS6D01G067000 chr1D 344160532 344161316 784 True 1417.000000 1417 99.236000 4242 5026 1 chr1D.!!$R2 784
8 TraesCS6D01G067000 chr1D 163670338 163671121 783 False 1415.000000 1415 99.235000 4243 5026 1 chr1D.!!$F1 783
9 TraesCS6D01G067000 chr1D 207156748 207157540 792 True 1415.000000 1415 98.866000 4233 5026 1 chr1D.!!$R1 793
10 TraesCS6D01G067000 chr5D 121078669 121079454 785 False 1413.000000 1413 99.109000 4241 5026 1 chr5D.!!$F1 785
11 TraesCS6D01G067000 chr4D 472673427 472674218 791 False 1408.000000 1408 98.739000 4234 5025 1 chr4D.!!$F1 791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
358 359 0.034896 GCCAGAACTCAGAAACCGGA 59.965 55.0 9.46 0.0 0.00 5.14 F
1573 1647 0.178981 GCATACATCCATGGTGCCCT 60.179 55.0 12.58 0.0 37.48 5.19 F
1589 1663 0.179048 CCCTCTGTGTTGTGCAGACA 60.179 55.0 0.00 0.0 37.98 3.41 F
2317 2417 0.320334 TTCGGCTTGACGATGAAGCA 60.320 50.0 15.92 0.0 46.43 3.91 F
3546 3656 0.387929 TCCAGACACGTCCAACTCAC 59.612 55.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 1768 0.179004 ATGTGCCGTTGTTTCCCTGA 60.179 50.0 0.00 0.00 0.00 3.86 R
2672 2776 0.118346 TACTCCAGGCCTTCCAGGAA 59.882 55.0 0.00 0.71 45.99 3.36 R
3546 3656 1.926511 GCTTCACCATCAGGCCAACG 61.927 60.0 5.01 0.00 39.06 4.10 R
3988 4098 0.305009 TCGTCGAGCGATGATCTCAC 59.695 55.0 10.46 0.00 45.68 3.51 R
4479 4591 2.851263 ATGTGCCTTCCGAGTTACAA 57.149 45.0 0.00 0.00 0.00 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.951954 CTTATTAGATTCGACACGCTTATACT 57.048 34.615 0.00 0.00 0.00 2.12
26 27 9.395707 CTTATTAGATTCGACACGCTTATACTT 57.604 33.333 0.00 0.00 0.00 2.24
29 30 8.945758 TTAGATTCGACACGCTTATACTTATC 57.054 34.615 0.00 0.00 0.00 1.75
30 31 6.967135 AGATTCGACACGCTTATACTTATCA 58.033 36.000 0.00 0.00 0.00 2.15
31 32 7.423199 AGATTCGACACGCTTATACTTATCAA 58.577 34.615 0.00 0.00 0.00 2.57
32 33 7.919091 AGATTCGACACGCTTATACTTATCAAA 59.081 33.333 0.00 0.00 0.00 2.69
33 34 6.801367 TCGACACGCTTATACTTATCAAAC 57.199 37.500 0.00 0.00 0.00 2.93
34 35 6.324042 TCGACACGCTTATACTTATCAAACA 58.676 36.000 0.00 0.00 0.00 2.83
35 36 6.807720 TCGACACGCTTATACTTATCAAACAA 59.192 34.615 0.00 0.00 0.00 2.83
36 37 7.490079 TCGACACGCTTATACTTATCAAACAAT 59.510 33.333 0.00 0.00 0.00 2.71
37 38 7.579093 CGACACGCTTATACTTATCAAACAATG 59.421 37.037 0.00 0.00 0.00 2.82
38 39 8.487313 ACACGCTTATACTTATCAAACAATGA 57.513 30.769 0.00 0.00 43.67 2.57
62 63 9.987272 TGATATGATAAATCTCCTACACTTGTG 57.013 33.333 0.00 0.00 0.00 3.33
63 64 9.429359 GATATGATAAATCTCCTACACTTGTGG 57.571 37.037 5.72 0.00 0.00 4.17
64 65 5.989477 TGATAAATCTCCTACACTTGTGGG 58.011 41.667 5.42 5.42 46.68 4.61
65 66 5.487488 TGATAAATCTCCTACACTTGTGGGT 59.513 40.000 11.19 0.00 45.63 4.51
66 67 4.724279 AAATCTCCTACACTTGTGGGTT 57.276 40.909 11.19 0.00 45.63 4.11
67 68 3.703001 ATCTCCTACACTTGTGGGTTG 57.297 47.619 11.19 6.46 45.63 3.77
68 69 2.404559 TCTCCTACACTTGTGGGTTGT 58.595 47.619 11.19 0.00 45.63 3.32
69 70 2.367567 TCTCCTACACTTGTGGGTTGTC 59.632 50.000 11.19 0.00 45.63 3.18
70 71 2.104111 CTCCTACACTTGTGGGTTGTCA 59.896 50.000 11.19 0.00 45.63 3.58
71 72 2.158871 TCCTACACTTGTGGGTTGTCAC 60.159 50.000 11.19 0.00 45.63 3.67
72 73 2.158813 CCTACACTTGTGGGTTGTCACT 60.159 50.000 3.63 0.00 41.21 3.41
73 74 3.070446 CCTACACTTGTGGGTTGTCACTA 59.930 47.826 3.63 0.00 41.21 2.74
74 75 3.194005 ACACTTGTGGGTTGTCACTAG 57.806 47.619 5.72 0.00 42.95 2.57
75 76 1.873591 CACTTGTGGGTTGTCACTAGC 59.126 52.381 6.41 0.00 41.73 3.42
76 77 1.202770 ACTTGTGGGTTGTCACTAGCC 60.203 52.381 0.00 0.00 41.73 3.93
77 78 0.840617 TTGTGGGTTGTCACTAGCCA 59.159 50.000 6.03 6.03 40.64 4.75
78 79 0.840617 TGTGGGTTGTCACTAGCCAA 59.159 50.000 11.95 0.56 44.09 4.52
79 80 1.213182 TGTGGGTTGTCACTAGCCAAA 59.787 47.619 11.95 3.77 44.09 3.28
80 81 2.158534 TGTGGGTTGTCACTAGCCAAAT 60.159 45.455 11.95 0.00 44.09 2.32
81 82 3.073209 TGTGGGTTGTCACTAGCCAAATA 59.927 43.478 11.95 0.00 44.09 1.40
82 83 4.263727 TGTGGGTTGTCACTAGCCAAATAT 60.264 41.667 11.95 0.00 44.09 1.28
83 84 5.045505 TGTGGGTTGTCACTAGCCAAATATA 60.046 40.000 11.95 0.00 44.09 0.86
84 85 6.062095 GTGGGTTGTCACTAGCCAAATATAT 58.938 40.000 11.95 0.00 44.09 0.86
85 86 6.546034 GTGGGTTGTCACTAGCCAAATATATT 59.454 38.462 11.95 0.00 44.09 1.28
86 87 7.068226 GTGGGTTGTCACTAGCCAAATATATTT 59.932 37.037 11.95 4.81 44.09 1.40
87 88 7.617723 TGGGTTGTCACTAGCCAAATATATTTT 59.382 33.333 7.78 0.00 40.01 1.82
88 89 8.474831 GGGTTGTCACTAGCCAAATATATTTTT 58.525 33.333 8.01 0.79 33.39 1.94
89 90 9.301153 GGTTGTCACTAGCCAAATATATTTTTG 57.699 33.333 8.01 10.64 36.55 2.44
90 91 9.855021 GTTGTCACTAGCCAAATATATTTTTGT 57.145 29.630 8.01 0.00 35.30 2.83
91 92 9.853555 TTGTCACTAGCCAAATATATTTTTGTG 57.146 29.630 8.01 10.98 35.30 3.33
92 93 8.465999 TGTCACTAGCCAAATATATTTTTGTGG 58.534 33.333 8.01 8.50 35.30 4.17
93 94 7.435192 GTCACTAGCCAAATATATTTTTGTGGC 59.565 37.037 23.05 23.05 36.14 5.01
94 95 6.417635 CACTAGCCAAATATATTTTTGTGGCG 59.582 38.462 23.70 16.77 39.03 5.69
95 96 5.590530 AGCCAAATATATTTTTGTGGCGA 57.409 34.783 23.70 0.00 39.03 5.54
96 97 5.971763 AGCCAAATATATTTTTGTGGCGAA 58.028 33.333 23.70 0.00 39.03 4.70
97 98 6.042143 AGCCAAATATATTTTTGTGGCGAAG 58.958 36.000 23.70 5.84 39.03 3.79
98 99 5.234116 GCCAAATATATTTTTGTGGCGAAGG 59.766 40.000 18.53 10.02 35.30 3.46
99 100 5.234116 CCAAATATATTTTTGTGGCGAAGGC 59.766 40.000 8.01 0.00 42.44 4.35
100 101 7.666306 CCAAATATATTTTTGTGGCGAAGGCC 61.666 42.308 8.01 0.00 44.56 5.19
111 112 0.668535 GCGAAGGCCATATCAAACCC 59.331 55.000 5.01 0.00 0.00 4.11
112 113 1.750682 GCGAAGGCCATATCAAACCCT 60.751 52.381 5.01 0.00 0.00 4.34
113 114 2.486548 GCGAAGGCCATATCAAACCCTA 60.487 50.000 5.01 0.00 0.00 3.53
114 115 3.139077 CGAAGGCCATATCAAACCCTAC 58.861 50.000 5.01 0.00 0.00 3.18
115 116 3.487372 GAAGGCCATATCAAACCCTACC 58.513 50.000 5.01 0.00 0.00 3.18
116 117 2.789219 AGGCCATATCAAACCCTACCT 58.211 47.619 5.01 0.00 0.00 3.08
117 118 3.131252 AGGCCATATCAAACCCTACCTT 58.869 45.455 5.01 0.00 0.00 3.50
118 119 3.531814 AGGCCATATCAAACCCTACCTTT 59.468 43.478 5.01 0.00 0.00 3.11
119 120 3.636764 GGCCATATCAAACCCTACCTTTG 59.363 47.826 0.00 0.00 0.00 2.77
120 121 3.636764 GCCATATCAAACCCTACCTTTGG 59.363 47.826 0.00 0.00 30.78 3.28
121 122 4.630184 GCCATATCAAACCCTACCTTTGGA 60.630 45.833 0.00 0.00 30.78 3.53
122 123 5.705400 CCATATCAAACCCTACCTTTGGAT 58.295 41.667 0.00 0.00 30.78 3.41
123 124 6.693045 GCCATATCAAACCCTACCTTTGGATA 60.693 42.308 0.00 0.00 30.78 2.59
124 125 6.942576 CCATATCAAACCCTACCTTTGGATAG 59.057 42.308 0.00 0.00 30.78 2.08
125 126 4.230745 TCAAACCCTACCTTTGGATAGC 57.769 45.455 0.00 0.00 30.78 2.97
126 127 3.589735 TCAAACCCTACCTTTGGATAGCA 59.410 43.478 0.00 0.00 30.78 3.49
127 128 4.043561 TCAAACCCTACCTTTGGATAGCAA 59.956 41.667 0.00 0.00 30.78 3.91
128 129 4.668138 AACCCTACCTTTGGATAGCAAA 57.332 40.909 0.00 0.00 0.00 3.68
129 130 4.236527 ACCCTACCTTTGGATAGCAAAG 57.763 45.455 0.00 0.00 38.86 2.77
130 131 2.952310 CCCTACCTTTGGATAGCAAAGC 59.048 50.000 0.00 0.00 38.08 3.51
131 132 3.620488 CCTACCTTTGGATAGCAAAGCA 58.380 45.455 0.00 0.00 38.08 3.91
132 133 3.378427 CCTACCTTTGGATAGCAAAGCAC 59.622 47.826 0.00 0.00 38.08 4.40
133 134 2.875296 ACCTTTGGATAGCAAAGCACA 58.125 42.857 0.00 0.00 38.08 4.57
134 135 3.230134 ACCTTTGGATAGCAAAGCACAA 58.770 40.909 0.00 0.00 38.08 3.33
135 136 3.256631 ACCTTTGGATAGCAAAGCACAAG 59.743 43.478 0.00 0.00 38.08 3.16
136 137 3.367703 CCTTTGGATAGCAAAGCACAAGG 60.368 47.826 0.00 0.00 38.08 3.61
137 138 1.838112 TGGATAGCAAAGCACAAGGG 58.162 50.000 0.00 0.00 0.00 3.95
138 139 1.075374 TGGATAGCAAAGCACAAGGGT 59.925 47.619 0.00 0.00 0.00 4.34
139 140 2.171003 GGATAGCAAAGCACAAGGGTT 58.829 47.619 0.00 0.00 39.32 4.11
141 142 3.367395 GGATAGCAAAGCACAAGGGTTTC 60.367 47.826 0.00 0.00 44.94 2.78
142 143 1.484038 AGCAAAGCACAAGGGTTTCA 58.516 45.000 0.00 0.00 44.94 2.69
143 144 2.041701 AGCAAAGCACAAGGGTTTCAT 58.958 42.857 0.00 0.00 44.94 2.57
144 145 2.435437 AGCAAAGCACAAGGGTTTCATT 59.565 40.909 0.00 0.00 44.94 2.57
145 146 3.640967 AGCAAAGCACAAGGGTTTCATTA 59.359 39.130 0.00 0.00 44.94 1.90
146 147 4.100808 AGCAAAGCACAAGGGTTTCATTAA 59.899 37.500 0.00 0.00 44.94 1.40
147 148 4.996758 GCAAAGCACAAGGGTTTCATTAAT 59.003 37.500 0.00 0.00 44.94 1.40
148 149 5.469760 GCAAAGCACAAGGGTTTCATTAATT 59.530 36.000 0.00 0.00 44.94 1.40
149 150 6.566376 GCAAAGCACAAGGGTTTCATTAATTG 60.566 38.462 0.00 0.00 44.94 2.32
150 151 6.418057 AAGCACAAGGGTTTCATTAATTGA 57.582 33.333 0.00 0.00 32.04 2.57
151 152 6.610075 AGCACAAGGGTTTCATTAATTGAT 57.390 33.333 0.00 0.00 33.34 2.57
152 153 6.400568 AGCACAAGGGTTTCATTAATTGATG 58.599 36.000 3.85 3.85 33.34 3.07
153 154 5.581874 GCACAAGGGTTTCATTAATTGATGG 59.418 40.000 10.06 0.00 33.34 3.51
154 155 6.574073 GCACAAGGGTTTCATTAATTGATGGA 60.574 38.462 10.06 0.00 33.34 3.41
155 156 7.037438 CACAAGGGTTTCATTAATTGATGGAG 58.963 38.462 10.06 0.00 33.34 3.86
156 157 5.859205 AGGGTTTCATTAATTGATGGAGC 57.141 39.130 10.06 3.79 33.34 4.70
157 158 5.271598 AGGGTTTCATTAATTGATGGAGCA 58.728 37.500 10.06 0.00 33.34 4.26
158 159 5.901276 AGGGTTTCATTAATTGATGGAGCAT 59.099 36.000 10.06 4.70 33.34 3.79
159 160 6.384886 AGGGTTTCATTAATTGATGGAGCATT 59.615 34.615 10.06 0.00 33.34 3.56
160 161 6.480981 GGGTTTCATTAATTGATGGAGCATTG 59.519 38.462 10.06 0.00 33.34 2.82
161 162 6.018507 GGTTTCATTAATTGATGGAGCATTGC 60.019 38.462 10.06 0.00 33.34 3.56
162 163 6.474140 TTCATTAATTGATGGAGCATTGCT 57.526 33.333 11.79 11.79 36.32 3.91
163 164 7.585579 TTCATTAATTGATGGAGCATTGCTA 57.414 32.000 11.96 0.00 34.55 3.49
164 165 7.770366 TCATTAATTGATGGAGCATTGCTAT 57.230 32.000 11.96 1.95 39.88 2.97
165 166 8.866970 TCATTAATTGATGGAGCATTGCTATA 57.133 30.769 11.96 3.90 39.88 1.31
166 167 8.953313 TCATTAATTGATGGAGCATTGCTATAG 58.047 33.333 11.96 0.00 39.88 1.31
167 168 8.737175 CATTAATTGATGGAGCATTGCTATAGT 58.263 33.333 11.96 0.00 39.88 2.12
168 169 6.814506 AATTGATGGAGCATTGCTATAGTC 57.185 37.500 11.96 8.27 39.88 2.59
169 170 4.961438 TGATGGAGCATTGCTATAGTCA 57.039 40.909 11.96 10.66 39.88 3.41
170 171 5.294734 TGATGGAGCATTGCTATAGTCAA 57.705 39.130 11.96 10.63 39.88 3.18
171 172 5.683681 TGATGGAGCATTGCTATAGTCAAA 58.316 37.500 11.96 1.66 39.88 2.69
172 173 6.301486 TGATGGAGCATTGCTATAGTCAAAT 58.699 36.000 11.96 0.00 39.88 2.32
173 174 7.452562 TGATGGAGCATTGCTATAGTCAAATA 58.547 34.615 11.96 0.00 39.88 1.40
174 175 7.938490 TGATGGAGCATTGCTATAGTCAAATAA 59.062 33.333 11.96 0.00 39.88 1.40
175 176 8.696043 ATGGAGCATTGCTATAGTCAAATAAA 57.304 30.769 11.96 1.03 39.88 1.40
176 177 7.930217 TGGAGCATTGCTATAGTCAAATAAAC 58.070 34.615 11.96 0.00 39.88 2.01
177 178 7.072030 GGAGCATTGCTATAGTCAAATAAACG 58.928 38.462 11.96 0.00 39.88 3.60
178 179 7.254795 GGAGCATTGCTATAGTCAAATAAACGT 60.255 37.037 11.96 0.00 39.88 3.99
179 180 8.657074 AGCATTGCTATAGTCAAATAAACGTA 57.343 30.769 10.00 0.00 36.99 3.57
180 181 8.548721 AGCATTGCTATAGTCAAATAAACGTAC 58.451 33.333 10.00 0.00 36.99 3.67
181 182 8.548721 GCATTGCTATAGTCAAATAAACGTACT 58.451 33.333 11.80 0.00 0.00 2.73
184 185 8.638685 TGCTATAGTCAAATAAACGTACTTCC 57.361 34.615 0.84 0.00 0.00 3.46
185 186 8.252417 TGCTATAGTCAAATAAACGTACTTCCA 58.748 33.333 0.84 0.00 0.00 3.53
186 187 8.538039 GCTATAGTCAAATAAACGTACTTCCAC 58.462 37.037 0.84 0.00 0.00 4.02
187 188 9.577110 CTATAGTCAAATAAACGTACTTCCACA 57.423 33.333 0.00 0.00 0.00 4.17
189 190 7.739498 AGTCAAATAAACGTACTTCCACATT 57.261 32.000 0.00 0.00 0.00 2.71
190 191 8.836268 AGTCAAATAAACGTACTTCCACATTA 57.164 30.769 0.00 0.00 0.00 1.90
191 192 9.275398 AGTCAAATAAACGTACTTCCACATTAA 57.725 29.630 0.00 0.00 0.00 1.40
192 193 9.881529 GTCAAATAAACGTACTTCCACATTAAA 57.118 29.630 0.00 0.00 0.00 1.52
199 200 8.795842 AACGTACTTCCACATTAAATATTGGA 57.204 30.769 0.00 0.00 36.31 3.53
200 201 8.974060 ACGTACTTCCACATTAAATATTGGAT 57.026 30.769 0.00 0.00 37.97 3.41
201 202 9.052759 ACGTACTTCCACATTAAATATTGGATC 57.947 33.333 0.00 0.00 37.97 3.36
202 203 8.504005 CGTACTTCCACATTAAATATTGGATCC 58.496 37.037 4.20 4.20 37.97 3.36
203 204 9.349713 GTACTTCCACATTAAATATTGGATCCA 57.650 33.333 11.44 11.44 37.97 3.41
204 205 8.237811 ACTTCCACATTAAATATTGGATCCAC 57.762 34.615 15.91 0.00 37.97 4.02
205 206 7.287696 ACTTCCACATTAAATATTGGATCCACC 59.712 37.037 15.91 0.00 37.97 4.61
206 207 6.921412 TCCACATTAAATATTGGATCCACCT 58.079 36.000 15.91 7.64 39.86 4.00
207 208 8.051468 TCCACATTAAATATTGGATCCACCTA 57.949 34.615 15.91 9.84 39.86 3.08
208 209 8.163408 TCCACATTAAATATTGGATCCACCTAG 58.837 37.037 15.91 0.39 39.86 3.02
209 210 8.163408 CCACATTAAATATTGGATCCACCTAGA 58.837 37.037 15.91 0.00 39.86 2.43
210 211 9.003658 CACATTAAATATTGGATCCACCTAGAC 57.996 37.037 15.91 0.00 39.86 2.59
211 212 8.164070 ACATTAAATATTGGATCCACCTAGACC 58.836 37.037 15.91 0.00 39.86 3.85
212 213 7.699709 TTAAATATTGGATCCACCTAGACCA 57.300 36.000 15.91 0.00 39.86 4.02
213 214 5.568620 AATATTGGATCCACCTAGACCAC 57.431 43.478 15.91 0.00 39.86 4.16
214 215 1.191535 TTGGATCCACCTAGACCACG 58.808 55.000 15.91 0.00 39.86 4.94
215 216 0.333652 TGGATCCACCTAGACCACGA 59.666 55.000 11.44 0.00 39.86 4.35
216 217 1.272816 TGGATCCACCTAGACCACGAA 60.273 52.381 11.44 0.00 39.86 3.85
217 218 1.409427 GGATCCACCTAGACCACGAAG 59.591 57.143 6.95 0.00 35.41 3.79
218 219 2.376109 GATCCACCTAGACCACGAAGA 58.624 52.381 0.00 0.00 0.00 2.87
219 220 2.526888 TCCACCTAGACCACGAAGAT 57.473 50.000 0.00 0.00 0.00 2.40
220 221 2.376109 TCCACCTAGACCACGAAGATC 58.624 52.381 0.00 0.00 0.00 2.75
221 222 1.065701 CCACCTAGACCACGAAGATCG 59.934 57.143 0.00 0.00 46.93 3.69
237 238 6.729187 CGAAGATCGTATCATCTATATGCCA 58.271 40.000 0.00 0.00 34.72 4.92
238 239 6.855403 CGAAGATCGTATCATCTATATGCCAG 59.145 42.308 0.00 0.00 34.72 4.85
239 240 7.254932 CGAAGATCGTATCATCTATATGCCAGA 60.255 40.741 0.00 0.00 34.72 3.86
240 241 7.888250 AGATCGTATCATCTATATGCCAGAA 57.112 36.000 0.00 0.00 30.84 3.02
241 242 8.298729 AGATCGTATCATCTATATGCCAGAAA 57.701 34.615 0.00 0.00 30.84 2.52
242 243 8.194104 AGATCGTATCATCTATATGCCAGAAAC 58.806 37.037 0.00 0.00 30.84 2.78
243 244 6.631016 TCGTATCATCTATATGCCAGAAACC 58.369 40.000 0.00 0.00 32.76 3.27
244 245 5.812642 CGTATCATCTATATGCCAGAAACCC 59.187 44.000 0.00 0.00 32.76 4.11
245 246 4.271696 TCATCTATATGCCAGAAACCCG 57.728 45.455 0.00 0.00 32.76 5.28
246 247 3.007940 TCATCTATATGCCAGAAACCCGG 59.992 47.826 0.00 0.00 32.76 5.73
267 268 2.914289 GGCCAGATGGACAGGAGG 59.086 66.667 2.18 0.00 44.76 4.30
268 269 1.997874 GGCCAGATGGACAGGAGGT 60.998 63.158 2.18 0.00 44.76 3.85
269 270 0.691078 GGCCAGATGGACAGGAGGTA 60.691 60.000 2.18 0.00 44.76 3.08
270 271 0.755686 GCCAGATGGACAGGAGGTAG 59.244 60.000 2.18 0.00 37.39 3.18
271 272 1.967274 GCCAGATGGACAGGAGGTAGT 60.967 57.143 2.18 0.00 37.39 2.73
272 273 1.759445 CCAGATGGACAGGAGGTAGTG 59.241 57.143 0.00 0.00 37.39 2.74
273 274 1.759445 CAGATGGACAGGAGGTAGTGG 59.241 57.143 0.00 0.00 0.00 4.00
274 275 0.466124 GATGGACAGGAGGTAGTGGC 59.534 60.000 0.00 0.00 0.00 5.01
275 276 0.252696 ATGGACAGGAGGTAGTGGCA 60.253 55.000 0.00 0.00 0.00 4.92
276 277 0.904865 TGGACAGGAGGTAGTGGCAG 60.905 60.000 0.00 0.00 0.00 4.85
277 278 0.614979 GGACAGGAGGTAGTGGCAGA 60.615 60.000 0.00 0.00 0.00 4.26
278 279 0.820871 GACAGGAGGTAGTGGCAGAG 59.179 60.000 0.00 0.00 0.00 3.35
279 280 0.409876 ACAGGAGGTAGTGGCAGAGA 59.590 55.000 0.00 0.00 0.00 3.10
280 281 1.203187 ACAGGAGGTAGTGGCAGAGAA 60.203 52.381 0.00 0.00 0.00 2.87
281 282 1.902508 CAGGAGGTAGTGGCAGAGAAA 59.097 52.381 0.00 0.00 0.00 2.52
282 283 2.303022 CAGGAGGTAGTGGCAGAGAAAA 59.697 50.000 0.00 0.00 0.00 2.29
283 284 3.054802 CAGGAGGTAGTGGCAGAGAAAAT 60.055 47.826 0.00 0.00 0.00 1.82
284 285 3.054802 AGGAGGTAGTGGCAGAGAAAATG 60.055 47.826 0.00 0.00 0.00 2.32
285 286 3.274288 GAGGTAGTGGCAGAGAAAATGG 58.726 50.000 0.00 0.00 0.00 3.16
286 287 2.025887 AGGTAGTGGCAGAGAAAATGGG 60.026 50.000 0.00 0.00 0.00 4.00
287 288 2.026262 GGTAGTGGCAGAGAAAATGGGA 60.026 50.000 0.00 0.00 0.00 4.37
288 289 2.978156 AGTGGCAGAGAAAATGGGAA 57.022 45.000 0.00 0.00 0.00 3.97
289 290 3.243359 AGTGGCAGAGAAAATGGGAAA 57.757 42.857 0.00 0.00 0.00 3.13
290 291 3.160269 AGTGGCAGAGAAAATGGGAAAG 58.840 45.455 0.00 0.00 0.00 2.62
291 292 3.157087 GTGGCAGAGAAAATGGGAAAGA 58.843 45.455 0.00 0.00 0.00 2.52
292 293 3.573967 GTGGCAGAGAAAATGGGAAAGAA 59.426 43.478 0.00 0.00 0.00 2.52
293 294 4.221482 GTGGCAGAGAAAATGGGAAAGAAT 59.779 41.667 0.00 0.00 0.00 2.40
294 295 4.221262 TGGCAGAGAAAATGGGAAAGAATG 59.779 41.667 0.00 0.00 0.00 2.67
295 296 4.382362 GGCAGAGAAAATGGGAAAGAATGG 60.382 45.833 0.00 0.00 0.00 3.16
296 297 4.463891 GCAGAGAAAATGGGAAAGAATGGA 59.536 41.667 0.00 0.00 0.00 3.41
297 298 5.128335 GCAGAGAAAATGGGAAAGAATGGAT 59.872 40.000 0.00 0.00 0.00 3.41
298 299 6.570692 CAGAGAAAATGGGAAAGAATGGATG 58.429 40.000 0.00 0.00 0.00 3.51
299 300 5.659971 AGAGAAAATGGGAAAGAATGGATGG 59.340 40.000 0.00 0.00 0.00 3.51
300 301 5.592795 AGAAAATGGGAAAGAATGGATGGA 58.407 37.500 0.00 0.00 0.00 3.41
301 302 6.024893 AGAAAATGGGAAAGAATGGATGGAA 58.975 36.000 0.00 0.00 0.00 3.53
302 303 5.682234 AAATGGGAAAGAATGGATGGAAC 57.318 39.130 0.00 0.00 0.00 3.62
303 304 4.614967 ATGGGAAAGAATGGATGGAACT 57.385 40.909 0.00 0.00 0.00 3.01
304 305 3.968265 TGGGAAAGAATGGATGGAACTC 58.032 45.455 0.00 0.00 0.00 3.01
305 306 3.291584 GGGAAAGAATGGATGGAACTCC 58.708 50.000 0.00 0.00 35.74 3.85
306 307 3.291584 GGAAAGAATGGATGGAACTCCC 58.708 50.000 0.00 0.00 34.12 4.30
307 308 2.717639 AAGAATGGATGGAACTCCCG 57.282 50.000 0.00 0.00 37.93 5.14
308 309 1.584724 AGAATGGATGGAACTCCCGT 58.415 50.000 0.00 0.00 37.93 5.28
309 310 1.916181 AGAATGGATGGAACTCCCGTT 59.084 47.619 0.00 0.00 37.93 4.44
310 311 2.308866 AGAATGGATGGAACTCCCGTTT 59.691 45.455 0.00 0.00 37.93 3.60
311 312 3.521937 AGAATGGATGGAACTCCCGTTTA 59.478 43.478 0.00 0.00 37.93 2.01
312 313 2.773993 TGGATGGAACTCCCGTTTAC 57.226 50.000 0.00 0.00 37.93 2.01
313 314 2.262637 TGGATGGAACTCCCGTTTACT 58.737 47.619 0.00 0.00 37.93 2.24
314 315 2.640826 TGGATGGAACTCCCGTTTACTT 59.359 45.455 0.00 0.00 37.93 2.24
315 316 3.073356 TGGATGGAACTCCCGTTTACTTT 59.927 43.478 0.00 0.00 37.93 2.66
316 317 4.077108 GGATGGAACTCCCGTTTACTTTT 58.923 43.478 0.00 0.00 37.93 2.27
317 318 4.521639 GGATGGAACTCCCGTTTACTTTTT 59.478 41.667 0.00 0.00 37.93 1.94
318 319 5.335426 GGATGGAACTCCCGTTTACTTTTTC 60.335 44.000 0.00 0.00 37.93 2.29
319 320 3.560896 TGGAACTCCCGTTTACTTTTTCG 59.439 43.478 0.00 0.00 37.93 3.46
320 321 3.809279 GGAACTCCCGTTTACTTTTTCGA 59.191 43.478 0.00 0.00 32.39 3.71
321 322 4.273235 GGAACTCCCGTTTACTTTTTCGAA 59.727 41.667 0.00 0.00 32.39 3.71
322 323 5.220835 GGAACTCCCGTTTACTTTTTCGAAA 60.221 40.000 6.47 6.47 32.39 3.46
323 324 5.160699 ACTCCCGTTTACTTTTTCGAAAC 57.839 39.130 10.79 0.00 0.00 2.78
324 325 4.877823 ACTCCCGTTTACTTTTTCGAAACT 59.122 37.500 10.79 0.00 32.13 2.66
325 326 5.355071 ACTCCCGTTTACTTTTTCGAAACTT 59.645 36.000 10.79 0.11 32.13 2.66
326 327 5.571277 TCCCGTTTACTTTTTCGAAACTTG 58.429 37.500 10.79 6.28 32.13 3.16
327 328 5.123661 TCCCGTTTACTTTTTCGAAACTTGT 59.876 36.000 10.79 11.71 32.13 3.16
328 329 5.228427 CCCGTTTACTTTTTCGAAACTTGTG 59.772 40.000 10.79 2.04 32.13 3.33
329 330 5.228427 CCGTTTACTTTTTCGAAACTTGTGG 59.772 40.000 10.79 1.97 32.13 4.17
330 331 5.796437 CGTTTACTTTTTCGAAACTTGTGGT 59.204 36.000 10.79 6.05 32.13 4.16
331 332 6.306117 CGTTTACTTTTTCGAAACTTGTGGTT 59.694 34.615 10.79 0.00 40.28 3.67
332 333 7.441864 GTTTACTTTTTCGAAACTTGTGGTTG 58.558 34.615 10.79 0.00 38.29 3.77
333 334 5.128992 ACTTTTTCGAAACTTGTGGTTGT 57.871 34.783 10.79 0.00 38.29 3.32
334 335 5.534407 ACTTTTTCGAAACTTGTGGTTGTT 58.466 33.333 10.79 0.00 38.29 2.83
335 336 5.404066 ACTTTTTCGAAACTTGTGGTTGTTG 59.596 36.000 10.79 0.00 38.29 3.33
336 337 4.768130 TTTCGAAACTTGTGGTTGTTGA 57.232 36.364 6.47 0.00 38.29 3.18
337 338 3.750639 TCGAAACTTGTGGTTGTTGAC 57.249 42.857 0.00 0.00 38.29 3.18
338 339 3.075148 TCGAAACTTGTGGTTGTTGACA 58.925 40.909 0.00 0.00 38.29 3.58
339 340 3.126171 TCGAAACTTGTGGTTGTTGACAG 59.874 43.478 0.00 0.00 38.29 3.51
340 341 2.939460 AACTTGTGGTTGTTGACAGC 57.061 45.000 0.00 0.00 36.70 4.40
341 342 1.102978 ACTTGTGGTTGTTGACAGCC 58.897 50.000 9.75 9.75 45.98 4.85
347 348 1.680338 GGTTGTTGACAGCCAGAACT 58.320 50.000 11.54 0.00 45.24 3.01
348 349 1.604278 GGTTGTTGACAGCCAGAACTC 59.396 52.381 11.54 0.00 45.24 3.01
349 350 2.288666 GTTGTTGACAGCCAGAACTCA 58.711 47.619 0.00 0.00 0.00 3.41
350 351 2.245159 TGTTGACAGCCAGAACTCAG 57.755 50.000 0.00 0.00 0.00 3.35
351 352 1.762370 TGTTGACAGCCAGAACTCAGA 59.238 47.619 0.00 0.00 0.00 3.27
352 353 2.170397 TGTTGACAGCCAGAACTCAGAA 59.830 45.455 0.00 0.00 0.00 3.02
353 354 3.206150 GTTGACAGCCAGAACTCAGAAA 58.794 45.455 0.00 0.00 0.00 2.52
354 355 2.838736 TGACAGCCAGAACTCAGAAAC 58.161 47.619 0.00 0.00 0.00 2.78
355 356 2.147150 GACAGCCAGAACTCAGAAACC 58.853 52.381 0.00 0.00 0.00 3.27
356 357 1.151668 CAGCCAGAACTCAGAAACCG 58.848 55.000 0.00 0.00 0.00 4.44
357 358 0.035458 AGCCAGAACTCAGAAACCGG 59.965 55.000 0.00 0.00 0.00 5.28
358 359 0.034896 GCCAGAACTCAGAAACCGGA 59.965 55.000 9.46 0.00 0.00 5.14
359 360 1.339151 GCCAGAACTCAGAAACCGGAT 60.339 52.381 9.46 0.00 0.00 4.18
360 361 2.622436 CCAGAACTCAGAAACCGGATC 58.378 52.381 9.46 6.12 0.00 3.36
361 362 2.234908 CCAGAACTCAGAAACCGGATCT 59.765 50.000 9.46 8.81 0.00 2.75
362 363 3.447586 CCAGAACTCAGAAACCGGATCTA 59.552 47.826 9.46 0.36 0.00 1.98
363 364 4.100189 CCAGAACTCAGAAACCGGATCTAT 59.900 45.833 9.46 0.00 0.00 1.98
364 365 5.046529 CAGAACTCAGAAACCGGATCTATG 58.953 45.833 9.46 9.72 0.00 2.23
365 366 3.460857 ACTCAGAAACCGGATCTATGC 57.539 47.619 9.46 0.00 0.00 3.14
366 367 2.766263 ACTCAGAAACCGGATCTATGCA 59.234 45.455 9.46 0.00 0.00 3.96
367 368 3.197766 ACTCAGAAACCGGATCTATGCAA 59.802 43.478 9.46 0.00 0.00 4.08
368 369 4.191544 CTCAGAAACCGGATCTATGCAAA 58.808 43.478 9.46 0.00 0.00 3.68
369 370 4.780815 TCAGAAACCGGATCTATGCAAAT 58.219 39.130 9.46 0.00 0.00 2.32
370 371 5.192927 TCAGAAACCGGATCTATGCAAATT 58.807 37.500 9.46 0.00 0.00 1.82
371 372 6.353323 TCAGAAACCGGATCTATGCAAATTA 58.647 36.000 9.46 0.00 0.00 1.40
372 373 6.483307 TCAGAAACCGGATCTATGCAAATTAG 59.517 38.462 9.46 0.00 0.00 1.73
373 374 5.239525 AGAAACCGGATCTATGCAAATTAGC 59.760 40.000 9.46 0.00 0.00 3.09
374 375 4.357918 ACCGGATCTATGCAAATTAGCT 57.642 40.909 9.46 0.00 34.99 3.32
375 376 4.319177 ACCGGATCTATGCAAATTAGCTC 58.681 43.478 9.46 0.00 34.99 4.09
376 377 4.040952 ACCGGATCTATGCAAATTAGCTCT 59.959 41.667 9.46 0.00 34.99 4.09
377 378 4.629200 CCGGATCTATGCAAATTAGCTCTC 59.371 45.833 0.00 0.00 34.99 3.20
378 379 5.233225 CGGATCTATGCAAATTAGCTCTCA 58.767 41.667 0.00 0.00 34.99 3.27
379 380 5.698089 CGGATCTATGCAAATTAGCTCTCAA 59.302 40.000 0.00 0.00 34.99 3.02
380 381 6.128607 CGGATCTATGCAAATTAGCTCTCAAG 60.129 42.308 0.00 0.00 34.99 3.02
381 382 6.933521 GGATCTATGCAAATTAGCTCTCAAGA 59.066 38.462 0.00 0.00 34.99 3.02
382 383 7.118101 GGATCTATGCAAATTAGCTCTCAAGAG 59.882 40.741 2.53 2.53 44.75 2.85
403 404 4.348198 GCAAATGCTCCTAGAGTGAAAC 57.652 45.455 0.00 0.00 38.21 2.78
404 405 3.181516 GCAAATGCTCCTAGAGTGAAACG 60.182 47.826 0.00 0.00 39.30 3.60
405 406 4.245660 CAAATGCTCCTAGAGTGAAACGA 58.754 43.478 0.00 0.00 45.86 3.85
406 407 4.537135 AATGCTCCTAGAGTGAAACGAA 57.463 40.909 0.00 0.00 45.86 3.85
407 408 4.744795 ATGCTCCTAGAGTGAAACGAAT 57.255 40.909 0.00 0.00 45.86 3.34
408 409 3.849911 TGCTCCTAGAGTGAAACGAATG 58.150 45.455 0.00 0.00 45.86 2.67
409 410 3.509967 TGCTCCTAGAGTGAAACGAATGA 59.490 43.478 0.00 0.00 45.86 2.57
410 411 4.160439 TGCTCCTAGAGTGAAACGAATGAT 59.840 41.667 0.00 0.00 45.86 2.45
411 412 4.505922 GCTCCTAGAGTGAAACGAATGATG 59.494 45.833 0.00 0.00 45.86 3.07
412 413 5.655488 CTCCTAGAGTGAAACGAATGATGT 58.345 41.667 0.00 0.00 45.86 3.06
413 414 6.680625 GCTCCTAGAGTGAAACGAATGATGTA 60.681 42.308 0.00 0.00 45.86 2.29
414 415 7.348080 TCCTAGAGTGAAACGAATGATGTAT 57.652 36.000 0.00 0.00 45.86 2.29
415 416 7.782049 TCCTAGAGTGAAACGAATGATGTATT 58.218 34.615 0.00 0.00 45.86 1.89
416 417 7.706607 TCCTAGAGTGAAACGAATGATGTATTG 59.293 37.037 0.00 0.00 45.86 1.90
417 418 7.706607 CCTAGAGTGAAACGAATGATGTATTGA 59.293 37.037 0.00 0.00 45.86 2.57
418 419 9.254133 CTAGAGTGAAACGAATGATGTATTGAT 57.746 33.333 0.00 0.00 45.86 2.57
419 420 7.913423 AGAGTGAAACGAATGATGTATTGATG 58.087 34.615 0.00 0.00 45.86 3.07
420 421 7.550551 AGAGTGAAACGAATGATGTATTGATGT 59.449 33.333 0.00 0.00 45.86 3.06
421 422 7.688372 AGTGAAACGAATGATGTATTGATGTC 58.312 34.615 0.00 0.00 45.86 3.06
422 423 7.334171 AGTGAAACGAATGATGTATTGATGTCA 59.666 33.333 0.00 0.00 45.86 3.58
423 424 7.962373 GTGAAACGAATGATGTATTGATGTCAA 59.038 33.333 0.00 0.00 40.51 3.18
424 425 8.510505 TGAAACGAATGATGTATTGATGTCAAA 58.489 29.630 0.00 0.00 39.55 2.69
425 426 9.340695 GAAACGAATGATGTATTGATGTCAAAA 57.659 29.630 0.00 0.00 39.55 2.44
426 427 8.900511 AACGAATGATGTATTGATGTCAAAAG 57.099 30.769 0.00 0.00 39.55 2.27
427 428 8.267620 ACGAATGATGTATTGATGTCAAAAGA 57.732 30.769 0.00 0.00 39.55 2.52
428 429 8.729756 ACGAATGATGTATTGATGTCAAAAGAA 58.270 29.630 0.00 0.00 39.55 2.52
429 430 9.726232 CGAATGATGTATTGATGTCAAAAGAAT 57.274 29.630 0.00 0.00 39.55 2.40
433 434 8.611757 TGATGTATTGATGTCAAAAGAATACCG 58.388 33.333 0.00 0.00 39.55 4.02
434 435 7.315247 TGTATTGATGTCAAAAGAATACCGG 57.685 36.000 0.00 0.00 39.55 5.28
435 436 5.835113 ATTGATGTCAAAAGAATACCGGG 57.165 39.130 6.32 0.00 39.55 5.73
436 437 4.561500 TGATGTCAAAAGAATACCGGGA 57.438 40.909 6.32 0.00 0.00 5.14
437 438 4.912586 TGATGTCAAAAGAATACCGGGAA 58.087 39.130 6.32 0.00 0.00 3.97
438 439 4.941263 TGATGTCAAAAGAATACCGGGAAG 59.059 41.667 6.32 0.00 0.00 3.46
439 440 4.627284 TGTCAAAAGAATACCGGGAAGA 57.373 40.909 6.32 0.00 0.00 2.87
440 441 4.975631 TGTCAAAAGAATACCGGGAAGAA 58.024 39.130 6.32 0.00 0.00 2.52
441 442 5.378332 TGTCAAAAGAATACCGGGAAGAAA 58.622 37.500 6.32 0.00 0.00 2.52
442 443 5.828859 TGTCAAAAGAATACCGGGAAGAAAA 59.171 36.000 6.32 0.00 0.00 2.29
443 444 6.321690 TGTCAAAAGAATACCGGGAAGAAAAA 59.678 34.615 6.32 0.00 0.00 1.94
468 469 5.670485 AGTACGCATTCACATCTCCATTTA 58.330 37.500 0.00 0.00 0.00 1.40
470 471 5.428496 ACGCATTCACATCTCCATTTATG 57.572 39.130 0.00 0.00 0.00 1.90
478 479 6.355747 TCACATCTCCATTTATGTATGCACA 58.644 36.000 0.00 0.00 39.52 4.57
481 482 6.774170 ACATCTCCATTTATGTATGCACATGT 59.226 34.615 0.00 0.00 45.17 3.21
523 524 4.770010 TGGTGAAATTTTGGATCCACCTAC 59.230 41.667 15.91 6.90 43.15 3.18
524 525 4.770010 GGTGAAATTTTGGATCCACCTACA 59.230 41.667 15.91 7.63 40.48 2.74
536 537 2.894765 TCCACCTACACAACGAAGATGA 59.105 45.455 0.00 0.00 33.32 2.92
537 538 3.513912 TCCACCTACACAACGAAGATGAT 59.486 43.478 0.00 0.00 33.32 2.45
538 539 4.020573 TCCACCTACACAACGAAGATGATT 60.021 41.667 0.00 0.00 33.32 2.57
592 593 6.505272 ACGAGCTATCAAATGAACTAGTACC 58.495 40.000 0.00 0.00 0.00 3.34
604 605 9.588096 AAATGAACTAGTACCTTGGATTTTCTT 57.412 29.630 0.00 0.00 0.00 2.52
607 608 8.215050 TGAACTAGTACCTTGGATTTTCTTTCA 58.785 33.333 0.00 0.00 0.00 2.69
618 619 4.385748 GGATTTTCTTTCAACGGACAATGC 59.614 41.667 0.00 0.00 0.00 3.56
619 620 4.647424 TTTTCTTTCAACGGACAATGCT 57.353 36.364 0.00 0.00 0.00 3.79
631 632 0.541863 ACAATGCTACTCTTCCCCCG 59.458 55.000 0.00 0.00 0.00 5.73
660 661 6.771188 AAGAAACAATGTCACTCTTAGTCG 57.229 37.500 4.24 0.00 0.00 4.18
662 663 6.153067 AGAAACAATGTCACTCTTAGTCGAG 58.847 40.000 0.00 0.00 37.07 4.04
664 665 3.827302 ACAATGTCACTCTTAGTCGAGGT 59.173 43.478 0.00 0.00 35.33 3.85
666 667 4.705337 ATGTCACTCTTAGTCGAGGTTC 57.295 45.455 0.00 0.00 35.33 3.62
667 668 3.483421 TGTCACTCTTAGTCGAGGTTCA 58.517 45.455 0.00 0.00 35.33 3.18
668 669 3.887110 TGTCACTCTTAGTCGAGGTTCAA 59.113 43.478 0.00 0.00 35.33 2.69
671 672 3.675698 CACTCTTAGTCGAGGTTCAAAGC 59.324 47.826 0.00 0.00 35.33 3.51
687 689 4.676546 TCAAAGCTCTACACATCGATGAG 58.323 43.478 31.33 25.19 0.00 2.90
712 714 2.253452 GGCAATCCGCATCGCATC 59.747 61.111 0.00 0.00 45.17 3.91
713 715 2.253452 GCAATCCGCATCGCATCC 59.747 61.111 0.00 0.00 41.79 3.51
730 732 2.192861 CCTTGCTGCCAACGGTCAA 61.193 57.895 0.00 0.00 0.00 3.18
737 739 1.336440 CTGCCAACGGTCAACAATTGA 59.664 47.619 13.59 0.00 37.33 2.57
749 751 7.607991 ACGGTCAACAATTGAGAGATCTTATTT 59.392 33.333 13.59 0.00 41.01 1.40
758 760 4.740205 TGAGAGATCTTATTTTACGCGCAG 59.260 41.667 5.73 2.42 0.00 5.18
771 773 1.292223 GCGCAGTGTACTTCCTCCA 59.708 57.895 0.30 0.00 0.00 3.86
774 776 1.471676 CGCAGTGTACTTCCTCCATCC 60.472 57.143 0.00 0.00 0.00 3.51
775 777 1.834263 GCAGTGTACTTCCTCCATCCT 59.166 52.381 0.00 0.00 0.00 3.24
824 826 8.528044 TTAGTCAAAAATAAAAGAGGGTGTGT 57.472 30.769 0.00 0.00 0.00 3.72
828 830 9.758651 GTCAAAAATAAAAGAGGGTGTGTAAAT 57.241 29.630 0.00 0.00 0.00 1.40
829 831 9.757227 TCAAAAATAAAAGAGGGTGTGTAAATG 57.243 29.630 0.00 0.00 0.00 2.32
831 833 9.758651 AAAAATAAAAGAGGGTGTGTAAATGTC 57.241 29.630 0.00 0.00 0.00 3.06
836 838 1.161843 GGGTGTGTAAATGTCCACGG 58.838 55.000 0.00 0.00 34.28 4.94
837 839 1.270947 GGGTGTGTAAATGTCCACGGA 60.271 52.381 0.00 0.00 34.28 4.69
838 840 2.496111 GGTGTGTAAATGTCCACGGAA 58.504 47.619 0.00 0.00 34.28 4.30
840 842 3.119990 GGTGTGTAAATGTCCACGGAATG 60.120 47.826 0.00 0.00 34.28 2.67
841 843 2.486203 TGTGTAAATGTCCACGGAATGC 59.514 45.455 0.00 0.00 34.28 3.56
900 942 2.265904 GCGCTTCCCCGGAAAAGTT 61.266 57.895 0.73 0.00 33.34 2.66
902 944 0.887387 CGCTTCCCCGGAAAAGTTCA 60.887 55.000 0.73 0.00 33.34 3.18
904 946 1.534729 CTTCCCCGGAAAAGTTCAGG 58.465 55.000 0.73 0.68 43.56 3.86
977 1026 1.594518 CGTCGTTTTTGCTGTGACTGG 60.595 52.381 0.00 0.00 0.00 4.00
1216 1268 3.805307 CTCGTCTCGCCGCTGACT 61.805 66.667 10.32 0.00 0.00 3.41
1218 1270 4.103103 CGTCTCGCCGCTGACTGA 62.103 66.667 10.32 0.00 0.00 3.41
1219 1271 2.202544 GTCTCGCCGCTGACTGAG 60.203 66.667 6.25 0.00 0.00 3.35
1288 1355 4.440127 CCCGCCTGCACAATTGGC 62.440 66.667 10.83 10.82 42.94 4.52
1409 1476 7.498900 GGAGAATTGGGAAAGAACAAATGTTTT 59.501 33.333 0.00 0.00 38.56 2.43
1462 1530 3.450817 GGTTCCCCTGGTTAATTTGGATG 59.549 47.826 0.00 0.00 0.00 3.51
1559 1633 4.034048 CACACTTGAACTATTCCGGCATAC 59.966 45.833 0.00 0.00 0.00 2.39
1573 1647 0.178981 GCATACATCCATGGTGCCCT 60.179 55.000 12.58 0.00 37.48 5.19
1577 1651 1.210204 ACATCCATGGTGCCCTCTGT 61.210 55.000 12.58 2.86 0.00 3.41
1579 1653 1.210204 ATCCATGGTGCCCTCTGTGT 61.210 55.000 12.58 0.00 0.00 3.72
1582 1656 0.538057 CATGGTGCCCTCTGTGTTGT 60.538 55.000 0.00 0.00 0.00 3.32
1583 1657 0.538057 ATGGTGCCCTCTGTGTTGTG 60.538 55.000 0.00 0.00 0.00 3.33
1584 1658 2.555547 GGTGCCCTCTGTGTTGTGC 61.556 63.158 0.00 0.00 0.00 4.57
1586 1660 1.526686 TGCCCTCTGTGTTGTGCAG 60.527 57.895 0.00 0.00 35.43 4.41
1587 1661 1.227943 GCCCTCTGTGTTGTGCAGA 60.228 57.895 0.00 0.00 40.28 4.26
1588 1662 1.510480 GCCCTCTGTGTTGTGCAGAC 61.510 60.000 0.00 0.00 37.98 3.51
1589 1663 0.179048 CCCTCTGTGTTGTGCAGACA 60.179 55.000 0.00 0.00 37.98 3.41
1602 1700 4.829064 GTGCAGACACAGTTTTATTGGA 57.171 40.909 0.00 0.00 46.61 3.53
1608 1706 6.017109 GCAGACACAGTTTTATTGGAAGAGAA 60.017 38.462 0.00 0.00 0.00 2.87
1670 1768 1.134670 GGTTACAGGAGCTCGCTGAAT 60.135 52.381 28.29 15.56 0.00 2.57
1815 1913 2.939103 AGCGATAAGGAAGACAACATGC 59.061 45.455 0.00 0.00 0.00 4.06
1922 2020 0.841289 TCCACCGGAACAGGAACTTT 59.159 50.000 9.46 0.00 34.60 2.66
1952 2050 3.420893 TCGCAATCAAAATTCCCTCACT 58.579 40.909 0.00 0.00 0.00 3.41
2033 2131 2.158652 TGGGTGTAAAAACGGGATCACA 60.159 45.455 0.00 0.00 0.00 3.58
2053 2151 3.525199 ACAGAGGAAGAAAGGGTATGCAT 59.475 43.478 3.79 3.79 0.00 3.96
2069 2167 7.124298 AGGGTATGCATCTATCGCTTTAATCTA 59.876 37.037 0.19 0.00 0.00 1.98
2081 2179 7.502177 TCGCTTTAATCTACTTGTAACTTCG 57.498 36.000 0.00 0.00 0.00 3.79
2088 2186 9.642327 TTAATCTACTTGTAACTTCGCATGTTA 57.358 29.630 0.00 0.00 0.00 2.41
2266 2366 3.823304 AGAAGACAACCTCCAATTCAAGC 59.177 43.478 0.00 0.00 0.00 4.01
2317 2417 0.320334 TTCGGCTTGACGATGAAGCA 60.320 50.000 15.92 0.00 46.43 3.91
2320 2420 1.661341 GGCTTGACGATGAAGCAGAT 58.339 50.000 15.92 0.00 46.43 2.90
2359 2459 2.722201 GGACTTGGGCTCGGACGAT 61.722 63.158 0.00 0.00 0.00 3.73
2437 2540 0.898320 CTCTCGACCACAAGTCCCAT 59.102 55.000 0.00 0.00 43.08 4.00
2457 2560 0.687354 CTTCAGGTATCCCATCCCCG 59.313 60.000 0.00 0.00 0.00 5.73
2466 2569 2.687200 CCATCCCCGGTCTCACCA 60.687 66.667 0.00 0.00 38.47 4.17
2645 2749 4.264172 TGGTAGTTTTGCCATTAGGGTGAT 60.264 41.667 0.00 0.00 39.65 3.06
2672 2776 5.957771 TTCTCTTACTGGTTCATATGGCT 57.042 39.130 2.13 0.00 0.00 4.75
2779 2883 4.986659 ACACTATCACACCAAAACTACGTC 59.013 41.667 0.00 0.00 0.00 4.34
2921 3028 4.760204 GCCACAATGGATGGTTATACCTAC 59.240 45.833 0.00 0.00 40.96 3.18
3070 3177 7.856145 AGAGAACAGAAAATTTCAGCGATAT 57.144 32.000 8.55 0.00 0.00 1.63
3146 3253 2.087646 GGGAATGAGCAGACTTGTTCC 58.912 52.381 0.00 0.00 38.25 3.62
3465 3575 4.704540 TGCATTGTTGGAATACCTTACAGG 59.295 41.667 0.00 0.00 42.49 4.00
3546 3656 0.387929 TCCAGACACGTCCAACTCAC 59.612 55.000 0.00 0.00 0.00 3.51
3725 3835 2.445682 ATAAGAGAGTGGCGGAGAGT 57.554 50.000 0.00 0.00 0.00 3.24
3746 3856 3.496507 GTGTGAAAGAGCTCAAGGAAGAC 59.503 47.826 17.77 2.41 0.00 3.01
3788 3898 5.510430 TGTGCACTAGAAGAAGAGAGGATA 58.490 41.667 19.41 0.00 0.00 2.59
3893 4003 5.228945 TGGAAGTAAGGGAAAGAGAGTTG 57.771 43.478 0.00 0.00 0.00 3.16
3988 4098 3.617706 CAGTTCTACATGAGCTTGCAGAG 59.382 47.826 0.00 0.00 33.87 3.35
4056 4166 9.552114 CTTCATTGTCTTGACTTCAATGTTATC 57.448 33.333 13.98 0.00 44.68 1.75
4347 4458 7.578458 ACCCCTTATACAACGGGATAAATAT 57.422 36.000 0.00 0.00 40.55 1.28
4479 4591 0.251916 TCGTCAGGAAATCCGCCAAT 59.748 50.000 0.00 0.00 42.08 3.16
4882 4994 4.503991 CCTGAAGCTGTAAAGAACTGGAGT 60.504 45.833 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.951954 AGTATAAGCGTGTCGAATCTAATAAG 57.048 34.615 0.00 0.00 0.00 1.73
8 9 7.490079 TGTTTGATAAGTATAAGCGTGTCGAAT 59.510 33.333 0.00 0.00 0.00 3.34
9 10 6.807720 TGTTTGATAAGTATAAGCGTGTCGAA 59.192 34.615 0.00 0.00 0.00 3.71
10 11 6.324042 TGTTTGATAAGTATAAGCGTGTCGA 58.676 36.000 0.00 0.00 0.00 4.20
11 12 6.563398 TGTTTGATAAGTATAAGCGTGTCG 57.437 37.500 0.00 0.00 0.00 4.35
12 13 8.600625 TCATTGTTTGATAAGTATAAGCGTGTC 58.399 33.333 0.00 0.00 0.00 3.67
13 14 8.487313 TCATTGTTTGATAAGTATAAGCGTGT 57.513 30.769 0.00 0.00 0.00 4.49
36 37 9.987272 CACAAGTGTAGGAGATTTATCATATCA 57.013 33.333 0.00 0.00 0.00 2.15
37 38 9.429359 CCACAAGTGTAGGAGATTTATCATATC 57.571 37.037 0.00 0.00 0.00 1.63
38 39 8.378565 CCCACAAGTGTAGGAGATTTATCATAT 58.621 37.037 0.00 0.00 0.00 1.78
39 40 7.347222 ACCCACAAGTGTAGGAGATTTATCATA 59.653 37.037 2.74 0.00 31.08 2.15
40 41 6.158695 ACCCACAAGTGTAGGAGATTTATCAT 59.841 38.462 2.74 0.00 31.08 2.45
41 42 5.487488 ACCCACAAGTGTAGGAGATTTATCA 59.513 40.000 2.74 0.00 31.08 2.15
42 43 5.990668 ACCCACAAGTGTAGGAGATTTATC 58.009 41.667 2.74 0.00 31.08 1.75
43 44 6.180472 CAACCCACAAGTGTAGGAGATTTAT 58.820 40.000 2.74 0.00 31.08 1.40
44 45 5.072600 ACAACCCACAAGTGTAGGAGATTTA 59.927 40.000 2.74 0.00 31.08 1.40
45 46 4.141251 ACAACCCACAAGTGTAGGAGATTT 60.141 41.667 2.74 0.00 31.08 2.17
46 47 3.394606 ACAACCCACAAGTGTAGGAGATT 59.605 43.478 2.74 0.00 31.08 2.40
47 48 2.979678 ACAACCCACAAGTGTAGGAGAT 59.020 45.455 2.74 0.00 31.08 2.75
48 49 2.367567 GACAACCCACAAGTGTAGGAGA 59.632 50.000 2.74 0.00 31.08 3.71
49 50 2.104111 TGACAACCCACAAGTGTAGGAG 59.896 50.000 2.74 0.00 31.08 3.69
50 51 2.120312 TGACAACCCACAAGTGTAGGA 58.880 47.619 2.74 0.00 31.08 2.94
51 52 2.158813 AGTGACAACCCACAAGTGTAGG 60.159 50.000 0.00 0.00 39.42 3.18
52 53 3.194005 AGTGACAACCCACAAGTGTAG 57.806 47.619 0.00 0.00 39.42 2.74
53 54 3.493699 GCTAGTGACAACCCACAAGTGTA 60.494 47.826 0.00 0.00 39.42 2.90
54 55 2.745152 GCTAGTGACAACCCACAAGTGT 60.745 50.000 0.00 0.00 39.42 3.55
55 56 1.873591 GCTAGTGACAACCCACAAGTG 59.126 52.381 0.00 0.00 39.42 3.16
56 57 1.202770 GGCTAGTGACAACCCACAAGT 60.203 52.381 0.00 0.00 39.42 3.16
57 58 1.202758 TGGCTAGTGACAACCCACAAG 60.203 52.381 0.00 0.00 39.42 3.16
58 59 0.840617 TGGCTAGTGACAACCCACAA 59.159 50.000 0.00 0.00 39.42 3.33
59 60 0.840617 TTGGCTAGTGACAACCCACA 59.159 50.000 0.00 0.00 36.05 4.17
60 61 1.975660 TTTGGCTAGTGACAACCCAC 58.024 50.000 0.00 0.00 41.58 4.61
61 62 2.969821 ATTTGGCTAGTGACAACCCA 57.030 45.000 0.00 0.00 41.58 4.51
62 63 7.582667 AAATATATTTGGCTAGTGACAACCC 57.417 36.000 9.93 0.00 41.58 4.11
63 64 9.301153 CAAAAATATATTTGGCTAGTGACAACC 57.699 33.333 11.42 0.00 41.58 3.77
64 65 9.855021 ACAAAAATATATTTGGCTAGTGACAAC 57.145 29.630 11.42 0.00 41.58 3.32
65 66 9.853555 CACAAAAATATATTTGGCTAGTGACAA 57.146 29.630 11.42 0.00 43.10 3.18
66 67 8.465999 CCACAAAAATATATTTGGCTAGTGACA 58.534 33.333 11.42 0.00 43.10 3.58
67 68 7.435192 GCCACAAAAATATATTTGGCTAGTGAC 59.565 37.037 23.15 12.25 43.10 3.67
68 69 7.488322 GCCACAAAAATATATTTGGCTAGTGA 58.512 34.615 23.15 0.00 43.10 3.41
69 70 6.417635 CGCCACAAAAATATATTTGGCTAGTG 59.582 38.462 25.64 19.99 43.10 2.74
70 71 6.320164 TCGCCACAAAAATATATTTGGCTAGT 59.680 34.615 25.64 12.98 43.10 2.57
71 72 6.734137 TCGCCACAAAAATATATTTGGCTAG 58.266 36.000 25.64 16.54 43.10 3.42
72 73 6.701145 TCGCCACAAAAATATATTTGGCTA 57.299 33.333 25.64 17.68 43.10 3.93
73 74 5.590530 TCGCCACAAAAATATATTTGGCT 57.409 34.783 25.64 6.28 43.10 4.75
74 75 5.234116 CCTTCGCCACAAAAATATATTTGGC 59.766 40.000 21.55 21.55 43.10 4.52
75 76 5.234116 GCCTTCGCCACAAAAATATATTTGG 59.766 40.000 11.42 9.99 43.10 3.28
76 77 6.272698 GCCTTCGCCACAAAAATATATTTG 57.727 37.500 11.42 4.53 44.11 2.32
92 93 0.668535 GGGTTTGATATGGCCTTCGC 59.331 55.000 3.32 0.00 0.00 4.70
93 94 2.348411 AGGGTTTGATATGGCCTTCG 57.652 50.000 3.32 0.00 0.00 3.79
94 95 3.138468 AGGTAGGGTTTGATATGGCCTTC 59.862 47.826 3.32 0.00 0.00 3.46
95 96 3.131252 AGGTAGGGTTTGATATGGCCTT 58.869 45.455 3.32 0.00 0.00 4.35
96 97 2.789219 AGGTAGGGTTTGATATGGCCT 58.211 47.619 3.32 0.00 0.00 5.19
97 98 3.595190 AAGGTAGGGTTTGATATGGCC 57.405 47.619 0.00 0.00 0.00 5.36
98 99 3.636764 CCAAAGGTAGGGTTTGATATGGC 59.363 47.826 0.00 0.00 37.10 4.40
99 100 5.124036 TCCAAAGGTAGGGTTTGATATGG 57.876 43.478 0.00 0.00 37.10 2.74
100 101 6.431234 GCTATCCAAAGGTAGGGTTTGATATG 59.569 42.308 0.00 0.00 37.10 1.78
101 102 6.102615 TGCTATCCAAAGGTAGGGTTTGATAT 59.897 38.462 0.00 0.00 37.10 1.63
102 103 5.430417 TGCTATCCAAAGGTAGGGTTTGATA 59.570 40.000 0.00 0.00 37.10 2.15
103 104 4.229582 TGCTATCCAAAGGTAGGGTTTGAT 59.770 41.667 0.00 0.00 37.10 2.57
104 105 3.589735 TGCTATCCAAAGGTAGGGTTTGA 59.410 43.478 0.00 0.00 37.10 2.69
105 106 3.963129 TGCTATCCAAAGGTAGGGTTTG 58.037 45.455 0.00 0.00 35.11 2.93
106 107 4.668138 TTGCTATCCAAAGGTAGGGTTT 57.332 40.909 0.00 0.00 0.00 3.27
107 108 4.668138 TTTGCTATCCAAAGGTAGGGTT 57.332 40.909 0.00 0.00 38.46 4.11
116 117 2.562298 CCCTTGTGCTTTGCTATCCAAA 59.438 45.455 0.00 0.00 40.97 3.28
117 118 2.170166 CCCTTGTGCTTTGCTATCCAA 58.830 47.619 0.00 0.00 0.00 3.53
118 119 1.075374 ACCCTTGTGCTTTGCTATCCA 59.925 47.619 0.00 0.00 0.00 3.41
119 120 1.839424 ACCCTTGTGCTTTGCTATCC 58.161 50.000 0.00 0.00 0.00 2.59
120 121 3.255642 TGAAACCCTTGTGCTTTGCTATC 59.744 43.478 0.00 0.00 0.00 2.08
121 122 3.230134 TGAAACCCTTGTGCTTTGCTAT 58.770 40.909 0.00 0.00 0.00 2.97
122 123 2.660572 TGAAACCCTTGTGCTTTGCTA 58.339 42.857 0.00 0.00 0.00 3.49
123 124 1.484038 TGAAACCCTTGTGCTTTGCT 58.516 45.000 0.00 0.00 0.00 3.91
124 125 2.531522 ATGAAACCCTTGTGCTTTGC 57.468 45.000 0.00 0.00 0.00 3.68
125 126 6.705381 TCAATTAATGAAACCCTTGTGCTTTG 59.295 34.615 0.00 0.00 34.30 2.77
126 127 6.825610 TCAATTAATGAAACCCTTGTGCTTT 58.174 32.000 0.00 0.00 34.30 3.51
127 128 6.418057 TCAATTAATGAAACCCTTGTGCTT 57.582 33.333 0.00 0.00 34.30 3.91
128 129 6.400568 CATCAATTAATGAAACCCTTGTGCT 58.599 36.000 0.00 0.00 42.54 4.40
129 130 5.581874 CCATCAATTAATGAAACCCTTGTGC 59.418 40.000 0.00 0.00 42.54 4.57
130 131 6.934056 TCCATCAATTAATGAAACCCTTGTG 58.066 36.000 0.00 0.00 42.54 3.33
131 132 6.351286 GCTCCATCAATTAATGAAACCCTTGT 60.351 38.462 0.00 0.00 42.54 3.16
132 133 6.044682 GCTCCATCAATTAATGAAACCCTTG 58.955 40.000 0.00 0.00 42.54 3.61
133 134 5.721000 TGCTCCATCAATTAATGAAACCCTT 59.279 36.000 0.00 0.00 42.54 3.95
134 135 5.271598 TGCTCCATCAATTAATGAAACCCT 58.728 37.500 0.00 0.00 42.54 4.34
135 136 5.596836 TGCTCCATCAATTAATGAAACCC 57.403 39.130 0.00 0.00 42.54 4.11
136 137 6.018507 GCAATGCTCCATCAATTAATGAAACC 60.019 38.462 0.00 0.00 42.54 3.27
137 138 6.759827 AGCAATGCTCCATCAATTAATGAAAC 59.240 34.615 0.00 0.00 36.27 2.78
138 139 6.880484 AGCAATGCTCCATCAATTAATGAAA 58.120 32.000 0.00 0.00 36.27 2.69
139 140 6.474140 AGCAATGCTCCATCAATTAATGAA 57.526 33.333 0.00 0.00 36.27 2.57
140 141 7.770366 ATAGCAATGCTCCATCAATTAATGA 57.230 32.000 12.53 0.00 40.44 2.57
141 142 8.737175 ACTATAGCAATGCTCCATCAATTAATG 58.263 33.333 12.53 0.00 40.44 1.90
142 143 8.874744 ACTATAGCAATGCTCCATCAATTAAT 57.125 30.769 12.53 0.00 40.44 1.40
143 144 7.938490 TGACTATAGCAATGCTCCATCAATTAA 59.062 33.333 12.53 0.00 40.44 1.40
144 145 7.452562 TGACTATAGCAATGCTCCATCAATTA 58.547 34.615 12.53 0.00 40.44 1.40
145 146 6.301486 TGACTATAGCAATGCTCCATCAATT 58.699 36.000 12.53 0.00 40.44 2.32
146 147 5.872963 TGACTATAGCAATGCTCCATCAAT 58.127 37.500 12.53 0.40 40.44 2.57
147 148 5.294734 TGACTATAGCAATGCTCCATCAA 57.705 39.130 12.53 0.00 40.44 2.57
148 149 4.961438 TGACTATAGCAATGCTCCATCA 57.039 40.909 12.53 9.08 40.44 3.07
149 150 6.814506 ATTTGACTATAGCAATGCTCCATC 57.185 37.500 12.53 6.39 40.44 3.51
150 151 8.571336 GTTTATTTGACTATAGCAATGCTCCAT 58.429 33.333 12.53 2.94 40.44 3.41
151 152 7.254761 CGTTTATTTGACTATAGCAATGCTCCA 60.255 37.037 12.53 0.00 40.44 3.86
152 153 7.072030 CGTTTATTTGACTATAGCAATGCTCC 58.928 38.462 12.53 0.00 40.44 4.70
153 154 7.630924 ACGTTTATTTGACTATAGCAATGCTC 58.369 34.615 12.53 0.00 40.44 4.26
154 155 7.553881 ACGTTTATTTGACTATAGCAATGCT 57.446 32.000 13.92 13.92 43.41 3.79
155 156 8.548721 AGTACGTTTATTTGACTATAGCAATGC 58.451 33.333 0.00 0.00 0.00 3.56
158 159 9.090692 GGAAGTACGTTTATTTGACTATAGCAA 57.909 33.333 0.00 2.72 0.00 3.91
159 160 8.252417 TGGAAGTACGTTTATTTGACTATAGCA 58.748 33.333 0.00 0.00 0.00 3.49
160 161 8.538039 GTGGAAGTACGTTTATTTGACTATAGC 58.462 37.037 0.00 0.00 0.00 2.97
161 162 9.577110 TGTGGAAGTACGTTTATTTGACTATAG 57.423 33.333 0.00 0.00 0.00 1.31
163 164 9.444600 AATGTGGAAGTACGTTTATTTGACTAT 57.555 29.630 0.00 0.00 0.00 2.12
164 165 8.836268 AATGTGGAAGTACGTTTATTTGACTA 57.164 30.769 0.00 0.00 0.00 2.59
165 166 7.739498 AATGTGGAAGTACGTTTATTTGACT 57.261 32.000 0.00 0.00 0.00 3.41
166 167 9.881529 TTTAATGTGGAAGTACGTTTATTTGAC 57.118 29.630 0.00 0.00 32.42 3.18
173 174 9.233649 TCCAATATTTAATGTGGAAGTACGTTT 57.766 29.630 8.99 0.00 37.22 3.60
174 175 8.795842 TCCAATATTTAATGTGGAAGTACGTT 57.204 30.769 8.99 0.00 37.22 3.99
175 176 8.974060 ATCCAATATTTAATGTGGAAGTACGT 57.026 30.769 13.65 0.00 43.21 3.57
176 177 8.504005 GGATCCAATATTTAATGTGGAAGTACG 58.496 37.037 6.95 0.00 43.21 3.67
177 178 9.349713 TGGATCCAATATTTAATGTGGAAGTAC 57.650 33.333 13.46 3.54 43.21 2.73
178 179 9.349713 GTGGATCCAATATTTAATGTGGAAGTA 57.650 33.333 18.20 3.87 43.21 2.24
179 180 7.287696 GGTGGATCCAATATTTAATGTGGAAGT 59.712 37.037 18.20 2.23 43.21 3.01
180 181 7.506938 AGGTGGATCCAATATTTAATGTGGAAG 59.493 37.037 18.20 0.00 43.21 3.46
181 182 7.361438 AGGTGGATCCAATATTTAATGTGGAA 58.639 34.615 18.20 0.00 43.21 3.53
182 183 6.921412 AGGTGGATCCAATATTTAATGTGGA 58.079 36.000 18.20 12.50 44.07 4.02
183 184 8.163408 TCTAGGTGGATCCAATATTTAATGTGG 58.837 37.037 18.20 3.86 39.02 4.17
184 185 9.003658 GTCTAGGTGGATCCAATATTTAATGTG 57.996 37.037 18.20 0.00 39.02 3.21
185 186 8.164070 GGTCTAGGTGGATCCAATATTTAATGT 58.836 37.037 18.20 0.00 39.02 2.71
186 187 8.163408 TGGTCTAGGTGGATCCAATATTTAATG 58.837 37.037 18.20 0.28 39.02 1.90
187 188 8.164070 GTGGTCTAGGTGGATCCAATATTTAAT 58.836 37.037 18.20 0.00 39.02 1.40
188 189 7.514721 GTGGTCTAGGTGGATCCAATATTTAA 58.485 38.462 18.20 0.00 39.02 1.52
189 190 6.239487 CGTGGTCTAGGTGGATCCAATATTTA 60.239 42.308 18.20 4.07 39.02 1.40
190 191 5.454755 CGTGGTCTAGGTGGATCCAATATTT 60.455 44.000 18.20 3.02 39.02 1.40
191 192 4.040461 CGTGGTCTAGGTGGATCCAATATT 59.960 45.833 18.20 4.91 39.02 1.28
192 193 3.578716 CGTGGTCTAGGTGGATCCAATAT 59.421 47.826 18.20 7.95 39.02 1.28
193 194 2.963101 CGTGGTCTAGGTGGATCCAATA 59.037 50.000 18.20 11.71 39.02 1.90
194 195 1.762957 CGTGGTCTAGGTGGATCCAAT 59.237 52.381 18.20 11.11 39.02 3.16
195 196 1.191535 CGTGGTCTAGGTGGATCCAA 58.808 55.000 18.20 0.00 39.02 3.53
196 197 0.333652 TCGTGGTCTAGGTGGATCCA 59.666 55.000 11.44 11.44 39.02 3.41
197 198 1.409427 CTTCGTGGTCTAGGTGGATCC 59.591 57.143 4.20 4.20 0.00 3.36
198 199 2.376109 TCTTCGTGGTCTAGGTGGATC 58.624 52.381 0.00 0.00 0.00 3.36
199 200 2.526888 TCTTCGTGGTCTAGGTGGAT 57.473 50.000 0.00 0.00 0.00 3.41
200 201 2.376109 GATCTTCGTGGTCTAGGTGGA 58.624 52.381 0.00 0.00 0.00 4.02
201 202 1.065701 CGATCTTCGTGGTCTAGGTGG 59.934 57.143 0.00 0.00 34.72 4.61
202 203 2.476873 CGATCTTCGTGGTCTAGGTG 57.523 55.000 0.00 0.00 34.72 4.00
208 209 7.853437 CATATAGATGATACGATCTTCGTGGTC 59.147 40.741 12.45 10.48 43.71 4.02
209 210 7.679875 GCATATAGATGATACGATCTTCGTGGT 60.680 40.741 12.45 1.66 43.71 4.16
210 211 6.634837 GCATATAGATGATACGATCTTCGTGG 59.365 42.308 12.45 0.00 43.71 4.94
211 212 6.634837 GGCATATAGATGATACGATCTTCGTG 59.365 42.308 12.45 0.00 43.71 4.35
212 213 6.318900 TGGCATATAGATGATACGATCTTCGT 59.681 38.462 0.39 7.75 45.00 3.85
213 214 6.729187 TGGCATATAGATGATACGATCTTCG 58.271 40.000 0.39 0.00 39.62 3.79
214 215 7.935520 TCTGGCATATAGATGATACGATCTTC 58.064 38.462 0.39 0.00 34.73 2.87
215 216 7.888250 TCTGGCATATAGATGATACGATCTT 57.112 36.000 0.39 0.00 34.73 2.40
216 217 7.888250 TTCTGGCATATAGATGATACGATCT 57.112 36.000 0.39 0.00 34.73 2.75
217 218 7.436673 GGTTTCTGGCATATAGATGATACGATC 59.563 40.741 0.39 0.00 34.73 3.69
218 219 7.268586 GGTTTCTGGCATATAGATGATACGAT 58.731 38.462 0.39 0.00 34.73 3.73
219 220 6.351033 GGGTTTCTGGCATATAGATGATACGA 60.351 42.308 0.39 0.00 34.73 3.43
220 221 5.812642 GGGTTTCTGGCATATAGATGATACG 59.187 44.000 0.39 0.00 34.73 3.06
221 222 5.812642 CGGGTTTCTGGCATATAGATGATAC 59.187 44.000 0.39 0.00 34.73 2.24
222 223 5.104941 CCGGGTTTCTGGCATATAGATGATA 60.105 44.000 0.39 0.00 34.73 2.15
223 224 4.323792 CCGGGTTTCTGGCATATAGATGAT 60.324 45.833 0.39 0.00 34.73 2.45
224 225 3.007940 CCGGGTTTCTGGCATATAGATGA 59.992 47.826 0.39 0.00 34.73 2.92
225 226 3.338249 CCGGGTTTCTGGCATATAGATG 58.662 50.000 0.00 0.00 36.02 2.90
226 227 3.703001 CCGGGTTTCTGGCATATAGAT 57.297 47.619 0.00 0.00 31.78 1.98
246 247 2.124403 CTGTCCATCTGGCCCTGC 60.124 66.667 0.00 0.00 34.44 4.85
247 248 1.980784 CTCCTGTCCATCTGGCCCTG 61.981 65.000 0.00 0.00 35.49 4.45
248 249 1.692042 CTCCTGTCCATCTGGCCCT 60.692 63.158 0.00 0.00 35.49 5.19
249 250 2.750657 CCTCCTGTCCATCTGGCCC 61.751 68.421 0.00 0.00 35.49 5.80
250 251 0.691078 TACCTCCTGTCCATCTGGCC 60.691 60.000 0.00 0.00 35.49 5.36
251 252 0.755686 CTACCTCCTGTCCATCTGGC 59.244 60.000 0.00 0.00 35.49 4.85
252 253 1.759445 CACTACCTCCTGTCCATCTGG 59.241 57.143 0.00 0.00 36.63 3.86
253 254 1.759445 CCACTACCTCCTGTCCATCTG 59.241 57.143 0.00 0.00 0.00 2.90
254 255 1.967274 GCCACTACCTCCTGTCCATCT 60.967 57.143 0.00 0.00 0.00 2.90
255 256 0.466124 GCCACTACCTCCTGTCCATC 59.534 60.000 0.00 0.00 0.00 3.51
256 257 0.252696 TGCCACTACCTCCTGTCCAT 60.253 55.000 0.00 0.00 0.00 3.41
257 258 0.904865 CTGCCACTACCTCCTGTCCA 60.905 60.000 0.00 0.00 0.00 4.02
258 259 0.614979 TCTGCCACTACCTCCTGTCC 60.615 60.000 0.00 0.00 0.00 4.02
259 260 0.820871 CTCTGCCACTACCTCCTGTC 59.179 60.000 0.00 0.00 0.00 3.51
260 261 0.409876 TCTCTGCCACTACCTCCTGT 59.590 55.000 0.00 0.00 0.00 4.00
261 262 1.561643 TTCTCTGCCACTACCTCCTG 58.438 55.000 0.00 0.00 0.00 3.86
262 263 2.327325 TTTCTCTGCCACTACCTCCT 57.673 50.000 0.00 0.00 0.00 3.69
263 264 3.274288 CATTTTCTCTGCCACTACCTCC 58.726 50.000 0.00 0.00 0.00 4.30
264 265 3.274288 CCATTTTCTCTGCCACTACCTC 58.726 50.000 0.00 0.00 0.00 3.85
265 266 2.025887 CCCATTTTCTCTGCCACTACCT 60.026 50.000 0.00 0.00 0.00 3.08
266 267 2.026262 TCCCATTTTCTCTGCCACTACC 60.026 50.000 0.00 0.00 0.00 3.18
267 268 3.350219 TCCCATTTTCTCTGCCACTAC 57.650 47.619 0.00 0.00 0.00 2.73
268 269 4.042809 TCTTTCCCATTTTCTCTGCCACTA 59.957 41.667 0.00 0.00 0.00 2.74
269 270 2.978156 TTCCCATTTTCTCTGCCACT 57.022 45.000 0.00 0.00 0.00 4.00
270 271 3.157087 TCTTTCCCATTTTCTCTGCCAC 58.843 45.455 0.00 0.00 0.00 5.01
271 272 3.524095 TCTTTCCCATTTTCTCTGCCA 57.476 42.857 0.00 0.00 0.00 4.92
272 273 4.382362 CCATTCTTTCCCATTTTCTCTGCC 60.382 45.833 0.00 0.00 0.00 4.85
273 274 4.463891 TCCATTCTTTCCCATTTTCTCTGC 59.536 41.667 0.00 0.00 0.00 4.26
274 275 6.406624 CCATCCATTCTTTCCCATTTTCTCTG 60.407 42.308 0.00 0.00 0.00 3.35
275 276 5.659971 CCATCCATTCTTTCCCATTTTCTCT 59.340 40.000 0.00 0.00 0.00 3.10
276 277 5.658190 TCCATCCATTCTTTCCCATTTTCTC 59.342 40.000 0.00 0.00 0.00 2.87
277 278 5.592795 TCCATCCATTCTTTCCCATTTTCT 58.407 37.500 0.00 0.00 0.00 2.52
278 279 5.937975 TCCATCCATTCTTTCCCATTTTC 57.062 39.130 0.00 0.00 0.00 2.29
279 280 5.786975 AGTTCCATCCATTCTTTCCCATTTT 59.213 36.000 0.00 0.00 0.00 1.82
280 281 5.344566 AGTTCCATCCATTCTTTCCCATTT 58.655 37.500 0.00 0.00 0.00 2.32
281 282 4.951603 AGTTCCATCCATTCTTTCCCATT 58.048 39.130 0.00 0.00 0.00 3.16
282 283 4.540715 GAGTTCCATCCATTCTTTCCCAT 58.459 43.478 0.00 0.00 0.00 4.00
283 284 3.309121 GGAGTTCCATCCATTCTTTCCCA 60.309 47.826 0.00 0.00 39.34 4.37
284 285 3.291584 GGAGTTCCATCCATTCTTTCCC 58.708 50.000 0.00 0.00 39.34 3.97
285 286 3.291584 GGGAGTTCCATCCATTCTTTCC 58.708 50.000 0.00 0.00 41.52 3.13
286 287 2.945668 CGGGAGTTCCATCCATTCTTTC 59.054 50.000 0.00 0.00 41.52 2.62
287 288 2.308866 ACGGGAGTTCCATCCATTCTTT 59.691 45.455 0.00 0.00 43.33 2.52
288 289 1.916181 ACGGGAGTTCCATCCATTCTT 59.084 47.619 0.00 0.00 43.33 2.52
289 290 1.584724 ACGGGAGTTCCATCCATTCT 58.415 50.000 0.00 0.00 43.33 2.40
302 303 5.413969 AGTTTCGAAAAAGTAAACGGGAG 57.586 39.130 13.10 0.00 37.99 4.30
303 304 5.123661 ACAAGTTTCGAAAAAGTAAACGGGA 59.876 36.000 13.10 0.00 37.99 5.14
304 305 5.228427 CACAAGTTTCGAAAAAGTAAACGGG 59.772 40.000 13.10 0.00 37.99 5.28
305 306 5.228427 CCACAAGTTTCGAAAAAGTAAACGG 59.772 40.000 13.10 5.46 37.99 4.44
306 307 5.796437 ACCACAAGTTTCGAAAAAGTAAACG 59.204 36.000 13.10 0.00 37.99 3.60
307 308 7.115236 ACAACCACAAGTTTCGAAAAAGTAAAC 59.885 33.333 13.10 0.00 36.18 2.01
308 309 7.146648 ACAACCACAAGTTTCGAAAAAGTAAA 58.853 30.769 13.10 0.00 36.18 2.01
309 310 6.679843 ACAACCACAAGTTTCGAAAAAGTAA 58.320 32.000 13.10 0.00 36.18 2.24
310 311 6.256912 ACAACCACAAGTTTCGAAAAAGTA 57.743 33.333 13.10 0.00 36.18 2.24
311 312 5.128992 ACAACCACAAGTTTCGAAAAAGT 57.871 34.783 13.10 8.61 36.18 2.66
312 313 5.631512 TCAACAACCACAAGTTTCGAAAAAG 59.368 36.000 13.10 7.96 36.18 2.27
313 314 5.402867 GTCAACAACCACAAGTTTCGAAAAA 59.597 36.000 13.10 0.00 36.18 1.94
314 315 4.918583 GTCAACAACCACAAGTTTCGAAAA 59.081 37.500 13.10 0.00 36.18 2.29
315 316 4.023107 TGTCAACAACCACAAGTTTCGAAA 60.023 37.500 6.47 6.47 36.18 3.46
316 317 3.502595 TGTCAACAACCACAAGTTTCGAA 59.497 39.130 0.00 0.00 36.18 3.71
317 318 3.075148 TGTCAACAACCACAAGTTTCGA 58.925 40.909 0.00 0.00 36.18 3.71
318 319 3.425404 CTGTCAACAACCACAAGTTTCG 58.575 45.455 0.00 0.00 36.18 3.46
319 320 3.179048 GCTGTCAACAACCACAAGTTTC 58.821 45.455 0.00 0.00 36.18 2.78
320 321 2.094234 GGCTGTCAACAACCACAAGTTT 60.094 45.455 0.00 0.00 36.18 2.66
321 322 1.476488 GGCTGTCAACAACCACAAGTT 59.524 47.619 0.00 0.00 40.16 2.66
322 323 1.102978 GGCTGTCAACAACCACAAGT 58.897 50.000 0.00 0.00 32.52 3.16
323 324 1.066002 CTGGCTGTCAACAACCACAAG 59.934 52.381 1.14 0.00 37.20 3.16
324 325 1.102154 CTGGCTGTCAACAACCACAA 58.898 50.000 1.14 0.00 37.20 3.33
325 326 0.254462 TCTGGCTGTCAACAACCACA 59.746 50.000 1.14 0.00 37.20 4.17
326 327 1.065551 GTTCTGGCTGTCAACAACCAC 59.934 52.381 1.14 0.00 37.20 4.16
327 328 1.064758 AGTTCTGGCTGTCAACAACCA 60.065 47.619 5.24 5.24 39.58 3.67
328 329 1.604278 GAGTTCTGGCTGTCAACAACC 59.396 52.381 0.00 0.00 32.86 3.77
329 330 2.288666 TGAGTTCTGGCTGTCAACAAC 58.711 47.619 0.00 0.00 0.00 3.32
330 331 2.170397 TCTGAGTTCTGGCTGTCAACAA 59.830 45.455 0.00 0.00 0.00 2.83
331 332 1.762370 TCTGAGTTCTGGCTGTCAACA 59.238 47.619 0.00 0.00 0.00 3.33
332 333 2.533266 TCTGAGTTCTGGCTGTCAAC 57.467 50.000 0.00 0.00 0.00 3.18
333 334 3.206150 GTTTCTGAGTTCTGGCTGTCAA 58.794 45.455 0.00 0.00 0.00 3.18
334 335 2.485479 GGTTTCTGAGTTCTGGCTGTCA 60.485 50.000 0.00 0.00 0.00 3.58
335 336 2.147150 GGTTTCTGAGTTCTGGCTGTC 58.853 52.381 0.00 0.00 0.00 3.51
336 337 1.541233 CGGTTTCTGAGTTCTGGCTGT 60.541 52.381 0.00 0.00 0.00 4.40
337 338 1.151668 CGGTTTCTGAGTTCTGGCTG 58.848 55.000 0.00 0.00 0.00 4.85
338 339 0.035458 CCGGTTTCTGAGTTCTGGCT 59.965 55.000 0.00 0.00 0.00 4.75
339 340 0.034896 TCCGGTTTCTGAGTTCTGGC 59.965 55.000 0.00 0.00 0.00 4.85
340 341 2.234908 AGATCCGGTTTCTGAGTTCTGG 59.765 50.000 0.00 0.00 0.00 3.86
341 342 3.601443 AGATCCGGTTTCTGAGTTCTG 57.399 47.619 0.00 0.00 0.00 3.02
342 343 4.442192 GCATAGATCCGGTTTCTGAGTTCT 60.442 45.833 16.67 3.89 0.00 3.01
343 344 3.804873 GCATAGATCCGGTTTCTGAGTTC 59.195 47.826 16.67 2.31 0.00 3.01
344 345 3.197766 TGCATAGATCCGGTTTCTGAGTT 59.802 43.478 16.67 0.99 0.00 3.01
345 346 2.766263 TGCATAGATCCGGTTTCTGAGT 59.234 45.455 16.67 3.85 0.00 3.41
346 347 3.459232 TGCATAGATCCGGTTTCTGAG 57.541 47.619 16.67 11.09 0.00 3.35
347 348 3.904800 TTGCATAGATCCGGTTTCTGA 57.095 42.857 16.67 5.01 0.00 3.27
348 349 5.505173 AATTTGCATAGATCCGGTTTCTG 57.495 39.130 16.67 6.14 0.00 3.02
349 350 5.239525 GCTAATTTGCATAGATCCGGTTTCT 59.760 40.000 7.02 8.15 0.00 2.52
350 351 5.239525 AGCTAATTTGCATAGATCCGGTTTC 59.760 40.000 14.27 0.00 34.99 2.78
351 352 5.133221 AGCTAATTTGCATAGATCCGGTTT 58.867 37.500 14.27 0.00 34.99 3.27
352 353 4.718961 AGCTAATTTGCATAGATCCGGTT 58.281 39.130 14.27 0.00 34.99 4.44
353 354 4.040952 AGAGCTAATTTGCATAGATCCGGT 59.959 41.667 14.27 0.00 36.66 5.28
354 355 4.573900 AGAGCTAATTTGCATAGATCCGG 58.426 43.478 14.27 0.00 36.66 5.14
355 356 5.233225 TGAGAGCTAATTTGCATAGATCCG 58.767 41.667 14.27 0.00 36.66 4.18
356 357 6.933521 TCTTGAGAGCTAATTTGCATAGATCC 59.066 38.462 14.27 1.65 36.66 3.36
357 358 7.959689 TCTTGAGAGCTAATTTGCATAGATC 57.040 36.000 14.27 3.41 36.33 2.75
358 359 7.966246 CTCTTGAGAGCTAATTTGCATAGAT 57.034 36.000 14.27 0.00 35.13 1.98
382 383 3.181516 CGTTTCACTCTAGGAGCATTTGC 60.182 47.826 0.00 0.00 42.49 3.68
383 384 4.245660 TCGTTTCACTCTAGGAGCATTTG 58.754 43.478 0.00 0.00 32.04 2.32
384 385 4.537135 TCGTTTCACTCTAGGAGCATTT 57.463 40.909 0.00 0.00 32.04 2.32
385 386 4.537135 TTCGTTTCACTCTAGGAGCATT 57.463 40.909 0.00 0.00 32.04 3.56
386 387 4.160439 TCATTCGTTTCACTCTAGGAGCAT 59.840 41.667 0.00 0.00 32.04 3.79
387 388 3.509967 TCATTCGTTTCACTCTAGGAGCA 59.490 43.478 0.00 0.00 32.04 4.26
388 389 4.111375 TCATTCGTTTCACTCTAGGAGC 57.889 45.455 0.00 0.00 32.04 4.70
389 390 5.655488 ACATCATTCGTTTCACTCTAGGAG 58.345 41.667 0.00 0.00 35.52 3.69
390 391 5.661056 ACATCATTCGTTTCACTCTAGGA 57.339 39.130 0.00 0.00 0.00 2.94
391 392 7.706607 TCAATACATCATTCGTTTCACTCTAGG 59.293 37.037 0.00 0.00 0.00 3.02
392 393 8.634475 TCAATACATCATTCGTTTCACTCTAG 57.366 34.615 0.00 0.00 0.00 2.43
393 394 9.034544 CATCAATACATCATTCGTTTCACTCTA 57.965 33.333 0.00 0.00 0.00 2.43
394 395 7.550551 ACATCAATACATCATTCGTTTCACTCT 59.449 33.333 0.00 0.00 0.00 3.24
395 396 7.688372 ACATCAATACATCATTCGTTTCACTC 58.312 34.615 0.00 0.00 0.00 3.51
396 397 7.334171 TGACATCAATACATCATTCGTTTCACT 59.666 33.333 0.00 0.00 0.00 3.41
397 398 7.463544 TGACATCAATACATCATTCGTTTCAC 58.536 34.615 0.00 0.00 0.00 3.18
398 399 7.608308 TGACATCAATACATCATTCGTTTCA 57.392 32.000 0.00 0.00 0.00 2.69
399 400 8.894409 TTTGACATCAATACATCATTCGTTTC 57.106 30.769 0.00 0.00 35.55 2.78
400 401 9.345517 CTTTTGACATCAATACATCATTCGTTT 57.654 29.630 0.00 0.00 35.55 3.60
401 402 8.729756 TCTTTTGACATCAATACATCATTCGTT 58.270 29.630 0.00 0.00 35.55 3.85
402 403 8.267620 TCTTTTGACATCAATACATCATTCGT 57.732 30.769 0.00 0.00 35.55 3.85
403 404 9.726232 ATTCTTTTGACATCAATACATCATTCG 57.274 29.630 0.00 0.00 35.55 3.34
407 408 8.611757 CGGTATTCTTTTGACATCAATACATCA 58.388 33.333 0.00 0.00 35.55 3.07
408 409 8.070171 CCGGTATTCTTTTGACATCAATACATC 58.930 37.037 0.00 0.00 35.55 3.06
409 410 7.013274 CCCGGTATTCTTTTGACATCAATACAT 59.987 37.037 0.00 0.00 35.55 2.29
410 411 6.317642 CCCGGTATTCTTTTGACATCAATACA 59.682 38.462 0.00 0.00 35.55 2.29
411 412 6.540914 TCCCGGTATTCTTTTGACATCAATAC 59.459 38.462 0.00 0.00 35.55 1.89
412 413 6.654959 TCCCGGTATTCTTTTGACATCAATA 58.345 36.000 0.00 0.00 35.55 1.90
413 414 5.505780 TCCCGGTATTCTTTTGACATCAAT 58.494 37.500 0.00 0.00 35.55 2.57
414 415 4.912586 TCCCGGTATTCTTTTGACATCAA 58.087 39.130 0.00 0.00 0.00 2.57
415 416 4.561500 TCCCGGTATTCTTTTGACATCA 57.438 40.909 0.00 0.00 0.00 3.07
416 417 5.183228 TCTTCCCGGTATTCTTTTGACATC 58.817 41.667 0.00 0.00 0.00 3.06
417 418 5.174037 TCTTCCCGGTATTCTTTTGACAT 57.826 39.130 0.00 0.00 0.00 3.06
418 419 4.627284 TCTTCCCGGTATTCTTTTGACA 57.373 40.909 0.00 0.00 0.00 3.58
419 420 5.952526 TTTCTTCCCGGTATTCTTTTGAC 57.047 39.130 0.00 0.00 0.00 3.18
420 421 6.963083 TTTTTCTTCCCGGTATTCTTTTGA 57.037 33.333 0.00 0.00 0.00 2.69
441 442 4.759693 TGGAGATGTGAATGCGTACTTTTT 59.240 37.500 0.00 0.00 0.00 1.94
442 443 4.323417 TGGAGATGTGAATGCGTACTTTT 58.677 39.130 0.00 0.00 0.00 2.27
443 444 3.937814 TGGAGATGTGAATGCGTACTTT 58.062 40.909 0.00 0.00 0.00 2.66
444 445 3.610040 TGGAGATGTGAATGCGTACTT 57.390 42.857 0.00 0.00 0.00 2.24
445 446 3.827008 ATGGAGATGTGAATGCGTACT 57.173 42.857 0.00 0.00 0.00 2.73
446 447 4.882671 AAATGGAGATGTGAATGCGTAC 57.117 40.909 0.00 0.00 0.00 3.67
447 448 6.054941 ACATAAATGGAGATGTGAATGCGTA 58.945 36.000 0.00 0.00 34.98 4.42
448 449 4.883585 ACATAAATGGAGATGTGAATGCGT 59.116 37.500 0.00 0.00 34.98 5.24
449 450 5.428496 ACATAAATGGAGATGTGAATGCG 57.572 39.130 0.00 0.00 34.98 4.73
450 451 6.805271 GCATACATAAATGGAGATGTGAATGC 59.195 38.462 6.88 6.88 39.22 3.56
451 452 7.806487 GTGCATACATAAATGGAGATGTGAATG 59.194 37.037 0.00 0.00 36.92 2.67
452 453 7.503230 TGTGCATACATAAATGGAGATGTGAAT 59.497 33.333 0.00 0.00 36.92 2.57
453 454 6.827762 TGTGCATACATAAATGGAGATGTGAA 59.172 34.615 0.00 0.00 36.92 3.18
454 455 6.355747 TGTGCATACATAAATGGAGATGTGA 58.644 36.000 0.00 0.00 36.92 3.58
455 456 6.622833 TGTGCATACATAAATGGAGATGTG 57.377 37.500 0.00 0.00 36.92 3.21
456 457 7.210718 CATGTGCATACATAAATGGAGATGT 57.789 36.000 7.14 0.00 45.53 3.06
470 471 9.418045 AGGTGTTTAAAATTTACATGTGCATAC 57.582 29.630 9.11 0.00 0.00 2.39
478 479 7.239763 CCAGGGAGGTGTTTAAAATTTACAT 57.760 36.000 0.00 0.00 0.00 2.29
512 513 2.232941 TCTTCGTTGTGTAGGTGGATCC 59.767 50.000 4.20 4.20 0.00 3.36
523 524 7.904977 CACATAGGTAAAATCATCTTCGTTGTG 59.095 37.037 0.00 0.00 0.00 3.33
524 525 7.606456 ACACATAGGTAAAATCATCTTCGTTGT 59.394 33.333 0.00 0.00 0.00 3.32
536 537 6.457799 GCCGATTTTCGACACATAGGTAAAAT 60.458 38.462 0.00 0.00 43.74 1.82
537 538 5.163834 GCCGATTTTCGACACATAGGTAAAA 60.164 40.000 0.00 0.00 43.74 1.52
538 539 4.330620 GCCGATTTTCGACACATAGGTAAA 59.669 41.667 0.00 0.00 43.74 2.01
592 593 5.181690 TGTCCGTTGAAAGAAAATCCAAG 57.818 39.130 0.00 0.00 0.00 3.61
604 605 3.678056 AGAGTAGCATTGTCCGTTGAA 57.322 42.857 0.00 0.00 0.00 2.69
607 608 2.354805 GGGAAGAGTAGCATTGTCCGTT 60.355 50.000 0.00 0.00 0.00 4.44
618 619 2.194201 TTTTTGCGGGGGAAGAGTAG 57.806 50.000 0.00 0.00 0.00 2.57
639 640 5.346281 CCTCGACTAAGAGTGACATTGTTTC 59.654 44.000 0.00 0.00 36.56 2.78
644 645 4.523173 TGAACCTCGACTAAGAGTGACATT 59.477 41.667 0.00 0.00 36.56 2.71
656 657 2.891580 TGTAGAGCTTTGAACCTCGACT 59.108 45.455 0.00 0.00 35.56 4.18
657 658 2.987821 GTGTAGAGCTTTGAACCTCGAC 59.012 50.000 0.00 0.00 35.24 4.20
658 659 2.626266 TGTGTAGAGCTTTGAACCTCGA 59.374 45.455 0.00 0.00 33.39 4.04
659 660 3.026630 TGTGTAGAGCTTTGAACCTCG 57.973 47.619 0.00 0.00 33.39 4.63
660 661 3.614616 CGATGTGTAGAGCTTTGAACCTC 59.385 47.826 0.00 0.00 0.00 3.85
662 663 3.585862 TCGATGTGTAGAGCTTTGAACC 58.414 45.455 0.00 0.00 0.00 3.62
664 665 5.072040 TCATCGATGTGTAGAGCTTTGAA 57.928 39.130 24.09 0.00 0.00 2.69
666 667 3.801050 CCTCATCGATGTGTAGAGCTTTG 59.199 47.826 24.09 3.19 0.00 2.77
667 668 3.449018 ACCTCATCGATGTGTAGAGCTTT 59.551 43.478 24.09 0.00 0.00 3.51
668 669 3.027412 ACCTCATCGATGTGTAGAGCTT 58.973 45.455 24.09 2.12 0.00 3.74
712 714 2.192861 TTGACCGTTGGCAGCAAGG 61.193 57.895 1.39 0.00 0.00 3.61
713 715 1.008538 GTTGACCGTTGGCAGCAAG 60.009 57.895 1.39 0.00 0.00 4.01
722 724 4.899502 AGATCTCTCAATTGTTGACCGTT 58.100 39.130 5.13 0.00 35.46 4.44
724 726 7.545362 AATAAGATCTCTCAATTGTTGACCG 57.455 36.000 5.13 0.00 35.46 4.79
730 732 7.621991 CGCGTAAAATAAGATCTCTCAATTGT 58.378 34.615 5.13 0.00 0.00 2.71
737 739 4.504461 CACTGCGCGTAAAATAAGATCTCT 59.496 41.667 8.43 0.00 0.00 3.10
749 751 0.599558 AGGAAGTACACTGCGCGTAA 59.400 50.000 8.43 0.00 0.00 3.18
751 753 1.080705 GAGGAAGTACACTGCGCGT 60.081 57.895 8.43 0.01 0.00 6.01
752 754 1.805945 GGAGGAAGTACACTGCGCG 60.806 63.158 0.00 0.00 0.00 6.86
753 755 0.108138 ATGGAGGAAGTACACTGCGC 60.108 55.000 0.00 0.00 0.00 6.09
795 797 9.981114 CACCCTCTTTTATTTTTGACTAATGTT 57.019 29.630 0.00 0.00 0.00 2.71
799 801 8.528044 ACACACCCTCTTTTATTTTTGACTAA 57.472 30.769 0.00 0.00 0.00 2.24
806 808 8.364894 GGACATTTACACACCCTCTTTTATTTT 58.635 33.333 0.00 0.00 0.00 1.82
807 809 7.507616 TGGACATTTACACACCCTCTTTTATTT 59.492 33.333 0.00 0.00 0.00 1.40
818 820 2.172851 TCCGTGGACATTTACACACC 57.827 50.000 0.00 0.00 37.45 4.16
824 826 5.461032 AAAAAGCATTCCGTGGACATTTA 57.539 34.783 0.00 0.00 0.00 1.40
900 942 2.228480 CCCCTTCCCGTTTCCCTGA 61.228 63.158 0.00 0.00 0.00 3.86
902 944 2.939353 CCCCCTTCCCGTTTCCCT 60.939 66.667 0.00 0.00 0.00 4.20
1202 1254 1.645704 TACTCAGTCAGCGGCGAGAC 61.646 60.000 20.50 20.50 35.02 3.36
1216 1268 0.830648 CCCGATCAAAGCCCTACTCA 59.169 55.000 0.00 0.00 0.00 3.41
1218 1270 0.983378 AGCCCGATCAAAGCCCTACT 60.983 55.000 0.00 0.00 0.00 2.57
1219 1271 0.815615 CAGCCCGATCAAAGCCCTAC 60.816 60.000 0.00 0.00 0.00 3.18
1267 1334 3.009192 AATTGTGCAGGCGGGCATG 62.009 57.895 9.96 0.20 46.92 4.06
1268 1335 2.681064 AATTGTGCAGGCGGGCAT 60.681 55.556 9.96 0.00 46.92 4.40
1269 1336 3.682885 CAATTGTGCAGGCGGGCA 61.683 61.111 3.78 2.71 42.53 5.36
1270 1337 4.440127 CCAATTGTGCAGGCGGGC 62.440 66.667 4.43 0.00 0.00 6.13
1288 1355 2.300437 GGATCACCCCCTAAATCGAGAG 59.700 54.545 0.00 0.00 0.00 3.20
1374 1441 5.888161 TCTTTCCCAATTCTCCTATTTCAGC 59.112 40.000 0.00 0.00 0.00 4.26
1480 1548 7.212976 AGAGATACACATGGCATTTACAGTAG 58.787 38.462 0.00 0.00 0.00 2.57
1534 1608 2.415512 GCCGGAATAGTTCAAGTGTGAC 59.584 50.000 5.05 0.00 31.90 3.67
1535 1609 2.037902 TGCCGGAATAGTTCAAGTGTGA 59.962 45.455 5.05 0.00 0.00 3.58
1582 1656 5.129634 TCTTCCAATAAAACTGTGTCTGCA 58.870 37.500 0.00 0.00 0.00 4.41
1583 1657 5.470098 TCTCTTCCAATAAAACTGTGTCTGC 59.530 40.000 0.00 0.00 0.00 4.26
1584 1658 7.442364 TCTTCTCTTCCAATAAAACTGTGTCTG 59.558 37.037 0.00 0.00 0.00 3.51
1586 1660 7.442666 AGTCTTCTCTTCCAATAAAACTGTGTC 59.557 37.037 0.00 0.00 0.00 3.67
1587 1661 7.283329 AGTCTTCTCTTCCAATAAAACTGTGT 58.717 34.615 0.00 0.00 0.00 3.72
1588 1662 7.736447 AGTCTTCTCTTCCAATAAAACTGTG 57.264 36.000 0.00 0.00 0.00 3.66
1602 1700 8.999431 TGCGAAATAACAAATTAGTCTTCTCTT 58.001 29.630 0.00 0.00 0.00 2.85
1608 1706 7.312154 TGCATTGCGAAATAACAAATTAGTCT 58.688 30.769 3.84 0.00 0.00 3.24
1621 1719 1.216178 GCACCCTGCATTGCGAAAT 59.784 52.632 3.84 0.00 44.26 2.17
1642 1740 3.682718 CGAGCTCCTGTAACCATCCATTT 60.683 47.826 8.47 0.00 0.00 2.32
1670 1768 0.179004 ATGTGCCGTTGTTTCCCTGA 60.179 50.000 0.00 0.00 0.00 3.86
1744 1842 3.096791 CGGACCGAGTAGACCGTC 58.903 66.667 8.64 0.00 40.42 4.79
1815 1913 1.180456 TTCAGCCATGCCAACACCAG 61.180 55.000 0.00 0.00 0.00 4.00
1922 2020 2.378445 TTTGATTGCGATCCGACTCA 57.622 45.000 11.55 0.00 0.00 3.41
2033 2131 4.043596 AGATGCATACCCTTTCTTCCTCT 58.956 43.478 0.00 0.00 0.00 3.69
2081 2179 8.379902 GCCTTAACAAAATTGTATGTAACATGC 58.620 33.333 0.00 0.00 41.31 4.06
2088 2186 8.580720 TGTGTATGCCTTAACAAAATTGTATGT 58.419 29.630 0.00 0.00 41.31 2.29
2111 2209 3.865164 TGAACTATCTGCGCAAGTATGTG 59.135 43.478 13.05 0.00 40.10 3.21
2266 2366 1.094785 CAAGAGCAAATGTACCCGGG 58.905 55.000 22.25 22.25 0.00 5.73
2346 2446 3.147595 CTCCATCGTCCGAGCCCA 61.148 66.667 0.00 0.00 0.00 5.36
2359 2459 3.889525 ATGCCCACAGTCCCCTCCA 62.890 63.158 0.00 0.00 0.00 3.86
2466 2569 4.730487 GCAGTGTGCCCAAGAGAT 57.270 55.556 0.00 0.00 37.42 2.75
2592 2695 1.804151 TCCAAATGTGTAAGAGCACGC 59.196 47.619 0.00 0.00 41.94 5.34
2645 2749 7.283127 GCCATATGAACCAGTAAGAGAAATTCA 59.717 37.037 3.65 0.00 0.00 2.57
2672 2776 0.118346 TACTCCAGGCCTTCCAGGAA 59.882 55.000 0.00 0.71 45.99 3.36
2755 2859 5.362263 ACGTAGTTTTGGTGTGATAGTGTT 58.638 37.500 0.00 0.00 37.78 3.32
2779 2883 2.232452 CTGTGTCCAGTTAGGGTGAGAG 59.768 54.545 0.00 0.00 38.24 3.20
2921 3028 2.089980 CCCTGATTCAACAAGCTCCTG 58.910 52.381 0.00 0.00 0.00 3.86
3070 3177 5.496556 CCAACACCAACATATAGTCTTCCA 58.503 41.667 0.00 0.00 0.00 3.53
3546 3656 1.926511 GCTTCACCATCAGGCCAACG 61.927 60.000 5.01 0.00 39.06 4.10
3725 3835 3.733337 GTCTTCCTTGAGCTCTTTCACA 58.267 45.455 16.19 0.00 0.00 3.58
3746 3856 2.287188 ACATGCTTGTTCAAAGTGCTCG 60.287 45.455 0.00 0.00 29.55 5.03
3788 3898 5.419788 TGCTATCATGTCTTTTCCATTTGCT 59.580 36.000 0.00 0.00 0.00 3.91
3893 4003 3.771577 TCCAACCTTCTCTGAAGTTCC 57.228 47.619 0.00 0.00 0.00 3.62
3988 4098 0.305009 TCGTCGAGCGATGATCTCAC 59.695 55.000 10.46 0.00 45.68 3.51
4479 4591 2.851263 ATGTGCCTTCCGAGTTACAA 57.149 45.000 0.00 0.00 0.00 2.41
4882 4994 6.185511 TCTCTCACCGTCTATTCTTTCCTAA 58.814 40.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.