Multiple sequence alignment - TraesCS6D01G063200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G063200 chr6D 100.000 2597 0 0 1 2597 29741312 29738716 0.000000e+00 4796.0
1 TraesCS6D01G063200 chr6D 100.000 89 0 0 231 319 101445685 101445597 5.750000e-37 165.0
2 TraesCS6D01G063200 chr6D 100.000 89 0 0 232 320 414526257 414526169 5.750000e-37 165.0
3 TraesCS6D01G063200 chr6D 96.667 90 3 0 1085 1174 29740303 29740214 1.610000e-32 150.0
4 TraesCS6D01G063200 chr6D 87.826 115 12 2 1016 1129 29740252 29740139 1.620000e-27 134.0
5 TraesCS6D01G063200 chr6D 87.826 115 12 2 1061 1174 29740297 29740184 1.620000e-27 134.0
6 TraesCS6D01G063200 chr6D 97.436 39 1 0 1136 1174 29740297 29740259 1.670000e-07 67.6
7 TraesCS6D01G063200 chr6A 89.053 1690 67 40 645 2282 32919078 32920701 0.000000e+00 1988.0
8 TraesCS6D01G063200 chr6A 98.730 315 4 0 2283 2597 70915996 70916310 6.280000e-156 560.0
9 TraesCS6D01G063200 chr6A 96.691 272 5 4 370 641 32918779 32919046 1.420000e-122 449.0
10 TraesCS6D01G063200 chr6A 95.050 101 2 1 1010 1110 32919562 32919659 3.460000e-34 156.0
11 TraesCS6D01G063200 chr6A 91.579 95 5 2 1083 1174 32919467 32919561 7.540000e-26 128.0
12 TraesCS6D01G063200 chr6B 88.107 1236 71 33 1085 2282 58076902 58078099 0.000000e+00 1399.0
13 TraesCS6D01G063200 chr6B 85.047 749 57 16 385 1099 58076267 58076994 0.000000e+00 712.0
14 TraesCS6D01G063200 chr6B 89.474 95 9 1 232 326 576199690 576199783 4.540000e-23 119.0
15 TraesCS6D01G063200 chr6B 84.375 96 11 4 232 325 517835308 517835401 9.900000e-15 91.6
16 TraesCS6D01G063200 chr3B 100.000 315 0 0 2283 2597 4271511 4271825 1.340000e-162 582.0
17 TraesCS6D01G063200 chr3B 100.000 315 0 0 2283 2597 7751582 7751896 1.340000e-162 582.0
18 TraesCS6D01G063200 chr3B 91.905 210 9 1 34 235 502817503 502817712 1.180000e-73 287.0
19 TraesCS6D01G063200 chr3B 98.701 77 1 0 314 390 502817708 502817784 1.250000e-28 137.0
20 TraesCS6D01G063200 chr3B 83.654 104 15 1 224 325 425396631 425396528 2.130000e-16 97.1
21 TraesCS6D01G063200 chr7D 99.048 315 3 0 2283 2597 22533884 22533570 1.350000e-157 566.0
22 TraesCS6D01G063200 chr7D 94.488 254 12 2 2283 2534 22531190 22531443 8.710000e-105 390.0
23 TraesCS6D01G063200 chr7D 95.954 173 7 0 63 235 343969727 343969899 5.470000e-72 281.0
24 TraesCS6D01G063200 chr7D 100.000 89 0 0 231 319 201092892 201092804 5.750000e-37 165.0
25 TraesCS6D01G063200 chr7D 98.925 93 0 1 228 319 243707064 243706972 5.750000e-37 165.0
26 TraesCS6D01G063200 chr7D 100.000 89 0 0 231 319 356214610 356214522 5.750000e-37 165.0
27 TraesCS6D01G063200 chr7D 97.333 75 2 0 314 388 343969895 343969969 7.540000e-26 128.0
28 TraesCS6D01G063200 chr2A 99.048 315 3 0 2283 2597 277145336 277145022 1.350000e-157 566.0
29 TraesCS6D01G063200 chr2A 94.510 255 12 2 2282 2534 277142641 277142895 2.420000e-105 392.0
30 TraesCS6D01G063200 chr2A 100.000 28 0 0 1 28 385324874 385324847 5.000000e-03 52.8
31 TraesCS6D01G063200 chr7A 98.734 316 4 0 2282 2597 275271072 275271387 1.740000e-156 562.0
32 TraesCS6D01G063200 chr7A 91.878 197 16 0 38 234 649920560 649920756 2.550000e-70 276.0
33 TraesCS6D01G063200 chr7A 94.937 158 8 0 78 235 65919829 65919986 5.550000e-62 248.0
34 TraesCS6D01G063200 chr7A 97.333 75 2 0 314 388 364000789 364000863 7.540000e-26 128.0
35 TraesCS6D01G063200 chr7A 98.438 64 1 0 314 377 65919982 65920045 2.110000e-21 113.0
36 TraesCS6D01G063200 chr5A 91.760 267 20 2 2283 2549 421251118 421251382 1.140000e-98 370.0
37 TraesCS6D01G063200 chr5A 100.000 90 0 0 231 320 326533379 326533290 1.600000e-37 167.0
38 TraesCS6D01G063200 chr5A 94.444 72 4 0 314 385 478009508 478009437 7.600000e-21 111.0
39 TraesCS6D01G063200 chr7B 84.576 389 29 7 1894 2281 94997005 94996647 8.840000e-95 357.0
40 TraesCS6D01G063200 chr7B 95.376 173 8 0 63 235 340655969 340656141 2.550000e-70 276.0
41 TraesCS6D01G063200 chr1A 98.020 202 4 0 34 235 302582662 302582461 4.110000e-93 351.0
42 TraesCS6D01G063200 chr1A 100.000 89 0 0 231 319 338153330 338153242 5.750000e-37 165.0
43 TraesCS6D01G063200 chr1A 100.000 89 0 0 231 319 493137921 493138009 5.750000e-37 165.0
44 TraesCS6D01G063200 chr4B 94.608 204 9 1 34 235 349121079 349121282 5.390000e-82 315.0
45 TraesCS6D01G063200 chr4B 100.000 74 0 0 314 387 349121278 349121351 1.250000e-28 137.0
46 TraesCS6D01G063200 chr4B 85.567 97 9 5 230 324 1994883 1994976 2.130000e-16 97.1
47 TraesCS6D01G063200 chr4B 97.368 38 0 1 351 387 25010151 25010114 2.160000e-06 63.9
48 TraesCS6D01G063200 chr4A 94.118 204 10 1 34 235 311611359 311611562 2.510000e-80 309.0
49 TraesCS6D01G063200 chr4A 91.878 197 16 0 38 234 524291135 524291331 2.550000e-70 276.0
50 TraesCS6D01G063200 chr4A 100.000 72 0 0 314 385 311611558 311611629 1.620000e-27 134.0
51 TraesCS6D01G063200 chr4A 89.691 97 8 2 231 327 179143913 179144007 3.510000e-24 122.0
52 TraesCS6D01G063200 chr4A 82.828 99 11 6 230 325 58886874 58886779 1.660000e-12 84.2
53 TraesCS6D01G063200 chr5B 94.828 174 8 1 63 235 482184109 482183936 1.180000e-68 270.0
54 TraesCS6D01G063200 chr5B 92.593 81 4 2 314 394 482183940 482183862 5.870000e-22 115.0
55 TraesCS6D01G063200 chr5B 82.692 104 10 7 229 325 600216138 600216240 4.600000e-13 86.1
56 TraesCS6D01G063200 chr5B 85.714 77 10 1 1016 1092 63850903 63850828 2.140000e-11 80.5
57 TraesCS6D01G063200 chr4D 80.206 389 30 14 1894 2282 358698419 358698760 5.550000e-62 248.0
58 TraesCS6D01G063200 chr5D 100.000 89 0 0 231 319 79602573 79602485 5.750000e-37 165.0
59 TraesCS6D01G063200 chr3A 93.750 96 6 0 229 324 40999044 40999139 7.490000e-31 145.0
60 TraesCS6D01G063200 chr2B 83.505 97 13 3 230 325 383068699 383068793 1.280000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G063200 chr6D 29738716 29741312 2596 True 1056.32 4796 93.95100 1 2597 5 chr6D.!!$R3 2596
1 TraesCS6D01G063200 chr6A 32918779 32920701 1922 False 680.25 1988 93.09325 370 2282 4 chr6A.!!$F2 1912
2 TraesCS6D01G063200 chr6B 58076267 58078099 1832 False 1055.50 1399 86.57700 385 2282 2 chr6B.!!$F3 1897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
315 316 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.0 0.0 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 2152 0.30776 GAGTTGGTTGGTTCTGTGCG 59.692 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.456296 TGCCACTCATCAACATCTGC 58.544 50.000 0.00 0.00 0.00 4.26
21 22 1.271488 TGCCACTCATCAACATCTGCA 60.271 47.619 0.00 0.00 0.00 4.41
22 23 1.814394 GCCACTCATCAACATCTGCAA 59.186 47.619 0.00 0.00 0.00 4.08
23 24 2.415090 GCCACTCATCAACATCTGCAAC 60.415 50.000 0.00 0.00 0.00 4.17
24 25 2.815503 CCACTCATCAACATCTGCAACA 59.184 45.455 0.00 0.00 0.00 3.33
25 26 3.442625 CCACTCATCAACATCTGCAACAT 59.557 43.478 0.00 0.00 0.00 2.71
26 27 4.438336 CCACTCATCAACATCTGCAACATC 60.438 45.833 0.00 0.00 0.00 3.06
27 28 4.395231 CACTCATCAACATCTGCAACATCT 59.605 41.667 0.00 0.00 0.00 2.90
28 29 4.395231 ACTCATCAACATCTGCAACATCTG 59.605 41.667 0.00 0.00 0.00 2.90
40 41 4.944962 GCAACATCTGCGGCATATATAA 57.055 40.909 1.75 0.00 42.37 0.98
41 42 5.295431 GCAACATCTGCGGCATATATAAA 57.705 39.130 1.75 0.00 42.37 1.40
42 43 5.088739 GCAACATCTGCGGCATATATAAAC 58.911 41.667 1.75 0.00 42.37 2.01
43 44 5.334802 GCAACATCTGCGGCATATATAAACA 60.335 40.000 1.75 0.00 42.37 2.83
44 45 5.862924 ACATCTGCGGCATATATAAACAC 57.137 39.130 1.75 0.00 0.00 3.32
45 46 5.551233 ACATCTGCGGCATATATAAACACT 58.449 37.500 1.75 0.00 0.00 3.55
46 47 5.997746 ACATCTGCGGCATATATAAACACTT 59.002 36.000 1.75 0.00 0.00 3.16
47 48 5.922739 TCTGCGGCATATATAAACACTTG 57.077 39.130 1.75 0.00 0.00 3.16
48 49 5.606505 TCTGCGGCATATATAAACACTTGA 58.393 37.500 1.75 0.00 0.00 3.02
49 50 6.052360 TCTGCGGCATATATAAACACTTGAA 58.948 36.000 1.75 0.00 0.00 2.69
50 51 6.540551 TCTGCGGCATATATAAACACTTGAAA 59.459 34.615 1.75 0.00 0.00 2.69
51 52 7.228507 TCTGCGGCATATATAAACACTTGAAAT 59.771 33.333 1.75 0.00 0.00 2.17
52 53 8.384607 TGCGGCATATATAAACACTTGAAATA 57.615 30.769 0.00 0.00 0.00 1.40
53 54 8.841300 TGCGGCATATATAAACACTTGAAATAA 58.159 29.630 0.00 0.00 0.00 1.40
54 55 9.840427 GCGGCATATATAAACACTTGAAATAAT 57.160 29.630 0.00 0.00 0.00 1.28
113 114 9.193133 ACTGCATATGTATTACTTTTAGCTACG 57.807 33.333 4.29 0.00 0.00 3.51
114 115 8.014322 TGCATATGTATTACTTTTAGCTACGC 57.986 34.615 4.29 0.00 0.00 4.42
115 116 7.654116 TGCATATGTATTACTTTTAGCTACGCA 59.346 33.333 4.29 0.00 0.00 5.24
116 117 8.492748 GCATATGTATTACTTTTAGCTACGCAA 58.507 33.333 4.29 0.00 0.00 4.85
120 121 9.931210 ATGTATTACTTTTAGCTACGCAATTTC 57.069 29.630 0.00 0.00 0.00 2.17
121 122 8.392612 TGTATTACTTTTAGCTACGCAATTTCC 58.607 33.333 0.00 0.00 0.00 3.13
122 123 7.625828 ATTACTTTTAGCTACGCAATTTCCT 57.374 32.000 0.00 0.00 0.00 3.36
123 124 5.547181 ACTTTTAGCTACGCAATTTCCTC 57.453 39.130 0.00 0.00 0.00 3.71
124 125 4.395231 ACTTTTAGCTACGCAATTTCCTCC 59.605 41.667 0.00 0.00 0.00 4.30
125 126 2.218953 TAGCTACGCAATTTCCTCCG 57.781 50.000 0.00 0.00 0.00 4.63
126 127 0.535335 AGCTACGCAATTTCCTCCGA 59.465 50.000 0.00 0.00 0.00 4.55
127 128 0.651031 GCTACGCAATTTCCTCCGAC 59.349 55.000 0.00 0.00 0.00 4.79
128 129 2.004583 CTACGCAATTTCCTCCGACA 57.995 50.000 0.00 0.00 0.00 4.35
129 130 1.927174 CTACGCAATTTCCTCCGACAG 59.073 52.381 0.00 0.00 0.00 3.51
130 131 1.298859 ACGCAATTTCCTCCGACAGC 61.299 55.000 0.00 0.00 0.00 4.40
131 132 1.803289 GCAATTTCCTCCGACAGCC 59.197 57.895 0.00 0.00 0.00 4.85
132 133 0.960364 GCAATTTCCTCCGACAGCCA 60.960 55.000 0.00 0.00 0.00 4.75
133 134 1.533625 CAATTTCCTCCGACAGCCAA 58.466 50.000 0.00 0.00 0.00 4.52
134 135 1.885887 CAATTTCCTCCGACAGCCAAA 59.114 47.619 0.00 0.00 0.00 3.28
135 136 1.826385 ATTTCCTCCGACAGCCAAAG 58.174 50.000 0.00 0.00 0.00 2.77
136 137 0.250727 TTTCCTCCGACAGCCAAAGG 60.251 55.000 0.00 0.00 0.00 3.11
137 138 1.415672 TTCCTCCGACAGCCAAAGGT 61.416 55.000 0.00 0.00 0.00 3.50
138 139 1.073199 CCTCCGACAGCCAAAGGTT 59.927 57.895 0.00 0.00 0.00 3.50
139 140 0.537371 CCTCCGACAGCCAAAGGTTT 60.537 55.000 0.00 0.00 0.00 3.27
140 141 0.593128 CTCCGACAGCCAAAGGTTTG 59.407 55.000 0.00 0.00 37.90 2.93
141 142 0.106918 TCCGACAGCCAAAGGTTTGT 60.107 50.000 1.94 0.00 36.45 2.83
142 143 0.310854 CCGACAGCCAAAGGTTTGTC 59.689 55.000 10.70 10.70 36.67 3.18
143 144 1.308998 CGACAGCCAAAGGTTTGTCT 58.691 50.000 15.59 0.00 37.32 3.41
144 145 2.489971 CGACAGCCAAAGGTTTGTCTA 58.510 47.619 15.59 0.00 37.32 2.59
145 146 3.074412 CGACAGCCAAAGGTTTGTCTAT 58.926 45.455 15.59 0.00 37.32 1.98
146 147 3.502211 CGACAGCCAAAGGTTTGTCTATT 59.498 43.478 15.59 0.00 37.32 1.73
147 148 4.693566 CGACAGCCAAAGGTTTGTCTATTA 59.306 41.667 15.59 0.00 37.32 0.98
148 149 5.163854 CGACAGCCAAAGGTTTGTCTATTAG 60.164 44.000 15.59 0.00 37.32 1.73
149 150 5.631119 ACAGCCAAAGGTTTGTCTATTAGT 58.369 37.500 1.94 0.00 36.45 2.24
150 151 6.775708 ACAGCCAAAGGTTTGTCTATTAGTA 58.224 36.000 1.94 0.00 36.45 1.82
151 152 7.402862 ACAGCCAAAGGTTTGTCTATTAGTAT 58.597 34.615 1.94 0.00 36.45 2.12
152 153 7.553044 ACAGCCAAAGGTTTGTCTATTAGTATC 59.447 37.037 1.94 0.00 36.45 2.24
153 154 7.770897 CAGCCAAAGGTTTGTCTATTAGTATCT 59.229 37.037 1.94 0.00 36.45 1.98
154 155 8.329502 AGCCAAAGGTTTGTCTATTAGTATCTT 58.670 33.333 1.94 0.00 36.45 2.40
155 156 8.957466 GCCAAAGGTTTGTCTATTAGTATCTTT 58.043 33.333 1.94 0.00 36.45 2.52
180 181 9.878667 TTTGTATTTGATAGGATCTTGTAACGA 57.121 29.630 0.00 0.00 0.00 3.85
181 182 9.529325 TTGTATTTGATAGGATCTTGTAACGAG 57.471 33.333 0.00 0.00 0.00 4.18
182 183 8.909923 TGTATTTGATAGGATCTTGTAACGAGA 58.090 33.333 0.00 0.00 0.00 4.04
183 184 9.745880 GTATTTGATAGGATCTTGTAACGAGAA 57.254 33.333 0.00 0.00 0.00 2.87
185 186 9.667107 ATTTGATAGGATCTTGTAACGAGAAAA 57.333 29.630 0.00 0.00 0.00 2.29
186 187 9.496873 TTTGATAGGATCTTGTAACGAGAAAAA 57.503 29.630 0.00 0.00 0.00 1.94
205 206 4.712122 AAAACCTTCGAAGCAAGAAACA 57.288 36.364 19.99 0.00 0.00 2.83
206 207 3.971032 AACCTTCGAAGCAAGAAACAG 57.029 42.857 19.99 5.26 0.00 3.16
207 208 2.222027 ACCTTCGAAGCAAGAAACAGG 58.778 47.619 19.99 5.26 0.00 4.00
208 209 2.158813 ACCTTCGAAGCAAGAAACAGGA 60.159 45.455 19.99 0.00 0.00 3.86
209 210 2.878406 CCTTCGAAGCAAGAAACAGGAA 59.122 45.455 19.99 0.00 0.00 3.36
210 211 3.315191 CCTTCGAAGCAAGAAACAGGAAA 59.685 43.478 19.99 0.00 0.00 3.13
211 212 3.963383 TCGAAGCAAGAAACAGGAAAC 57.037 42.857 0.00 0.00 0.00 2.78
212 213 3.275143 TCGAAGCAAGAAACAGGAAACA 58.725 40.909 0.00 0.00 0.00 2.83
213 214 3.692101 TCGAAGCAAGAAACAGGAAACAA 59.308 39.130 0.00 0.00 0.00 2.83
214 215 4.156922 TCGAAGCAAGAAACAGGAAACAAA 59.843 37.500 0.00 0.00 0.00 2.83
215 216 4.862018 CGAAGCAAGAAACAGGAAACAAAA 59.138 37.500 0.00 0.00 0.00 2.44
216 217 5.347364 CGAAGCAAGAAACAGGAAACAAAAA 59.653 36.000 0.00 0.00 0.00 1.94
217 218 6.454186 CGAAGCAAGAAACAGGAAACAAAAAG 60.454 38.462 0.00 0.00 0.00 2.27
218 219 4.631377 AGCAAGAAACAGGAAACAAAAAGC 59.369 37.500 0.00 0.00 0.00 3.51
219 220 4.631377 GCAAGAAACAGGAAACAAAAAGCT 59.369 37.500 0.00 0.00 0.00 3.74
220 221 5.122239 GCAAGAAACAGGAAACAAAAAGCTT 59.878 36.000 0.00 0.00 0.00 3.74
221 222 6.536688 CAAGAAACAGGAAACAAAAAGCTTG 58.463 36.000 0.00 0.00 0.00 4.01
222 223 6.036577 AGAAACAGGAAACAAAAAGCTTGA 57.963 33.333 0.00 0.00 0.00 3.02
223 224 6.643388 AGAAACAGGAAACAAAAAGCTTGAT 58.357 32.000 0.00 0.00 0.00 2.57
224 225 7.781056 AGAAACAGGAAACAAAAAGCTTGATA 58.219 30.769 0.00 0.00 0.00 2.15
225 226 7.922811 AGAAACAGGAAACAAAAAGCTTGATAG 59.077 33.333 0.00 0.00 0.00 2.08
226 227 6.715347 ACAGGAAACAAAAAGCTTGATAGT 57.285 33.333 0.00 0.00 0.00 2.12
227 228 7.817418 ACAGGAAACAAAAAGCTTGATAGTA 57.183 32.000 0.00 0.00 0.00 1.82
228 229 8.409358 ACAGGAAACAAAAAGCTTGATAGTAT 57.591 30.769 0.00 0.00 0.00 2.12
229 230 8.860088 ACAGGAAACAAAAAGCTTGATAGTATT 58.140 29.630 0.00 0.00 0.00 1.89
230 231 9.132521 CAGGAAACAAAAAGCTTGATAGTATTG 57.867 33.333 0.00 0.34 0.00 1.90
231 232 8.860088 AGGAAACAAAAAGCTTGATAGTATTGT 58.140 29.630 0.00 0.95 0.00 2.71
236 237 8.947115 ACAAAAAGCTTGATAGTATTGTACTCC 58.053 33.333 0.00 0.00 40.14 3.85
237 238 8.398665 CAAAAAGCTTGATAGTATTGTACTCCC 58.601 37.037 0.00 0.00 40.14 4.30
238 239 7.439108 AAAGCTTGATAGTATTGTACTCCCT 57.561 36.000 0.00 0.00 40.14 4.20
239 240 6.658188 AGCTTGATAGTATTGTACTCCCTC 57.342 41.667 0.00 0.00 40.14 4.30
240 241 6.377912 AGCTTGATAGTATTGTACTCCCTCT 58.622 40.000 0.00 0.00 40.14 3.69
241 242 6.266558 AGCTTGATAGTATTGTACTCCCTCTG 59.733 42.308 0.00 0.00 40.14 3.35
242 243 6.041069 GCTTGATAGTATTGTACTCCCTCTGT 59.959 42.308 0.00 0.00 40.14 3.41
243 244 7.584122 TTGATAGTATTGTACTCCCTCTGTC 57.416 40.000 0.00 0.00 40.14 3.51
244 245 6.069331 TGATAGTATTGTACTCCCTCTGTCC 58.931 44.000 0.00 0.00 40.14 4.02
245 246 3.644335 AGTATTGTACTCCCTCTGTCCC 58.356 50.000 0.00 0.00 32.47 4.46
246 247 2.642171 ATTGTACTCCCTCTGTCCCA 57.358 50.000 0.00 0.00 0.00 4.37
247 248 2.642171 TTGTACTCCCTCTGTCCCAT 57.358 50.000 0.00 0.00 0.00 4.00
248 249 3.769189 TTGTACTCCCTCTGTCCCATA 57.231 47.619 0.00 0.00 0.00 2.74
249 250 3.769189 TGTACTCCCTCTGTCCCATAA 57.231 47.619 0.00 0.00 0.00 1.90
250 251 4.280789 TGTACTCCCTCTGTCCCATAAT 57.719 45.455 0.00 0.00 0.00 1.28
251 252 5.412617 TGTACTCCCTCTGTCCCATAATA 57.587 43.478 0.00 0.00 0.00 0.98
252 253 5.977533 TGTACTCCCTCTGTCCCATAATAT 58.022 41.667 0.00 0.00 0.00 1.28
253 254 7.111136 TGTACTCCCTCTGTCCCATAATATA 57.889 40.000 0.00 0.00 0.00 0.86
254 255 7.541074 TGTACTCCCTCTGTCCCATAATATAA 58.459 38.462 0.00 0.00 0.00 0.98
255 256 7.674348 TGTACTCCCTCTGTCCCATAATATAAG 59.326 40.741 0.00 0.00 0.00 1.73
256 257 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
257 258 7.491681 ACTCCCTCTGTCCCATAATATAAGAT 58.508 38.462 0.00 0.00 0.00 2.40
258 259 7.401493 ACTCCCTCTGTCCCATAATATAAGATG 59.599 40.741 0.00 0.00 0.00 2.90
259 260 7.256399 TCCCTCTGTCCCATAATATAAGATGT 58.744 38.462 0.00 0.00 0.00 3.06
260 261 7.739444 TCCCTCTGTCCCATAATATAAGATGTT 59.261 37.037 0.00 0.00 0.00 2.71
261 262 8.386264 CCCTCTGTCCCATAATATAAGATGTTT 58.614 37.037 0.00 0.00 0.00 2.83
262 263 9.799106 CCTCTGTCCCATAATATAAGATGTTTT 57.201 33.333 0.00 0.00 0.00 2.43
265 266 9.683069 CTGTCCCATAATATAAGATGTTTTTGC 57.317 33.333 0.00 0.00 0.00 3.68
266 267 9.194972 TGTCCCATAATATAAGATGTTTTTGCA 57.805 29.630 0.00 0.00 0.00 4.08
269 270 8.981647 CCCATAATATAAGATGTTTTTGCAAGC 58.018 33.333 0.00 0.00 0.00 4.01
270 271 9.754382 CCATAATATAAGATGTTTTTGCAAGCT 57.246 29.630 0.00 0.00 0.00 3.74
277 278 9.846248 ATAAGATGTTTTTGCAAGCTAAACTAG 57.154 29.630 20.28 0.00 33.92 2.57
292 293 4.632538 AAACTAGCTTGCAAAAACGTCT 57.367 36.364 0.00 0.00 0.00 4.18
293 294 4.632538 AACTAGCTTGCAAAAACGTCTT 57.367 36.364 0.00 0.00 0.00 3.01
294 295 5.744666 AACTAGCTTGCAAAAACGTCTTA 57.255 34.783 0.00 0.00 0.00 2.10
295 296 5.091910 ACTAGCTTGCAAAAACGTCTTAC 57.908 39.130 0.00 0.00 0.00 2.34
296 297 4.573201 ACTAGCTTGCAAAAACGTCTTACA 59.427 37.500 0.00 0.00 0.00 2.41
297 298 4.568152 AGCTTGCAAAAACGTCTTACAT 57.432 36.364 0.00 0.00 0.00 2.29
298 299 4.932146 AGCTTGCAAAAACGTCTTACATT 58.068 34.783 0.00 0.00 0.00 2.71
299 300 4.739716 AGCTTGCAAAAACGTCTTACATTG 59.260 37.500 0.00 0.00 0.00 2.82
300 301 4.502645 GCTTGCAAAAACGTCTTACATTGT 59.497 37.500 0.00 0.00 0.00 2.71
301 302 5.554324 GCTTGCAAAAACGTCTTACATTGTG 60.554 40.000 0.00 0.00 0.00 3.33
302 303 4.355437 TGCAAAAACGTCTTACATTGTGG 58.645 39.130 0.00 0.00 0.00 4.17
303 304 3.733727 GCAAAAACGTCTTACATTGTGGG 59.266 43.478 0.00 0.00 0.00 4.61
304 305 4.498345 GCAAAAACGTCTTACATTGTGGGA 60.498 41.667 0.00 0.00 0.00 4.37
305 306 4.823790 AAAACGTCTTACATTGTGGGAC 57.176 40.909 0.00 6.72 0.00 4.46
307 308 1.355971 CGTCTTACATTGTGGGACGG 58.644 55.000 24.96 14.26 43.69 4.79
308 309 1.067425 CGTCTTACATTGTGGGACGGA 60.067 52.381 24.96 5.37 43.69 4.69
309 310 2.618053 GTCTTACATTGTGGGACGGAG 58.382 52.381 0.00 0.00 0.00 4.63
310 311 1.553248 TCTTACATTGTGGGACGGAGG 59.447 52.381 0.00 0.00 0.00 4.30
311 312 0.616371 TTACATTGTGGGACGGAGGG 59.384 55.000 0.00 0.00 0.00 4.30
312 313 0.252330 TACATTGTGGGACGGAGGGA 60.252 55.000 0.00 0.00 0.00 4.20
313 314 1.221840 CATTGTGGGACGGAGGGAG 59.778 63.158 0.00 0.00 0.00 4.30
314 315 1.229529 ATTGTGGGACGGAGGGAGT 60.230 57.895 0.00 0.00 0.00 3.85
315 316 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
316 317 0.901580 TTGTGGGACGGAGGGAGTAC 60.902 60.000 0.00 0.00 0.00 2.73
317 318 1.000107 GTGGGACGGAGGGAGTACT 60.000 63.158 0.00 0.00 0.00 2.73
318 319 0.257039 GTGGGACGGAGGGAGTACTA 59.743 60.000 0.00 0.00 0.00 1.82
319 320 1.133544 GTGGGACGGAGGGAGTACTAT 60.134 57.143 0.00 0.00 0.00 2.12
320 321 1.572415 TGGGACGGAGGGAGTACTATT 59.428 52.381 0.00 0.00 0.00 1.73
321 322 2.023695 TGGGACGGAGGGAGTACTATTT 60.024 50.000 0.00 0.00 0.00 1.40
322 323 3.036819 GGGACGGAGGGAGTACTATTTT 58.963 50.000 0.00 0.00 0.00 1.82
323 324 4.218312 GGGACGGAGGGAGTACTATTTTA 58.782 47.826 0.00 0.00 0.00 1.52
324 325 4.837298 GGGACGGAGGGAGTACTATTTTAT 59.163 45.833 0.00 0.00 0.00 1.40
325 326 5.047448 GGGACGGAGGGAGTACTATTTTATC 60.047 48.000 0.00 0.00 0.00 1.75
326 327 5.774184 GGACGGAGGGAGTACTATTTTATCT 59.226 44.000 0.00 0.00 0.00 1.98
327 328 6.072008 GGACGGAGGGAGTACTATTTTATCTC 60.072 46.154 0.00 0.00 0.00 2.75
328 329 6.371278 ACGGAGGGAGTACTATTTTATCTCA 58.629 40.000 0.00 0.00 0.00 3.27
329 330 6.264970 ACGGAGGGAGTACTATTTTATCTCAC 59.735 42.308 0.00 0.00 0.00 3.51
330 331 6.490721 CGGAGGGAGTACTATTTTATCTCACT 59.509 42.308 0.00 0.00 40.88 3.41
331 332 7.522399 CGGAGGGAGTACTATTTTATCTCACTG 60.522 44.444 0.00 0.00 38.73 3.66
332 333 7.256012 GGAGGGAGTACTATTTTATCTCACTGG 60.256 44.444 0.00 0.00 38.73 4.00
333 334 7.363031 AGGGAGTACTATTTTATCTCACTGGA 58.637 38.462 0.00 0.00 37.48 3.86
334 335 7.844779 AGGGAGTACTATTTTATCTCACTGGAA 59.155 37.037 0.00 0.00 37.48 3.53
335 336 8.483758 GGGAGTACTATTTTATCTCACTGGAAA 58.516 37.037 0.00 0.00 0.00 3.13
336 337 9.886132 GGAGTACTATTTTATCTCACTGGAAAA 57.114 33.333 0.00 0.00 0.00 2.29
348 349 8.723942 ATCTCACTGGAAAATTATGTGTACTC 57.276 34.615 0.00 0.00 0.00 2.59
349 350 7.676004 TCTCACTGGAAAATTATGTGTACTCA 58.324 34.615 0.00 0.00 0.00 3.41
350 351 8.321353 TCTCACTGGAAAATTATGTGTACTCAT 58.679 33.333 14.38 14.38 0.00 2.90
351 352 8.862325 TCACTGGAAAATTATGTGTACTCATT 57.138 30.769 15.09 0.00 0.00 2.57
352 353 9.952030 TCACTGGAAAATTATGTGTACTCATTA 57.048 29.630 15.09 7.35 0.00 1.90
361 362 8.880878 ATTATGTGTACTCATTAATACGTGCA 57.119 30.769 15.09 3.91 0.00 4.57
362 363 8.880878 TTATGTGTACTCATTAATACGTGCAT 57.119 30.769 15.09 8.17 0.00 3.96
363 364 7.786178 ATGTGTACTCATTAATACGTGCATT 57.214 32.000 4.59 0.00 0.00 3.56
364 365 7.603963 TGTGTACTCATTAATACGTGCATTT 57.396 32.000 0.00 0.00 0.00 2.32
365 366 7.460296 TGTGTACTCATTAATACGTGCATTTG 58.540 34.615 0.00 0.00 0.00 2.32
366 367 6.410914 GTGTACTCATTAATACGTGCATTTGC 59.589 38.462 0.00 0.00 42.50 3.68
377 378 3.967734 GCATTTGCACGTACACGAT 57.032 47.368 9.04 0.00 43.39 3.73
378 379 2.241259 GCATTTGCACGTACACGATT 57.759 45.000 9.04 0.00 43.39 3.34
379 380 3.377434 GCATTTGCACGTACACGATTA 57.623 42.857 9.04 0.00 43.39 1.75
380 381 3.088552 GCATTTGCACGTACACGATTAC 58.911 45.455 9.04 0.00 43.39 1.89
381 382 3.181524 GCATTTGCACGTACACGATTACT 60.182 43.478 9.04 0.00 43.39 2.24
382 383 4.031991 GCATTTGCACGTACACGATTACTA 59.968 41.667 9.04 0.00 43.39 1.82
383 384 5.714272 CATTTGCACGTACACGATTACTAG 58.286 41.667 9.04 0.00 43.02 2.57
460 461 3.138304 GGTTTGTTGCAAAGGAAATCCC 58.862 45.455 0.00 0.00 36.42 3.85
502 503 5.403166 TCTTTGACACCGTTATGTTCTTACG 59.597 40.000 0.00 0.00 31.24 3.18
573 574 2.961741 TGTTGGGCTCAAAACAATAGCA 59.038 40.909 0.00 0.00 38.01 3.49
671 704 2.288666 GATGGTGCTCGGCTCAATAAA 58.711 47.619 0.00 0.00 0.00 1.40
672 705 2.418368 TGGTGCTCGGCTCAATAAAT 57.582 45.000 0.00 0.00 0.00 1.40
675 708 4.265893 TGGTGCTCGGCTCAATAAATAAA 58.734 39.130 0.00 0.00 0.00 1.40
676 709 4.335315 TGGTGCTCGGCTCAATAAATAAAG 59.665 41.667 0.00 0.00 0.00 1.85
677 710 4.574828 GGTGCTCGGCTCAATAAATAAAGA 59.425 41.667 0.00 0.00 0.00 2.52
679 712 6.404293 GGTGCTCGGCTCAATAAATAAAGAAA 60.404 38.462 0.00 0.00 0.00 2.52
680 713 7.027161 GTGCTCGGCTCAATAAATAAAGAAAA 58.973 34.615 0.00 0.00 0.00 2.29
778 824 2.515523 CAGGCCAGCGATCCAAGG 60.516 66.667 5.01 0.00 0.00 3.61
837 891 1.339097 GCATCCTACGGTCCTACCAT 58.661 55.000 0.00 0.00 38.47 3.55
1026 1110 3.775654 AAGGCGGCGGAGAAGGAG 61.776 66.667 9.78 0.00 0.00 3.69
1140 1242 2.264794 GAGAAGAAGCCCGCGGAA 59.735 61.111 30.73 0.00 0.00 4.30
1174 1276 2.997897 AGAAGGCGGCCGAGAAGT 60.998 61.111 33.48 8.33 0.00 3.01
1450 1552 0.949105 CGCCCGCTACAACAAGAAGT 60.949 55.000 0.00 0.00 0.00 3.01
1517 1619 2.179517 CGGCAGTCTCTCCACGAC 59.820 66.667 0.00 0.00 0.00 4.34
1525 1627 0.539669 TCTCTCCACGACTGCCTTCA 60.540 55.000 0.00 0.00 0.00 3.02
1528 1630 1.151668 CTCCACGACTGCCTTCAAAG 58.848 55.000 0.00 0.00 0.00 2.77
1529 1631 0.884704 TCCACGACTGCCTTCAAAGC 60.885 55.000 0.00 0.00 0.00 3.51
1619 1721 5.359576 AGTTGTTGACTTTGGTTATCTGCAA 59.640 36.000 0.00 0.00 33.92 4.08
1621 1723 4.229876 GTTGACTTTGGTTATCTGCAAGC 58.770 43.478 0.00 0.00 0.00 4.01
1622 1724 3.485394 TGACTTTGGTTATCTGCAAGCA 58.515 40.909 0.00 0.00 34.28 3.91
1623 1725 4.081406 TGACTTTGGTTATCTGCAAGCAT 58.919 39.130 0.00 0.00 35.95 3.79
1624 1726 4.082625 TGACTTTGGTTATCTGCAAGCATG 60.083 41.667 0.00 0.00 35.95 4.06
1625 1727 3.828451 ACTTTGGTTATCTGCAAGCATGT 59.172 39.130 0.00 0.00 35.95 3.21
1626 1728 4.082571 ACTTTGGTTATCTGCAAGCATGTC 60.083 41.667 0.00 0.00 35.95 3.06
1668 1770 0.317854 GAAGTTGCTGAACGGTTGCC 60.318 55.000 0.00 0.00 37.15 4.52
1669 1771 0.751643 AAGTTGCTGAACGGTTGCCT 60.752 50.000 0.00 0.00 37.15 4.75
1670 1772 0.107831 AGTTGCTGAACGGTTGCCTA 59.892 50.000 0.00 0.00 37.15 3.93
1713 1815 1.950484 GCCGTCACCAAATCCACATCT 60.950 52.381 0.00 0.00 0.00 2.90
1744 1846 5.149273 TCGTGTTCGTAGTAGAAATGTGTC 58.851 41.667 0.00 0.00 38.33 3.67
1773 1875 6.459161 GGTTCTGTTACTTTAGTGGTTGTTGG 60.459 42.308 0.00 0.00 0.00 3.77
1780 1882 1.136828 TAGTGGTTGTTGGCTCTGGT 58.863 50.000 0.00 0.00 0.00 4.00
1792 1894 2.040278 TGGCTCTGGTTATCTGCAAGTT 59.960 45.455 0.00 0.00 33.76 2.66
1802 1904 6.017440 TGGTTATCTGCAAGTTGTTGAAGTAC 60.017 38.462 4.48 0.00 40.05 2.73
1814 1917 7.789026 AGTTGTTGAAGTACTAGTTACTGGTT 58.211 34.615 6.70 0.00 40.44 3.67
2007 2126 5.263968 AGGTTGATGATCAGTAGGTTACG 57.736 43.478 0.09 0.00 0.00 3.18
2008 2127 3.802685 GGTTGATGATCAGTAGGTTACGC 59.197 47.826 0.09 0.00 0.00 4.42
2009 2128 4.441634 GGTTGATGATCAGTAGGTTACGCT 60.442 45.833 0.09 0.00 0.00 5.07
2010 2129 5.109903 GTTGATGATCAGTAGGTTACGCTT 58.890 41.667 0.09 0.00 0.00 4.68
2011 2130 4.933330 TGATGATCAGTAGGTTACGCTTC 58.067 43.478 0.09 0.00 0.00 3.86
2019 2152 4.267928 CAGTAGGTTACGCTTCTGCATTAC 59.732 45.833 0.00 0.00 39.64 1.89
2034 2167 1.876799 CATTACGCACAGAACCAACCA 59.123 47.619 0.00 0.00 0.00 3.67
2158 2299 9.249053 TGGCTAATTGGATGTAACTGAATTTTA 57.751 29.630 0.00 0.00 0.00 1.52
2247 2392 0.892755 CGACAGTTACTAGGTGGCCA 59.107 55.000 0.00 0.00 0.00 5.36
2272 2417 4.756642 CCTAATCTGAAAAGTGAGTGTGCA 59.243 41.667 0.00 0.00 0.00 4.57
2282 2427 6.545504 AAAGTGAGTGTGCATTGTAGTAAG 57.454 37.500 0.00 0.00 0.00 2.34
2283 2428 5.468540 AGTGAGTGTGCATTGTAGTAAGA 57.531 39.130 0.00 0.00 0.00 2.10
2284 2429 5.853936 AGTGAGTGTGCATTGTAGTAAGAA 58.146 37.500 0.00 0.00 0.00 2.52
2285 2430 6.288294 AGTGAGTGTGCATTGTAGTAAGAAA 58.712 36.000 0.00 0.00 0.00 2.52
2286 2431 6.765989 AGTGAGTGTGCATTGTAGTAAGAAAA 59.234 34.615 0.00 0.00 0.00 2.29
2287 2432 7.282224 AGTGAGTGTGCATTGTAGTAAGAAAAA 59.718 33.333 0.00 0.00 0.00 1.94
2308 2453 7.949690 AAAAAGTATAGATAACCCCCACAAC 57.050 36.000 0.00 0.00 0.00 3.32
2309 2454 6.903340 AAAGTATAGATAACCCCCACAACT 57.097 37.500 0.00 0.00 0.00 3.16
2310 2455 8.396619 AAAAGTATAGATAACCCCCACAACTA 57.603 34.615 0.00 0.00 0.00 2.24
2311 2456 8.577164 AAAGTATAGATAACCCCCACAACTAT 57.423 34.615 0.00 0.00 0.00 2.12
2312 2457 8.577164 AAGTATAGATAACCCCCACAACTATT 57.423 34.615 0.00 0.00 0.00 1.73
2313 2458 8.203681 AGTATAGATAACCCCCACAACTATTC 57.796 38.462 0.00 0.00 0.00 1.75
2314 2459 4.790718 AGATAACCCCCACAACTATTCC 57.209 45.455 0.00 0.00 0.00 3.01
2315 2460 4.116113 AGATAACCCCCACAACTATTCCA 58.884 43.478 0.00 0.00 0.00 3.53
2316 2461 4.731929 AGATAACCCCCACAACTATTCCAT 59.268 41.667 0.00 0.00 0.00 3.41
2317 2462 3.845109 AACCCCCACAACTATTCCATT 57.155 42.857 0.00 0.00 0.00 3.16
2318 2463 3.845109 ACCCCCACAACTATTCCATTT 57.155 42.857 0.00 0.00 0.00 2.32
2319 2464 3.440127 ACCCCCACAACTATTCCATTTG 58.560 45.455 0.00 0.00 0.00 2.32
2320 2465 2.765699 CCCCCACAACTATTCCATTTGG 59.234 50.000 0.00 0.00 0.00 3.28
2321 2466 3.565449 CCCCCACAACTATTCCATTTGGA 60.565 47.826 0.00 0.00 43.73 3.53
2322 2467 4.289245 CCCCACAACTATTCCATTTGGAT 58.711 43.478 0.00 0.00 44.98 3.41
2323 2468 4.342092 CCCCACAACTATTCCATTTGGATC 59.658 45.833 0.00 0.00 44.98 3.36
2324 2469 4.955450 CCCACAACTATTCCATTTGGATCA 59.045 41.667 0.00 0.00 44.98 2.92
2325 2470 5.163519 CCCACAACTATTCCATTTGGATCAC 60.164 44.000 0.00 0.00 44.98 3.06
2326 2471 5.418524 CCACAACTATTCCATTTGGATCACA 59.581 40.000 0.00 0.00 44.98 3.58
2327 2472 6.097270 CCACAACTATTCCATTTGGATCACAT 59.903 38.462 0.00 0.00 44.98 3.21
2328 2473 7.285172 CCACAACTATTCCATTTGGATCACATA 59.715 37.037 0.00 0.00 44.98 2.29
2329 2474 8.685427 CACAACTATTCCATTTGGATCACATAA 58.315 33.333 0.00 0.00 44.98 1.90
2330 2475 8.686334 ACAACTATTCCATTTGGATCACATAAC 58.314 33.333 0.00 0.00 44.98 1.89
2331 2476 7.823745 ACTATTCCATTTGGATCACATAACC 57.176 36.000 0.00 0.00 44.98 2.85
2332 2477 6.777580 ACTATTCCATTTGGATCACATAACCC 59.222 38.462 0.00 0.00 44.98 4.11
2333 2478 3.909732 TCCATTTGGATCACATAACCCC 58.090 45.455 0.00 0.00 39.78 4.95
2334 2479 2.965147 CCATTTGGATCACATAACCCCC 59.035 50.000 0.00 0.00 37.39 5.40
2335 2480 3.374098 CCATTTGGATCACATAACCCCCT 60.374 47.826 0.00 0.00 37.39 4.79
2336 2481 3.662759 TTTGGATCACATAACCCCCTC 57.337 47.619 0.00 0.00 0.00 4.30
2337 2482 2.278657 TGGATCACATAACCCCCTCA 57.721 50.000 0.00 0.00 0.00 3.86
2338 2483 2.787956 TGGATCACATAACCCCCTCAT 58.212 47.619 0.00 0.00 0.00 2.90
2339 2484 2.711009 TGGATCACATAACCCCCTCATC 59.289 50.000 0.00 0.00 0.00 2.92
2340 2485 2.982488 GGATCACATAACCCCCTCATCT 59.018 50.000 0.00 0.00 0.00 2.90
2341 2486 3.395941 GGATCACATAACCCCCTCATCTT 59.604 47.826 0.00 0.00 0.00 2.40
2342 2487 4.141158 GGATCACATAACCCCCTCATCTTT 60.141 45.833 0.00 0.00 0.00 2.52
2343 2488 5.073144 GGATCACATAACCCCCTCATCTTTA 59.927 44.000 0.00 0.00 0.00 1.85
2344 2489 6.410388 GGATCACATAACCCCCTCATCTTTAA 60.410 42.308 0.00 0.00 0.00 1.52
2345 2490 6.395780 TCACATAACCCCCTCATCTTTAAA 57.604 37.500 0.00 0.00 0.00 1.52
2346 2491 6.795590 TCACATAACCCCCTCATCTTTAAAA 58.204 36.000 0.00 0.00 0.00 1.52
2347 2492 6.661805 TCACATAACCCCCTCATCTTTAAAAC 59.338 38.462 0.00 0.00 0.00 2.43
2348 2493 6.435904 CACATAACCCCCTCATCTTTAAAACA 59.564 38.462 0.00 0.00 0.00 2.83
2349 2494 6.663523 ACATAACCCCCTCATCTTTAAAACAG 59.336 38.462 0.00 0.00 0.00 3.16
2350 2495 4.047627 ACCCCCTCATCTTTAAAACAGG 57.952 45.455 0.00 0.00 0.00 4.00
2351 2496 3.245622 ACCCCCTCATCTTTAAAACAGGG 60.246 47.826 11.22 11.22 40.46 4.45
2352 2497 3.245622 CCCCCTCATCTTTAAAACAGGGT 60.246 47.826 14.81 0.00 39.29 4.34
2353 2498 4.416516 CCCCTCATCTTTAAAACAGGGTT 58.583 43.478 14.81 0.00 39.29 4.11
2354 2499 4.462834 CCCCTCATCTTTAAAACAGGGTTC 59.537 45.833 14.81 0.00 39.29 3.62
2355 2500 5.325239 CCCTCATCTTTAAAACAGGGTTCT 58.675 41.667 10.41 0.00 36.55 3.01
2356 2501 5.775195 CCCTCATCTTTAAAACAGGGTTCTT 59.225 40.000 10.41 0.00 36.55 2.52
2357 2502 6.946009 CCCTCATCTTTAAAACAGGGTTCTTA 59.054 38.462 10.41 0.00 36.55 2.10
2358 2503 7.450323 CCCTCATCTTTAAAACAGGGTTCTTAA 59.550 37.037 10.41 0.00 36.55 1.85
2359 2504 9.025041 CCTCATCTTTAAAACAGGGTTCTTAAT 57.975 33.333 0.00 0.00 0.00 1.40
2361 2506 9.020731 TCATCTTTAAAACAGGGTTCTTAATCC 57.979 33.333 0.00 0.00 0.00 3.01
2362 2507 7.770366 TCTTTAAAACAGGGTTCTTAATCCC 57.230 36.000 0.00 0.00 43.71 3.85
2363 2508 6.722590 TCTTTAAAACAGGGTTCTTAATCCCC 59.277 38.462 6.83 0.00 44.40 4.81
2371 2516 3.952323 GGGTTCTTAATCCCCTAAACTGC 59.048 47.826 0.00 0.00 37.89 4.40
2372 2517 3.952323 GGTTCTTAATCCCCTAAACTGCC 59.048 47.826 0.00 0.00 0.00 4.85
2373 2518 3.945640 TCTTAATCCCCTAAACTGCCC 57.054 47.619 0.00 0.00 0.00 5.36
2374 2519 2.512476 TCTTAATCCCCTAAACTGCCCC 59.488 50.000 0.00 0.00 0.00 5.80
2375 2520 1.988539 TAATCCCCTAAACTGCCCCA 58.011 50.000 0.00 0.00 0.00 4.96
2376 2521 1.089123 AATCCCCTAAACTGCCCCAA 58.911 50.000 0.00 0.00 0.00 4.12
2377 2522 1.089123 ATCCCCTAAACTGCCCCAAA 58.911 50.000 0.00 0.00 0.00 3.28
2378 2523 0.113580 TCCCCTAAACTGCCCCAAAC 59.886 55.000 0.00 0.00 0.00 2.93
2379 2524 0.902984 CCCCTAAACTGCCCCAAACC 60.903 60.000 0.00 0.00 0.00 3.27
2380 2525 1.248101 CCCTAAACTGCCCCAAACCG 61.248 60.000 0.00 0.00 0.00 4.44
2381 2526 1.248101 CCTAAACTGCCCCAAACCGG 61.248 60.000 0.00 0.00 0.00 5.28
2382 2527 0.250989 CTAAACTGCCCCAAACCGGA 60.251 55.000 9.46 0.00 36.56 5.14
2383 2528 0.537828 TAAACTGCCCCAAACCGGAC 60.538 55.000 9.46 0.00 36.56 4.79
2384 2529 2.575455 AAACTGCCCCAAACCGGACA 62.575 55.000 9.46 0.00 36.56 4.02
2385 2530 2.203422 CTGCCCCAAACCGGACAA 60.203 61.111 9.46 0.00 36.56 3.18
2386 2531 1.830408 CTGCCCCAAACCGGACAAA 60.830 57.895 9.46 0.00 36.56 2.83
2387 2532 1.152440 TGCCCCAAACCGGACAAAT 60.152 52.632 9.46 0.00 36.56 2.32
2388 2533 1.182385 TGCCCCAAACCGGACAAATC 61.182 55.000 9.46 0.00 36.56 2.17
2389 2534 1.182385 GCCCCAAACCGGACAAATCA 61.182 55.000 9.46 0.00 36.56 2.57
2390 2535 0.601057 CCCCAAACCGGACAAATCAC 59.399 55.000 9.46 0.00 36.56 3.06
2391 2536 0.601057 CCCAAACCGGACAAATCACC 59.399 55.000 9.46 0.00 36.56 4.02
2392 2537 0.601057 CCAAACCGGACAAATCACCC 59.399 55.000 9.46 0.00 36.56 4.61
2393 2538 0.601057 CAAACCGGACAAATCACCCC 59.399 55.000 9.46 0.00 0.00 4.95
2394 2539 0.541063 AAACCGGACAAATCACCCCC 60.541 55.000 9.46 0.00 0.00 5.40
2395 2540 1.432023 AACCGGACAAATCACCCCCT 61.432 55.000 9.46 0.00 0.00 4.79
2396 2541 0.548197 ACCGGACAAATCACCCCCTA 60.548 55.000 9.46 0.00 0.00 3.53
2397 2542 0.621609 CCGGACAAATCACCCCCTAA 59.378 55.000 0.00 0.00 0.00 2.69
2398 2543 1.680860 CCGGACAAATCACCCCCTAAC 60.681 57.143 0.00 0.00 0.00 2.34
2399 2544 1.680860 CGGACAAATCACCCCCTAACC 60.681 57.143 0.00 0.00 0.00 2.85
2400 2545 1.639108 GGACAAATCACCCCCTAACCT 59.361 52.381 0.00 0.00 0.00 3.50
2401 2546 2.042569 GGACAAATCACCCCCTAACCTT 59.957 50.000 0.00 0.00 0.00 3.50
2402 2547 3.353557 GACAAATCACCCCCTAACCTTC 58.646 50.000 0.00 0.00 0.00 3.46
2403 2548 2.719705 ACAAATCACCCCCTAACCTTCA 59.280 45.455 0.00 0.00 0.00 3.02
2404 2549 3.089284 CAAATCACCCCCTAACCTTCAC 58.911 50.000 0.00 0.00 0.00 3.18
2405 2550 2.361085 ATCACCCCCTAACCTTCACT 57.639 50.000 0.00 0.00 0.00 3.41
2406 2551 2.127651 TCACCCCCTAACCTTCACTT 57.872 50.000 0.00 0.00 0.00 3.16
2407 2552 2.424793 TCACCCCCTAACCTTCACTTT 58.575 47.619 0.00 0.00 0.00 2.66
2408 2553 3.600433 TCACCCCCTAACCTTCACTTTA 58.400 45.455 0.00 0.00 0.00 1.85
2409 2554 3.585732 TCACCCCCTAACCTTCACTTTAG 59.414 47.826 0.00 0.00 0.00 1.85
2410 2555 2.307980 ACCCCCTAACCTTCACTTTAGC 59.692 50.000 0.00 0.00 0.00 3.09
2411 2556 2.629051 CCCCTAACCTTCACTTTAGCG 58.371 52.381 0.00 0.00 0.00 4.26
2412 2557 2.629051 CCCTAACCTTCACTTTAGCGG 58.371 52.381 0.00 0.00 0.00 5.52
2413 2558 2.027469 CCCTAACCTTCACTTTAGCGGT 60.027 50.000 0.00 0.00 0.00 5.68
2414 2559 3.196254 CCCTAACCTTCACTTTAGCGGTA 59.804 47.826 0.00 0.00 0.00 4.02
2415 2560 4.141779 CCCTAACCTTCACTTTAGCGGTAT 60.142 45.833 0.00 0.00 0.00 2.73
2416 2561 4.809426 CCTAACCTTCACTTTAGCGGTATG 59.191 45.833 0.00 0.00 0.00 2.39
2417 2562 3.261981 ACCTTCACTTTAGCGGTATGG 57.738 47.619 0.00 0.00 0.00 2.74
2418 2563 2.093128 ACCTTCACTTTAGCGGTATGGG 60.093 50.000 0.00 0.00 0.00 4.00
2419 2564 2.169769 CCTTCACTTTAGCGGTATGGGA 59.830 50.000 0.00 0.00 0.00 4.37
2420 2565 2.973694 TCACTTTAGCGGTATGGGAC 57.026 50.000 0.00 0.00 0.00 4.46
2421 2566 1.135527 TCACTTTAGCGGTATGGGACG 59.864 52.381 0.00 0.00 0.00 4.79
2422 2567 0.462789 ACTTTAGCGGTATGGGACGG 59.537 55.000 0.00 0.00 0.00 4.79
2423 2568 0.462789 CTTTAGCGGTATGGGACGGT 59.537 55.000 0.00 0.00 43.70 4.83
2424 2569 0.176219 TTTAGCGGTATGGGACGGTG 59.824 55.000 0.00 0.00 41.27 4.94
2425 2570 1.678598 TTAGCGGTATGGGACGGTGG 61.679 60.000 0.00 0.00 41.27 4.61
2426 2571 2.859525 TAGCGGTATGGGACGGTGGT 62.860 60.000 0.00 0.00 41.27 4.16
2427 2572 2.983791 CGGTATGGGACGGTGGTT 59.016 61.111 0.00 0.00 0.00 3.67
2428 2573 1.297364 CGGTATGGGACGGTGGTTT 59.703 57.895 0.00 0.00 0.00 3.27
2429 2574 0.321830 CGGTATGGGACGGTGGTTTT 60.322 55.000 0.00 0.00 0.00 2.43
2430 2575 1.170442 GGTATGGGACGGTGGTTTTG 58.830 55.000 0.00 0.00 0.00 2.44
2431 2576 0.524414 GTATGGGACGGTGGTTTTGC 59.476 55.000 0.00 0.00 0.00 3.68
2432 2577 0.110678 TATGGGACGGTGGTTTTGCA 59.889 50.000 0.00 0.00 0.00 4.08
2433 2578 0.541764 ATGGGACGGTGGTTTTGCAT 60.542 50.000 0.00 0.00 0.00 3.96
2434 2579 0.110678 TGGGACGGTGGTTTTGCATA 59.889 50.000 0.00 0.00 0.00 3.14
2435 2580 0.524414 GGGACGGTGGTTTTGCATAC 59.476 55.000 0.00 0.00 0.00 2.39
2436 2581 0.167251 GGACGGTGGTTTTGCATACG 59.833 55.000 0.00 0.00 0.00 3.06
2437 2582 0.869730 GACGGTGGTTTTGCATACGT 59.130 50.000 0.00 0.00 35.64 3.57
2438 2583 0.589223 ACGGTGGTTTTGCATACGTG 59.411 50.000 0.00 0.00 0.00 4.49
2439 2584 0.109964 CGGTGGTTTTGCATACGTGG 60.110 55.000 0.00 0.00 0.00 4.94
2440 2585 0.388006 GGTGGTTTTGCATACGTGGC 60.388 55.000 0.00 2.08 0.00 5.01
2441 2586 0.727793 GTGGTTTTGCATACGTGGCG 60.728 55.000 0.00 0.00 0.00 5.69
2442 2587 1.167155 TGGTTTTGCATACGTGGCGT 61.167 50.000 0.00 0.00 44.35 5.68
2443 2588 0.453782 GGTTTTGCATACGTGGCGTC 60.454 55.000 0.00 0.00 41.54 5.19
2444 2589 0.515564 GTTTTGCATACGTGGCGTCT 59.484 50.000 0.00 0.00 41.54 4.18
2445 2590 0.515127 TTTTGCATACGTGGCGTCTG 59.485 50.000 0.00 0.00 41.54 3.51
2446 2591 1.295357 TTTGCATACGTGGCGTCTGG 61.295 55.000 0.00 0.00 41.54 3.86
2447 2592 3.564027 GCATACGTGGCGTCTGGC 61.564 66.667 0.00 3.60 41.54 4.85
2448 2593 2.184322 CATACGTGGCGTCTGGCT 59.816 61.111 0.00 0.00 41.54 4.75
2449 2594 1.447838 CATACGTGGCGTCTGGCTT 60.448 57.895 0.00 0.00 41.54 4.35
2450 2595 1.447838 ATACGTGGCGTCTGGCTTG 60.448 57.895 0.00 0.00 41.54 4.01
2451 2596 2.852495 ATACGTGGCGTCTGGCTTGG 62.852 60.000 0.00 0.00 41.54 3.61
2483 2628 4.742201 CACGTCGGACAGGGGCTG 62.742 72.222 9.10 0.00 37.52 4.85
2486 2631 4.767255 GTCGGACAGGGGCTGCTG 62.767 72.222 2.62 0.00 34.37 4.41
2490 2635 4.729918 GACAGGGGCTGCTGGGTG 62.730 72.222 0.00 0.00 34.37 4.61
2498 2643 2.662596 CTGCTGGGTGCGGTCTAA 59.337 61.111 0.00 0.00 46.63 2.10
2499 2644 1.003839 CTGCTGGGTGCGGTCTAAA 60.004 57.895 0.00 0.00 46.63 1.85
2500 2645 0.605319 CTGCTGGGTGCGGTCTAAAA 60.605 55.000 0.00 0.00 46.63 1.52
2501 2646 0.887387 TGCTGGGTGCGGTCTAAAAC 60.887 55.000 0.00 0.00 46.63 2.43
2502 2647 1.908066 GCTGGGTGCGGTCTAAAACG 61.908 60.000 0.00 0.00 0.00 3.60
2503 2648 0.320073 CTGGGTGCGGTCTAAAACGA 60.320 55.000 0.00 0.00 0.00 3.85
2504 2649 0.600782 TGGGTGCGGTCTAAAACGAC 60.601 55.000 0.00 0.00 0.00 4.34
2526 2671 4.323477 CCAGCCGGTTCGACCCAA 62.323 66.667 1.90 0.00 33.75 4.12
2527 2672 2.281208 CAGCCGGTTCGACCCAAA 60.281 61.111 1.90 0.00 33.75 3.28
2528 2673 1.674322 CAGCCGGTTCGACCCAAAT 60.674 57.895 1.90 0.00 33.75 2.32
2529 2674 1.376812 AGCCGGTTCGACCCAAATC 60.377 57.895 1.90 0.00 33.75 2.17
2530 2675 1.673009 GCCGGTTCGACCCAAATCA 60.673 57.895 1.90 0.00 33.75 2.57
2531 2676 1.644786 GCCGGTTCGACCCAAATCAG 61.645 60.000 1.90 0.00 33.75 2.90
2532 2677 1.644786 CCGGTTCGACCCAAATCAGC 61.645 60.000 0.00 0.00 33.75 4.26
2533 2678 1.644786 CGGTTCGACCCAAATCAGCC 61.645 60.000 0.00 0.00 33.75 4.85
2534 2679 1.644786 GGTTCGACCCAAATCAGCCG 61.645 60.000 0.00 0.00 30.04 5.52
2535 2680 2.038269 TTCGACCCAAATCAGCCGC 61.038 57.895 0.00 0.00 0.00 6.53
2536 2681 3.508840 CGACCCAAATCAGCCGCC 61.509 66.667 0.00 0.00 0.00 6.13
2537 2682 3.508840 GACCCAAATCAGCCGCCG 61.509 66.667 0.00 0.00 0.00 6.46
2552 2697 4.160635 CCGCCGCCGCTTTTGTAG 62.161 66.667 0.00 0.00 0.00 2.74
2553 2698 4.811761 CGCCGCCGCTTTTGTAGC 62.812 66.667 0.00 0.00 46.83 3.58
2565 2710 5.432885 GCTTTTGTAGCTTTTGTACTGGA 57.567 39.130 0.00 0.00 46.77 3.86
2566 2711 5.827666 GCTTTTGTAGCTTTTGTACTGGAA 58.172 37.500 0.00 0.00 46.77 3.53
2567 2712 5.685954 GCTTTTGTAGCTTTTGTACTGGAAC 59.314 40.000 0.00 0.00 46.77 3.62
2568 2713 5.412526 TTTGTAGCTTTTGTACTGGAACG 57.587 39.130 0.00 0.00 0.00 3.95
2569 2714 2.803956 TGTAGCTTTTGTACTGGAACGC 59.196 45.455 0.00 0.00 0.00 4.84
2570 2715 1.961793 AGCTTTTGTACTGGAACGCA 58.038 45.000 0.00 0.00 0.00 5.24
2571 2716 2.294074 AGCTTTTGTACTGGAACGCAA 58.706 42.857 0.00 0.00 0.00 4.85
2572 2717 2.884639 AGCTTTTGTACTGGAACGCAAT 59.115 40.909 0.00 0.00 0.00 3.56
2573 2718 2.979813 GCTTTTGTACTGGAACGCAATG 59.020 45.455 0.00 0.00 0.00 2.82
2574 2719 2.697431 TTTGTACTGGAACGCAATGC 57.303 45.000 0.00 0.00 0.00 3.56
2575 2720 1.890876 TTGTACTGGAACGCAATGCT 58.109 45.000 2.94 0.00 0.00 3.79
2576 2721 1.155889 TGTACTGGAACGCAATGCTG 58.844 50.000 2.94 0.00 0.00 4.41
2577 2722 1.156736 GTACTGGAACGCAATGCTGT 58.843 50.000 2.94 0.00 0.00 4.40
2578 2723 1.135972 GTACTGGAACGCAATGCTGTG 60.136 52.381 2.94 0.00 39.09 3.66
2580 2725 0.386352 CTGGAACGCAATGCTGTGTG 60.386 55.000 2.94 0.00 45.60 3.82
2581 2726 0.817229 TGGAACGCAATGCTGTGTGA 60.817 50.000 2.94 0.00 45.60 3.58
2582 2727 0.110056 GGAACGCAATGCTGTGTGAG 60.110 55.000 2.94 0.00 45.60 3.51
2583 2728 0.727122 GAACGCAATGCTGTGTGAGC 60.727 55.000 2.94 0.00 45.60 4.26
2592 2737 2.957576 GCTGTGTGAGCTTTGTACTG 57.042 50.000 0.00 0.00 45.21 2.74
2593 2738 2.483876 GCTGTGTGAGCTTTGTACTGA 58.516 47.619 0.00 0.00 45.21 3.41
2594 2739 3.070018 GCTGTGTGAGCTTTGTACTGAT 58.930 45.455 0.00 0.00 45.21 2.90
2595 2740 3.499918 GCTGTGTGAGCTTTGTACTGATT 59.500 43.478 0.00 0.00 45.21 2.57
2596 2741 4.023707 GCTGTGTGAGCTTTGTACTGATTT 60.024 41.667 0.00 0.00 45.21 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.814394 GCAGATGTTGATGAGTGGCAA 59.186 47.619 0.00 0.00 0.00 4.52
2 3 1.456296 TGCAGATGTTGATGAGTGGC 58.544 50.000 0.00 0.00 0.00 5.01
4 5 4.395231 AGATGTTGCAGATGTTGATGAGTG 59.605 41.667 0.00 0.00 0.00 3.51
6 7 4.909894 CAGATGTTGCAGATGTTGATGAG 58.090 43.478 0.00 0.00 0.00 2.90
7 8 4.957759 CAGATGTTGCAGATGTTGATGA 57.042 40.909 0.00 0.00 0.00 2.92
20 21 6.073058 AGTGTTTATATATGCCGCAGATGTTG 60.073 38.462 10.79 0.00 0.00 3.33
21 22 5.997746 AGTGTTTATATATGCCGCAGATGTT 59.002 36.000 10.79 1.16 0.00 2.71
22 23 5.551233 AGTGTTTATATATGCCGCAGATGT 58.449 37.500 10.79 6.61 0.00 3.06
23 24 6.147656 TCAAGTGTTTATATATGCCGCAGATG 59.852 38.462 10.79 0.00 0.00 2.90
24 25 6.230472 TCAAGTGTTTATATATGCCGCAGAT 58.770 36.000 5.69 5.69 0.00 2.90
25 26 5.606505 TCAAGTGTTTATATATGCCGCAGA 58.393 37.500 0.00 0.00 0.00 4.26
26 27 5.922739 TCAAGTGTTTATATATGCCGCAG 57.077 39.130 0.00 0.00 0.00 5.18
27 28 6.685527 TTTCAAGTGTTTATATATGCCGCA 57.314 33.333 0.00 0.00 0.00 5.69
28 29 9.840427 ATTATTTCAAGTGTTTATATATGCCGC 57.160 29.630 0.00 0.00 0.00 6.53
87 88 9.193133 CGTAGCTAAAAGTAATACATATGCAGT 57.807 33.333 1.58 0.00 0.00 4.40
109 110 1.927174 CTGTCGGAGGAAATTGCGTAG 59.073 52.381 0.00 0.00 33.36 3.51
110 111 2.004583 CTGTCGGAGGAAATTGCGTA 57.995 50.000 0.00 0.00 33.36 4.42
111 112 1.298859 GCTGTCGGAGGAAATTGCGT 61.299 55.000 0.00 0.00 33.36 5.24
112 113 1.425428 GCTGTCGGAGGAAATTGCG 59.575 57.895 0.00 0.00 0.00 4.85
113 114 0.960364 TGGCTGTCGGAGGAAATTGC 60.960 55.000 0.00 0.00 0.00 3.56
114 115 1.533625 TTGGCTGTCGGAGGAAATTG 58.466 50.000 0.00 0.00 0.00 2.32
115 116 2.162681 CTTTGGCTGTCGGAGGAAATT 58.837 47.619 0.00 0.00 0.00 1.82
116 117 1.614317 CCTTTGGCTGTCGGAGGAAAT 60.614 52.381 0.00 0.00 0.00 2.17
117 118 0.250727 CCTTTGGCTGTCGGAGGAAA 60.251 55.000 0.00 0.00 0.00 3.13
118 119 1.374947 CCTTTGGCTGTCGGAGGAA 59.625 57.895 0.00 0.00 0.00 3.36
119 120 1.415672 AACCTTTGGCTGTCGGAGGA 61.416 55.000 7.60 0.00 0.00 3.71
120 121 0.537371 AAACCTTTGGCTGTCGGAGG 60.537 55.000 0.00 0.00 0.00 4.30
121 122 0.593128 CAAACCTTTGGCTGTCGGAG 59.407 55.000 0.00 0.00 34.59 4.63
122 123 0.106918 ACAAACCTTTGGCTGTCGGA 60.107 50.000 2.94 0.00 42.34 4.55
123 124 0.310854 GACAAACCTTTGGCTGTCGG 59.689 55.000 2.94 0.00 42.91 4.79
124 125 3.845625 GACAAACCTTTGGCTGTCG 57.154 52.632 2.94 0.00 42.91 4.35
129 130 8.507524 AAGATACTAATAGACAAACCTTTGGC 57.492 34.615 0.00 0.00 46.60 4.52
154 155 9.878667 TCGTTACAAGATCCTATCAAATACAAA 57.121 29.630 0.00 0.00 0.00 2.83
155 156 9.529325 CTCGTTACAAGATCCTATCAAATACAA 57.471 33.333 0.00 0.00 0.00 2.41
156 157 8.909923 TCTCGTTACAAGATCCTATCAAATACA 58.090 33.333 0.00 0.00 0.00 2.29
157 158 9.745880 TTCTCGTTACAAGATCCTATCAAATAC 57.254 33.333 0.00 0.00 0.00 1.89
159 160 9.667107 TTTTCTCGTTACAAGATCCTATCAAAT 57.333 29.630 0.00 0.00 0.00 2.32
160 161 9.496873 TTTTTCTCGTTACAAGATCCTATCAAA 57.503 29.630 0.00 0.00 0.00 2.69
183 184 5.066968 TGTTTCTTGCTTCGAAGGTTTTT 57.933 34.783 25.77 0.00 0.00 1.94
184 185 4.440112 CCTGTTTCTTGCTTCGAAGGTTTT 60.440 41.667 25.77 0.00 0.00 2.43
185 186 3.066760 CCTGTTTCTTGCTTCGAAGGTTT 59.933 43.478 25.77 0.00 0.00 3.27
186 187 2.618709 CCTGTTTCTTGCTTCGAAGGTT 59.381 45.455 25.77 0.00 0.00 3.50
187 188 2.158813 TCCTGTTTCTTGCTTCGAAGGT 60.159 45.455 25.77 0.00 0.00 3.50
188 189 2.494059 TCCTGTTTCTTGCTTCGAAGG 58.506 47.619 25.77 10.20 0.00 3.46
189 190 4.201910 TGTTTCCTGTTTCTTGCTTCGAAG 60.202 41.667 21.02 21.02 0.00 3.79
190 191 3.692101 TGTTTCCTGTTTCTTGCTTCGAA 59.308 39.130 0.00 0.00 0.00 3.71
191 192 3.275143 TGTTTCCTGTTTCTTGCTTCGA 58.725 40.909 0.00 0.00 0.00 3.71
192 193 3.691049 TGTTTCCTGTTTCTTGCTTCG 57.309 42.857 0.00 0.00 0.00 3.79
193 194 6.673076 GCTTTTTGTTTCCTGTTTCTTGCTTC 60.673 38.462 0.00 0.00 0.00 3.86
194 195 5.122239 GCTTTTTGTTTCCTGTTTCTTGCTT 59.878 36.000 0.00 0.00 0.00 3.91
195 196 4.631377 GCTTTTTGTTTCCTGTTTCTTGCT 59.369 37.500 0.00 0.00 0.00 3.91
196 197 4.631377 AGCTTTTTGTTTCCTGTTTCTTGC 59.369 37.500 0.00 0.00 0.00 4.01
197 198 6.368516 TCAAGCTTTTTGTTTCCTGTTTCTTG 59.631 34.615 0.00 0.00 0.00 3.02
198 199 6.463360 TCAAGCTTTTTGTTTCCTGTTTCTT 58.537 32.000 0.00 0.00 0.00 2.52
199 200 6.036577 TCAAGCTTTTTGTTTCCTGTTTCT 57.963 33.333 0.00 0.00 0.00 2.52
200 201 6.908870 ATCAAGCTTTTTGTTTCCTGTTTC 57.091 33.333 0.00 0.00 0.00 2.78
201 202 7.555965 ACTATCAAGCTTTTTGTTTCCTGTTT 58.444 30.769 0.00 0.00 0.00 2.83
202 203 7.112452 ACTATCAAGCTTTTTGTTTCCTGTT 57.888 32.000 0.00 0.00 0.00 3.16
203 204 6.715347 ACTATCAAGCTTTTTGTTTCCTGT 57.285 33.333 0.00 0.00 0.00 4.00
204 205 9.132521 CAATACTATCAAGCTTTTTGTTTCCTG 57.867 33.333 0.00 0.00 0.00 3.86
205 206 8.860088 ACAATACTATCAAGCTTTTTGTTTCCT 58.140 29.630 0.00 0.00 0.00 3.36
210 211 8.947115 GGAGTACAATACTATCAAGCTTTTTGT 58.053 33.333 0.00 0.00 39.59 2.83
211 212 8.398665 GGGAGTACAATACTATCAAGCTTTTTG 58.601 37.037 0.00 0.00 39.59 2.44
212 213 8.329502 AGGGAGTACAATACTATCAAGCTTTTT 58.670 33.333 0.00 0.00 39.59 1.94
213 214 7.862675 AGGGAGTACAATACTATCAAGCTTTT 58.137 34.615 0.00 0.00 39.59 2.27
214 215 7.345914 AGAGGGAGTACAATACTATCAAGCTTT 59.654 37.037 0.00 0.00 39.59 3.51
215 216 6.841755 AGAGGGAGTACAATACTATCAAGCTT 59.158 38.462 0.00 0.00 39.59 3.74
216 217 6.266558 CAGAGGGAGTACAATACTATCAAGCT 59.733 42.308 0.00 0.00 39.59 3.74
217 218 6.041069 ACAGAGGGAGTACAATACTATCAAGC 59.959 42.308 0.00 0.00 39.59 4.01
218 219 7.255660 GGACAGAGGGAGTACAATACTATCAAG 60.256 44.444 0.00 0.00 39.59 3.02
219 220 6.550108 GGACAGAGGGAGTACAATACTATCAA 59.450 42.308 0.00 0.00 39.59 2.57
220 221 6.069331 GGACAGAGGGAGTACAATACTATCA 58.931 44.000 0.00 0.00 39.59 2.15
221 222 5.477637 GGGACAGAGGGAGTACAATACTATC 59.522 48.000 0.00 0.00 39.59 2.08
222 223 5.103215 TGGGACAGAGGGAGTACAATACTAT 60.103 44.000 0.00 0.00 39.59 2.12
223 224 4.231195 TGGGACAGAGGGAGTACAATACTA 59.769 45.833 0.00 0.00 39.59 1.82
224 225 3.012502 TGGGACAGAGGGAGTACAATACT 59.987 47.826 0.00 0.00 42.86 2.12
225 226 3.371965 TGGGACAGAGGGAGTACAATAC 58.628 50.000 0.00 0.00 0.00 1.89
226 227 3.769189 TGGGACAGAGGGAGTACAATA 57.231 47.619 0.00 0.00 0.00 1.90
227 228 2.642171 TGGGACAGAGGGAGTACAAT 57.358 50.000 0.00 0.00 0.00 2.71
243 244 8.981647 GCTTGCAAAAACATCTTATATTATGGG 58.018 33.333 0.00 0.00 0.00 4.00
244 245 9.754382 AGCTTGCAAAAACATCTTATATTATGG 57.246 29.630 0.00 0.00 0.00 2.74
251 252 9.846248 CTAGTTTAGCTTGCAAAAACATCTTAT 57.154 29.630 21.30 7.46 35.93 1.73
269 270 5.748592 AGACGTTTTTGCAAGCTAGTTTAG 58.251 37.500 0.00 0.00 0.00 1.85
270 271 5.744666 AGACGTTTTTGCAAGCTAGTTTA 57.255 34.783 0.00 0.00 0.00 2.01
271 272 4.632538 AGACGTTTTTGCAAGCTAGTTT 57.367 36.364 0.00 0.00 0.00 2.66
272 273 4.632538 AAGACGTTTTTGCAAGCTAGTT 57.367 36.364 0.00 0.00 0.00 2.24
273 274 4.573201 TGTAAGACGTTTTTGCAAGCTAGT 59.427 37.500 0.00 0.00 0.00 2.57
274 275 5.090652 TGTAAGACGTTTTTGCAAGCTAG 57.909 39.130 0.00 0.00 0.00 3.42
275 276 5.682943 ATGTAAGACGTTTTTGCAAGCTA 57.317 34.783 0.00 0.00 0.00 3.32
276 277 4.568152 ATGTAAGACGTTTTTGCAAGCT 57.432 36.364 0.00 0.00 0.00 3.74
277 278 4.502645 ACAATGTAAGACGTTTTTGCAAGC 59.497 37.500 0.00 0.00 0.00 4.01
278 279 5.051774 CCACAATGTAAGACGTTTTTGCAAG 60.052 40.000 0.00 2.28 0.00 4.01
279 280 4.800993 CCACAATGTAAGACGTTTTTGCAA 59.199 37.500 0.00 0.00 0.00 4.08
280 281 4.355437 CCACAATGTAAGACGTTTTTGCA 58.645 39.130 0.00 1.87 0.00 4.08
281 282 3.733727 CCCACAATGTAAGACGTTTTTGC 59.266 43.478 0.00 0.00 0.00 3.68
282 283 4.973663 GTCCCACAATGTAAGACGTTTTTG 59.026 41.667 0.00 0.00 0.00 2.44
283 284 4.260866 CGTCCCACAATGTAAGACGTTTTT 60.261 41.667 21.67 0.00 43.89 1.94
284 285 3.249080 CGTCCCACAATGTAAGACGTTTT 59.751 43.478 21.67 0.00 43.89 2.43
285 286 2.803956 CGTCCCACAATGTAAGACGTTT 59.196 45.455 21.67 0.00 43.89 3.60
286 287 2.409975 CGTCCCACAATGTAAGACGTT 58.590 47.619 21.67 0.00 43.89 3.99
287 288 1.337447 CCGTCCCACAATGTAAGACGT 60.337 52.381 25.28 0.00 46.62 4.34
289 290 2.618053 CTCCGTCCCACAATGTAAGAC 58.382 52.381 5.24 5.24 0.00 3.01
290 291 1.553248 CCTCCGTCCCACAATGTAAGA 59.447 52.381 0.00 0.00 0.00 2.10
291 292 1.406887 CCCTCCGTCCCACAATGTAAG 60.407 57.143 0.00 0.00 0.00 2.34
292 293 0.616371 CCCTCCGTCCCACAATGTAA 59.384 55.000 0.00 0.00 0.00 2.41
293 294 0.252330 TCCCTCCGTCCCACAATGTA 60.252 55.000 0.00 0.00 0.00 2.29
294 295 1.537889 TCCCTCCGTCCCACAATGT 60.538 57.895 0.00 0.00 0.00 2.71
295 296 1.221840 CTCCCTCCGTCCCACAATG 59.778 63.158 0.00 0.00 0.00 2.82
296 297 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
297 298 0.901580 GTACTCCCTCCGTCCCACAA 60.902 60.000 0.00 0.00 0.00 3.33
298 299 1.304713 GTACTCCCTCCGTCCCACA 60.305 63.158 0.00 0.00 0.00 4.17
299 300 0.257039 TAGTACTCCCTCCGTCCCAC 59.743 60.000 0.00 0.00 0.00 4.61
300 301 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
301 302 2.378378 AATAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
302 303 5.774184 AGATAAAATAGTACTCCCTCCGTCC 59.226 44.000 0.00 0.00 0.00 4.79
303 304 6.489361 TGAGATAAAATAGTACTCCCTCCGTC 59.511 42.308 0.00 0.00 0.00 4.79
304 305 6.264970 GTGAGATAAAATAGTACTCCCTCCGT 59.735 42.308 0.00 0.00 0.00 4.69
305 306 6.490721 AGTGAGATAAAATAGTACTCCCTCCG 59.509 42.308 0.00 0.00 0.00 4.63
306 307 7.256012 CCAGTGAGATAAAATAGTACTCCCTCC 60.256 44.444 0.00 0.00 0.00 4.30
307 308 7.506261 TCCAGTGAGATAAAATAGTACTCCCTC 59.494 40.741 0.00 0.00 0.00 4.30
308 309 7.363031 TCCAGTGAGATAAAATAGTACTCCCT 58.637 38.462 0.00 0.00 0.00 4.20
309 310 7.598759 TCCAGTGAGATAAAATAGTACTCCC 57.401 40.000 0.00 0.00 0.00 4.30
310 311 9.886132 TTTTCCAGTGAGATAAAATAGTACTCC 57.114 33.333 0.00 0.00 0.00 3.85
322 323 9.817809 GAGTACACATAATTTTCCAGTGAGATA 57.182 33.333 0.00 0.00 34.47 1.98
323 324 8.321353 TGAGTACACATAATTTTCCAGTGAGAT 58.679 33.333 0.00 0.00 34.47 2.75
324 325 7.676004 TGAGTACACATAATTTTCCAGTGAGA 58.324 34.615 0.00 0.00 34.47 3.27
325 326 7.905604 TGAGTACACATAATTTTCCAGTGAG 57.094 36.000 0.00 0.00 34.47 3.51
326 327 8.862325 AATGAGTACACATAATTTTCCAGTGA 57.138 30.769 6.20 0.00 34.47 3.41
335 336 9.320352 TGCACGTATTAATGAGTACACATAATT 57.680 29.630 6.20 0.00 0.00 1.40
336 337 8.880878 TGCACGTATTAATGAGTACACATAAT 57.119 30.769 6.20 8.91 0.00 1.28
337 338 8.880878 ATGCACGTATTAATGAGTACACATAA 57.119 30.769 6.20 2.75 0.00 1.90
338 339 8.880878 AATGCACGTATTAATGAGTACACATA 57.119 30.769 6.20 0.00 0.00 2.29
339 340 7.786178 AATGCACGTATTAATGAGTACACAT 57.214 32.000 0.00 0.00 0.00 3.21
340 341 7.460296 CAAATGCACGTATTAATGAGTACACA 58.540 34.615 0.00 0.00 0.00 3.72
341 342 6.410914 GCAAATGCACGTATTAATGAGTACAC 59.589 38.462 0.00 0.00 41.59 2.90
342 343 6.482835 GCAAATGCACGTATTAATGAGTACA 58.517 36.000 0.00 0.00 41.59 2.90
343 344 6.953091 GCAAATGCACGTATTAATGAGTAC 57.047 37.500 0.00 0.00 41.59 2.73
358 359 1.152510 ATCGTGTACGTGCAAATGCA 58.847 45.000 8.25 3.51 43.01 3.96
359 360 2.241259 AATCGTGTACGTGCAAATGC 57.759 45.000 8.25 0.00 40.80 3.56
360 361 4.577687 AGTAATCGTGTACGTGCAAATG 57.422 40.909 8.25 1.51 40.80 2.32
361 362 5.404946 ACTAGTAATCGTGTACGTGCAAAT 58.595 37.500 8.25 2.26 40.80 2.32
362 363 4.797471 ACTAGTAATCGTGTACGTGCAAA 58.203 39.130 8.25 0.00 40.80 3.68
363 364 4.424061 ACTAGTAATCGTGTACGTGCAA 57.576 40.909 8.25 0.00 40.80 4.08
364 365 4.869861 TCTACTAGTAATCGTGTACGTGCA 59.130 41.667 0.82 0.82 40.80 4.57
365 366 5.193936 GTCTACTAGTAATCGTGTACGTGC 58.806 45.833 3.76 0.00 40.80 5.34
366 367 6.336514 TGTCTACTAGTAATCGTGTACGTG 57.663 41.667 3.76 0.00 40.80 4.49
367 368 8.824159 ATATGTCTACTAGTAATCGTGTACGT 57.176 34.615 3.76 0.00 40.80 3.57
371 372 9.955102 TCCATATATGTCTACTAGTAATCGTGT 57.045 33.333 11.73 3.12 0.00 4.49
383 384 9.593134 GGACAGATCATTTCCATATATGTCTAC 57.407 37.037 11.73 4.35 40.18 2.59
502 503 8.515414 ACTGAGATGCTTAAACCTCATTTTTAC 58.485 33.333 0.00 0.00 35.42 2.01
676 709 9.313323 CCGTTTCTTTTCTTTTCTTTTGTTTTC 57.687 29.630 0.00 0.00 0.00 2.29
677 710 9.047371 TCCGTTTCTTTTCTTTTCTTTTGTTTT 57.953 25.926 0.00 0.00 0.00 2.43
679 712 7.330946 CCTCCGTTTCTTTTCTTTTCTTTTGTT 59.669 33.333 0.00 0.00 0.00 2.83
680 713 6.811665 CCTCCGTTTCTTTTCTTTTCTTTTGT 59.188 34.615 0.00 0.00 0.00 2.83
721 754 1.029681 GGTTGAGCACCTCCGTTTTT 58.970 50.000 0.00 0.00 43.29 1.94
722 755 1.164041 CGGTTGAGCACCTCCGTTTT 61.164 55.000 6.09 0.00 44.69 2.43
837 891 2.829914 CGGATCGGTGGGGTCGTA 60.830 66.667 0.00 0.00 0.00 3.43
863 917 2.066393 CGCTGATTGGAGGAGGGGA 61.066 63.158 0.00 0.00 0.00 4.81
1268 1370 0.620121 CCTCCTCTTGCCCTCCTTCT 60.620 60.000 0.00 0.00 0.00 2.85
1329 1431 4.254709 AGCTCCTTGCCGTGCACA 62.255 61.111 18.64 0.00 44.23 4.57
1372 1474 2.609491 CGTTGACGAAGGAGTTCATGGA 60.609 50.000 0.00 0.00 43.02 3.41
1619 1721 4.863131 GCACTAGTACTTAAACGACATGCT 59.137 41.667 0.00 0.00 0.00 3.79
1621 1723 5.288712 CCAGCACTAGTACTTAAACGACATG 59.711 44.000 0.00 0.00 0.00 3.21
1622 1724 5.184479 TCCAGCACTAGTACTTAAACGACAT 59.816 40.000 0.00 0.00 0.00 3.06
1623 1725 4.520111 TCCAGCACTAGTACTTAAACGACA 59.480 41.667 0.00 0.00 0.00 4.35
1624 1726 5.051891 TCCAGCACTAGTACTTAAACGAC 57.948 43.478 0.00 0.00 0.00 4.34
1625 1727 5.909621 ATCCAGCACTAGTACTTAAACGA 57.090 39.130 0.00 0.00 0.00 3.85
1626 1728 7.024340 TCTATCCAGCACTAGTACTTAAACG 57.976 40.000 0.00 0.00 0.00 3.60
1713 1815 7.601073 TTCTACTACGAACACGATCTAAGAA 57.399 36.000 0.00 0.00 0.00 2.52
1744 1846 5.235516 ACCACTAAAGTAACAGAACCATCG 58.764 41.667 0.00 0.00 0.00 3.84
1773 1875 3.077359 ACAACTTGCAGATAACCAGAGC 58.923 45.455 0.00 0.00 0.00 4.09
1780 1882 8.148351 ACTAGTACTTCAACAACTTGCAGATAA 58.852 33.333 0.00 0.00 0.00 1.75
1792 1894 7.350744 TCAACCAGTAACTAGTACTTCAACA 57.649 36.000 0.00 0.00 41.37 3.33
1802 1904 5.617751 GCAACTTGCATCAACCAGTAACTAG 60.618 44.000 8.97 0.00 44.26 2.57
1904 2023 4.142469 TGCATCATCACAGCAGAAATGAAG 60.142 41.667 3.27 1.26 32.31 3.02
2019 2152 0.307760 GAGTTGGTTGGTTCTGTGCG 59.692 55.000 0.00 0.00 0.00 5.34
2022 2155 2.958355 CAATGGAGTTGGTTGGTTCTGT 59.042 45.455 0.00 0.00 34.06 3.41
2034 2167 3.679980 CGAGACGATTGAACAATGGAGTT 59.320 43.478 14.42 0.00 32.00 3.01
2137 2278 9.590451 CAGCATAAAATTCAGTTACATCCAATT 57.410 29.630 0.00 0.00 0.00 2.32
2218 2359 5.417894 ACCTAGTAACTGTCGAATCACATGA 59.582 40.000 0.00 0.00 0.00 3.07
2247 2392 5.645497 GCACACTCACTTTTCAGATTAGGAT 59.355 40.000 0.00 0.00 0.00 3.24
2284 2429 7.705700 AGTTGTGGGGGTTATCTATACTTTTT 58.294 34.615 0.00 0.00 0.00 1.94
2285 2430 7.280044 AGTTGTGGGGGTTATCTATACTTTT 57.720 36.000 0.00 0.00 0.00 2.27
2286 2431 6.903340 AGTTGTGGGGGTTATCTATACTTT 57.097 37.500 0.00 0.00 0.00 2.66
2287 2432 8.577164 AATAGTTGTGGGGGTTATCTATACTT 57.423 34.615 0.00 0.00 0.00 2.24
2288 2433 7.237055 GGAATAGTTGTGGGGGTTATCTATACT 59.763 40.741 0.00 0.00 0.00 2.12
2289 2434 7.016858 TGGAATAGTTGTGGGGGTTATCTATAC 59.983 40.741 0.00 0.00 0.00 1.47
2290 2435 7.083628 TGGAATAGTTGTGGGGGTTATCTATA 58.916 38.462 0.00 0.00 0.00 1.31
2291 2436 5.914716 TGGAATAGTTGTGGGGGTTATCTAT 59.085 40.000 0.00 0.00 0.00 1.98
2292 2437 5.290335 TGGAATAGTTGTGGGGGTTATCTA 58.710 41.667 0.00 0.00 0.00 1.98
2293 2438 4.116113 TGGAATAGTTGTGGGGGTTATCT 58.884 43.478 0.00 0.00 0.00 1.98
2294 2439 4.513406 TGGAATAGTTGTGGGGGTTATC 57.487 45.455 0.00 0.00 0.00 1.75
2295 2440 5.481615 AATGGAATAGTTGTGGGGGTTAT 57.518 39.130 0.00 0.00 0.00 1.89
2296 2441 4.957606 AATGGAATAGTTGTGGGGGTTA 57.042 40.909 0.00 0.00 0.00 2.85
2297 2442 3.837731 CAAATGGAATAGTTGTGGGGGTT 59.162 43.478 0.00 0.00 30.10 4.11
2298 2443 3.440127 CAAATGGAATAGTTGTGGGGGT 58.560 45.455 0.00 0.00 30.10 4.95
2299 2444 2.765699 CCAAATGGAATAGTTGTGGGGG 59.234 50.000 0.00 0.00 37.39 5.40
2300 2445 3.707316 TCCAAATGGAATAGTTGTGGGG 58.293 45.455 0.00 0.00 42.18 4.96
2313 2458 2.965147 GGGGGTTATGTGATCCAAATGG 59.035 50.000 0.00 0.00 0.00 3.16
2314 2459 3.891366 GAGGGGGTTATGTGATCCAAATG 59.109 47.826 0.00 0.00 0.00 2.32
2315 2460 3.531397 TGAGGGGGTTATGTGATCCAAAT 59.469 43.478 0.00 0.00 0.00 2.32
2316 2461 2.922955 TGAGGGGGTTATGTGATCCAAA 59.077 45.455 0.00 0.00 0.00 3.28
2317 2462 2.567862 TGAGGGGGTTATGTGATCCAA 58.432 47.619 0.00 0.00 0.00 3.53
2318 2463 2.278657 TGAGGGGGTTATGTGATCCA 57.721 50.000 0.00 0.00 0.00 3.41
2319 2464 2.982488 AGATGAGGGGGTTATGTGATCC 59.018 50.000 0.00 0.00 0.00 3.36
2320 2465 4.713792 AAGATGAGGGGGTTATGTGATC 57.286 45.455 0.00 0.00 0.00 2.92
2321 2466 6.590656 TTAAAGATGAGGGGGTTATGTGAT 57.409 37.500 0.00 0.00 0.00 3.06
2322 2467 6.395780 TTTAAAGATGAGGGGGTTATGTGA 57.604 37.500 0.00 0.00 0.00 3.58
2323 2468 6.435904 TGTTTTAAAGATGAGGGGGTTATGTG 59.564 38.462 0.00 0.00 0.00 3.21
2324 2469 6.557568 TGTTTTAAAGATGAGGGGGTTATGT 58.442 36.000 0.00 0.00 0.00 2.29
2325 2470 6.096846 CCTGTTTTAAAGATGAGGGGGTTATG 59.903 42.308 0.00 0.00 0.00 1.90
2326 2471 6.194967 CCTGTTTTAAAGATGAGGGGGTTAT 58.805 40.000 0.00 0.00 0.00 1.89
2327 2472 5.517655 CCCTGTTTTAAAGATGAGGGGGTTA 60.518 44.000 12.13 0.00 37.14 2.85
2328 2473 4.416516 CCTGTTTTAAAGATGAGGGGGTT 58.583 43.478 0.00 0.00 0.00 4.11
2329 2474 3.245622 CCCTGTTTTAAAGATGAGGGGGT 60.246 47.826 12.13 0.00 37.14 4.95
2330 2475 3.245622 ACCCTGTTTTAAAGATGAGGGGG 60.246 47.826 19.35 13.30 44.00 5.40
2331 2476 4.047627 ACCCTGTTTTAAAGATGAGGGG 57.952 45.455 19.35 14.03 44.00 4.79
2332 2477 5.325239 AGAACCCTGTTTTAAAGATGAGGG 58.675 41.667 15.99 15.99 45.05 4.30
2333 2478 6.901081 AAGAACCCTGTTTTAAAGATGAGG 57.099 37.500 0.00 0.00 0.00 3.86
2335 2480 9.020731 GGATTAAGAACCCTGTTTTAAAGATGA 57.979 33.333 0.00 0.00 0.00 2.92
2336 2481 8.251026 GGGATTAAGAACCCTGTTTTAAAGATG 58.749 37.037 0.00 0.00 42.56 2.90
2337 2482 7.399191 GGGGATTAAGAACCCTGTTTTAAAGAT 59.601 37.037 12.72 0.00 44.97 2.40
2338 2483 6.722590 GGGGATTAAGAACCCTGTTTTAAAGA 59.277 38.462 12.72 0.00 44.97 2.52
2339 2484 6.931838 GGGGATTAAGAACCCTGTTTTAAAG 58.068 40.000 12.72 0.00 44.97 1.85
2340 2485 6.921486 GGGGATTAAGAACCCTGTTTTAAA 57.079 37.500 12.72 0.00 44.97 1.52
2349 2494 3.952323 GCAGTTTAGGGGATTAAGAACCC 59.048 47.826 0.00 0.00 45.06 4.11
2350 2495 3.952323 GGCAGTTTAGGGGATTAAGAACC 59.048 47.826 0.00 0.00 0.00 3.62
2351 2496 3.952323 GGGCAGTTTAGGGGATTAAGAAC 59.048 47.826 0.00 0.00 0.00 3.01
2352 2497 3.053170 GGGGCAGTTTAGGGGATTAAGAA 60.053 47.826 0.00 0.00 0.00 2.52
2353 2498 2.512476 GGGGCAGTTTAGGGGATTAAGA 59.488 50.000 0.00 0.00 0.00 2.10
2354 2499 2.243736 TGGGGCAGTTTAGGGGATTAAG 59.756 50.000 0.00 0.00 0.00 1.85
2355 2500 2.289467 TGGGGCAGTTTAGGGGATTAA 58.711 47.619 0.00 0.00 0.00 1.40
2356 2501 1.988539 TGGGGCAGTTTAGGGGATTA 58.011 50.000 0.00 0.00 0.00 1.75
2357 2502 1.089123 TTGGGGCAGTTTAGGGGATT 58.911 50.000 0.00 0.00 0.00 3.01
2358 2503 1.089123 TTTGGGGCAGTTTAGGGGAT 58.911 50.000 0.00 0.00 0.00 3.85
2359 2504 0.113580 GTTTGGGGCAGTTTAGGGGA 59.886 55.000 0.00 0.00 0.00 4.81
2360 2505 0.902984 GGTTTGGGGCAGTTTAGGGG 60.903 60.000 0.00 0.00 0.00 4.79
2361 2506 1.248101 CGGTTTGGGGCAGTTTAGGG 61.248 60.000 0.00 0.00 0.00 3.53
2362 2507 1.248101 CCGGTTTGGGGCAGTTTAGG 61.248 60.000 0.00 0.00 0.00 2.69
2363 2508 0.250989 TCCGGTTTGGGGCAGTTTAG 60.251 55.000 0.00 0.00 38.76 1.85
2364 2509 0.537828 GTCCGGTTTGGGGCAGTTTA 60.538 55.000 0.00 0.00 38.76 2.01
2365 2510 1.830847 GTCCGGTTTGGGGCAGTTT 60.831 57.895 0.00 0.00 38.76 2.66
2366 2511 2.203437 GTCCGGTTTGGGGCAGTT 60.203 61.111 0.00 0.00 38.76 3.16
2367 2512 2.575455 TTTGTCCGGTTTGGGGCAGT 62.575 55.000 0.00 0.00 43.74 4.40
2368 2513 1.184970 ATTTGTCCGGTTTGGGGCAG 61.185 55.000 0.00 0.00 43.74 4.85
2369 2514 1.152440 ATTTGTCCGGTTTGGGGCA 60.152 52.632 0.00 0.00 40.66 5.36
2370 2515 1.182385 TGATTTGTCCGGTTTGGGGC 61.182 55.000 0.00 0.00 38.76 5.80
2371 2516 0.601057 GTGATTTGTCCGGTTTGGGG 59.399 55.000 0.00 0.00 38.76 4.96
2372 2517 0.601057 GGTGATTTGTCCGGTTTGGG 59.399 55.000 0.00 0.00 38.76 4.12
2373 2518 0.601057 GGGTGATTTGTCCGGTTTGG 59.399 55.000 0.00 0.00 40.09 3.28
2374 2519 0.601057 GGGGTGATTTGTCCGGTTTG 59.399 55.000 0.00 0.00 0.00 2.93
2375 2520 0.541063 GGGGGTGATTTGTCCGGTTT 60.541 55.000 0.00 0.00 0.00 3.27
2376 2521 1.076014 GGGGGTGATTTGTCCGGTT 59.924 57.895 0.00 0.00 0.00 4.44
2377 2522 0.548197 TAGGGGGTGATTTGTCCGGT 60.548 55.000 0.00 0.00 0.00 5.28
2378 2523 0.621609 TTAGGGGGTGATTTGTCCGG 59.378 55.000 0.00 0.00 0.00 5.14
2379 2524 1.680860 GGTTAGGGGGTGATTTGTCCG 60.681 57.143 0.00 0.00 0.00 4.79
2380 2525 1.639108 AGGTTAGGGGGTGATTTGTCC 59.361 52.381 0.00 0.00 0.00 4.02
2381 2526 3.245122 TGAAGGTTAGGGGGTGATTTGTC 60.245 47.826 0.00 0.00 0.00 3.18
2382 2527 2.719705 TGAAGGTTAGGGGGTGATTTGT 59.280 45.455 0.00 0.00 0.00 2.83
2383 2528 3.089284 GTGAAGGTTAGGGGGTGATTTG 58.911 50.000 0.00 0.00 0.00 2.32
2384 2529 2.993863 AGTGAAGGTTAGGGGGTGATTT 59.006 45.455 0.00 0.00 0.00 2.17
2385 2530 2.644151 AGTGAAGGTTAGGGGGTGATT 58.356 47.619 0.00 0.00 0.00 2.57
2386 2531 2.361085 AGTGAAGGTTAGGGGGTGAT 57.639 50.000 0.00 0.00 0.00 3.06
2387 2532 2.127651 AAGTGAAGGTTAGGGGGTGA 57.872 50.000 0.00 0.00 0.00 4.02
2388 2533 2.971901 AAAGTGAAGGTTAGGGGGTG 57.028 50.000 0.00 0.00 0.00 4.61
2389 2534 2.307980 GCTAAAGTGAAGGTTAGGGGGT 59.692 50.000 0.00 0.00 0.00 4.95
2390 2535 2.679930 CGCTAAAGTGAAGGTTAGGGGG 60.680 54.545 0.00 0.00 36.90 5.40
2391 2536 2.629051 CGCTAAAGTGAAGGTTAGGGG 58.371 52.381 0.00 0.00 36.90 4.79
2392 2537 2.027469 ACCGCTAAAGTGAAGGTTAGGG 60.027 50.000 0.00 0.00 39.02 3.53
2393 2538 3.329929 ACCGCTAAAGTGAAGGTTAGG 57.670 47.619 0.00 0.00 0.00 2.69
2394 2539 4.809426 CCATACCGCTAAAGTGAAGGTTAG 59.191 45.833 0.00 0.00 36.49 2.34
2395 2540 4.383335 CCCATACCGCTAAAGTGAAGGTTA 60.383 45.833 0.00 0.00 36.49 2.85
2396 2541 3.606687 CCATACCGCTAAAGTGAAGGTT 58.393 45.455 0.00 0.00 36.49 3.50
2397 2542 2.093128 CCCATACCGCTAAAGTGAAGGT 60.093 50.000 0.00 0.00 38.86 3.50
2398 2543 2.169769 TCCCATACCGCTAAAGTGAAGG 59.830 50.000 0.00 0.00 0.00 3.46
2399 2544 3.195661 GTCCCATACCGCTAAAGTGAAG 58.804 50.000 0.00 0.00 0.00 3.02
2400 2545 2.417651 CGTCCCATACCGCTAAAGTGAA 60.418 50.000 0.00 0.00 0.00 3.18
2401 2546 1.135527 CGTCCCATACCGCTAAAGTGA 59.864 52.381 0.00 0.00 0.00 3.41
2402 2547 1.567504 CGTCCCATACCGCTAAAGTG 58.432 55.000 0.00 0.00 0.00 3.16
2403 2548 0.462789 CCGTCCCATACCGCTAAAGT 59.537 55.000 0.00 0.00 0.00 2.66
2404 2549 0.462789 ACCGTCCCATACCGCTAAAG 59.537 55.000 0.00 0.00 0.00 1.85
2405 2550 0.176219 CACCGTCCCATACCGCTAAA 59.824 55.000 0.00 0.00 0.00 1.85
2406 2551 1.678598 CCACCGTCCCATACCGCTAA 61.679 60.000 0.00 0.00 0.00 3.09
2407 2552 2.129146 CCACCGTCCCATACCGCTA 61.129 63.158 0.00 0.00 0.00 4.26
2408 2553 3.467226 CCACCGTCCCATACCGCT 61.467 66.667 0.00 0.00 0.00 5.52
2409 2554 2.808181 AAACCACCGTCCCATACCGC 62.808 60.000 0.00 0.00 0.00 5.68
2410 2555 0.321830 AAAACCACCGTCCCATACCG 60.322 55.000 0.00 0.00 0.00 4.02
2411 2556 1.170442 CAAAACCACCGTCCCATACC 58.830 55.000 0.00 0.00 0.00 2.73
2412 2557 0.524414 GCAAAACCACCGTCCCATAC 59.476 55.000 0.00 0.00 0.00 2.39
2413 2558 0.110678 TGCAAAACCACCGTCCCATA 59.889 50.000 0.00 0.00 0.00 2.74
2414 2559 0.541764 ATGCAAAACCACCGTCCCAT 60.542 50.000 0.00 0.00 0.00 4.00
2415 2560 0.110678 TATGCAAAACCACCGTCCCA 59.889 50.000 0.00 0.00 0.00 4.37
2416 2561 0.524414 GTATGCAAAACCACCGTCCC 59.476 55.000 0.00 0.00 0.00 4.46
2417 2562 0.167251 CGTATGCAAAACCACCGTCC 59.833 55.000 0.00 0.00 0.00 4.79
2418 2563 0.869730 ACGTATGCAAAACCACCGTC 59.130 50.000 0.00 0.00 0.00 4.79
2419 2564 0.589223 CACGTATGCAAAACCACCGT 59.411 50.000 0.00 0.00 0.00 4.83
2420 2565 0.109964 CCACGTATGCAAAACCACCG 60.110 55.000 0.00 0.00 0.00 4.94
2421 2566 0.388006 GCCACGTATGCAAAACCACC 60.388 55.000 4.50 0.00 0.00 4.61
2422 2567 0.727793 CGCCACGTATGCAAAACCAC 60.728 55.000 9.57 0.00 0.00 4.16
2423 2568 1.167155 ACGCCACGTATGCAAAACCA 61.167 50.000 9.57 0.00 38.73 3.67
2424 2569 0.453782 GACGCCACGTATGCAAAACC 60.454 55.000 9.57 0.00 41.37 3.27
2425 2570 0.515564 AGACGCCACGTATGCAAAAC 59.484 50.000 9.57 0.00 41.37 2.43
2426 2571 0.515127 CAGACGCCACGTATGCAAAA 59.485 50.000 9.57 0.00 41.83 2.44
2427 2572 1.295357 CCAGACGCCACGTATGCAAA 61.295 55.000 9.09 0.00 45.82 3.68
2428 2573 1.739929 CCAGACGCCACGTATGCAA 60.740 57.895 9.09 0.00 45.82 4.08
2429 2574 2.125713 CCAGACGCCACGTATGCA 60.126 61.111 9.09 0.00 45.82 3.96
2430 2575 3.564027 GCCAGACGCCACGTATGC 61.564 66.667 9.09 0.00 45.82 3.14
2431 2576 1.447838 AAGCCAGACGCCACGTATG 60.448 57.895 7.71 7.71 46.56 2.39
2432 2577 1.447838 CAAGCCAGACGCCACGTAT 60.448 57.895 0.00 0.00 41.37 3.06
2433 2578 2.048597 CAAGCCAGACGCCACGTA 60.049 61.111 0.00 0.00 41.37 3.57
2434 2579 4.988598 CCAAGCCAGACGCCACGT 62.989 66.667 0.00 0.00 45.10 4.49
2461 2606 4.742201 CCTGTCCGACGTGGCCAG 62.742 72.222 5.11 2.58 37.80 4.85
2466 2611 4.742201 CAGCCCCTGTCCGACGTG 62.742 72.222 0.00 0.00 0.00 4.49
2469 2614 4.767255 CAGCAGCCCCTGTCCGAC 62.767 72.222 0.00 0.00 33.43 4.79
2473 2618 4.729918 CACCCAGCAGCCCCTGTC 62.730 72.222 0.00 0.00 33.43 3.51
2480 2625 3.605749 TTAGACCGCACCCAGCAGC 62.606 63.158 0.00 0.00 46.13 5.25
2481 2626 0.605319 TTTTAGACCGCACCCAGCAG 60.605 55.000 0.00 0.00 46.13 4.24
2482 2627 0.887387 GTTTTAGACCGCACCCAGCA 60.887 55.000 0.00 0.00 46.13 4.41
2483 2628 1.873863 GTTTTAGACCGCACCCAGC 59.126 57.895 0.00 0.00 40.87 4.85
2484 2629 0.320073 TCGTTTTAGACCGCACCCAG 60.320 55.000 0.00 0.00 0.00 4.45
2485 2630 0.600782 GTCGTTTTAGACCGCACCCA 60.601 55.000 0.00 0.00 35.22 4.51
2486 2631 2.156542 GTCGTTTTAGACCGCACCC 58.843 57.895 0.00 0.00 35.22 4.61
2509 2654 3.835790 TTTGGGTCGAACCGGCTGG 62.836 63.158 16.31 11.02 39.83 4.85
2510 2655 1.644786 GATTTGGGTCGAACCGGCTG 61.645 60.000 16.31 0.00 39.83 4.85
2511 2656 1.376812 GATTTGGGTCGAACCGGCT 60.377 57.895 16.31 0.29 39.83 5.52
2512 2657 1.644786 CTGATTTGGGTCGAACCGGC 61.645 60.000 16.31 4.34 39.83 6.13
2513 2658 1.644786 GCTGATTTGGGTCGAACCGG 61.645 60.000 16.31 0.00 39.83 5.28
2514 2659 1.644786 GGCTGATTTGGGTCGAACCG 61.645 60.000 16.31 0.00 39.83 4.44
2515 2660 1.644786 CGGCTGATTTGGGTCGAACC 61.645 60.000 14.24 14.24 37.60 3.62
2516 2661 1.794222 CGGCTGATTTGGGTCGAAC 59.206 57.895 0.00 0.00 31.82 3.95
2517 2662 2.038269 GCGGCTGATTTGGGTCGAA 61.038 57.895 0.00 0.00 31.82 3.71
2518 2663 2.435938 GCGGCTGATTTGGGTCGA 60.436 61.111 0.00 0.00 31.82 4.20
2519 2664 3.508840 GGCGGCTGATTTGGGTCG 61.509 66.667 0.00 0.00 0.00 4.79
2520 2665 3.508840 CGGCGGCTGATTTGGGTC 61.509 66.667 7.61 0.00 0.00 4.46
2535 2680 4.160635 CTACAAAAGCGGCGGCGG 62.161 66.667 33.02 17.91 46.35 6.13
2536 2681 4.811761 GCTACAAAAGCGGCGGCG 62.812 66.667 28.70 28.70 46.35 6.46
2544 2689 5.907391 CGTTCCAGTACAAAAGCTACAAAAG 59.093 40.000 0.00 0.00 0.00 2.27
2545 2690 5.731126 GCGTTCCAGTACAAAAGCTACAAAA 60.731 40.000 0.00 0.00 0.00 2.44
2546 2691 4.260866 GCGTTCCAGTACAAAAGCTACAAA 60.261 41.667 0.00 0.00 0.00 2.83
2547 2692 3.249080 GCGTTCCAGTACAAAAGCTACAA 59.751 43.478 0.00 0.00 0.00 2.41
2548 2693 2.803956 GCGTTCCAGTACAAAAGCTACA 59.196 45.455 0.00 0.00 0.00 2.74
2549 2694 2.803956 TGCGTTCCAGTACAAAAGCTAC 59.196 45.455 12.20 0.00 32.18 3.58
2550 2695 3.114668 TGCGTTCCAGTACAAAAGCTA 57.885 42.857 12.20 1.21 32.18 3.32
2551 2696 1.961793 TGCGTTCCAGTACAAAAGCT 58.038 45.000 12.20 0.00 32.18 3.74
2552 2697 2.766970 TTGCGTTCCAGTACAAAAGC 57.233 45.000 0.00 1.36 0.00 3.51
2553 2698 2.979813 GCATTGCGTTCCAGTACAAAAG 59.020 45.455 0.00 0.00 0.00 2.27
2554 2699 2.621055 AGCATTGCGTTCCAGTACAAAA 59.379 40.909 2.38 0.00 0.00 2.44
2555 2700 2.031245 CAGCATTGCGTTCCAGTACAAA 60.031 45.455 2.38 0.00 0.00 2.83
2556 2701 1.535028 CAGCATTGCGTTCCAGTACAA 59.465 47.619 2.38 0.00 0.00 2.41
2557 2702 1.155889 CAGCATTGCGTTCCAGTACA 58.844 50.000 2.38 0.00 0.00 2.90
2558 2703 1.135972 CACAGCATTGCGTTCCAGTAC 60.136 52.381 2.38 0.00 0.00 2.73
2559 2704 1.155889 CACAGCATTGCGTTCCAGTA 58.844 50.000 2.38 0.00 0.00 2.74
2560 2705 0.819259 ACACAGCATTGCGTTCCAGT 60.819 50.000 2.38 0.00 0.00 4.00
2561 2706 0.386352 CACACAGCATTGCGTTCCAG 60.386 55.000 2.38 0.00 0.00 3.86
2562 2707 0.817229 TCACACAGCATTGCGTTCCA 60.817 50.000 2.38 0.00 0.00 3.53
2563 2708 0.110056 CTCACACAGCATTGCGTTCC 60.110 55.000 2.38 0.00 0.00 3.62
2564 2709 3.373020 CTCACACAGCATTGCGTTC 57.627 52.632 2.38 0.00 0.00 3.95
2574 2719 5.679734 AAATCAGTACAAAGCTCACACAG 57.320 39.130 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.