Multiple sequence alignment - TraesCS6D01G062300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G062300 chr6D 100.000 2551 0 0 1 2551 29088709 29091259 0.000000e+00 4711
1 TraesCS6D01G062300 chr6D 92.917 833 25 10 846 1654 29381430 29380608 0.000000e+00 1181
2 TraesCS6D01G062300 chr6D 88.527 828 69 13 737 1561 16307490 16306686 0.000000e+00 979
3 TraesCS6D01G062300 chr6D 90.398 729 48 16 833 1553 24001412 24002126 0.000000e+00 939
4 TraesCS6D01G062300 chr6D 87.578 483 35 7 2070 2529 29380143 29379663 1.040000e-148 536
5 TraesCS6D01G062300 chr6D 94.382 267 9 4 1663 1928 29380561 29380300 3.060000e-109 405
6 TraesCS6D01G062300 chr6A 91.910 1162 51 13 524 1654 33536145 33534996 0.000000e+00 1585
7 TraesCS6D01G062300 chr6A 84.802 1033 95 40 566 1579 16659107 16658118 0.000000e+00 981
8 TraesCS6D01G062300 chr6A 87.897 851 60 27 731 1572 16594041 16593225 0.000000e+00 961
9 TraesCS6D01G062300 chr6A 95.199 604 24 3 979 1577 33010797 33011400 0.000000e+00 950
10 TraesCS6D01G062300 chr6A 87.838 370 28 8 2168 2524 33534427 33534062 3.930000e-113 418
11 TraesCS6D01G062300 chr6B 92.672 696 27 6 979 1653 59723180 59723872 0.000000e+00 981
12 TraesCS6D01G062300 chr6B 96.007 601 19 2 979 1577 59100549 59101146 0.000000e+00 972
13 TraesCS6D01G062300 chr6B 92.248 387 24 4 2168 2551 59724506 59724889 6.210000e-151 544
14 TraesCS6D01G062300 chr6B 87.918 389 32 8 1681 2063 59723929 59724308 6.480000e-121 444
15 TraesCS6D01G062300 chr6B 82.489 474 57 13 2070 2521 60661719 60661250 2.380000e-105 392
16 TraesCS6D01G062300 chr6B 81.492 362 39 18 2216 2551 60612604 60612245 3.230000e-69 272
17 TraesCS6D01G062300 chr6B 80.822 365 42 19 2214 2551 60627378 60627015 7.000000e-66 261
18 TraesCS6D01G062300 chr6B 87.000 100 10 1 2070 2166 59724377 59724476 2.680000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G062300 chr6D 29088709 29091259 2550 False 4711.000000 4711 100.000000 1 2551 1 chr6D.!!$F2 2550
1 TraesCS6D01G062300 chr6D 16306686 16307490 804 True 979.000000 979 88.527000 737 1561 1 chr6D.!!$R1 824
2 TraesCS6D01G062300 chr6D 24001412 24002126 714 False 939.000000 939 90.398000 833 1553 1 chr6D.!!$F1 720
3 TraesCS6D01G062300 chr6D 29379663 29381430 1767 True 707.333333 1181 91.625667 846 2529 3 chr6D.!!$R2 1683
4 TraesCS6D01G062300 chr6A 33534062 33536145 2083 True 1001.500000 1585 89.874000 524 2524 2 chr6A.!!$R3 2000
5 TraesCS6D01G062300 chr6A 16658118 16659107 989 True 981.000000 981 84.802000 566 1579 1 chr6A.!!$R2 1013
6 TraesCS6D01G062300 chr6A 16593225 16594041 816 True 961.000000 961 87.897000 731 1572 1 chr6A.!!$R1 841
7 TraesCS6D01G062300 chr6A 33010797 33011400 603 False 950.000000 950 95.199000 979 1577 1 chr6A.!!$F1 598
8 TraesCS6D01G062300 chr6B 59100549 59101146 597 False 972.000000 972 96.007000 979 1577 1 chr6B.!!$F1 598
9 TraesCS6D01G062300 chr6B 59723180 59724889 1709 False 519.750000 981 89.959500 979 2551 4 chr6B.!!$F2 1572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
309 310 0.033228 CAAGGGAGATAGAGCGCTGG 59.967 60.0 18.48 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2205 2418 0.451383 GTGATGCCTGTTATTGCGCA 59.549 50.0 5.66 5.66 35.35 6.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.220222 CATGTGCTCCTCGGCCTA 58.780 61.111 0.00 0.00 0.00 3.93
18 19 1.068753 CATGTGCTCCTCGGCCTAG 59.931 63.158 0.00 0.00 0.00 3.02
19 20 2.136878 ATGTGCTCCTCGGCCTAGG 61.137 63.158 17.42 17.42 38.06 3.02
20 21 4.228567 GTGCTCCTCGGCCTAGGC 62.229 72.222 26.55 26.55 36.51 3.93
21 22 4.777854 TGCTCCTCGGCCTAGGCA 62.778 66.667 34.09 14.89 44.11 4.75
22 23 4.228567 GCTCCTCGGCCTAGGCAC 62.229 72.222 34.09 21.86 44.11 5.01
23 24 3.905678 CTCCTCGGCCTAGGCACG 61.906 72.222 34.09 30.83 44.11 5.34
24 25 4.435970 TCCTCGGCCTAGGCACGA 62.436 66.667 31.87 31.87 44.11 4.35
25 26 4.208686 CCTCGGCCTAGGCACGAC 62.209 72.222 34.09 16.36 44.11 4.34
26 27 3.449227 CTCGGCCTAGGCACGACA 61.449 66.667 34.09 18.05 44.11 4.35
27 28 3.701604 CTCGGCCTAGGCACGACAC 62.702 68.421 34.09 15.23 44.11 3.67
28 29 4.063967 CGGCCTAGGCACGACACA 62.064 66.667 34.09 0.00 44.11 3.72
29 30 2.584608 GGCCTAGGCACGACACAT 59.415 61.111 34.09 0.00 44.11 3.21
30 31 1.078426 GGCCTAGGCACGACACATT 60.078 57.895 34.09 0.00 44.11 2.71
31 32 0.676782 GGCCTAGGCACGACACATTT 60.677 55.000 34.09 0.00 44.11 2.32
32 33 1.406341 GGCCTAGGCACGACACATTTA 60.406 52.381 34.09 0.00 44.11 1.40
33 34 1.933853 GCCTAGGCACGACACATTTAG 59.066 52.381 29.33 0.00 41.49 1.85
34 35 1.933853 CCTAGGCACGACACATTTAGC 59.066 52.381 0.00 0.00 0.00 3.09
35 36 2.616960 CTAGGCACGACACATTTAGCA 58.383 47.619 0.00 0.00 0.00 3.49
36 37 1.890876 AGGCACGACACATTTAGCAA 58.109 45.000 0.00 0.00 0.00 3.91
37 38 2.226330 AGGCACGACACATTTAGCAAA 58.774 42.857 0.00 0.00 0.00 3.68
38 39 2.621055 AGGCACGACACATTTAGCAAAA 59.379 40.909 0.00 0.00 0.00 2.44
39 40 2.724174 GGCACGACACATTTAGCAAAAC 59.276 45.455 0.00 0.00 0.00 2.43
40 41 2.400408 GCACGACACATTTAGCAAAACG 59.600 45.455 0.00 0.00 0.00 3.60
41 42 2.970609 CACGACACATTTAGCAAAACGG 59.029 45.455 0.00 0.00 0.00 4.44
42 43 2.031508 ACGACACATTTAGCAAAACGGG 60.032 45.455 0.00 0.00 0.00 5.28
43 44 2.031508 CGACACATTTAGCAAAACGGGT 60.032 45.455 0.00 0.00 0.00 5.28
44 45 3.561503 GACACATTTAGCAAAACGGGTC 58.438 45.455 0.00 0.00 0.00 4.46
45 46 2.031508 ACACATTTAGCAAAACGGGTCG 60.032 45.455 0.00 0.00 0.00 4.79
46 47 2.031508 CACATTTAGCAAAACGGGTCGT 60.032 45.455 0.00 0.00 43.97 4.34
47 48 2.224784 ACATTTAGCAAAACGGGTCGTC 59.775 45.455 0.00 0.00 39.99 4.20
48 49 1.228533 TTTAGCAAAACGGGTCGTCC 58.771 50.000 0.00 0.00 39.99 4.79
58 59 4.955774 GGTCGTCCCGCAACACGT 62.956 66.667 0.00 0.00 41.42 4.49
59 60 2.963320 GTCGTCCCGCAACACGTT 60.963 61.111 0.00 0.00 41.42 3.99
60 61 2.202905 TCGTCCCGCAACACGTTT 60.203 55.556 0.00 0.00 41.42 3.60
61 62 1.067084 TCGTCCCGCAACACGTTTA 59.933 52.632 0.00 0.00 41.42 2.01
62 63 0.529337 TCGTCCCGCAACACGTTTAA 60.529 50.000 0.00 0.00 41.42 1.52
63 64 0.383368 CGTCCCGCAACACGTTTAAC 60.383 55.000 0.00 0.00 41.42 2.01
64 65 0.656785 GTCCCGCAACACGTTTAACA 59.343 50.000 0.00 0.00 41.42 2.41
65 66 0.656785 TCCCGCAACACGTTTAACAC 59.343 50.000 0.00 0.00 41.42 3.32
74 75 3.167093 CGTTTAACACGTTTGGGCC 57.833 52.632 0.00 0.00 44.49 5.80
75 76 0.381089 CGTTTAACACGTTTGGGCCA 59.619 50.000 0.00 0.00 44.49 5.36
76 77 1.842720 GTTTAACACGTTTGGGCCAC 58.157 50.000 5.23 0.00 0.00 5.01
77 78 1.134560 GTTTAACACGTTTGGGCCACA 59.865 47.619 5.23 0.00 0.00 4.17
78 79 1.693627 TTAACACGTTTGGGCCACAT 58.306 45.000 5.23 0.00 0.00 3.21
79 80 0.955178 TAACACGTTTGGGCCACATG 59.045 50.000 5.23 8.34 0.00 3.21
80 81 2.049248 CACGTTTGGGCCACATGC 60.049 61.111 5.23 0.00 40.16 4.06
81 82 2.203480 ACGTTTGGGCCACATGCT 60.203 55.556 5.23 0.00 40.92 3.79
82 83 1.832167 ACGTTTGGGCCACATGCTT 60.832 52.632 5.23 0.00 40.92 3.91
83 84 1.367102 CGTTTGGGCCACATGCTTT 59.633 52.632 5.23 0.00 40.92 3.51
84 85 0.249826 CGTTTGGGCCACATGCTTTT 60.250 50.000 5.23 0.00 40.92 2.27
85 86 1.809651 CGTTTGGGCCACATGCTTTTT 60.810 47.619 5.23 0.00 40.92 1.94
86 87 1.603326 GTTTGGGCCACATGCTTTTTG 59.397 47.619 5.23 0.00 40.92 2.44
87 88 0.534652 TTGGGCCACATGCTTTTTGC 60.535 50.000 5.23 0.00 40.92 3.68
88 89 1.672030 GGGCCACATGCTTTTTGCC 60.672 57.895 4.39 0.00 42.00 4.52
89 90 1.672030 GGCCACATGCTTTTTGCCC 60.672 57.895 0.00 0.00 42.00 5.36
90 91 1.372307 GCCACATGCTTTTTGCCCT 59.628 52.632 0.00 0.00 42.00 5.19
91 92 0.952010 GCCACATGCTTTTTGCCCTG 60.952 55.000 0.00 0.00 42.00 4.45
92 93 0.393820 CCACATGCTTTTTGCCCTGT 59.606 50.000 0.00 0.00 42.00 4.00
93 94 1.202675 CCACATGCTTTTTGCCCTGTT 60.203 47.619 0.00 0.00 42.00 3.16
94 95 1.868498 CACATGCTTTTTGCCCTGTTG 59.132 47.619 0.00 0.00 42.00 3.33
95 96 1.202675 ACATGCTTTTTGCCCTGTTGG 60.203 47.619 0.00 0.00 42.00 3.77
116 117 4.406648 GGCTATTTTAGGCCATTTTGCT 57.593 40.909 5.01 0.00 46.84 3.91
117 118 5.529581 GGCTATTTTAGGCCATTTTGCTA 57.470 39.130 5.01 0.00 46.84 3.49
118 119 6.101650 GGCTATTTTAGGCCATTTTGCTAT 57.898 37.500 5.01 0.00 46.84 2.97
119 120 6.524734 GGCTATTTTAGGCCATTTTGCTATT 58.475 36.000 5.01 0.00 46.84 1.73
120 121 6.424812 GGCTATTTTAGGCCATTTTGCTATTG 59.575 38.462 5.01 0.00 46.84 1.90
121 122 6.424812 GCTATTTTAGGCCATTTTGCTATTGG 59.575 38.462 5.01 0.00 0.00 3.16
122 123 4.751767 TTTAGGCCATTTTGCTATTGGG 57.248 40.909 5.01 0.00 0.00 4.12
123 124 3.384816 GGCCATTTTGCTATTGGGC 57.615 52.632 0.00 8.03 46.95 5.36
125 126 1.944032 GCCATTTTGCTATTGGGCTG 58.056 50.000 0.00 0.00 38.37 4.85
126 127 1.207811 GCCATTTTGCTATTGGGCTGT 59.792 47.619 0.00 0.00 38.37 4.40
127 128 2.355007 GCCATTTTGCTATTGGGCTGTT 60.355 45.455 0.00 0.00 38.37 3.16
128 129 3.869526 GCCATTTTGCTATTGGGCTGTTT 60.870 43.478 0.00 0.00 38.37 2.83
129 130 4.325972 CCATTTTGCTATTGGGCTGTTTT 58.674 39.130 0.00 0.00 0.00 2.43
130 131 4.761227 CCATTTTGCTATTGGGCTGTTTTT 59.239 37.500 0.00 0.00 0.00 1.94
173 174 8.592105 AAAATCAAACATAAACAGTCCATGTG 57.408 30.769 1.67 0.00 43.00 3.21
174 175 5.119931 TCAAACATAAACAGTCCATGTGC 57.880 39.130 1.67 0.00 43.00 4.57
175 176 4.022416 TCAAACATAAACAGTCCATGTGCC 60.022 41.667 1.67 0.00 43.00 5.01
176 177 2.446435 ACATAAACAGTCCATGTGCCC 58.554 47.619 0.00 0.00 43.00 5.36
177 178 2.224992 ACATAAACAGTCCATGTGCCCA 60.225 45.455 0.00 0.00 43.00 5.36
178 179 2.198827 TAAACAGTCCATGTGCCCAG 57.801 50.000 0.00 0.00 43.00 4.45
179 180 1.181098 AAACAGTCCATGTGCCCAGC 61.181 55.000 0.00 0.00 43.00 4.85
180 181 2.753043 CAGTCCATGTGCCCAGCC 60.753 66.667 0.00 0.00 0.00 4.85
181 182 2.937689 AGTCCATGTGCCCAGCCT 60.938 61.111 0.00 0.00 0.00 4.58
182 183 2.439156 GTCCATGTGCCCAGCCTC 60.439 66.667 0.00 0.00 0.00 4.70
183 184 2.934932 TCCATGTGCCCAGCCTCA 60.935 61.111 0.00 0.00 0.00 3.86
184 185 2.753043 CCATGTGCCCAGCCTCAC 60.753 66.667 0.00 0.00 0.00 3.51
185 186 3.129502 CATGTGCCCAGCCTCACG 61.130 66.667 0.00 0.00 36.06 4.35
186 187 4.415150 ATGTGCCCAGCCTCACGG 62.415 66.667 0.00 0.00 36.06 4.94
196 197 3.353836 CCTCACGGCCCAAACACG 61.354 66.667 0.00 0.00 0.00 4.49
197 198 2.280524 CTCACGGCCCAAACACGA 60.281 61.111 0.00 0.00 0.00 4.35
198 199 2.589442 TCACGGCCCAAACACGAC 60.589 61.111 0.00 0.00 0.00 4.34
199 200 3.656045 CACGGCCCAAACACGACC 61.656 66.667 0.00 0.00 0.00 4.79
200 201 4.941309 ACGGCCCAAACACGACCC 62.941 66.667 0.00 0.00 0.00 4.46
201 202 4.636435 CGGCCCAAACACGACCCT 62.636 66.667 0.00 0.00 0.00 4.34
202 203 2.983592 GGCCCAAACACGACCCTG 60.984 66.667 0.00 0.00 0.00 4.45
203 204 2.983592 GCCCAAACACGACCCTGG 60.984 66.667 0.00 0.00 0.00 4.45
204 205 2.983592 CCCAAACACGACCCTGGC 60.984 66.667 0.00 0.00 0.00 4.85
205 206 3.353836 CCAAACACGACCCTGGCG 61.354 66.667 0.00 0.00 0.00 5.69
206 207 3.353836 CAAACACGACCCTGGCGG 61.354 66.667 0.00 0.00 37.81 6.13
222 223 3.428282 GGTTTAGCCCGTGCCGTG 61.428 66.667 0.00 0.00 38.69 4.94
223 224 4.097863 GTTTAGCCCGTGCCGTGC 62.098 66.667 0.00 0.00 38.69 5.34
224 225 4.323477 TTTAGCCCGTGCCGTGCT 62.323 61.111 9.18 9.18 43.60 4.40
225 226 2.945161 TTTAGCCCGTGCCGTGCTA 61.945 57.895 7.46 7.46 38.99 3.49
226 227 2.845752 TTTAGCCCGTGCCGTGCTAG 62.846 60.000 10.45 0.00 42.72 3.42
268 269 2.501128 GCACGAGCCAGATAGCCA 59.499 61.111 0.00 0.00 33.58 4.75
269 270 1.593750 GCACGAGCCAGATAGCCAG 60.594 63.158 0.00 0.00 33.58 4.85
270 271 1.068753 CACGAGCCAGATAGCCAGG 59.931 63.158 0.00 0.00 0.00 4.45
271 272 1.381872 ACGAGCCAGATAGCCAGGT 60.382 57.895 0.00 0.00 0.00 4.00
272 273 1.365633 CGAGCCAGATAGCCAGGTC 59.634 63.158 0.00 0.00 0.00 3.85
273 274 1.112315 CGAGCCAGATAGCCAGGTCT 61.112 60.000 0.00 0.00 0.00 3.85
274 275 0.392336 GAGCCAGATAGCCAGGTCTG 59.608 60.000 0.00 0.00 41.13 3.51
275 276 1.227793 GCCAGATAGCCAGGTCTGC 60.228 63.158 0.66 0.00 40.34 4.26
276 277 1.449353 CCAGATAGCCAGGTCTGCC 59.551 63.158 0.66 0.00 40.34 4.85
277 278 1.449353 CAGATAGCCAGGTCTGCCC 59.551 63.158 0.00 0.00 35.87 5.36
278 279 2.136878 AGATAGCCAGGTCTGCCCG 61.137 63.158 0.00 0.00 38.74 6.13
279 280 3.816367 GATAGCCAGGTCTGCCCGC 62.816 68.421 0.00 0.00 38.74 6.13
283 284 4.785453 CCAGGTCTGCCCGCTTCC 62.785 72.222 0.00 0.00 38.74 3.46
284 285 4.785453 CAGGTCTGCCCGCTTCCC 62.785 72.222 0.00 0.00 38.74 3.97
287 288 4.115199 GTCTGCCCGCTTCCCCAT 62.115 66.667 0.00 0.00 0.00 4.00
288 289 3.338250 TCTGCCCGCTTCCCCATT 61.338 61.111 0.00 0.00 0.00 3.16
289 290 2.362889 CTGCCCGCTTCCCCATTT 60.363 61.111 0.00 0.00 0.00 2.32
290 291 2.362375 TGCCCGCTTCCCCATTTC 60.362 61.111 0.00 0.00 0.00 2.17
291 292 2.362375 GCCCGCTTCCCCATTTCA 60.362 61.111 0.00 0.00 0.00 2.69
292 293 1.981853 GCCCGCTTCCCCATTTCAA 60.982 57.895 0.00 0.00 0.00 2.69
293 294 1.948721 GCCCGCTTCCCCATTTCAAG 61.949 60.000 0.00 0.00 0.00 3.02
294 295 1.322538 CCCGCTTCCCCATTTCAAGG 61.323 60.000 0.00 0.00 0.00 3.61
295 296 1.322538 CCGCTTCCCCATTTCAAGGG 61.323 60.000 0.00 0.00 46.36 3.95
305 306 3.397482 CCATTTCAAGGGAGATAGAGCG 58.603 50.000 0.00 0.00 29.54 5.03
306 307 2.604046 TTTCAAGGGAGATAGAGCGC 57.396 50.000 0.00 0.00 0.00 5.92
307 308 1.781786 TTCAAGGGAGATAGAGCGCT 58.218 50.000 11.27 11.27 0.00 5.92
308 309 1.035923 TCAAGGGAGATAGAGCGCTG 58.964 55.000 18.48 0.00 0.00 5.18
309 310 0.033228 CAAGGGAGATAGAGCGCTGG 59.967 60.000 18.48 0.00 0.00 4.85
310 311 1.118356 AAGGGAGATAGAGCGCTGGG 61.118 60.000 18.48 0.00 0.00 4.45
311 312 1.531840 GGGAGATAGAGCGCTGGGA 60.532 63.158 18.48 0.00 0.00 4.37
312 313 0.902516 GGGAGATAGAGCGCTGGGAT 60.903 60.000 18.48 4.49 0.00 3.85
313 314 0.246086 GGAGATAGAGCGCTGGGATG 59.754 60.000 18.48 0.00 0.00 3.51
314 315 0.246086 GAGATAGAGCGCTGGGATGG 59.754 60.000 18.48 0.00 0.00 3.51
315 316 0.178950 AGATAGAGCGCTGGGATGGA 60.179 55.000 18.48 0.00 0.00 3.41
316 317 0.246086 GATAGAGCGCTGGGATGGAG 59.754 60.000 18.48 0.00 0.00 3.86
317 318 1.190833 ATAGAGCGCTGGGATGGAGG 61.191 60.000 18.48 0.00 0.00 4.30
318 319 2.298335 TAGAGCGCTGGGATGGAGGA 62.298 60.000 18.48 0.00 0.00 3.71
319 320 3.160047 AGCGCTGGGATGGAGGAG 61.160 66.667 10.39 0.00 0.00 3.69
320 321 3.157252 GCGCTGGGATGGAGGAGA 61.157 66.667 0.00 0.00 0.00 3.71
321 322 3.136750 CGCTGGGATGGAGGAGAG 58.863 66.667 0.00 0.00 0.00 3.20
322 323 2.828145 GCTGGGATGGAGGAGAGC 59.172 66.667 0.00 0.00 0.00 4.09
323 324 2.817056 GCTGGGATGGAGGAGAGCC 61.817 68.421 0.00 0.00 0.00 4.70
324 325 2.444706 TGGGATGGAGGAGAGCCG 60.445 66.667 0.00 0.00 39.96 5.52
325 326 2.123251 GGGATGGAGGAGAGCCGA 60.123 66.667 0.00 0.00 39.96 5.54
326 327 2.206536 GGGATGGAGGAGAGCCGAG 61.207 68.421 0.00 0.00 39.96 4.63
327 328 2.206536 GGATGGAGGAGAGCCGAGG 61.207 68.421 0.00 0.00 39.96 4.63
328 329 2.123077 ATGGAGGAGAGCCGAGGG 60.123 66.667 0.00 0.00 39.96 4.30
329 330 2.648613 GATGGAGGAGAGCCGAGGGA 62.649 65.000 0.00 0.00 39.96 4.20
330 331 2.520741 GGAGGAGAGCCGAGGGAG 60.521 72.222 0.00 0.00 39.96 4.30
331 332 2.598467 GAGGAGAGCCGAGGGAGA 59.402 66.667 0.00 0.00 39.96 3.71
332 333 1.528309 GAGGAGAGCCGAGGGAGAG 60.528 68.421 0.00 0.00 39.96 3.20
333 334 1.990160 GAGGAGAGCCGAGGGAGAGA 61.990 65.000 0.00 0.00 39.96 3.10
334 335 1.528309 GGAGAGCCGAGGGAGAGAG 60.528 68.421 0.00 0.00 0.00 3.20
335 336 1.529796 GAGAGCCGAGGGAGAGAGA 59.470 63.158 0.00 0.00 0.00 3.10
336 337 0.535102 GAGAGCCGAGGGAGAGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
337 338 0.986019 AGAGCCGAGGGAGAGAGAGA 60.986 60.000 0.00 0.00 0.00 3.10
338 339 0.535102 GAGCCGAGGGAGAGAGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
339 340 0.986019 AGCCGAGGGAGAGAGAGAGA 60.986 60.000 0.00 0.00 0.00 3.10
340 341 0.535102 GCCGAGGGAGAGAGAGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
341 342 0.535102 CCGAGGGAGAGAGAGAGAGC 60.535 65.000 0.00 0.00 0.00 4.09
342 343 0.535102 CGAGGGAGAGAGAGAGAGCC 60.535 65.000 0.00 0.00 0.00 4.70
343 344 0.178990 GAGGGAGAGAGAGAGAGCCC 60.179 65.000 0.00 0.00 35.79 5.19
344 345 1.528309 GGGAGAGAGAGAGAGCCCG 60.528 68.421 0.00 0.00 0.00 6.13
345 346 1.528309 GGAGAGAGAGAGAGCCCGG 60.528 68.421 0.00 0.00 0.00 5.73
346 347 1.528309 GAGAGAGAGAGAGCCCGGG 60.528 68.421 19.09 19.09 0.00 5.73
347 348 2.520741 GAGAGAGAGAGCCCGGGG 60.521 72.222 25.28 9.31 0.00 5.73
348 349 3.024356 AGAGAGAGAGCCCGGGGA 61.024 66.667 25.28 0.00 0.00 4.81
349 350 2.042843 GAGAGAGAGCCCGGGGAA 60.043 66.667 25.28 0.00 0.00 3.97
350 351 2.042435 AGAGAGAGCCCGGGGAAG 60.042 66.667 25.28 0.00 0.00 3.46
351 352 3.855853 GAGAGAGCCCGGGGAAGC 61.856 72.222 25.28 7.61 0.00 3.86
352 353 4.406763 AGAGAGCCCGGGGAAGCT 62.407 66.667 25.28 13.41 43.55 3.74
357 358 4.918201 GCCCGGGGAAGCTCGATG 62.918 72.222 25.28 0.00 0.00 3.84
358 359 3.154473 CCCGGGGAAGCTCGATGA 61.154 66.667 14.71 0.00 0.00 2.92
359 360 2.731571 CCCGGGGAAGCTCGATGAA 61.732 63.158 14.71 0.00 0.00 2.57
360 361 1.227380 CCGGGGAAGCTCGATGAAG 60.227 63.158 0.00 0.00 0.00 3.02
361 362 1.676678 CCGGGGAAGCTCGATGAAGA 61.677 60.000 0.00 0.00 0.00 2.87
362 363 0.249238 CGGGGAAGCTCGATGAAGAG 60.249 60.000 0.00 0.00 41.03 2.85
363 364 1.115467 GGGGAAGCTCGATGAAGAGA 58.885 55.000 0.00 0.00 40.57 3.10
364 365 1.068434 GGGGAAGCTCGATGAAGAGAG 59.932 57.143 0.00 0.00 40.57 3.20
365 366 1.068434 GGGAAGCTCGATGAAGAGAGG 59.932 57.143 0.00 0.00 40.57 3.69
366 367 1.068434 GGAAGCTCGATGAAGAGAGGG 59.932 57.143 0.00 0.00 40.57 4.30
367 368 2.028130 GAAGCTCGATGAAGAGAGGGA 58.972 52.381 0.00 0.00 40.57 4.20
368 369 1.691196 AGCTCGATGAAGAGAGGGAG 58.309 55.000 0.00 0.00 40.57 4.30
369 370 1.214175 AGCTCGATGAAGAGAGGGAGA 59.786 52.381 0.00 0.00 40.57 3.71
370 371 1.336755 GCTCGATGAAGAGAGGGAGAC 59.663 57.143 0.00 0.00 40.57 3.36
371 372 1.601903 CTCGATGAAGAGAGGGAGACG 59.398 57.143 0.00 0.00 40.57 4.18
372 373 1.209747 TCGATGAAGAGAGGGAGACGA 59.790 52.381 0.00 0.00 0.00 4.20
373 374 1.601903 CGATGAAGAGAGGGAGACGAG 59.398 57.143 0.00 0.00 0.00 4.18
374 375 1.953686 GATGAAGAGAGGGAGACGAGG 59.046 57.143 0.00 0.00 0.00 4.63
375 376 0.699399 TGAAGAGAGGGAGACGAGGT 59.301 55.000 0.00 0.00 0.00 3.85
376 377 1.340211 TGAAGAGAGGGAGACGAGGTC 60.340 57.143 0.00 0.00 0.00 3.85
377 378 0.699399 AAGAGAGGGAGACGAGGTCA 59.301 55.000 0.00 0.00 34.60 4.02
378 379 0.699399 AGAGAGGGAGACGAGGTCAA 59.301 55.000 0.00 0.00 34.60 3.18
379 380 1.286553 AGAGAGGGAGACGAGGTCAAT 59.713 52.381 0.00 0.00 34.60 2.57
380 381 2.104170 GAGAGGGAGACGAGGTCAATT 58.896 52.381 0.00 0.00 34.60 2.32
381 382 2.100087 GAGAGGGAGACGAGGTCAATTC 59.900 54.545 0.00 0.00 34.60 2.17
382 383 1.825474 GAGGGAGACGAGGTCAATTCA 59.175 52.381 0.00 0.00 34.60 2.57
383 384 2.233922 GAGGGAGACGAGGTCAATTCAA 59.766 50.000 0.00 0.00 34.60 2.69
384 385 2.840651 AGGGAGACGAGGTCAATTCAAT 59.159 45.455 0.00 0.00 34.60 2.57
385 386 2.939103 GGGAGACGAGGTCAATTCAATG 59.061 50.000 0.00 0.00 34.60 2.82
386 387 2.939103 GGAGACGAGGTCAATTCAATGG 59.061 50.000 0.00 0.00 34.60 3.16
387 388 3.369471 GGAGACGAGGTCAATTCAATGGA 60.369 47.826 0.00 0.00 34.60 3.41
388 389 3.600388 AGACGAGGTCAATTCAATGGAC 58.400 45.455 0.00 0.00 34.60 4.02
396 397 4.747810 GTCAATTCAATGGACCAACATCC 58.252 43.478 0.00 0.00 39.45 3.51
406 407 5.975693 TGGACCAACATCCAAATAGAAAC 57.024 39.130 0.00 0.00 46.08 2.78
407 408 4.457603 TGGACCAACATCCAAATAGAAACG 59.542 41.667 0.00 0.00 46.08 3.60
408 409 4.698304 GGACCAACATCCAAATAGAAACGA 59.302 41.667 0.00 0.00 38.77 3.85
409 410 5.182380 GGACCAACATCCAAATAGAAACGAA 59.818 40.000 0.00 0.00 38.77 3.85
410 411 6.294286 GGACCAACATCCAAATAGAAACGAAA 60.294 38.462 0.00 0.00 38.77 3.46
411 412 7.227049 ACCAACATCCAAATAGAAACGAAAT 57.773 32.000 0.00 0.00 0.00 2.17
412 413 7.666623 ACCAACATCCAAATAGAAACGAAATT 58.333 30.769 0.00 0.00 0.00 1.82
413 414 7.598493 ACCAACATCCAAATAGAAACGAAATTG 59.402 33.333 0.00 0.00 0.00 2.32
414 415 7.411804 CCAACATCCAAATAGAAACGAAATTGC 60.412 37.037 0.00 0.00 0.00 3.56
415 416 6.924111 ACATCCAAATAGAAACGAAATTGCT 58.076 32.000 0.00 0.00 0.00 3.91
416 417 6.808212 ACATCCAAATAGAAACGAAATTGCTG 59.192 34.615 0.00 0.00 0.00 4.41
417 418 5.160641 TCCAAATAGAAACGAAATTGCTGC 58.839 37.500 0.00 0.00 0.00 5.25
418 419 4.922692 CCAAATAGAAACGAAATTGCTGCA 59.077 37.500 0.00 0.00 0.00 4.41
419 420 5.577945 CCAAATAGAAACGAAATTGCTGCAT 59.422 36.000 1.84 0.00 0.00 3.96
420 421 6.751425 CCAAATAGAAACGAAATTGCTGCATA 59.249 34.615 1.84 0.00 0.00 3.14
421 422 7.043854 CCAAATAGAAACGAAATTGCTGCATAG 60.044 37.037 1.84 0.00 0.00 2.23
422 423 6.925610 ATAGAAACGAAATTGCTGCATAGA 57.074 33.333 1.84 0.00 0.00 1.98
423 424 4.974591 AGAAACGAAATTGCTGCATAGAC 58.025 39.130 1.84 0.00 0.00 2.59
424 425 4.455533 AGAAACGAAATTGCTGCATAGACA 59.544 37.500 1.84 0.00 0.00 3.41
425 426 4.970662 AACGAAATTGCTGCATAGACAT 57.029 36.364 1.84 0.00 0.00 3.06
426 427 4.282950 ACGAAATTGCTGCATAGACATG 57.717 40.909 1.84 0.00 35.07 3.21
436 437 0.947244 CATAGACATGCTTTCCGCCC 59.053 55.000 0.00 0.00 38.05 6.13
437 438 0.532862 ATAGACATGCTTTCCGCCCG 60.533 55.000 0.00 0.00 38.05 6.13
438 439 1.609635 TAGACATGCTTTCCGCCCGA 61.610 55.000 0.00 0.00 38.05 5.14
439 440 1.819632 GACATGCTTTCCGCCCGAT 60.820 57.895 0.00 0.00 38.05 4.18
440 441 1.776034 GACATGCTTTCCGCCCGATC 61.776 60.000 0.00 0.00 38.05 3.69
441 442 1.524621 CATGCTTTCCGCCCGATCT 60.525 57.895 0.00 0.00 38.05 2.75
442 443 1.524621 ATGCTTTCCGCCCGATCTG 60.525 57.895 0.00 0.00 38.05 2.90
443 444 1.971505 ATGCTTTCCGCCCGATCTGA 61.972 55.000 0.00 0.00 38.05 3.27
444 445 1.884926 GCTTTCCGCCCGATCTGAG 60.885 63.158 0.00 0.00 0.00 3.35
445 446 1.816537 CTTTCCGCCCGATCTGAGA 59.183 57.895 0.00 0.00 0.00 3.27
446 447 0.175760 CTTTCCGCCCGATCTGAGAA 59.824 55.000 0.00 0.00 0.00 2.87
447 448 0.108329 TTTCCGCCCGATCTGAGAAC 60.108 55.000 0.00 0.00 0.00 3.01
448 449 2.278857 CCGCCCGATCTGAGAACG 60.279 66.667 5.06 5.06 0.00 3.95
449 450 2.278857 CGCCCGATCTGAGAACGG 60.279 66.667 22.32 22.32 45.41 4.44
450 451 2.893398 GCCCGATCTGAGAACGGT 59.107 61.111 25.97 0.00 44.57 4.83
451 452 1.721664 CGCCCGATCTGAGAACGGTA 61.722 60.000 25.97 0.00 44.57 4.02
452 453 0.248949 GCCCGATCTGAGAACGGTAC 60.249 60.000 25.97 15.87 44.57 3.34
453 454 1.390565 CCCGATCTGAGAACGGTACT 58.609 55.000 25.97 0.00 44.57 2.73
454 455 1.749634 CCCGATCTGAGAACGGTACTT 59.250 52.381 25.97 0.00 44.57 2.24
455 456 2.223525 CCCGATCTGAGAACGGTACTTC 60.224 54.545 25.97 0.00 44.57 3.01
456 457 2.422479 CCGATCTGAGAACGGTACTTCA 59.578 50.000 21.21 0.00 41.86 3.02
457 458 3.066900 CCGATCTGAGAACGGTACTTCAT 59.933 47.826 21.21 0.00 41.86 2.57
458 459 4.440250 CCGATCTGAGAACGGTACTTCATT 60.440 45.833 21.21 0.00 41.86 2.57
459 460 4.735822 CGATCTGAGAACGGTACTTCATTC 59.264 45.833 4.06 0.00 0.00 2.67
460 461 4.092771 TCTGAGAACGGTACTTCATTCG 57.907 45.455 0.00 0.00 0.00 3.34
461 462 2.599082 CTGAGAACGGTACTTCATTCGC 59.401 50.000 0.00 0.00 0.00 4.70
462 463 1.582502 GAGAACGGTACTTCATTCGCG 59.417 52.381 0.00 0.00 0.00 5.87
463 464 1.068055 AGAACGGTACTTCATTCGCGT 60.068 47.619 5.77 0.00 0.00 6.01
464 465 1.319669 GAACGGTACTTCATTCGCGTC 59.680 52.381 5.77 0.00 0.00 5.19
465 466 0.457337 ACGGTACTTCATTCGCGTCC 60.457 55.000 5.77 0.00 0.00 4.79
466 467 0.457166 CGGTACTTCATTCGCGTCCA 60.457 55.000 5.77 0.00 0.00 4.02
467 468 1.717194 GGTACTTCATTCGCGTCCAA 58.283 50.000 5.77 0.00 0.00 3.53
468 469 2.070783 GGTACTTCATTCGCGTCCAAA 58.929 47.619 5.77 0.00 0.00 3.28
469 470 2.676342 GGTACTTCATTCGCGTCCAAAT 59.324 45.455 5.77 0.00 0.00 2.32
470 471 3.242316 GGTACTTCATTCGCGTCCAAATC 60.242 47.826 5.77 0.00 0.00 2.17
471 472 2.699954 ACTTCATTCGCGTCCAAATCT 58.300 42.857 5.77 0.00 0.00 2.40
472 473 2.673368 ACTTCATTCGCGTCCAAATCTC 59.327 45.455 5.77 0.00 0.00 2.75
473 474 1.277326 TCATTCGCGTCCAAATCTCG 58.723 50.000 5.77 0.00 0.00 4.04
474 475 0.999406 CATTCGCGTCCAAATCTCGT 59.001 50.000 5.77 0.00 0.00 4.18
475 476 0.999406 ATTCGCGTCCAAATCTCGTG 59.001 50.000 5.77 0.00 36.60 4.35
476 477 0.038983 TTCGCGTCCAAATCTCGTGA 60.039 50.000 5.77 0.00 41.18 4.35
477 478 0.456142 TCGCGTCCAAATCTCGTGAG 60.456 55.000 5.77 0.00 38.76 3.51
478 479 0.732880 CGCGTCCAAATCTCGTGAGT 60.733 55.000 0.00 0.00 37.28 3.41
479 480 0.716108 GCGTCCAAATCTCGTGAGTG 59.284 55.000 0.00 0.00 0.00 3.51
480 481 0.716108 CGTCCAAATCTCGTGAGTGC 59.284 55.000 0.00 0.00 0.00 4.40
481 482 1.795768 GTCCAAATCTCGTGAGTGCA 58.204 50.000 0.00 0.00 0.00 4.57
482 483 1.461127 GTCCAAATCTCGTGAGTGCAC 59.539 52.381 9.40 9.40 41.67 4.57
490 491 3.771491 GTGAGTGCACGCTCGCTG 61.771 66.667 21.44 0.00 41.37 5.18
491 492 4.284860 TGAGTGCACGCTCGCTGT 62.285 61.111 21.44 0.00 38.28 4.40
492 493 3.771491 GAGTGCACGCTCGCTGTG 61.771 66.667 13.84 8.70 40.32 3.66
493 494 4.284860 AGTGCACGCTCGCTGTGA 62.285 61.111 12.01 0.00 39.73 3.58
494 495 4.064491 GTGCACGCTCGCTGTGAC 62.064 66.667 0.00 8.59 39.73 3.67
504 505 3.114616 GCTGTGACGCTGCGATGT 61.115 61.111 30.47 6.12 32.54 3.06
505 506 1.805539 GCTGTGACGCTGCGATGTA 60.806 57.895 30.47 10.97 32.54 2.29
506 507 1.746727 GCTGTGACGCTGCGATGTAG 61.747 60.000 30.47 20.07 32.54 2.74
507 508 0.456824 CTGTGACGCTGCGATGTAGT 60.457 55.000 30.47 4.33 0.00 2.73
508 509 0.806241 TGTGACGCTGCGATGTAGTA 59.194 50.000 30.47 5.08 0.00 1.82
509 510 1.404035 TGTGACGCTGCGATGTAGTAT 59.596 47.619 30.47 2.56 0.00 2.12
510 511 2.044860 GTGACGCTGCGATGTAGTATC 58.955 52.381 30.47 13.34 0.00 2.24
511 512 1.319172 GACGCTGCGATGTAGTATCG 58.681 55.000 30.47 5.04 43.72 2.92
512 513 0.661552 ACGCTGCGATGTAGTATCGT 59.338 50.000 30.47 0.00 42.90 3.73
513 514 1.065102 ACGCTGCGATGTAGTATCGTT 59.935 47.619 30.47 0.00 42.90 3.85
514 515 2.117137 CGCTGCGATGTAGTATCGTTT 58.883 47.619 18.66 0.00 42.90 3.60
515 516 3.242837 ACGCTGCGATGTAGTATCGTTTA 60.243 43.478 30.47 0.00 42.90 2.01
516 517 3.358115 CGCTGCGATGTAGTATCGTTTAG 59.642 47.826 18.66 8.03 42.90 1.85
517 518 3.669122 GCTGCGATGTAGTATCGTTTAGG 59.331 47.826 10.49 0.17 42.90 2.69
518 519 3.635331 TGCGATGTAGTATCGTTTAGGC 58.365 45.455 10.49 0.00 42.90 3.93
519 520 3.067040 TGCGATGTAGTATCGTTTAGGCA 59.933 43.478 10.49 0.00 42.90 4.75
520 521 4.235360 GCGATGTAGTATCGTTTAGGCAT 58.765 43.478 10.49 0.00 42.90 4.40
521 522 4.684703 GCGATGTAGTATCGTTTAGGCATT 59.315 41.667 10.49 0.00 42.90 3.56
522 523 5.388475 GCGATGTAGTATCGTTTAGGCATTG 60.388 44.000 10.49 0.00 42.90 2.82
526 527 3.206150 AGTATCGTTTAGGCATTGGCTG 58.794 45.455 21.95 6.01 39.30 4.85
535 536 5.890424 TTAGGCATTGGCTGTAAGTTTAC 57.110 39.130 21.95 0.00 39.30 2.01
536 537 3.089284 AGGCATTGGCTGTAAGTTTACC 58.911 45.455 12.53 0.00 40.87 2.85
538 539 3.366985 GGCATTGGCTGTAAGTTTACCAC 60.367 47.826 2.42 0.00 40.87 4.16
539 540 3.669557 GCATTGGCTGTAAGTTTACCACG 60.670 47.826 0.00 0.00 36.96 4.94
541 542 2.485903 TGGCTGTAAGTTTACCACGTG 58.514 47.619 9.08 9.08 35.30 4.49
551 552 2.197792 TTACCACGTGTATAGCAGCG 57.802 50.000 15.65 0.00 0.00 5.18
556 557 0.172578 ACGTGTATAGCAGCGCTCAA 59.827 50.000 7.13 0.00 40.44 3.02
567 569 2.533129 GCAGCGCTCAAATAGAAAATGC 59.467 45.455 7.13 0.00 0.00 3.56
591 593 1.886542 GACACCCACTTCATTCCAACC 59.113 52.381 0.00 0.00 0.00 3.77
601 603 4.021719 ACTTCATTCCAACCAGCAATTCTG 60.022 41.667 0.00 0.00 42.49 3.02
613 615 4.143030 CCAGCAATTCTGTCTACAACGAAG 60.143 45.833 0.00 0.00 41.25 3.79
651 657 9.394477 GAATTCAAGTCATTTAGTACCAACAAC 57.606 33.333 0.00 0.00 0.00 3.32
681 687 9.830975 AATTCAAGCCACTTTTTAAAACATACT 57.169 25.926 0.00 0.00 0.00 2.12
686 692 6.071560 AGCCACTTTTTAAAACATACTAGGCC 60.072 38.462 0.00 0.00 36.61 5.19
691 698 8.241367 ACTTTTTAAAACATACTAGGCCGAATG 58.759 33.333 0.00 2.48 0.00 2.67
735 748 2.093921 TCGTATCCTGGACGATGCAAAA 60.094 45.455 6.54 0.00 43.99 2.44
1249 1281 3.685139 TCCTCTTGTGTTGGACAGATC 57.315 47.619 0.00 0.00 35.44 2.75
1455 1489 1.676967 GTGCTGCTCCCCAAGAAGG 60.677 63.158 0.00 0.00 30.16 3.46
1579 1632 2.733298 TCCCCATAGCCTAGCCATTA 57.267 50.000 0.00 0.00 0.00 1.90
1649 1702 1.751924 GTGCCTGGTAGTCTCTAGTGG 59.248 57.143 0.00 0.00 0.00 4.00
1654 1707 1.342076 TGGTAGTCTCTAGTGGCCCTG 60.342 57.143 0.00 0.00 0.00 4.45
1655 1708 1.063867 GGTAGTCTCTAGTGGCCCTGA 60.064 57.143 0.00 0.00 0.00 3.86
1656 1709 2.623502 GGTAGTCTCTAGTGGCCCTGAA 60.624 54.545 0.00 0.00 0.00 3.02
1658 1711 1.359474 AGTCTCTAGTGGCCCTGAAGA 59.641 52.381 0.00 2.09 0.00 2.87
1659 1712 2.023501 AGTCTCTAGTGGCCCTGAAGAT 60.024 50.000 0.00 0.00 0.00 2.40
1660 1713 2.102252 GTCTCTAGTGGCCCTGAAGATG 59.898 54.545 0.00 0.00 0.00 2.90
1682 1775 6.780457 TGGTGTGGGAAATACTAGTACTAC 57.220 41.667 4.31 1.47 0.00 2.73
1683 1776 6.496743 TGGTGTGGGAAATACTAGTACTACT 58.503 40.000 4.31 0.00 0.00 2.57
1684 1777 6.379133 TGGTGTGGGAAATACTAGTACTACTG 59.621 42.308 4.31 0.00 0.00 2.74
1779 1872 1.473258 TGCTTGACACCTGCTTTTGT 58.527 45.000 0.00 0.00 0.00 2.83
1865 1968 2.910319 TCCCCTTGCTCTTTGCTTACTA 59.090 45.455 0.00 0.00 43.37 1.82
1896 1999 3.844211 AGGGTACTCAATTTCAGGCACTA 59.156 43.478 0.00 0.00 36.02 2.74
1911 2014 9.461312 TTTCAGGCACTAATCTTATGTTATGTT 57.539 29.630 0.00 0.00 36.02 2.71
1937 2041 9.150028 TGATCACCCAATCATATTTCAATCAAT 57.850 29.630 0.00 0.00 30.76 2.57
2076 2254 3.055530 ACCACAAACCACAAATTGCAGAA 60.056 39.130 0.00 0.00 0.00 3.02
2083 2261 8.901793 ACAAACCACAAATTGCAGAAAATTTAT 58.098 25.926 0.00 0.00 37.59 1.40
2084 2262 9.384682 CAAACCACAAATTGCAGAAAATTTATC 57.615 29.630 0.00 0.00 37.59 1.75
2087 2265 7.603784 ACCACAAATTGCAGAAAATTTATCCTC 59.396 33.333 0.00 0.00 37.59 3.71
2089 2267 8.653338 CACAAATTGCAGAAAATTTATCCTCTG 58.347 33.333 11.62 11.62 37.59 3.35
2098 2276 8.359642 CAGAAAATTTATCCTCTGAAACCACAA 58.640 33.333 10.77 0.00 38.02 3.33
2100 2278 9.196552 GAAAATTTATCCTCTGAAACCACAAAG 57.803 33.333 0.00 0.00 0.00 2.77
2143 2327 7.062605 TGCTACGTAGATGCAAACTAAACTAAC 59.937 37.037 26.53 2.28 36.58 2.34
2144 2328 7.275123 GCTACGTAGATGCAAACTAAACTAACT 59.725 37.037 26.53 0.00 0.00 2.24
2145 2329 9.778993 CTACGTAGATGCAAACTAAACTAACTA 57.221 33.333 17.95 0.00 0.00 2.24
2166 2350 6.913170 ACTAGCCAGAAACACATGTTATTTG 58.087 36.000 9.13 0.00 37.25 2.32
2177 2390 6.186957 ACACATGTTATTTGGATGCTAGGAA 58.813 36.000 0.00 0.00 0.00 3.36
2180 2393 4.792068 TGTTATTTGGATGCTAGGAAGGG 58.208 43.478 0.00 0.00 0.00 3.95
2181 2394 2.371658 ATTTGGATGCTAGGAAGGGC 57.628 50.000 0.00 0.00 0.00 5.19
2205 2418 8.854117 GGCCAGATTAAACAGAGATGATTAAAT 58.146 33.333 0.00 0.00 0.00 1.40
2207 2420 9.674824 CCAGATTAAACAGAGATGATTAAATGC 57.325 33.333 0.00 0.00 0.00 3.56
2312 2531 0.457853 CATCAACACATGCAGCAGCC 60.458 55.000 0.00 0.00 41.13 4.85
2318 2537 1.001269 ACATGCAGCAGCCTCACAT 60.001 52.632 0.00 0.00 41.13 3.21
2322 2541 1.214589 GCAGCAGCCTCACATTTGG 59.785 57.895 0.00 0.00 33.58 3.28
2331 2550 2.893489 GCCTCACATTTGGGGGATTATC 59.107 50.000 0.00 0.00 44.87 1.75
2346 2565 4.264172 GGGATTATCTAGAGCTGGAGAGGA 60.264 50.000 0.00 0.00 0.00 3.71
2383 2602 8.689972 ACCTTCTGAATATAATTCCAGCAAAAG 58.310 33.333 0.00 0.00 0.00 2.27
2399 2618 6.145535 CAGCAAAAGAACTCATGTAGAAACC 58.854 40.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.068753 CTAGGCCGAGGAGCACATG 59.931 63.158 4.68 0.00 0.00 3.21
1 2 2.136878 CCTAGGCCGAGGAGCACAT 61.137 63.158 26.87 0.00 39.15 3.21
2 3 2.759973 CCTAGGCCGAGGAGCACA 60.760 66.667 26.87 0.00 39.15 4.57
3 4 4.228567 GCCTAGGCCGAGGAGCAC 62.229 72.222 33.93 13.45 39.15 4.40
4 5 4.777854 TGCCTAGGCCGAGGAGCA 62.778 66.667 33.93 22.29 39.15 4.26
5 6 4.228567 GTGCCTAGGCCGAGGAGC 62.229 72.222 33.93 20.82 39.15 4.70
6 7 3.905678 CGTGCCTAGGCCGAGGAG 61.906 72.222 33.93 19.77 39.15 3.69
7 8 4.435970 TCGTGCCTAGGCCGAGGA 62.436 66.667 33.93 22.24 39.15 3.71
8 9 4.208686 GTCGTGCCTAGGCCGAGG 62.209 72.222 33.68 26.62 41.59 4.63
9 10 3.449227 TGTCGTGCCTAGGCCGAG 61.449 66.667 33.68 24.04 41.59 4.63
10 11 3.755628 GTGTCGTGCCTAGGCCGA 61.756 66.667 31.10 31.10 39.85 5.54
11 12 2.852495 AATGTGTCGTGCCTAGGCCG 62.852 60.000 30.81 29.41 41.09 6.13
12 13 0.676782 AAATGTGTCGTGCCTAGGCC 60.677 55.000 30.81 20.08 41.09 5.19
13 14 1.933853 CTAAATGTGTCGTGCCTAGGC 59.066 52.381 27.71 27.71 42.35 3.93
14 15 1.933853 GCTAAATGTGTCGTGCCTAGG 59.066 52.381 3.67 3.67 0.00 3.02
15 16 2.616960 TGCTAAATGTGTCGTGCCTAG 58.383 47.619 0.00 0.00 0.00 3.02
16 17 2.753055 TGCTAAATGTGTCGTGCCTA 57.247 45.000 0.00 0.00 0.00 3.93
17 18 1.890876 TTGCTAAATGTGTCGTGCCT 58.109 45.000 0.00 0.00 0.00 4.75
18 19 2.697431 TTTGCTAAATGTGTCGTGCC 57.303 45.000 0.00 0.00 0.00 5.01
19 20 2.400408 CGTTTTGCTAAATGTGTCGTGC 59.600 45.455 4.87 0.00 0.00 5.34
20 21 2.970609 CCGTTTTGCTAAATGTGTCGTG 59.029 45.455 11.12 0.00 0.00 4.35
21 22 2.031508 CCCGTTTTGCTAAATGTGTCGT 60.032 45.455 11.12 0.00 0.00 4.34
22 23 2.031508 ACCCGTTTTGCTAAATGTGTCG 60.032 45.455 11.12 3.50 0.00 4.35
23 24 3.561503 GACCCGTTTTGCTAAATGTGTC 58.438 45.455 11.23 11.23 32.90 3.67
24 25 2.031508 CGACCCGTTTTGCTAAATGTGT 60.032 45.455 11.12 6.41 0.00 3.72
25 26 2.031508 ACGACCCGTTTTGCTAAATGTG 60.032 45.455 11.12 3.40 36.35 3.21
26 27 2.223745 ACGACCCGTTTTGCTAAATGT 58.776 42.857 11.12 3.35 36.35 2.71
27 28 2.413634 GGACGACCCGTTTTGCTAAATG 60.414 50.000 5.93 5.93 41.37 2.32
28 29 1.808343 GGACGACCCGTTTTGCTAAAT 59.192 47.619 0.00 0.00 41.37 1.40
29 30 1.228533 GGACGACCCGTTTTGCTAAA 58.771 50.000 0.00 0.00 41.37 1.85
30 31 2.917172 GGACGACCCGTTTTGCTAA 58.083 52.632 0.00 0.00 41.37 3.09
31 32 4.679412 GGACGACCCGTTTTGCTA 57.321 55.556 0.00 0.00 41.37 3.49
45 46 0.656785 TGTTAAACGTGTTGCGGGAC 59.343 50.000 0.00 0.00 46.52 4.46
46 47 0.656785 GTGTTAAACGTGTTGCGGGA 59.343 50.000 0.00 0.00 46.52 5.14
47 48 3.151848 GTGTTAAACGTGTTGCGGG 57.848 52.632 0.00 0.00 46.52 6.13
57 58 1.134560 TGTGGCCCAAACGTGTTAAAC 59.865 47.619 0.00 0.00 0.00 2.01
58 59 1.471119 TGTGGCCCAAACGTGTTAAA 58.529 45.000 0.00 0.00 0.00 1.52
59 60 1.338337 CATGTGGCCCAAACGTGTTAA 59.662 47.619 0.00 0.00 31.26 2.01
60 61 0.955178 CATGTGGCCCAAACGTGTTA 59.045 50.000 0.00 0.00 31.26 2.41
61 62 1.739049 CATGTGGCCCAAACGTGTT 59.261 52.632 0.00 0.00 31.26 3.32
62 63 2.855514 GCATGTGGCCCAAACGTGT 61.856 57.895 13.73 0.00 36.98 4.49
63 64 2.049248 GCATGTGGCCCAAACGTG 60.049 61.111 0.00 4.74 37.56 4.49
64 65 1.398958 AAAGCATGTGGCCCAAACGT 61.399 50.000 0.00 0.00 46.50 3.99
65 66 0.249826 AAAAGCATGTGGCCCAAACG 60.250 50.000 0.00 0.00 46.50 3.60
66 67 1.603326 CAAAAAGCATGTGGCCCAAAC 59.397 47.619 0.00 0.00 46.50 2.93
67 68 1.964552 CAAAAAGCATGTGGCCCAAA 58.035 45.000 0.00 0.00 46.50 3.28
68 69 0.534652 GCAAAAAGCATGTGGCCCAA 60.535 50.000 0.00 0.00 46.50 4.12
69 70 1.071128 GCAAAAAGCATGTGGCCCA 59.929 52.632 0.00 0.00 46.50 5.36
70 71 3.970721 GCAAAAAGCATGTGGCCC 58.029 55.556 0.00 0.00 46.50 5.80
79 80 4.777384 CCCAACAGGGCAAAAAGC 57.223 55.556 0.00 0.00 44.65 3.51
87 88 2.031870 GCCTAAAATAGCCCAACAGGG 58.968 52.381 0.00 0.00 46.03 4.45
88 89 2.031870 GGCCTAAAATAGCCCAACAGG 58.968 52.381 0.00 0.00 43.76 4.00
96 97 6.424812 CCAATAGCAAAATGGCCTAAAATAGC 59.575 38.462 3.32 0.00 0.00 2.97
97 98 6.930722 CCCAATAGCAAAATGGCCTAAAATAG 59.069 38.462 3.32 0.00 32.71 1.73
98 99 6.687647 GCCCAATAGCAAAATGGCCTAAAATA 60.688 38.462 3.32 0.00 32.74 1.40
99 100 5.683681 CCCAATAGCAAAATGGCCTAAAAT 58.316 37.500 3.32 0.00 32.71 1.82
100 101 4.625083 GCCCAATAGCAAAATGGCCTAAAA 60.625 41.667 3.32 0.00 32.74 1.52
101 102 3.118445 GCCCAATAGCAAAATGGCCTAAA 60.118 43.478 3.32 0.00 32.74 1.85
102 103 2.433970 GCCCAATAGCAAAATGGCCTAA 59.566 45.455 3.32 0.00 32.74 2.69
103 104 2.038659 GCCCAATAGCAAAATGGCCTA 58.961 47.619 3.32 0.00 32.74 3.93
104 105 0.832626 GCCCAATAGCAAAATGGCCT 59.167 50.000 3.32 0.00 32.74 5.19
105 106 0.832626 AGCCCAATAGCAAAATGGCC 59.167 50.000 0.00 0.00 39.72 5.36
106 107 1.207811 ACAGCCCAATAGCAAAATGGC 59.792 47.619 0.00 0.00 39.17 4.40
107 108 3.615224 AACAGCCCAATAGCAAAATGG 57.385 42.857 0.00 0.00 34.23 3.16
108 109 5.945466 AAAAACAGCCCAATAGCAAAATG 57.055 34.783 0.00 0.00 34.23 2.32
147 148 9.044150 CACATGGACTGTTTATGTTTGATTTTT 57.956 29.630 0.00 0.00 35.29 1.94
148 149 7.171337 GCACATGGACTGTTTATGTTTGATTTT 59.829 33.333 0.00 0.00 35.29 1.82
149 150 6.646240 GCACATGGACTGTTTATGTTTGATTT 59.354 34.615 0.00 0.00 35.29 2.17
150 151 6.158598 GCACATGGACTGTTTATGTTTGATT 58.841 36.000 0.00 0.00 35.29 2.57
151 152 5.336690 GGCACATGGACTGTTTATGTTTGAT 60.337 40.000 0.00 0.00 35.29 2.57
152 153 4.022416 GGCACATGGACTGTTTATGTTTGA 60.022 41.667 0.00 0.00 35.29 2.69
153 154 4.236935 GGCACATGGACTGTTTATGTTTG 58.763 43.478 0.00 1.77 35.29 2.93
154 155 3.258123 GGGCACATGGACTGTTTATGTTT 59.742 43.478 0.00 0.00 35.29 2.83
155 156 2.825532 GGGCACATGGACTGTTTATGTT 59.174 45.455 0.00 0.00 35.29 2.71
156 157 2.224992 TGGGCACATGGACTGTTTATGT 60.225 45.455 0.00 5.40 35.29 2.29
157 158 2.424601 CTGGGCACATGGACTGTTTATG 59.575 50.000 0.00 4.36 35.29 1.90
158 159 2.726821 CTGGGCACATGGACTGTTTAT 58.273 47.619 0.00 0.00 35.29 1.40
159 160 1.886222 GCTGGGCACATGGACTGTTTA 60.886 52.381 0.00 0.00 35.29 2.01
160 161 1.181098 GCTGGGCACATGGACTGTTT 61.181 55.000 0.00 0.00 35.29 2.83
161 162 1.604593 GCTGGGCACATGGACTGTT 60.605 57.895 0.00 0.00 35.29 3.16
162 163 2.034687 GCTGGGCACATGGACTGT 59.965 61.111 0.00 0.00 39.20 3.55
163 164 2.753043 GGCTGGGCACATGGACTG 60.753 66.667 0.00 0.00 0.00 3.51
164 165 2.937689 AGGCTGGGCACATGGACT 60.938 61.111 0.00 0.00 0.00 3.85
165 166 2.439156 GAGGCTGGGCACATGGAC 60.439 66.667 0.00 0.00 0.00 4.02
166 167 2.934932 TGAGGCTGGGCACATGGA 60.935 61.111 0.00 0.00 0.00 3.41
167 168 2.753043 GTGAGGCTGGGCACATGG 60.753 66.667 0.00 0.00 35.19 3.66
168 169 3.129502 CGTGAGGCTGGGCACATG 61.130 66.667 0.00 0.00 34.78 3.21
180 181 2.280524 TCGTGTTTGGGCCGTGAG 60.281 61.111 0.00 0.00 0.00 3.51
181 182 2.589442 GTCGTGTTTGGGCCGTGA 60.589 61.111 0.00 0.00 0.00 4.35
182 183 3.656045 GGTCGTGTTTGGGCCGTG 61.656 66.667 0.00 0.00 0.00 4.94
183 184 4.941309 GGGTCGTGTTTGGGCCGT 62.941 66.667 0.00 0.00 0.00 5.68
184 185 4.636435 AGGGTCGTGTTTGGGCCG 62.636 66.667 0.00 0.00 0.00 6.13
185 186 2.983592 CAGGGTCGTGTTTGGGCC 60.984 66.667 0.00 0.00 0.00 5.80
186 187 2.983592 CCAGGGTCGTGTTTGGGC 60.984 66.667 0.00 0.00 0.00 5.36
187 188 2.983592 GCCAGGGTCGTGTTTGGG 60.984 66.667 0.00 0.00 0.00 4.12
188 189 3.353836 CGCCAGGGTCGTGTTTGG 61.354 66.667 0.00 0.00 0.00 3.28
189 190 3.353836 CCGCCAGGGTCGTGTTTG 61.354 66.667 0.00 0.00 0.00 2.93
239 240 4.854924 TCGTGCCATCCATGCCGG 62.855 66.667 0.00 0.00 0.00 6.13
240 241 3.274586 CTCGTGCCATCCATGCCG 61.275 66.667 0.00 0.00 0.00 5.69
241 242 3.589881 GCTCGTGCCATCCATGCC 61.590 66.667 0.00 0.00 0.00 4.40
251 252 1.593750 CTGGCTATCTGGCTCGTGC 60.594 63.158 0.00 0.00 42.34 5.34
252 253 1.068753 CCTGGCTATCTGGCTCGTG 59.931 63.158 0.00 0.00 42.34 4.35
253 254 1.381872 ACCTGGCTATCTGGCTCGT 60.382 57.895 0.00 0.00 42.34 4.18
254 255 1.112315 AGACCTGGCTATCTGGCTCG 61.112 60.000 0.00 0.00 42.34 5.03
255 256 0.392336 CAGACCTGGCTATCTGGCTC 59.608 60.000 5.18 0.00 38.97 4.70
256 257 1.694133 GCAGACCTGGCTATCTGGCT 61.694 60.000 12.97 0.00 42.25 4.75
257 258 1.227793 GCAGACCTGGCTATCTGGC 60.228 63.158 12.97 4.11 42.25 4.85
266 267 4.785453 GGAAGCGGGCAGACCTGG 62.785 72.222 0.00 0.00 43.31 4.45
267 268 4.785453 GGGAAGCGGGCAGACCTG 62.785 72.222 0.00 0.00 46.21 4.00
270 271 3.645268 AATGGGGAAGCGGGCAGAC 62.645 63.158 0.00 0.00 0.00 3.51
271 272 2.837031 GAAATGGGGAAGCGGGCAGA 62.837 60.000 0.00 0.00 0.00 4.26
272 273 2.362889 AAATGGGGAAGCGGGCAG 60.363 61.111 0.00 0.00 0.00 4.85
273 274 2.362375 GAAATGGGGAAGCGGGCA 60.362 61.111 0.00 0.00 0.00 5.36
274 275 1.948721 CTTGAAATGGGGAAGCGGGC 61.949 60.000 0.00 0.00 0.00 6.13
275 276 1.322538 CCTTGAAATGGGGAAGCGGG 61.323 60.000 0.00 0.00 0.00 6.13
276 277 2.192605 CCTTGAAATGGGGAAGCGG 58.807 57.895 0.00 0.00 0.00 5.52
284 285 3.397482 CGCTCTATCTCCCTTGAAATGG 58.603 50.000 0.00 0.00 0.00 3.16
285 286 2.805099 GCGCTCTATCTCCCTTGAAATG 59.195 50.000 0.00 0.00 0.00 2.32
286 287 2.703007 AGCGCTCTATCTCCCTTGAAAT 59.297 45.455 2.64 0.00 0.00 2.17
287 288 2.111384 AGCGCTCTATCTCCCTTGAAA 58.889 47.619 2.64 0.00 0.00 2.69
288 289 1.410517 CAGCGCTCTATCTCCCTTGAA 59.589 52.381 7.13 0.00 0.00 2.69
289 290 1.035923 CAGCGCTCTATCTCCCTTGA 58.964 55.000 7.13 0.00 0.00 3.02
290 291 0.033228 CCAGCGCTCTATCTCCCTTG 59.967 60.000 7.13 0.00 0.00 3.61
291 292 1.118356 CCCAGCGCTCTATCTCCCTT 61.118 60.000 7.13 0.00 0.00 3.95
292 293 1.532794 CCCAGCGCTCTATCTCCCT 60.533 63.158 7.13 0.00 0.00 4.20
293 294 0.902516 ATCCCAGCGCTCTATCTCCC 60.903 60.000 7.13 0.00 0.00 4.30
294 295 0.246086 CATCCCAGCGCTCTATCTCC 59.754 60.000 7.13 0.00 0.00 3.71
295 296 0.246086 CCATCCCAGCGCTCTATCTC 59.754 60.000 7.13 0.00 0.00 2.75
296 297 0.178950 TCCATCCCAGCGCTCTATCT 60.179 55.000 7.13 0.00 0.00 1.98
297 298 0.246086 CTCCATCCCAGCGCTCTATC 59.754 60.000 7.13 0.00 0.00 2.08
298 299 1.190833 CCTCCATCCCAGCGCTCTAT 61.191 60.000 7.13 0.00 0.00 1.98
299 300 1.834378 CCTCCATCCCAGCGCTCTA 60.834 63.158 7.13 0.00 0.00 2.43
300 301 3.160047 CCTCCATCCCAGCGCTCT 61.160 66.667 7.13 0.00 0.00 4.09
301 302 3.157252 TCCTCCATCCCAGCGCTC 61.157 66.667 7.13 0.00 0.00 5.03
302 303 3.160047 CTCCTCCATCCCAGCGCT 61.160 66.667 2.64 2.64 0.00 5.92
303 304 3.157252 TCTCCTCCATCCCAGCGC 61.157 66.667 0.00 0.00 0.00 5.92
304 305 3.136750 CTCTCCTCCATCCCAGCG 58.863 66.667 0.00 0.00 0.00 5.18
305 306 2.817056 GGCTCTCCTCCATCCCAGC 61.817 68.421 0.00 0.00 0.00 4.85
306 307 2.506061 CGGCTCTCCTCCATCCCAG 61.506 68.421 0.00 0.00 0.00 4.45
307 308 2.444706 CGGCTCTCCTCCATCCCA 60.445 66.667 0.00 0.00 0.00 4.37
308 309 2.123251 TCGGCTCTCCTCCATCCC 60.123 66.667 0.00 0.00 0.00 3.85
309 310 2.206536 CCTCGGCTCTCCTCCATCC 61.207 68.421 0.00 0.00 0.00 3.51
310 311 2.206536 CCCTCGGCTCTCCTCCATC 61.207 68.421 0.00 0.00 0.00 3.51
311 312 2.123077 CCCTCGGCTCTCCTCCAT 60.123 66.667 0.00 0.00 0.00 3.41
312 313 3.347590 TCCCTCGGCTCTCCTCCA 61.348 66.667 0.00 0.00 0.00 3.86
313 314 2.520741 CTCCCTCGGCTCTCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
314 315 1.528309 CTCTCCCTCGGCTCTCCTC 60.528 68.421 0.00 0.00 0.00 3.71
315 316 1.994885 CTCTCTCCCTCGGCTCTCCT 61.995 65.000 0.00 0.00 0.00 3.69
316 317 1.528309 CTCTCTCCCTCGGCTCTCC 60.528 68.421 0.00 0.00 0.00 3.71
317 318 0.535102 CTCTCTCTCCCTCGGCTCTC 60.535 65.000 0.00 0.00 0.00 3.20
318 319 0.986019 TCTCTCTCTCCCTCGGCTCT 60.986 60.000 0.00 0.00 0.00 4.09
319 320 0.535102 CTCTCTCTCTCCCTCGGCTC 60.535 65.000 0.00 0.00 0.00 4.70
320 321 0.986019 TCTCTCTCTCTCCCTCGGCT 60.986 60.000 0.00 0.00 0.00 5.52
321 322 0.535102 CTCTCTCTCTCTCCCTCGGC 60.535 65.000 0.00 0.00 0.00 5.54
322 323 0.535102 GCTCTCTCTCTCTCCCTCGG 60.535 65.000 0.00 0.00 0.00 4.63
323 324 0.535102 GGCTCTCTCTCTCTCCCTCG 60.535 65.000 0.00 0.00 0.00 4.63
324 325 0.178990 GGGCTCTCTCTCTCTCCCTC 60.179 65.000 0.00 0.00 0.00 4.30
325 326 1.930520 GGGCTCTCTCTCTCTCCCT 59.069 63.158 0.00 0.00 0.00 4.20
326 327 1.528309 CGGGCTCTCTCTCTCTCCC 60.528 68.421 0.00 0.00 0.00 4.30
327 328 1.528309 CCGGGCTCTCTCTCTCTCC 60.528 68.421 0.00 0.00 0.00 3.71
328 329 1.528309 CCCGGGCTCTCTCTCTCTC 60.528 68.421 8.08 0.00 0.00 3.20
329 330 2.600731 CCCGGGCTCTCTCTCTCT 59.399 66.667 8.08 0.00 0.00 3.10
330 331 2.520741 CCCCGGGCTCTCTCTCTC 60.521 72.222 17.73 0.00 0.00 3.20
331 332 2.581726 CTTCCCCGGGCTCTCTCTCT 62.582 65.000 17.73 0.00 0.00 3.10
332 333 2.042843 TTCCCCGGGCTCTCTCTC 60.043 66.667 17.73 0.00 0.00 3.20
333 334 2.042435 CTTCCCCGGGCTCTCTCT 60.042 66.667 17.73 0.00 0.00 3.10
334 335 3.855853 GCTTCCCCGGGCTCTCTC 61.856 72.222 17.73 0.00 0.00 3.20
335 336 4.406763 AGCTTCCCCGGGCTCTCT 62.407 66.667 17.73 6.33 32.98 3.10
340 341 4.918201 CATCGAGCTTCCCCGGGC 62.918 72.222 17.73 2.92 0.00 6.13
341 342 2.650813 CTTCATCGAGCTTCCCCGGG 62.651 65.000 15.80 15.80 0.00 5.73
342 343 1.227380 CTTCATCGAGCTTCCCCGG 60.227 63.158 0.00 0.00 0.00 5.73
343 344 0.249238 CTCTTCATCGAGCTTCCCCG 60.249 60.000 0.00 0.00 0.00 5.73
344 345 1.068434 CTCTCTTCATCGAGCTTCCCC 59.932 57.143 0.00 0.00 0.00 4.81
345 346 1.068434 CCTCTCTTCATCGAGCTTCCC 59.932 57.143 0.00 0.00 0.00 3.97
346 347 1.068434 CCCTCTCTTCATCGAGCTTCC 59.932 57.143 0.00 0.00 0.00 3.46
347 348 2.028130 TCCCTCTCTTCATCGAGCTTC 58.972 52.381 0.00 0.00 0.00 3.86
348 349 2.031120 CTCCCTCTCTTCATCGAGCTT 58.969 52.381 0.00 0.00 0.00 3.74
349 350 1.214175 TCTCCCTCTCTTCATCGAGCT 59.786 52.381 0.00 0.00 0.00 4.09
350 351 1.336755 GTCTCCCTCTCTTCATCGAGC 59.663 57.143 0.00 0.00 0.00 5.03
351 352 1.601903 CGTCTCCCTCTCTTCATCGAG 59.398 57.143 0.00 0.00 0.00 4.04
352 353 1.209747 TCGTCTCCCTCTCTTCATCGA 59.790 52.381 0.00 0.00 0.00 3.59
353 354 1.601903 CTCGTCTCCCTCTCTTCATCG 59.398 57.143 0.00 0.00 0.00 3.84
354 355 1.953686 CCTCGTCTCCCTCTCTTCATC 59.046 57.143 0.00 0.00 0.00 2.92
355 356 1.286553 ACCTCGTCTCCCTCTCTTCAT 59.713 52.381 0.00 0.00 0.00 2.57
356 357 0.699399 ACCTCGTCTCCCTCTCTTCA 59.301 55.000 0.00 0.00 0.00 3.02
357 358 1.340211 TGACCTCGTCTCCCTCTCTTC 60.340 57.143 0.00 0.00 33.15 2.87
358 359 0.699399 TGACCTCGTCTCCCTCTCTT 59.301 55.000 0.00 0.00 33.15 2.85
359 360 0.699399 TTGACCTCGTCTCCCTCTCT 59.301 55.000 0.00 0.00 33.15 3.10
360 361 1.770294 ATTGACCTCGTCTCCCTCTC 58.230 55.000 0.00 0.00 33.15 3.20
361 362 2.104170 GAATTGACCTCGTCTCCCTCT 58.896 52.381 0.00 0.00 33.15 3.69
362 363 1.825474 TGAATTGACCTCGTCTCCCTC 59.175 52.381 0.00 0.00 33.15 4.30
363 364 1.938585 TGAATTGACCTCGTCTCCCT 58.061 50.000 0.00 0.00 33.15 4.20
364 365 2.762535 TTGAATTGACCTCGTCTCCC 57.237 50.000 0.00 0.00 33.15 4.30
365 366 2.939103 CCATTGAATTGACCTCGTCTCC 59.061 50.000 0.00 0.00 33.15 3.71
366 367 3.619038 GTCCATTGAATTGACCTCGTCTC 59.381 47.826 0.00 0.00 33.15 3.36
367 368 3.600388 GTCCATTGAATTGACCTCGTCT 58.400 45.455 0.00 0.00 33.15 4.18
368 369 2.678336 GGTCCATTGAATTGACCTCGTC 59.322 50.000 18.26 0.00 44.17 4.20
369 370 2.039746 TGGTCCATTGAATTGACCTCGT 59.960 45.455 23.71 0.00 46.97 4.18
370 371 2.710377 TGGTCCATTGAATTGACCTCG 58.290 47.619 23.71 0.00 46.97 4.63
371 372 3.826157 TGTTGGTCCATTGAATTGACCTC 59.174 43.478 23.71 17.83 46.97 3.85
372 373 3.843422 TGTTGGTCCATTGAATTGACCT 58.157 40.909 23.71 0.00 46.97 3.85
374 375 4.220382 TGGATGTTGGTCCATTGAATTGAC 59.780 41.667 1.07 1.07 43.20 3.18
375 376 4.414677 TGGATGTTGGTCCATTGAATTGA 58.585 39.130 0.00 0.00 43.20 2.57
376 377 4.804868 TGGATGTTGGTCCATTGAATTG 57.195 40.909 0.00 0.00 43.20 2.32
384 385 4.457603 CGTTTCTATTTGGATGTTGGTCCA 59.542 41.667 0.00 0.00 46.28 4.02
385 386 4.698304 TCGTTTCTATTTGGATGTTGGTCC 59.302 41.667 0.00 0.00 38.81 4.46
386 387 5.873179 TCGTTTCTATTTGGATGTTGGTC 57.127 39.130 0.00 0.00 0.00 4.02
387 388 6.642707 TTTCGTTTCTATTTGGATGTTGGT 57.357 33.333 0.00 0.00 0.00 3.67
388 389 7.411804 GCAATTTCGTTTCTATTTGGATGTTGG 60.412 37.037 0.00 0.00 0.00 3.77
389 390 7.329226 AGCAATTTCGTTTCTATTTGGATGTTG 59.671 33.333 0.00 0.00 0.00 3.33
390 391 7.329226 CAGCAATTTCGTTTCTATTTGGATGTT 59.671 33.333 0.00 0.00 0.00 2.71
391 392 6.808212 CAGCAATTTCGTTTCTATTTGGATGT 59.192 34.615 0.00 0.00 0.00 3.06
392 393 6.237648 GCAGCAATTTCGTTTCTATTTGGATG 60.238 38.462 0.00 0.00 0.00 3.51
393 394 5.807011 GCAGCAATTTCGTTTCTATTTGGAT 59.193 36.000 0.00 0.00 0.00 3.41
394 395 5.160641 GCAGCAATTTCGTTTCTATTTGGA 58.839 37.500 0.00 0.00 0.00 3.53
395 396 4.922692 TGCAGCAATTTCGTTTCTATTTGG 59.077 37.500 0.00 0.00 0.00 3.28
396 397 6.636666 ATGCAGCAATTTCGTTTCTATTTG 57.363 33.333 0.00 0.00 0.00 2.32
397 398 7.698130 GTCTATGCAGCAATTTCGTTTCTATTT 59.302 33.333 0.00 0.00 0.00 1.40
398 399 7.148255 TGTCTATGCAGCAATTTCGTTTCTATT 60.148 33.333 0.00 0.00 0.00 1.73
399 400 6.316140 TGTCTATGCAGCAATTTCGTTTCTAT 59.684 34.615 0.00 0.00 0.00 1.98
400 401 5.641636 TGTCTATGCAGCAATTTCGTTTCTA 59.358 36.000 0.00 0.00 0.00 2.10
401 402 4.455533 TGTCTATGCAGCAATTTCGTTTCT 59.544 37.500 0.00 0.00 0.00 2.52
402 403 4.722194 TGTCTATGCAGCAATTTCGTTTC 58.278 39.130 0.00 0.00 0.00 2.78
403 404 4.764679 TGTCTATGCAGCAATTTCGTTT 57.235 36.364 0.00 0.00 0.00 3.60
404 405 4.665212 CATGTCTATGCAGCAATTTCGTT 58.335 39.130 0.00 0.00 0.00 3.85
405 406 4.282950 CATGTCTATGCAGCAATTTCGT 57.717 40.909 0.00 0.00 0.00 3.85
427 428 0.175760 TTCTCAGATCGGGCGGAAAG 59.824 55.000 0.00 0.00 0.00 2.62
428 429 0.108329 GTTCTCAGATCGGGCGGAAA 60.108 55.000 0.00 0.00 0.00 3.13
429 430 1.515954 GTTCTCAGATCGGGCGGAA 59.484 57.895 0.00 0.00 0.00 4.30
430 431 2.771639 CGTTCTCAGATCGGGCGGA 61.772 63.158 0.00 0.00 0.00 5.54
431 432 2.278857 CGTTCTCAGATCGGGCGG 60.279 66.667 0.00 0.00 0.00 6.13
432 433 1.721664 TACCGTTCTCAGATCGGGCG 61.722 60.000 24.81 4.10 45.71 6.13
433 434 0.248949 GTACCGTTCTCAGATCGGGC 60.249 60.000 24.81 14.85 45.71 6.13
434 435 1.390565 AGTACCGTTCTCAGATCGGG 58.609 55.000 24.81 9.82 45.71 5.14
435 436 2.422479 TGAAGTACCGTTCTCAGATCGG 59.578 50.000 20.64 20.64 46.51 4.18
436 437 3.759527 TGAAGTACCGTTCTCAGATCG 57.240 47.619 0.00 0.00 0.00 3.69
437 438 4.735822 CGAATGAAGTACCGTTCTCAGATC 59.264 45.833 0.00 0.00 31.61 2.75
438 439 4.673441 CGAATGAAGTACCGTTCTCAGAT 58.327 43.478 0.00 0.00 31.61 2.90
439 440 3.672511 GCGAATGAAGTACCGTTCTCAGA 60.673 47.826 0.00 0.00 31.61 3.27
440 441 2.599082 GCGAATGAAGTACCGTTCTCAG 59.401 50.000 0.00 0.00 31.61 3.35
441 442 2.602878 GCGAATGAAGTACCGTTCTCA 58.397 47.619 0.00 0.00 31.61 3.27
442 443 1.582502 CGCGAATGAAGTACCGTTCTC 59.417 52.381 0.00 0.00 31.61 2.87
443 444 1.068055 ACGCGAATGAAGTACCGTTCT 60.068 47.619 15.93 0.00 31.61 3.01
444 445 1.319669 GACGCGAATGAAGTACCGTTC 59.680 52.381 15.93 0.00 0.00 3.95
445 446 1.343506 GACGCGAATGAAGTACCGTT 58.656 50.000 15.93 0.00 0.00 4.44
446 447 0.457337 GGACGCGAATGAAGTACCGT 60.457 55.000 15.93 0.00 0.00 4.83
447 448 0.457166 TGGACGCGAATGAAGTACCG 60.457 55.000 15.93 0.00 0.00 4.02
448 449 1.717194 TTGGACGCGAATGAAGTACC 58.283 50.000 15.93 2.31 0.00 3.34
449 450 3.617263 AGATTTGGACGCGAATGAAGTAC 59.383 43.478 15.93 0.00 0.00 2.73
450 451 3.857052 AGATTTGGACGCGAATGAAGTA 58.143 40.909 15.93 0.00 0.00 2.24
451 452 2.673368 GAGATTTGGACGCGAATGAAGT 59.327 45.455 15.93 0.00 0.00 3.01
452 453 2.285256 CGAGATTTGGACGCGAATGAAG 60.285 50.000 15.93 0.00 32.88 3.02
453 454 1.658596 CGAGATTTGGACGCGAATGAA 59.341 47.619 15.93 2.28 32.88 2.57
454 455 1.277326 CGAGATTTGGACGCGAATGA 58.723 50.000 15.93 0.00 32.88 2.57
455 456 0.999406 ACGAGATTTGGACGCGAATG 59.001 50.000 15.93 0.00 34.93 2.67
456 457 0.999406 CACGAGATTTGGACGCGAAT 59.001 50.000 15.93 0.50 34.93 3.34
457 458 0.038983 TCACGAGATTTGGACGCGAA 60.039 50.000 15.93 0.00 34.93 4.70
458 459 0.456142 CTCACGAGATTTGGACGCGA 60.456 55.000 15.93 0.00 34.93 5.87
459 460 0.732880 ACTCACGAGATTTGGACGCG 60.733 55.000 3.53 3.53 36.71 6.01
460 461 0.716108 CACTCACGAGATTTGGACGC 59.284 55.000 0.00 0.00 0.00 5.19
461 462 0.716108 GCACTCACGAGATTTGGACG 59.284 55.000 0.00 0.00 0.00 4.79
462 463 1.461127 GTGCACTCACGAGATTTGGAC 59.539 52.381 10.32 0.00 32.98 4.02
463 464 1.795768 GTGCACTCACGAGATTTGGA 58.204 50.000 10.32 0.00 32.98 3.53
473 474 3.771491 CAGCGAGCGTGCACTCAC 61.771 66.667 16.19 4.55 36.42 3.51
474 475 4.284860 ACAGCGAGCGTGCACTCA 62.285 61.111 16.19 0.00 36.42 3.41
475 476 3.771491 CACAGCGAGCGTGCACTC 61.771 66.667 16.19 7.07 37.31 3.51
476 477 4.284860 TCACAGCGAGCGTGCACT 62.285 61.111 16.19 0.00 37.31 4.40
477 478 4.064491 GTCACAGCGAGCGTGCAC 62.064 66.667 6.82 6.82 37.31 4.57
487 488 1.746727 CTACATCGCAGCGTCACAGC 61.747 60.000 15.93 0.00 37.41 4.40
488 489 0.456824 ACTACATCGCAGCGTCACAG 60.457 55.000 15.93 10.72 0.00 3.66
489 490 0.806241 TACTACATCGCAGCGTCACA 59.194 50.000 15.93 0.00 0.00 3.58
490 491 2.044860 GATACTACATCGCAGCGTCAC 58.955 52.381 15.93 0.00 0.00 3.67
491 492 1.333791 CGATACTACATCGCAGCGTCA 60.334 52.381 15.93 0.00 34.66 4.35
492 493 1.319172 CGATACTACATCGCAGCGTC 58.681 55.000 15.93 0.86 34.66 5.19
493 494 0.661552 ACGATACTACATCGCAGCGT 59.338 50.000 15.93 0.00 44.60 5.07
494 495 1.755161 AACGATACTACATCGCAGCG 58.245 50.000 9.06 9.06 44.60 5.18
495 496 3.669122 CCTAAACGATACTACATCGCAGC 59.331 47.826 6.56 0.00 44.60 5.25
496 497 3.669122 GCCTAAACGATACTACATCGCAG 59.331 47.826 6.56 2.52 44.60 5.18
497 498 3.067040 TGCCTAAACGATACTACATCGCA 59.933 43.478 6.56 0.00 44.60 5.10
498 499 3.635331 TGCCTAAACGATACTACATCGC 58.365 45.455 6.56 0.00 44.60 4.58
499 500 5.118664 CCAATGCCTAAACGATACTACATCG 59.881 44.000 5.17 5.17 46.02 3.84
500 501 5.107065 GCCAATGCCTAAACGATACTACATC 60.107 44.000 0.00 0.00 0.00 3.06
501 502 4.755123 GCCAATGCCTAAACGATACTACAT 59.245 41.667 0.00 0.00 0.00 2.29
502 503 4.124238 GCCAATGCCTAAACGATACTACA 58.876 43.478 0.00 0.00 0.00 2.74
503 504 4.211374 CAGCCAATGCCTAAACGATACTAC 59.789 45.833 0.00 0.00 38.69 2.73
504 505 4.141801 ACAGCCAATGCCTAAACGATACTA 60.142 41.667 0.00 0.00 38.69 1.82
505 506 3.206150 CAGCCAATGCCTAAACGATACT 58.794 45.455 0.00 0.00 38.69 2.12
506 507 2.943033 ACAGCCAATGCCTAAACGATAC 59.057 45.455 0.00 0.00 38.69 2.24
507 508 3.275617 ACAGCCAATGCCTAAACGATA 57.724 42.857 0.00 0.00 38.69 2.92
508 509 2.128771 ACAGCCAATGCCTAAACGAT 57.871 45.000 0.00 0.00 38.69 3.73
509 510 2.772077 TACAGCCAATGCCTAAACGA 57.228 45.000 0.00 0.00 38.69 3.85
510 511 2.747446 ACTTACAGCCAATGCCTAAACG 59.253 45.455 0.00 0.00 38.69 3.60
511 512 4.783764 AACTTACAGCCAATGCCTAAAC 57.216 40.909 0.00 0.00 38.69 2.01
512 513 5.184287 GGTAAACTTACAGCCAATGCCTAAA 59.816 40.000 2.25 0.00 38.69 1.85
513 514 4.703093 GGTAAACTTACAGCCAATGCCTAA 59.297 41.667 2.25 0.00 38.69 2.69
514 515 4.263550 TGGTAAACTTACAGCCAATGCCTA 60.264 41.667 2.25 0.00 38.69 3.93
515 516 3.089284 GGTAAACTTACAGCCAATGCCT 58.911 45.455 2.25 0.00 38.69 4.75
516 517 2.823154 TGGTAAACTTACAGCCAATGCC 59.177 45.455 2.25 0.00 38.69 4.40
517 518 3.669557 CGTGGTAAACTTACAGCCAATGC 60.670 47.826 2.25 0.00 35.37 3.56
518 519 3.500680 ACGTGGTAAACTTACAGCCAATG 59.499 43.478 0.00 0.00 35.37 2.82
519 520 3.500680 CACGTGGTAAACTTACAGCCAAT 59.499 43.478 7.95 0.00 35.37 3.16
520 521 2.873472 CACGTGGTAAACTTACAGCCAA 59.127 45.455 7.95 0.00 35.37 4.52
521 522 2.158928 ACACGTGGTAAACTTACAGCCA 60.159 45.455 21.57 0.00 35.37 4.75
522 523 2.486918 ACACGTGGTAAACTTACAGCC 58.513 47.619 21.57 0.00 35.37 4.85
526 527 5.005107 GCTGCTATACACGTGGTAAACTTAC 59.995 44.000 21.57 0.58 35.14 2.34
535 536 1.209275 GAGCGCTGCTATACACGTGG 61.209 60.000 18.48 2.48 39.88 4.94
536 537 0.525455 TGAGCGCTGCTATACACGTG 60.525 55.000 18.48 15.48 39.88 4.49
538 539 1.277326 TTTGAGCGCTGCTATACACG 58.723 50.000 18.48 0.00 39.88 4.49
539 540 4.299155 TCTATTTGAGCGCTGCTATACAC 58.701 43.478 18.48 0.00 39.88 2.90
541 542 5.907197 TTTCTATTTGAGCGCTGCTATAC 57.093 39.130 18.48 0.00 39.88 1.47
551 552 6.035327 GGTGTCAATGCATTTTCTATTTGAGC 59.965 38.462 9.83 0.00 0.00 4.26
556 557 5.481473 AGTGGGTGTCAATGCATTTTCTATT 59.519 36.000 9.83 0.00 0.00 1.73
567 569 3.156293 TGGAATGAAGTGGGTGTCAATG 58.844 45.455 0.00 0.00 0.00 2.82
601 603 5.507077 TGATTTTGTTGCTTCGTTGTAGAC 58.493 37.500 0.00 0.00 0.00 2.59
613 615 7.647907 ATGACTTGAATTCTGATTTTGTTGC 57.352 32.000 7.05 0.00 0.00 4.17
642 648 6.266558 AGTGGCTTGAATTATTGTTGTTGGTA 59.733 34.615 0.00 0.00 0.00 3.25
644 650 5.540911 AGTGGCTTGAATTATTGTTGTTGG 58.459 37.500 0.00 0.00 0.00 3.77
680 686 2.432444 TCAAAACCACATTCGGCCTAG 58.568 47.619 0.00 0.00 0.00 3.02
681 687 2.554893 GTTCAAAACCACATTCGGCCTA 59.445 45.455 0.00 0.00 0.00 3.93
682 688 1.339929 GTTCAAAACCACATTCGGCCT 59.660 47.619 0.00 0.00 0.00 5.19
686 692 6.475076 TCAAAATGAGTTCAAAACCACATTCG 59.525 34.615 10.79 7.60 37.67 3.34
691 698 7.010091 ACGAATTCAAAATGAGTTCAAAACCAC 59.990 33.333 13.64 0.00 41.42 4.16
735 748 1.830477 GGACCAATCAGAGAGCAGAGT 59.170 52.381 0.00 0.00 0.00 3.24
1249 1281 3.341857 TTCAACCAAACGAAATCGGTG 57.658 42.857 7.81 4.97 39.00 4.94
1649 1702 1.379044 CCCACACCATCTTCAGGGC 60.379 63.158 0.00 0.00 0.00 5.19
1654 1707 5.990668 ACTAGTATTTCCCACACCATCTTC 58.009 41.667 0.00 0.00 0.00 2.87
1655 1708 6.672657 AGTACTAGTATTTCCCACACCATCTT 59.327 38.462 5.75 0.00 0.00 2.40
1656 1709 6.203072 AGTACTAGTATTTCCCACACCATCT 58.797 40.000 5.75 0.00 0.00 2.90
1658 1711 7.069578 CAGTAGTACTAGTATTTCCCACACCAT 59.930 40.741 9.94 0.00 0.00 3.55
1659 1712 6.379133 CAGTAGTACTAGTATTTCCCACACCA 59.621 42.308 9.94 0.00 0.00 4.17
1660 1713 6.604795 TCAGTAGTACTAGTATTTCCCACACC 59.395 42.308 9.94 0.00 0.00 4.16
1736 1829 3.698539 TCACAAGACCAAATTGCAGACAA 59.301 39.130 0.00 0.00 40.87 3.18
1865 1968 7.176589 TGAAATTGAGTACCCTGTTTGTTTT 57.823 32.000 0.00 0.00 0.00 2.43
1896 1999 8.821686 TTGGGTGATCAACATAACATAAGATT 57.178 30.769 13.90 0.00 0.00 2.40
1911 2014 8.536340 TTGATTGAAATATGATTGGGTGATCA 57.464 30.769 0.00 0.00 40.11 2.92
1937 2041 4.717877 TCAAAGAATCAGTTTCCTGCAGA 58.282 39.130 17.39 0.00 38.66 4.26
1982 2087 6.267699 CGCATGGAGGTGGAGGATTATATATA 59.732 42.308 0.00 0.00 0.00 0.86
1983 2088 5.070981 CGCATGGAGGTGGAGGATTATATAT 59.929 44.000 0.00 0.00 0.00 0.86
1984 2089 4.405680 CGCATGGAGGTGGAGGATTATATA 59.594 45.833 0.00 0.00 0.00 0.86
1985 2090 3.198635 CGCATGGAGGTGGAGGATTATAT 59.801 47.826 0.00 0.00 0.00 0.86
2021 2126 3.614092 CTTGTCCAATCTAGCACCACAT 58.386 45.455 0.00 0.00 0.00 3.21
2022 2127 2.290260 CCTTGTCCAATCTAGCACCACA 60.290 50.000 0.00 0.00 0.00 4.17
2063 2171 8.653338 CAGAGGATAAATTTTCTGCAATTTGTG 58.347 33.333 0.00 0.00 37.04 3.33
2065 2173 8.991243 TCAGAGGATAAATTTTCTGCAATTTG 57.009 30.769 11.25 0.00 37.04 2.32
2067 2175 9.428097 GTTTCAGAGGATAAATTTTCTGCAATT 57.572 29.630 11.25 0.00 37.54 2.32
2068 2176 8.037166 GGTTTCAGAGGATAAATTTTCTGCAAT 58.963 33.333 11.25 0.00 37.54 3.56
2076 2254 7.015584 AGCTTTGTGGTTTCAGAGGATAAATTT 59.984 33.333 0.00 0.00 0.00 1.82
2083 2261 2.172505 TCAGCTTTGTGGTTTCAGAGGA 59.827 45.455 0.00 0.00 0.00 3.71
2084 2262 2.551459 CTCAGCTTTGTGGTTTCAGAGG 59.449 50.000 0.00 0.00 0.00 3.69
2087 2265 4.142403 TGTTTCTCAGCTTTGTGGTTTCAG 60.142 41.667 0.00 0.00 0.00 3.02
2089 2267 4.370364 TGTTTCTCAGCTTTGTGGTTTC 57.630 40.909 0.00 0.00 0.00 2.78
2098 2276 2.288640 GCAGCCAAATGTTTCTCAGCTT 60.289 45.455 0.00 0.00 0.00 3.74
2100 2278 1.271656 AGCAGCCAAATGTTTCTCAGC 59.728 47.619 0.00 0.00 0.00 4.26
2143 2327 6.150976 TCCAAATAACATGTGTTTCTGGCTAG 59.849 38.462 0.00 0.00 39.31 3.42
2144 2328 6.007076 TCCAAATAACATGTGTTTCTGGCTA 58.993 36.000 0.00 0.00 39.31 3.93
2145 2329 4.832266 TCCAAATAACATGTGTTTCTGGCT 59.168 37.500 0.00 0.00 39.31 4.75
2166 2350 1.056700 TCTGGCCCTTCCTAGCATCC 61.057 60.000 0.00 0.00 35.26 3.51
2177 2390 3.782523 TCATCTCTGTTTAATCTGGCCCT 59.217 43.478 0.00 0.00 0.00 5.19
2180 2393 9.674824 CATTTAATCATCTCTGTTTAATCTGGC 57.325 33.333 0.00 0.00 30.50 4.85
2181 2394 9.674824 GCATTTAATCATCTCTGTTTAATCTGG 57.325 33.333 0.00 0.00 30.50 3.86
2205 2418 0.451383 GTGATGCCTGTTATTGCGCA 59.549 50.000 5.66 5.66 35.35 6.09
2207 2420 1.532505 GCAGTGATGCCTGTTATTGCG 60.533 52.381 0.00 0.00 34.84 4.85
2277 2496 5.008613 GTGTTGATGCAGAGAAACTAAACCA 59.991 40.000 0.00 0.00 0.00 3.67
2283 2502 3.057736 GCATGTGTTGATGCAGAGAAACT 60.058 43.478 0.00 0.00 46.77 2.66
2312 2531 6.439636 TCTAGATAATCCCCCAAATGTGAG 57.560 41.667 0.00 0.00 0.00 3.51
2318 2537 3.652869 CCAGCTCTAGATAATCCCCCAAA 59.347 47.826 0.00 0.00 0.00 3.28
2322 2541 4.023291 CTCTCCAGCTCTAGATAATCCCC 58.977 52.174 0.00 0.00 0.00 4.81
2331 2550 6.945435 TCTAATTGTATCCTCTCCAGCTCTAG 59.055 42.308 0.00 0.00 0.00 2.43
2383 2602 4.748102 TGTGTTCGGTTTCTACATGAGTTC 59.252 41.667 0.00 0.00 0.00 3.01
2399 2618 4.853196 CAGGATGCATAAAGTTTGTGTTCG 59.147 41.667 13.13 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.