Multiple sequence alignment - TraesCS6D01G061600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G061600 chr6D 100.000 4785 0 0 1 4785 28702787 28698003 0.000000e+00 8837
1 TraesCS6D01G061600 chr6B 92.665 2931 130 28 534 3420 61492294 61495183 0.000000e+00 4143
2 TraesCS6D01G061600 chr6B 92.175 869 57 4 3706 4568 61495249 61496112 0.000000e+00 1218
3 TraesCS6D01G061600 chr6B 90.196 153 14 1 4633 4785 61496124 61496275 1.050000e-46 198
4 TraesCS6D01G061600 chr6A 92.813 2741 136 23 783 3494 33952414 33955122 0.000000e+00 3914
5 TraesCS6D01G061600 chr6A 93.126 1062 55 8 3727 4785 33955118 33956164 0.000000e+00 1541
6 TraesCS6D01G061600 chr6A 86.184 304 38 4 87 387 33951390 33951692 4.620000e-85 326
7 TraesCS6D01G061600 chr6A 85.455 220 22 5 462 680 33952150 33952360 2.240000e-53 220
8 TraesCS6D01G061600 chr5D 91.753 873 58 7 3706 4572 539741914 539741050 0.000000e+00 1201
9 TraesCS6D01G061600 chr5D 90.639 673 48 9 1998 2660 539743492 539742825 0.000000e+00 880
10 TraesCS6D01G061600 chr5D 91.513 542 33 4 2879 3420 539742508 539741980 0.000000e+00 734
11 TraesCS6D01G061600 chr5D 91.275 149 12 1 4633 4781 539741042 539740895 8.120000e-48 202
12 TraesCS6D01G061600 chr3B 91.190 874 60 8 3706 4572 735002217 735001354 0.000000e+00 1171
13 TraesCS6D01G061600 chr3B 89.701 670 55 8 1998 2657 735003779 735003114 0.000000e+00 843
14 TraesCS6D01G061600 chr3B 90.485 557 41 3 2864 3420 735002827 735002283 0.000000e+00 725
15 TraesCS6D01G061600 chr3B 90.652 353 22 6 1998 2342 735004599 735004250 4.360000e-125 459
16 TraesCS6D01G061600 chr3B 88.889 153 16 1 4633 4785 735001346 735001195 2.270000e-43 187
17 TraesCS6D01G061600 chr2D 88.110 942 88 11 1464 2391 248777390 248776459 0.000000e+00 1098
18 TraesCS6D01G061600 chr2D 85.987 628 77 7 3711 4336 248741535 248740917 0.000000e+00 662
19 TraesCS6D01G061600 chr2D 85.061 656 84 4 2808 3462 248760620 248759978 0.000000e+00 656
20 TraesCS6D01G061600 chr2A 87.248 941 90 18 1464 2391 288988205 288987282 0.000000e+00 1046
21 TraesCS6D01G061600 chr2A 83.994 656 90 6 2808 3462 288983561 288982920 2.450000e-172 616
22 TraesCS6D01G061600 chr2A 83.607 610 86 10 3853 4458 288961220 288960621 1.160000e-155 560
23 TraesCS6D01G061600 chr2A 82.292 576 68 20 4189 4740 38780237 38780802 7.250000e-128 468
24 TraesCS6D01G061600 chr2A 82.915 398 51 10 2386 2776 288983951 288983564 4.590000e-90 342
25 TraesCS6D01G061600 chr2A 91.111 135 10 2 3711 3845 288963011 288962879 1.060000e-41 182
26 TraesCS6D01G061600 chr1A 90.089 676 52 8 1998 2664 17885223 17884554 0.000000e+00 863
27 TraesCS6D01G061600 chr1A 93.290 462 28 2 3706 4167 17883933 17883475 0.000000e+00 678
28 TraesCS6D01G061600 chr1A 88.330 557 47 7 2864 3420 17884537 17883999 0.000000e+00 652
29 TraesCS6D01G061600 chr1A 87.470 415 39 6 4157 4565 17879620 17879213 2.610000e-127 466
30 TraesCS6D01G061600 chr1A 88.235 153 17 1 4633 4785 17879198 17879047 1.060000e-41 182
31 TraesCS6D01G061600 chr3A 90.601 649 44 9 1998 2635 94173883 94173241 0.000000e+00 845
32 TraesCS6D01G061600 chr3A 90.844 557 37 7 2864 3420 94172971 94172429 0.000000e+00 734
33 TraesCS6D01G061600 chr3A 93.970 398 21 2 3706 4103 94172363 94171969 2.460000e-167 599
34 TraesCS6D01G061600 chr3A 89.301 458 36 6 4121 4572 94170622 94170172 3.230000e-156 562
35 TraesCS6D01G061600 chr3A 90.196 153 14 1 4633 4785 94170164 94170013 1.050000e-46 198
36 TraesCS6D01G061600 chr5A 82.639 576 66 18 4189 4740 552876055 552876620 3.350000e-131 479


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G061600 chr6D 28698003 28702787 4784 True 8837.00 8837 100.000000 1 4785 1 chr6D.!!$R1 4784
1 TraesCS6D01G061600 chr6B 61492294 61496275 3981 False 1853.00 4143 91.678667 534 4785 3 chr6B.!!$F1 4251
2 TraesCS6D01G061600 chr6A 33951390 33956164 4774 False 1500.25 3914 89.394500 87 4785 4 chr6A.!!$F1 4698
3 TraesCS6D01G061600 chr5D 539740895 539743492 2597 True 754.25 1201 91.295000 1998 4781 4 chr5D.!!$R1 2783
4 TraesCS6D01G061600 chr3B 735001195 735004599 3404 True 677.00 1171 90.183400 1998 4785 5 chr3B.!!$R1 2787
5 TraesCS6D01G061600 chr2D 248776459 248777390 931 True 1098.00 1098 88.110000 1464 2391 1 chr2D.!!$R3 927
6 TraesCS6D01G061600 chr2D 248740917 248741535 618 True 662.00 662 85.987000 3711 4336 1 chr2D.!!$R1 625
7 TraesCS6D01G061600 chr2D 248759978 248760620 642 True 656.00 656 85.061000 2808 3462 1 chr2D.!!$R2 654
8 TraesCS6D01G061600 chr2A 288982920 288988205 5285 True 668.00 1046 84.719000 1464 3462 3 chr2A.!!$R2 1998
9 TraesCS6D01G061600 chr2A 38780237 38780802 565 False 468.00 468 82.292000 4189 4740 1 chr2A.!!$F1 551
10 TraesCS6D01G061600 chr2A 288960621 288963011 2390 True 371.00 560 87.359000 3711 4458 2 chr2A.!!$R1 747
11 TraesCS6D01G061600 chr1A 17879047 17885223 6176 True 568.20 863 89.482800 1998 4785 5 chr1A.!!$R1 2787
12 TraesCS6D01G061600 chr3A 94170013 94173883 3870 True 587.60 845 90.982400 1998 4785 5 chr3A.!!$R1 2787
13 TraesCS6D01G061600 chr5A 552876055 552876620 565 False 479.00 479 82.639000 4189 4740 1 chr5A.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 398 0.037326 GCATCGATATCGGCTTCCCA 60.037 55.0 24.12 4.08 40.29 4.37 F
425 428 0.328258 AAGGACAACATAGCGGCCTT 59.672 50.0 0.00 0.00 0.00 4.35 F
1410 1812 0.338120 AGGTCCTCTCCTCCCTCTTG 59.662 60.0 0.00 0.00 31.32 3.02 F
1425 1827 0.391661 TCTTGCCTCGCCATTGACTC 60.392 55.0 0.00 0.00 0.00 3.36 F
1739 2155 0.771127 AACCAAGTAAGGCTGCAGGA 59.229 50.0 17.12 0.00 0.00 3.86 F
3404 8110 0.790207 GTACACACCATGCGTCACAG 59.210 55.0 0.00 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1449 1851 0.452184 TCGCTAAGAGCCGTCAGAAG 59.548 55.000 0.00 0.0 38.18 2.85 R
1689 2105 1.115930 AGAACTGCACGACCTCCACT 61.116 55.000 0.00 0.0 0.00 4.00 R
3226 7927 1.067213 GCTCCTGAGAAGAAGCGACTT 60.067 52.381 0.00 0.0 0.00 3.01 R
3420 8126 1.666700 TGTAAGTGCACGTGTGAAACC 59.333 47.619 18.38 0.0 34.36 3.27 R
3514 8220 0.030638 CATTTTATCGCCCCTTGCCG 59.969 55.000 0.00 0.0 36.24 5.69 R
4606 16182 2.074729 TTCCTTCTTCCCCGCAAAAA 57.925 45.000 0.00 0.0 0.00 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.886579 TCATCTTCATCCGTGGTCATATG 58.113 43.478 0.00 0.00 0.00 1.78
23 24 3.111853 TCTTCATCCGTGGTCATATGC 57.888 47.619 0.00 0.00 0.00 3.14
24 25 2.433970 TCTTCATCCGTGGTCATATGCA 59.566 45.455 0.00 0.00 0.00 3.96
25 26 2.998316 TCATCCGTGGTCATATGCAA 57.002 45.000 0.00 0.00 0.00 4.08
26 27 2.560504 TCATCCGTGGTCATATGCAAC 58.439 47.619 0.00 0.00 0.00 4.17
27 28 2.170397 TCATCCGTGGTCATATGCAACT 59.830 45.455 0.00 0.00 0.00 3.16
28 29 2.779755 TCCGTGGTCATATGCAACTT 57.220 45.000 0.00 0.00 0.00 2.66
29 30 2.627945 TCCGTGGTCATATGCAACTTC 58.372 47.619 0.00 0.00 0.00 3.01
30 31 2.027653 TCCGTGGTCATATGCAACTTCA 60.028 45.455 0.00 0.00 0.00 3.02
31 32 2.352651 CCGTGGTCATATGCAACTTCAG 59.647 50.000 0.00 0.00 0.00 3.02
32 33 3.261580 CGTGGTCATATGCAACTTCAGA 58.738 45.455 0.00 0.00 0.00 3.27
33 34 3.684305 CGTGGTCATATGCAACTTCAGAA 59.316 43.478 0.00 0.00 0.00 3.02
34 35 4.201753 CGTGGTCATATGCAACTTCAGAAG 60.202 45.833 8.77 8.77 0.00 2.85
35 36 3.691118 TGGTCATATGCAACTTCAGAAGC 59.309 43.478 10.33 0.00 0.00 3.86
36 37 3.065925 GGTCATATGCAACTTCAGAAGCC 59.934 47.826 10.33 0.00 0.00 4.35
37 38 3.691118 GTCATATGCAACTTCAGAAGCCA 59.309 43.478 10.33 5.74 0.00 4.75
38 39 4.156556 GTCATATGCAACTTCAGAAGCCAA 59.843 41.667 10.33 0.00 0.00 4.52
39 40 4.766373 TCATATGCAACTTCAGAAGCCAAA 59.234 37.500 10.33 0.00 0.00 3.28
40 41 2.869233 TGCAACTTCAGAAGCCAAAC 57.131 45.000 10.33 0.00 0.00 2.93
41 42 2.098614 TGCAACTTCAGAAGCCAAACA 58.901 42.857 10.33 0.00 0.00 2.83
42 43 2.495270 TGCAACTTCAGAAGCCAAACAA 59.505 40.909 10.33 0.00 0.00 2.83
43 44 3.132646 TGCAACTTCAGAAGCCAAACAAT 59.867 39.130 10.33 0.00 0.00 2.71
44 45 4.340666 TGCAACTTCAGAAGCCAAACAATA 59.659 37.500 10.33 0.00 0.00 1.90
45 46 5.163468 TGCAACTTCAGAAGCCAAACAATAA 60.163 36.000 10.33 0.00 0.00 1.40
46 47 5.752955 GCAACTTCAGAAGCCAAACAATAAA 59.247 36.000 10.33 0.00 0.00 1.40
47 48 6.424812 GCAACTTCAGAAGCCAAACAATAAAT 59.575 34.615 10.33 0.00 0.00 1.40
48 49 7.041848 GCAACTTCAGAAGCCAAACAATAAATT 60.042 33.333 10.33 0.00 0.00 1.82
49 50 7.951530 ACTTCAGAAGCCAAACAATAAATTG 57.048 32.000 10.33 1.13 43.26 2.32
65 66 8.118893 CAATAAATTGTAGAAATTTGCCTCGG 57.881 34.615 0.00 0.00 32.64 4.63
66 67 5.975693 AAATTGTAGAAATTTGCCTCGGA 57.024 34.783 0.00 0.00 0.00 4.55
67 68 5.975693 AATTGTAGAAATTTGCCTCGGAA 57.024 34.783 0.00 0.00 0.00 4.30
68 69 5.567138 ATTGTAGAAATTTGCCTCGGAAG 57.433 39.130 0.00 0.00 0.00 3.46
69 70 4.015872 TGTAGAAATTTGCCTCGGAAGT 57.984 40.909 0.00 0.00 0.00 3.01
70 71 4.394729 TGTAGAAATTTGCCTCGGAAGTT 58.605 39.130 0.00 0.00 0.00 2.66
71 72 4.454504 TGTAGAAATTTGCCTCGGAAGTTC 59.545 41.667 0.00 0.00 31.93 3.01
72 73 3.486383 AGAAATTTGCCTCGGAAGTTCA 58.514 40.909 5.01 0.00 33.63 3.18
73 74 4.082125 AGAAATTTGCCTCGGAAGTTCAT 58.918 39.130 5.01 0.00 33.63 2.57
74 75 3.855689 AATTTGCCTCGGAAGTTCATG 57.144 42.857 5.01 0.00 0.00 3.07
75 76 1.533625 TTTGCCTCGGAAGTTCATGG 58.466 50.000 5.01 4.61 0.00 3.66
76 77 0.960364 TTGCCTCGGAAGTTCATGGC 60.960 55.000 19.59 19.59 40.62 4.40
77 78 1.078143 GCCTCGGAAGTTCATGGCT 60.078 57.895 19.30 0.00 37.58 4.75
78 79 0.178068 GCCTCGGAAGTTCATGGCTA 59.822 55.000 19.30 0.00 37.58 3.93
79 80 1.941325 CCTCGGAAGTTCATGGCTAC 58.059 55.000 5.01 0.00 0.00 3.58
80 81 1.207089 CCTCGGAAGTTCATGGCTACA 59.793 52.381 5.01 0.00 0.00 2.74
81 82 2.158900 CCTCGGAAGTTCATGGCTACAT 60.159 50.000 5.01 0.00 37.99 2.29
82 83 3.069586 CCTCGGAAGTTCATGGCTACATA 59.930 47.826 5.01 0.00 34.99 2.29
83 84 4.051922 CTCGGAAGTTCATGGCTACATAC 58.948 47.826 5.01 0.00 34.99 2.39
84 85 3.449377 TCGGAAGTTCATGGCTACATACA 59.551 43.478 5.01 0.00 34.99 2.29
85 86 3.804325 CGGAAGTTCATGGCTACATACAG 59.196 47.826 5.01 0.00 34.99 2.74
92 93 4.295201 TCATGGCTACATACAGGGTAACT 58.705 43.478 0.00 0.00 34.99 2.24
94 95 5.276224 CATGGCTACATACAGGGTAACTGC 61.276 50.000 0.00 0.00 42.60 4.40
107 108 4.344359 GGTAACTGCCCAAAAATTCCAA 57.656 40.909 0.00 0.00 0.00 3.53
114 115 6.230472 ACTGCCCAAAAATTCCAAGATTTAC 58.770 36.000 0.00 0.00 0.00 2.01
115 116 5.233988 TGCCCAAAAATTCCAAGATTTACG 58.766 37.500 0.00 0.00 0.00 3.18
116 117 5.221541 TGCCCAAAAATTCCAAGATTTACGT 60.222 36.000 0.00 0.00 0.00 3.57
122 123 8.911662 CAAAAATTCCAAGATTTACGTAAGGTG 58.088 33.333 8.23 5.56 46.39 4.00
123 124 5.813080 ATTCCAAGATTTACGTAAGGTGC 57.187 39.130 8.23 0.03 46.39 5.01
124 125 4.274602 TCCAAGATTTACGTAAGGTGCA 57.725 40.909 8.23 0.00 46.39 4.57
125 126 3.998341 TCCAAGATTTACGTAAGGTGCAC 59.002 43.478 8.80 8.80 46.39 4.57
126 127 3.749088 CCAAGATTTACGTAAGGTGCACA 59.251 43.478 20.43 0.00 46.39 4.57
127 128 4.378046 CCAAGATTTACGTAAGGTGCACAC 60.378 45.833 20.43 7.49 46.39 3.82
128 129 2.991190 AGATTTACGTAAGGTGCACACG 59.009 45.455 22.20 22.20 46.39 4.49
130 131 0.388659 TTACGTAAGGTGCACACGGT 59.611 50.000 25.84 16.30 46.39 4.83
131 132 0.318869 TACGTAAGGTGCACACGGTG 60.319 55.000 25.84 6.58 46.39 4.94
132 133 1.593209 CGTAAGGTGCACACGGTGT 60.593 57.895 20.43 8.21 35.75 4.16
142 145 3.022287 CACGGTGTGTGCAGGAAC 58.978 61.111 0.00 0.00 42.70 3.62
164 167 7.361799 GGAACTGATTTTAGCTTTTACATCCGT 60.362 37.037 0.00 0.00 0.00 4.69
189 192 5.772825 TTTAGGATGCACATATGAAAGCC 57.227 39.130 10.38 6.48 0.00 4.35
194 197 0.465460 GCACATATGAAAGCCGGGGA 60.465 55.000 10.38 0.00 0.00 4.81
195 198 1.308998 CACATATGAAAGCCGGGGAC 58.691 55.000 10.38 0.00 0.00 4.46
196 199 0.916086 ACATATGAAAGCCGGGGACA 59.084 50.000 10.38 0.00 0.00 4.02
211 214 1.407437 GGGACATGCACCTCCTTGTAG 60.407 57.143 10.61 0.00 0.00 2.74
221 224 2.569404 ACCTCCTTGTAGAGCCTGAAAG 59.431 50.000 0.00 0.00 32.17 2.62
253 256 1.292223 CGACGCTTCCCCTCTTCAA 59.708 57.895 0.00 0.00 0.00 2.69
268 271 5.316987 CCTCTTCAACCACCTATCAAACTT 58.683 41.667 0.00 0.00 0.00 2.66
277 280 4.003648 CACCTATCAAACTTCTGGTGGTC 58.996 47.826 0.00 0.00 40.65 4.02
278 281 3.650942 ACCTATCAAACTTCTGGTGGTCA 59.349 43.478 0.00 0.00 0.00 4.02
279 282 4.104102 ACCTATCAAACTTCTGGTGGTCAA 59.896 41.667 0.00 0.00 0.00 3.18
285 288 6.068010 TCAAACTTCTGGTGGTCAAACATAT 58.932 36.000 0.00 0.00 0.00 1.78
290 293 5.241403 TCTGGTGGTCAAACATATTGAGT 57.759 39.130 0.00 0.00 0.00 3.41
300 303 6.749118 GTCAAACATATTGAGTCTGCCATTTC 59.251 38.462 0.00 0.00 0.00 2.17
310 313 4.886579 AGTCTGCCATTTCCAAAATCAAC 58.113 39.130 0.00 0.00 0.00 3.18
311 314 4.344679 AGTCTGCCATTTCCAAAATCAACA 59.655 37.500 0.00 0.00 0.00 3.33
313 316 5.702209 GTCTGCCATTTCCAAAATCAACAAT 59.298 36.000 0.00 0.00 0.00 2.71
334 337 2.348362 TGAAACACGCATAGCAATCTCG 59.652 45.455 0.00 0.00 0.00 4.04
387 390 2.194800 ACATAGCCGCATCGATATCG 57.805 50.000 19.14 19.14 41.45 2.92
388 391 1.202302 ACATAGCCGCATCGATATCGG 60.202 52.381 25.28 25.28 45.46 4.18
391 394 4.578913 CCGCATCGATATCGGCTT 57.421 55.556 24.12 7.69 40.29 4.35
392 395 2.363807 CCGCATCGATATCGGCTTC 58.636 57.895 24.12 10.54 40.29 3.86
393 396 1.078759 CCGCATCGATATCGGCTTCC 61.079 60.000 24.12 8.33 40.29 3.46
394 397 1.078759 CGCATCGATATCGGCTTCCC 61.079 60.000 24.12 7.07 40.29 3.97
395 398 0.037326 GCATCGATATCGGCTTCCCA 60.037 55.000 24.12 4.08 40.29 4.37
396 399 1.714794 CATCGATATCGGCTTCCCAC 58.285 55.000 24.12 0.00 40.29 4.61
397 400 0.608640 ATCGATATCGGCTTCCCACC 59.391 55.000 24.12 0.00 40.29 4.61
398 401 1.004918 CGATATCGGCTTCCCACCC 60.005 63.158 17.51 0.00 35.37 4.61
399 402 1.375326 GATATCGGCTTCCCACCCC 59.625 63.158 0.00 0.00 0.00 4.95
400 403 2.125766 GATATCGGCTTCCCACCCCC 62.126 65.000 0.00 0.00 0.00 5.40
401 404 2.638025 ATATCGGCTTCCCACCCCCT 62.638 60.000 0.00 0.00 0.00 4.79
419 422 1.009829 CTCGCCAAGGACAACATAGC 58.990 55.000 0.00 0.00 0.00 2.97
420 423 0.739462 TCGCCAAGGACAACATAGCG 60.739 55.000 0.00 0.00 43.20 4.26
421 424 1.705337 CGCCAAGGACAACATAGCGG 61.705 60.000 0.00 0.00 38.52 5.52
422 425 1.993369 GCCAAGGACAACATAGCGGC 61.993 60.000 0.00 0.00 0.00 6.53
423 426 1.376609 CCAAGGACAACATAGCGGCC 61.377 60.000 0.00 0.00 0.00 6.13
424 427 0.392998 CAAGGACAACATAGCGGCCT 60.393 55.000 0.00 0.00 0.00 5.19
425 428 0.328258 AAGGACAACATAGCGGCCTT 59.672 50.000 0.00 0.00 0.00 4.35
426 429 0.392998 AGGACAACATAGCGGCCTTG 60.393 55.000 0.00 0.00 0.00 3.61
427 430 1.429423 GACAACATAGCGGCCTTGC 59.571 57.895 0.00 0.00 0.00 4.01
428 431 1.993369 GACAACATAGCGGCCTTGCC 61.993 60.000 0.00 0.00 46.75 4.52
448 451 4.812476 CCGATTCGAGCCCGCACA 62.812 66.667 7.83 0.00 35.37 4.57
449 452 2.813474 CGATTCGAGCCCGCACAA 60.813 61.111 0.00 0.00 35.37 3.33
450 453 2.785258 GATTCGAGCCCGCACAAC 59.215 61.111 0.00 0.00 35.37 3.32
451 454 1.741770 GATTCGAGCCCGCACAACT 60.742 57.895 0.00 0.00 35.37 3.16
452 455 1.696832 GATTCGAGCCCGCACAACTC 61.697 60.000 0.00 0.00 35.37 3.01
453 456 3.876589 TTCGAGCCCGCACAACTCC 62.877 63.158 0.00 0.00 35.37 3.85
454 457 4.680237 CGAGCCCGCACAACTCCA 62.680 66.667 0.00 0.00 0.00 3.86
455 458 2.743928 GAGCCCGCACAACTCCAG 60.744 66.667 0.00 0.00 0.00 3.86
456 459 3.537206 GAGCCCGCACAACTCCAGT 62.537 63.158 0.00 0.00 0.00 4.00
457 460 3.357079 GCCCGCACAACTCCAGTG 61.357 66.667 0.00 0.00 39.92 3.66
462 465 4.828409 CACAACTCCAGTGCCCAT 57.172 55.556 0.00 0.00 0.00 4.00
463 466 2.559785 CACAACTCCAGTGCCCATC 58.440 57.895 0.00 0.00 0.00 3.51
464 467 1.003355 ACAACTCCAGTGCCCATCG 60.003 57.895 0.00 0.00 0.00 3.84
465 468 2.045926 AACTCCAGTGCCCATCGC 60.046 61.111 0.00 0.00 38.31 4.58
466 469 2.596851 AACTCCAGTGCCCATCGCT 61.597 57.895 0.00 0.00 38.78 4.93
467 470 1.264749 AACTCCAGTGCCCATCGCTA 61.265 55.000 0.00 0.00 38.78 4.26
468 471 1.227380 CTCCAGTGCCCATCGCTAC 60.227 63.158 0.00 0.00 38.78 3.58
529 914 2.897350 GCCAGGTAGATGCGCCAC 60.897 66.667 4.18 0.00 0.00 5.01
555 941 1.004745 GAACATGCTCCTTTCCTCCCA 59.995 52.381 0.00 0.00 0.00 4.37
648 1034 1.816224 GAAGCAGAACCCGGCAAAATA 59.184 47.619 0.00 0.00 35.90 1.40
704 1102 4.094887 CACAGCTATAAATCCAGTTTGCGT 59.905 41.667 0.00 0.00 0.00 5.24
705 1103 4.094887 ACAGCTATAAATCCAGTTTGCGTG 59.905 41.667 0.00 0.00 0.00 5.34
706 1104 3.627577 AGCTATAAATCCAGTTTGCGTGG 59.372 43.478 0.00 0.00 36.28 4.94
715 1113 4.138290 TCCAGTTTGCGTGGAATAGAAAA 58.862 39.130 0.00 0.00 41.32 2.29
717 1115 4.226761 CAGTTTGCGTGGAATAGAAAACC 58.773 43.478 0.00 0.00 0.00 3.27
720 1118 1.810151 TGCGTGGAATAGAAAACCAGC 59.190 47.619 0.00 0.00 34.21 4.85
723 1121 2.739913 CGTGGAATAGAAAACCAGCGAA 59.260 45.455 0.00 0.00 34.21 4.70
731 1129 2.100584 AGAAAACCAGCGAACAATTGCA 59.899 40.909 5.05 0.00 38.53 4.08
736 1134 2.865551 ACCAGCGAACAATTGCAAAAAG 59.134 40.909 1.71 0.00 38.53 2.27
737 1135 2.348779 CCAGCGAACAATTGCAAAAAGC 60.349 45.455 1.71 3.94 45.96 3.51
738 1136 1.866601 AGCGAACAATTGCAAAAAGCC 59.133 42.857 1.71 0.00 44.83 4.35
739 1137 1.397065 GCGAACAATTGCAAAAAGCCG 60.397 47.619 1.71 6.39 44.83 5.52
740 1138 2.123342 CGAACAATTGCAAAAAGCCGA 58.877 42.857 1.71 0.00 44.83 5.54
741 1139 2.153627 CGAACAATTGCAAAAAGCCGAG 59.846 45.455 1.71 0.00 44.83 4.63
742 1140 2.888834 ACAATTGCAAAAAGCCGAGT 57.111 40.000 1.71 0.00 44.83 4.18
757 1155 1.202973 CGAGTCATCGGTCATCGTGC 61.203 60.000 0.00 0.00 45.39 5.34
760 1158 3.630148 CATCGGTCATCGTGCGCC 61.630 66.667 4.18 0.00 40.32 6.53
761 1159 4.141965 ATCGGTCATCGTGCGCCA 62.142 61.111 4.18 0.00 40.32 5.69
773 1171 2.257302 TGCGCCAAGATTCGTGCAA 61.257 52.632 4.18 0.00 42.19 4.08
777 1175 2.327568 CGCCAAGATTCGTGCAAAAAT 58.672 42.857 0.00 0.00 0.00 1.82
780 1178 4.384247 CGCCAAGATTCGTGCAAAAATAAA 59.616 37.500 0.00 0.00 0.00 1.40
781 1179 5.062058 CGCCAAGATTCGTGCAAAAATAAAT 59.938 36.000 0.00 0.00 0.00 1.40
961 1363 3.866582 CCATCCCCACCGAGCTCC 61.867 72.222 8.47 0.00 0.00 4.70
980 1382 1.768888 AAGAACTCCCACCACCCGT 60.769 57.895 0.00 0.00 0.00 5.28
1319 1721 2.743928 CACCTTCGAGCAGGCCAC 60.744 66.667 5.01 0.00 37.47 5.01
1410 1812 0.338120 AGGTCCTCTCCTCCCTCTTG 59.662 60.000 0.00 0.00 31.32 3.02
1425 1827 0.391661 TCTTGCCTCGCCATTGACTC 60.392 55.000 0.00 0.00 0.00 3.36
1429 1831 0.809241 GCCTCGCCATTGACTCTCTG 60.809 60.000 0.00 0.00 0.00 3.35
1434 1836 1.067283 CGCCATTGACTCTCTGTCTGT 60.067 52.381 0.00 0.00 45.54 3.41
1437 1839 3.194542 GCCATTGACTCTCTGTCTGTACT 59.805 47.826 0.00 0.00 45.54 2.73
1446 1848 5.416326 ACTCTCTGTCTGTACTGTACCATTC 59.584 44.000 14.91 4.53 0.00 2.67
1449 1851 6.598457 TCTCTGTCTGTACTGTACCATTCTAC 59.402 42.308 14.91 5.35 0.00 2.59
1483 1890 0.976641 AGCGAGGTTCAGATTGTCCA 59.023 50.000 0.00 0.00 0.00 4.02
1493 1901 7.886338 AGGTTCAGATTGTCCACTTAATTTTC 58.114 34.615 0.00 0.00 0.00 2.29
1641 2057 1.194495 AGTTTGTCGTCGTCGTTGAC 58.806 50.000 1.33 11.09 38.33 3.18
1739 2155 0.771127 AACCAAGTAAGGCTGCAGGA 59.229 50.000 17.12 0.00 0.00 3.86
1851 2267 5.854866 CGATTTATACTTCAAGACGCCGATA 59.145 40.000 0.00 0.00 0.00 2.92
1908 2324 1.967319 TGGAAGGAGTTGTTGAGCAC 58.033 50.000 0.00 0.00 0.00 4.40
2020 2440 6.556212 TGTTGTTGATGTGTTGAATTTACGT 58.444 32.000 0.00 0.00 0.00 3.57
2167 3409 7.331687 GGATAAAACACCACTTCAATTGATTGG 59.668 37.037 25.09 25.09 38.30 3.16
2188 3430 2.421424 GAGCCCTTGTGATCATGACAAC 59.579 50.000 0.00 0.00 0.00 3.32
2199 3441 7.104939 TGTGATCATGACAACTCAATGACATA 58.895 34.615 0.00 0.00 34.68 2.29
2200 3442 7.771826 TGTGATCATGACAACTCAATGACATAT 59.228 33.333 0.00 0.00 34.68 1.78
2215 3457 7.779326 TCAATGACATATTAATCTTCTTGGGCA 59.221 33.333 0.00 0.00 0.00 5.36
2379 3629 7.170998 CGGCTTATAGATGTACCTGTTAAAAGG 59.829 40.741 10.41 10.41 43.57 3.11
2443 7035 5.009310 TGCATATCCATGTGATCTTTCAAGC 59.991 40.000 0.00 0.00 34.76 4.01
2447 7039 2.426024 CCATGTGATCTTTCAAGCCAGG 59.574 50.000 0.00 0.00 32.48 4.45
2623 7223 6.618287 TTTGGAGTTGTATTCACAAGACAG 57.382 37.500 0.00 0.00 45.18 3.51
2697 7297 1.405872 ACACAGTGGAACGGTACAGA 58.594 50.000 5.31 0.00 45.56 3.41
2716 7316 6.917217 ACAGACTGAAGCTAATAAAGATGC 57.083 37.500 10.08 0.00 0.00 3.91
2736 7336 9.737844 AAGATGCAAAATTATTGTGGGTTTATT 57.262 25.926 0.00 0.00 0.00 1.40
2938 7635 4.430765 CGCTGCCGGTAGGACGTT 62.431 66.667 21.82 0.00 41.02 3.99
2954 7651 3.305964 GACGTTGTGTCGAATCTCTTCA 58.694 45.455 0.00 0.00 37.96 3.02
2960 7657 2.094494 GTGTCGAATCTCTTCAGCCTCA 60.094 50.000 0.00 0.00 0.00 3.86
3160 7861 1.033746 ATGCCAGTGGGAATTCAGCG 61.034 55.000 7.73 0.00 35.59 5.18
3226 7927 3.258123 TCAATCTGGTGAGAATGTCGACA 59.742 43.478 22.48 22.48 31.81 4.35
3301 8004 2.965831 TGTAGCTTGTCTTGTCTGGTCT 59.034 45.455 0.00 0.00 0.00 3.85
3302 8005 3.388024 TGTAGCTTGTCTTGTCTGGTCTT 59.612 43.478 0.00 0.00 0.00 3.01
3303 8006 3.118905 AGCTTGTCTTGTCTGGTCTTC 57.881 47.619 0.00 0.00 0.00 2.87
3304 8007 2.703007 AGCTTGTCTTGTCTGGTCTTCT 59.297 45.455 0.00 0.00 0.00 2.85
3305 8008 2.805099 GCTTGTCTTGTCTGGTCTTCTG 59.195 50.000 0.00 0.00 0.00 3.02
3306 8009 3.742640 GCTTGTCTTGTCTGGTCTTCTGT 60.743 47.826 0.00 0.00 0.00 3.41
3307 8010 3.735237 TGTCTTGTCTGGTCTTCTGTC 57.265 47.619 0.00 0.00 0.00 3.51
3308 8011 3.300388 TGTCTTGTCTGGTCTTCTGTCT 58.700 45.455 0.00 0.00 0.00 3.41
3309 8012 3.068732 TGTCTTGTCTGGTCTTCTGTCTG 59.931 47.826 0.00 0.00 0.00 3.51
3310 8013 2.630098 TCTTGTCTGGTCTTCTGTCTGG 59.370 50.000 0.00 0.00 0.00 3.86
3311 8014 2.088104 TGTCTGGTCTTCTGTCTGGT 57.912 50.000 0.00 0.00 0.00 4.00
3312 8015 1.964223 TGTCTGGTCTTCTGTCTGGTC 59.036 52.381 0.00 0.00 0.00 4.02
3393 8099 9.450807 GCATAATATTTGATCAAAGTACACACC 57.549 33.333 24.17 7.43 33.32 4.16
3404 8110 0.790207 GTACACACCATGCGTCACAG 59.210 55.000 0.00 0.00 0.00 3.66
3430 8136 5.921976 TGTACTACACATAAGGTTTCACACG 59.078 40.000 0.00 0.00 30.04 4.49
3440 8146 1.666700 GGTTTCACACGTGCACTTACA 59.333 47.619 17.22 0.00 0.00 2.41
3452 8158 4.023193 CGTGCACTTACAAGGAAAAGGAAT 60.023 41.667 16.19 0.00 0.00 3.01
3493 8199 6.846325 ACGAAGGCAGCTAAAAGTAATATC 57.154 37.500 0.00 0.00 0.00 1.63
3494 8200 5.758784 ACGAAGGCAGCTAAAAGTAATATCC 59.241 40.000 0.00 0.00 0.00 2.59
3495 8201 5.107453 CGAAGGCAGCTAAAAGTAATATCCG 60.107 44.000 0.00 0.00 0.00 4.18
3496 8202 4.642429 AGGCAGCTAAAAGTAATATCCGG 58.358 43.478 0.00 0.00 0.00 5.14
3497 8203 4.347000 AGGCAGCTAAAAGTAATATCCGGA 59.653 41.667 6.61 6.61 0.00 5.14
3498 8204 5.013183 AGGCAGCTAAAAGTAATATCCGGAT 59.987 40.000 22.95 22.95 0.00 4.18
3499 8205 5.122396 GGCAGCTAAAAGTAATATCCGGATG 59.878 44.000 27.55 7.39 0.00 3.51
3500 8206 5.932303 GCAGCTAAAAGTAATATCCGGATGA 59.068 40.000 27.55 11.34 0.00 2.92
3501 8207 6.091441 GCAGCTAAAAGTAATATCCGGATGAG 59.909 42.308 27.55 2.05 0.00 2.90
3502 8208 7.378966 CAGCTAAAAGTAATATCCGGATGAGA 58.621 38.462 27.55 7.63 0.00 3.27
3503 8209 8.037758 CAGCTAAAAGTAATATCCGGATGAGAT 58.962 37.037 27.55 9.92 0.00 2.75
3504 8210 8.037758 AGCTAAAAGTAATATCCGGATGAGATG 58.962 37.037 27.55 7.50 0.00 2.90
3505 8211 7.819900 GCTAAAAGTAATATCCGGATGAGATGT 59.180 37.037 27.55 1.29 0.00 3.06
3508 8214 7.411486 AAGTAATATCCGGATGAGATGTAGG 57.589 40.000 27.55 0.00 0.00 3.18
3509 8215 6.732487 AGTAATATCCGGATGAGATGTAGGA 58.268 40.000 27.55 2.62 0.00 2.94
3510 8216 7.358263 AGTAATATCCGGATGAGATGTAGGAT 58.642 38.462 27.55 5.17 40.99 3.24
3511 8217 7.841729 AGTAATATCCGGATGAGATGTAGGATT 59.158 37.037 27.55 15.67 39.07 3.01
3512 8218 7.502060 AATATCCGGATGAGATGTAGGATTT 57.498 36.000 27.55 0.00 39.07 2.17
3513 8219 4.873746 TCCGGATGAGATGTAGGATTTC 57.126 45.455 0.00 0.00 0.00 2.17
3514 8220 3.578716 TCCGGATGAGATGTAGGATTTCC 59.421 47.826 0.00 0.00 0.00 3.13
3515 8221 3.579709 CGGATGAGATGTAGGATTTCCG 58.420 50.000 0.00 0.00 42.08 4.30
3516 8222 3.615110 CGGATGAGATGTAGGATTTCCGG 60.615 52.174 0.00 0.00 40.78 5.14
3517 8223 2.910688 TGAGATGTAGGATTTCCGGC 57.089 50.000 0.00 0.00 42.08 6.13
3518 8224 2.115427 TGAGATGTAGGATTTCCGGCA 58.885 47.619 0.00 0.00 42.08 5.69
3519 8225 2.503765 TGAGATGTAGGATTTCCGGCAA 59.496 45.455 0.00 0.00 42.08 4.52
3520 8226 3.134458 GAGATGTAGGATTTCCGGCAAG 58.866 50.000 0.00 0.00 42.08 4.01
3521 8227 2.158755 AGATGTAGGATTTCCGGCAAGG 60.159 50.000 0.00 0.00 42.08 3.61
3522 8228 0.254747 TGTAGGATTTCCGGCAAGGG 59.745 55.000 0.00 0.00 42.08 3.95
3523 8229 0.465642 GTAGGATTTCCGGCAAGGGG 60.466 60.000 0.00 0.00 42.08 4.79
3524 8230 2.279037 TAGGATTTCCGGCAAGGGGC 62.279 60.000 0.00 0.00 42.08 5.80
3533 8239 3.965780 GGCAAGGGGCGATAAAATG 57.034 52.632 0.00 0.00 46.16 2.32
3534 8240 1.398692 GGCAAGGGGCGATAAAATGA 58.601 50.000 0.00 0.00 46.16 2.57
3535 8241 1.067060 GGCAAGGGGCGATAAAATGAC 59.933 52.381 0.00 0.00 46.16 3.06
3536 8242 1.748493 GCAAGGGGCGATAAAATGACA 59.252 47.619 0.00 0.00 0.00 3.58
3537 8243 2.479560 GCAAGGGGCGATAAAATGACAC 60.480 50.000 0.00 0.00 0.00 3.67
3538 8244 3.016736 CAAGGGGCGATAAAATGACACT 58.983 45.455 0.00 0.00 0.00 3.55
3539 8245 3.366052 AGGGGCGATAAAATGACACTT 57.634 42.857 0.00 0.00 0.00 3.16
3540 8246 3.697166 AGGGGCGATAAAATGACACTTT 58.303 40.909 0.00 0.00 0.00 2.66
3541 8247 4.850680 AGGGGCGATAAAATGACACTTTA 58.149 39.130 0.00 0.00 0.00 1.85
3542 8248 5.258051 AGGGGCGATAAAATGACACTTTAA 58.742 37.500 0.00 0.00 0.00 1.52
3543 8249 5.891551 AGGGGCGATAAAATGACACTTTAAT 59.108 36.000 0.00 0.00 0.00 1.40
3544 8250 6.379988 AGGGGCGATAAAATGACACTTTAATT 59.620 34.615 0.00 0.00 0.00 1.40
3545 8251 7.039270 GGGGCGATAAAATGACACTTTAATTT 58.961 34.615 0.00 0.00 0.00 1.82
3546 8252 7.010091 GGGGCGATAAAATGACACTTTAATTTG 59.990 37.037 0.00 0.00 0.00 2.32
3547 8253 7.544217 GGGCGATAAAATGACACTTTAATTTGT 59.456 33.333 0.00 0.00 0.00 2.83
3548 8254 8.372521 GGCGATAAAATGACACTTTAATTTGTG 58.627 33.333 0.00 0.00 39.80 3.33
3549 8255 8.372521 GCGATAAAATGACACTTTAATTTGTGG 58.627 33.333 0.00 0.00 38.39 4.17
3550 8256 8.859156 CGATAAAATGACACTTTAATTTGTGGG 58.141 33.333 0.00 0.00 38.39 4.61
3551 8257 9.921637 GATAAAATGACACTTTAATTTGTGGGA 57.078 29.630 0.00 0.00 38.39 4.37
3554 8260 8.606040 AAATGACACTTTAATTTGTGGGATTG 57.394 30.769 9.59 0.00 38.39 2.67
3555 8261 6.968263 TGACACTTTAATTTGTGGGATTGA 57.032 33.333 9.59 0.00 38.39 2.57
3556 8262 7.353414 TGACACTTTAATTTGTGGGATTGAA 57.647 32.000 9.59 0.00 38.39 2.69
3557 8263 7.432869 TGACACTTTAATTTGTGGGATTGAAG 58.567 34.615 9.59 0.00 38.39 3.02
3558 8264 6.758254 ACACTTTAATTTGTGGGATTGAAGG 58.242 36.000 9.59 0.34 35.56 3.46
3559 8265 6.326323 ACACTTTAATTTGTGGGATTGAAGGT 59.674 34.615 9.59 0.79 35.56 3.50
3560 8266 7.147567 ACACTTTAATTTGTGGGATTGAAGGTT 60.148 33.333 9.59 0.00 35.56 3.50
3561 8267 7.171337 CACTTTAATTTGTGGGATTGAAGGTTG 59.829 37.037 6.39 0.00 35.56 3.77
3562 8268 6.739331 TTAATTTGTGGGATTGAAGGTTGT 57.261 33.333 0.00 0.00 0.00 3.32
3563 8269 5.628797 AATTTGTGGGATTGAAGGTTGTT 57.371 34.783 0.00 0.00 0.00 2.83
3564 8270 4.399004 TTTGTGGGATTGAAGGTTGTTG 57.601 40.909 0.00 0.00 0.00 3.33
3565 8271 3.304911 TGTGGGATTGAAGGTTGTTGA 57.695 42.857 0.00 0.00 0.00 3.18
3566 8272 3.636679 TGTGGGATTGAAGGTTGTTGAA 58.363 40.909 0.00 0.00 0.00 2.69
3567 8273 4.026744 TGTGGGATTGAAGGTTGTTGAAA 58.973 39.130 0.00 0.00 0.00 2.69
3568 8274 4.653341 TGTGGGATTGAAGGTTGTTGAAAT 59.347 37.500 0.00 0.00 0.00 2.17
3569 8275 5.835819 TGTGGGATTGAAGGTTGTTGAAATA 59.164 36.000 0.00 0.00 0.00 1.40
3570 8276 6.496565 TGTGGGATTGAAGGTTGTTGAAATAT 59.503 34.615 0.00 0.00 0.00 1.28
3571 8277 7.016072 TGTGGGATTGAAGGTTGTTGAAATATT 59.984 33.333 0.00 0.00 0.00 1.28
3572 8278 7.877612 GTGGGATTGAAGGTTGTTGAAATATTT 59.122 33.333 0.00 0.00 0.00 1.40
3573 8279 8.093927 TGGGATTGAAGGTTGTTGAAATATTTC 58.906 33.333 19.37 19.37 37.69 2.17
3574 8280 8.314021 GGGATTGAAGGTTGTTGAAATATTTCT 58.686 33.333 24.77 5.98 38.02 2.52
3575 8281 9.143631 GGATTGAAGGTTGTTGAAATATTTCTG 57.856 33.333 24.77 0.00 38.02 3.02
3576 8282 9.912634 GATTGAAGGTTGTTGAAATATTTCTGA 57.087 29.630 24.77 13.32 38.02 3.27
3578 8284 9.695526 TTGAAGGTTGTTGAAATATTTCTGATG 57.304 29.630 24.77 0.00 38.02 3.07
3579 8285 9.076781 TGAAGGTTGTTGAAATATTTCTGATGA 57.923 29.630 24.77 5.56 38.02 2.92
3580 8286 9.912634 GAAGGTTGTTGAAATATTTCTGATGAA 57.087 29.630 24.77 10.78 38.02 2.57
3581 8287 9.918630 AAGGTTGTTGAAATATTTCTGATGAAG 57.081 29.630 24.77 0.00 38.02 3.02
3582 8288 9.300681 AGGTTGTTGAAATATTTCTGATGAAGA 57.699 29.630 24.77 9.56 38.02 2.87
3583 8289 9.912634 GGTTGTTGAAATATTTCTGATGAAGAA 57.087 29.630 24.77 14.02 43.37 2.52
3612 8318 9.330063 AGTACTATGTTGATTATGTGATTGGTG 57.670 33.333 0.00 0.00 0.00 4.17
3613 8319 9.325198 GTACTATGTTGATTATGTGATTGGTGA 57.675 33.333 0.00 0.00 0.00 4.02
3614 8320 8.985315 ACTATGTTGATTATGTGATTGGTGAT 57.015 30.769 0.00 0.00 0.00 3.06
3615 8321 8.843262 ACTATGTTGATTATGTGATTGGTGATG 58.157 33.333 0.00 0.00 0.00 3.07
3616 8322 7.649533 ATGTTGATTATGTGATTGGTGATGT 57.350 32.000 0.00 0.00 0.00 3.06
3617 8323 7.465353 TGTTGATTATGTGATTGGTGATGTT 57.535 32.000 0.00 0.00 0.00 2.71
3618 8324 8.572855 TGTTGATTATGTGATTGGTGATGTTA 57.427 30.769 0.00 0.00 0.00 2.41
3619 8325 9.018582 TGTTGATTATGTGATTGGTGATGTTAA 57.981 29.630 0.00 0.00 0.00 2.01
3620 8326 9.289303 GTTGATTATGTGATTGGTGATGTTAAC 57.711 33.333 0.00 0.00 0.00 2.01
3621 8327 8.572855 TGATTATGTGATTGGTGATGTTAACA 57.427 30.769 11.41 11.41 0.00 2.41
3622 8328 9.018582 TGATTATGTGATTGGTGATGTTAACAA 57.981 29.630 13.23 0.00 0.00 2.83
3623 8329 9.853555 GATTATGTGATTGGTGATGTTAACAAA 57.146 29.630 13.23 2.05 0.00 2.83
3624 8330 9.859427 ATTATGTGATTGGTGATGTTAACAAAG 57.141 29.630 13.23 0.00 0.00 2.77
3625 8331 5.527951 TGTGATTGGTGATGTTAACAAAGC 58.472 37.500 13.23 13.65 0.00 3.51
3626 8332 5.068329 TGTGATTGGTGATGTTAACAAAGCA 59.932 36.000 13.23 15.98 0.00 3.91
3627 8333 6.158598 GTGATTGGTGATGTTAACAAAGCAT 58.841 36.000 20.56 13.63 30.15 3.79
3628 8334 6.089820 GTGATTGGTGATGTTAACAAAGCATG 59.910 38.462 20.56 0.00 30.15 4.06
3629 8335 3.911868 TGGTGATGTTAACAAAGCATGC 58.088 40.909 13.23 10.51 0.00 4.06
3630 8336 3.320256 TGGTGATGTTAACAAAGCATGCA 59.680 39.130 21.98 0.00 0.00 3.96
3631 8337 4.202192 TGGTGATGTTAACAAAGCATGCAA 60.202 37.500 21.98 0.36 0.00 4.08
3632 8338 4.931002 GGTGATGTTAACAAAGCATGCAAT 59.069 37.500 21.98 5.17 0.00 3.56
3653 8359 9.299465 TGCAATGAAATATGAATAATAGCTGGA 57.701 29.630 0.00 0.00 0.00 3.86
3665 8371 9.778741 TGAATAATAGCTGGATGTTAACTAAGG 57.221 33.333 7.22 0.00 0.00 2.69
3666 8372 9.220767 GAATAATAGCTGGATGTTAACTAAGGG 57.779 37.037 7.22 0.00 0.00 3.95
3667 8373 6.576778 AATAGCTGGATGTTAACTAAGGGT 57.423 37.500 7.22 2.36 0.00 4.34
3668 8374 4.222124 AGCTGGATGTTAACTAAGGGTG 57.778 45.455 7.22 0.00 0.00 4.61
3669 8375 3.587506 AGCTGGATGTTAACTAAGGGTGT 59.412 43.478 7.22 0.00 0.00 4.16
3670 8376 4.042934 AGCTGGATGTTAACTAAGGGTGTT 59.957 41.667 7.22 0.00 0.00 3.32
3671 8377 4.765339 GCTGGATGTTAACTAAGGGTGTTT 59.235 41.667 7.22 0.00 0.00 2.83
3672 8378 5.335661 GCTGGATGTTAACTAAGGGTGTTTG 60.336 44.000 7.22 0.00 0.00 2.93
3673 8379 5.697067 TGGATGTTAACTAAGGGTGTTTGT 58.303 37.500 7.22 0.00 0.00 2.83
3674 8380 5.533154 TGGATGTTAACTAAGGGTGTTTGTG 59.467 40.000 7.22 0.00 0.00 3.33
3675 8381 5.533528 GGATGTTAACTAAGGGTGTTTGTGT 59.466 40.000 7.22 0.00 0.00 3.72
3676 8382 5.821516 TGTTAACTAAGGGTGTTTGTGTG 57.178 39.130 7.22 0.00 0.00 3.82
3677 8383 5.254901 TGTTAACTAAGGGTGTTTGTGTGT 58.745 37.500 7.22 0.00 0.00 3.72
3678 8384 5.124138 TGTTAACTAAGGGTGTTTGTGTGTG 59.876 40.000 7.22 0.00 0.00 3.82
3679 8385 3.359695 ACTAAGGGTGTTTGTGTGTGT 57.640 42.857 0.00 0.00 0.00 3.72
3680 8386 4.490899 ACTAAGGGTGTTTGTGTGTGTA 57.509 40.909 0.00 0.00 0.00 2.90
3681 8387 5.043737 ACTAAGGGTGTTTGTGTGTGTAT 57.956 39.130 0.00 0.00 0.00 2.29
3682 8388 6.177310 ACTAAGGGTGTTTGTGTGTGTATA 57.823 37.500 0.00 0.00 0.00 1.47
3683 8389 5.993441 ACTAAGGGTGTTTGTGTGTGTATAC 59.007 40.000 0.00 0.00 0.00 1.47
3684 8390 4.699925 AGGGTGTTTGTGTGTGTATACT 57.300 40.909 4.17 0.00 0.00 2.12
3685 8391 4.638304 AGGGTGTTTGTGTGTGTATACTC 58.362 43.478 4.17 0.83 0.00 2.59
3686 8392 3.430895 GGGTGTTTGTGTGTGTATACTCG 59.569 47.826 4.17 0.00 0.00 4.18
3687 8393 3.430895 GGTGTTTGTGTGTGTATACTCGG 59.569 47.826 4.17 0.00 0.00 4.63
3688 8394 3.430895 GTGTTTGTGTGTGTATACTCGGG 59.569 47.826 4.17 0.00 0.00 5.14
3689 8395 2.997986 GTTTGTGTGTGTATACTCGGGG 59.002 50.000 4.17 0.00 0.00 5.73
3690 8396 1.927487 TGTGTGTGTATACTCGGGGT 58.073 50.000 4.17 0.00 0.00 4.95
3691 8397 2.250031 TGTGTGTGTATACTCGGGGTT 58.750 47.619 4.17 0.00 0.00 4.11
3692 8398 2.633967 TGTGTGTGTATACTCGGGGTTT 59.366 45.455 4.17 0.00 0.00 3.27
3693 8399 3.071312 TGTGTGTGTATACTCGGGGTTTT 59.929 43.478 4.17 0.00 0.00 2.43
3694 8400 3.681417 GTGTGTGTATACTCGGGGTTTTC 59.319 47.826 4.17 0.00 0.00 2.29
3695 8401 3.579586 TGTGTGTATACTCGGGGTTTTCT 59.420 43.478 4.17 0.00 0.00 2.52
3696 8402 3.930848 GTGTGTATACTCGGGGTTTTCTG 59.069 47.826 4.17 0.00 0.00 3.02
3697 8403 2.934553 GTGTATACTCGGGGTTTTCTGC 59.065 50.000 4.17 0.00 0.00 4.26
3698 8404 2.093341 TGTATACTCGGGGTTTTCTGCC 60.093 50.000 4.17 0.00 0.00 4.85
3699 8405 0.255033 ATACTCGGGGTTTTCTGCCC 59.745 55.000 0.00 0.00 45.35 5.36
3709 8415 4.350245 GGGTTTTCTGCCCCTACTTTTAT 58.650 43.478 0.00 0.00 40.26 1.40
3713 8419 6.420638 GTTTTCTGCCCCTACTTTTATCCTA 58.579 40.000 0.00 0.00 0.00 2.94
3837 8543 1.217244 GTACGTGCCGGTGATCCTT 59.783 57.895 1.90 0.00 0.00 3.36
3907 10262 2.249139 GACCTGGACTGGTAACTGACT 58.751 52.381 0.00 0.00 41.00 3.41
4019 10374 7.606456 TCCACAATCCTCTGTACTTTAAATGAC 59.394 37.037 0.00 0.00 0.00 3.06
4069 10424 7.535997 CAATTGTCTTCATCATCAGAACATGT 58.464 34.615 0.00 0.00 0.00 3.21
4082 10438 7.701924 TCATCAGAACATGTTGTCTTGTTTTTC 59.298 33.333 17.58 0.00 40.40 2.29
4234 15785 2.694628 GAGGCAATGGGATGTGCAAATA 59.305 45.455 0.00 0.00 42.74 1.40
4305 15865 8.021973 TCTCTAGAAAAATGACTCGTACACTTC 58.978 37.037 0.00 0.00 0.00 3.01
4585 16161 7.688167 GTGAAACATCATATGTCACAACTTACG 59.312 37.037 15.06 0.00 44.07 3.18
4606 16182 5.915175 ACGAGAAGGAACTGTAACTTTTCT 58.085 37.500 10.82 8.14 40.86 2.52
4640 16224 9.074576 GGGAAGAAGGAATTGTAACTTAAAGAA 57.925 33.333 0.00 0.00 0.00 2.52
4709 16301 3.997681 CTCATAGATGCAGCATCCTGAAG 59.002 47.826 28.57 18.11 41.36 3.02
4734 16326 4.005650 TGCAGATGTTTAGCCAAGAGAAG 58.994 43.478 0.00 0.00 0.00 2.85
4740 16332 4.397420 TGTTTAGCCAAGAGAAGAATGCA 58.603 39.130 0.00 0.00 0.00 3.96
4751 16343 3.679389 AGAAGAATGCAACATTCGGAGT 58.321 40.909 13.12 2.71 33.51 3.85
4752 16344 4.074970 AGAAGAATGCAACATTCGGAGTT 58.925 39.130 13.12 4.06 33.51 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.800582 GCATATGACCACGGATGAAGATGA 60.801 45.833 6.97 0.00 0.00 2.92
1 2 3.434641 GCATATGACCACGGATGAAGATG 59.565 47.826 6.97 0.00 0.00 2.90
2 3 3.071457 TGCATATGACCACGGATGAAGAT 59.929 43.478 6.97 0.00 0.00 2.40
3 4 2.433970 TGCATATGACCACGGATGAAGA 59.566 45.455 6.97 0.00 0.00 2.87
4 5 2.837498 TGCATATGACCACGGATGAAG 58.163 47.619 6.97 0.00 0.00 3.02
6 7 2.170397 AGTTGCATATGACCACGGATGA 59.830 45.455 6.97 0.00 0.00 2.92
7 8 2.564771 AGTTGCATATGACCACGGATG 58.435 47.619 6.97 0.00 0.00 3.51
8 9 3.206150 GAAGTTGCATATGACCACGGAT 58.794 45.455 6.97 0.00 0.00 4.18
9 10 2.027653 TGAAGTTGCATATGACCACGGA 60.028 45.455 6.97 0.00 0.00 4.69
10 11 2.352651 CTGAAGTTGCATATGACCACGG 59.647 50.000 6.97 0.00 0.00 4.94
11 12 3.261580 TCTGAAGTTGCATATGACCACG 58.738 45.455 6.97 0.00 0.00 4.94
12 13 4.437930 GCTTCTGAAGTTGCATATGACCAC 60.438 45.833 17.97 0.00 0.00 4.16
13 14 3.691118 GCTTCTGAAGTTGCATATGACCA 59.309 43.478 17.97 0.00 0.00 4.02
14 15 3.065925 GGCTTCTGAAGTTGCATATGACC 59.934 47.826 17.97 3.86 0.00 4.02
15 16 3.691118 TGGCTTCTGAAGTTGCATATGAC 59.309 43.478 17.97 0.00 0.00 3.06
16 17 3.954200 TGGCTTCTGAAGTTGCATATGA 58.046 40.909 17.97 0.00 0.00 2.15
17 18 4.707030 TTGGCTTCTGAAGTTGCATATG 57.293 40.909 17.97 0.00 0.00 1.78
18 19 4.523943 TGTTTGGCTTCTGAAGTTGCATAT 59.476 37.500 17.97 0.00 0.00 1.78
19 20 3.888323 TGTTTGGCTTCTGAAGTTGCATA 59.112 39.130 17.97 0.33 0.00 3.14
20 21 2.694628 TGTTTGGCTTCTGAAGTTGCAT 59.305 40.909 17.97 0.00 0.00 3.96
21 22 2.098614 TGTTTGGCTTCTGAAGTTGCA 58.901 42.857 17.97 8.26 0.00 4.08
22 23 2.869233 TGTTTGGCTTCTGAAGTTGC 57.131 45.000 17.97 5.51 0.00 4.17
23 24 7.951530 ATTTATTGTTTGGCTTCTGAAGTTG 57.048 32.000 17.97 0.00 0.00 3.16
24 25 8.369218 CAATTTATTGTTTGGCTTCTGAAGTT 57.631 30.769 17.97 0.00 33.22 2.66
25 26 7.951530 CAATTTATTGTTTGGCTTCTGAAGT 57.048 32.000 17.97 0.00 33.22 3.01
40 41 7.973388 TCCGAGGCAAATTTCTACAATTTATTG 59.027 33.333 1.03 1.03 43.26 1.90
41 42 8.062065 TCCGAGGCAAATTTCTACAATTTATT 57.938 30.769 0.00 0.00 0.00 1.40
42 43 7.639113 TCCGAGGCAAATTTCTACAATTTAT 57.361 32.000 0.00 0.00 0.00 1.40
43 44 7.175990 ACTTCCGAGGCAAATTTCTACAATTTA 59.824 33.333 0.00 0.00 0.00 1.40
44 45 5.975693 TCCGAGGCAAATTTCTACAATTT 57.024 34.783 0.00 0.00 0.00 1.82
45 46 5.476945 ACTTCCGAGGCAAATTTCTACAATT 59.523 36.000 0.00 0.00 0.00 2.32
46 47 5.010282 ACTTCCGAGGCAAATTTCTACAAT 58.990 37.500 0.00 0.00 0.00 2.71
47 48 4.394729 ACTTCCGAGGCAAATTTCTACAA 58.605 39.130 0.00 0.00 0.00 2.41
48 49 4.015872 ACTTCCGAGGCAAATTTCTACA 57.984 40.909 0.00 0.00 0.00 2.74
49 50 4.454504 TGAACTTCCGAGGCAAATTTCTAC 59.545 41.667 0.00 0.00 0.00 2.59
50 51 4.647611 TGAACTTCCGAGGCAAATTTCTA 58.352 39.130 0.00 0.00 0.00 2.10
51 52 3.486383 TGAACTTCCGAGGCAAATTTCT 58.514 40.909 0.00 0.00 0.00 2.52
52 53 3.915437 TGAACTTCCGAGGCAAATTTC 57.085 42.857 0.00 0.00 0.00 2.17
53 54 3.056607 CCATGAACTTCCGAGGCAAATTT 60.057 43.478 0.00 0.00 0.00 1.82
54 55 2.493278 CCATGAACTTCCGAGGCAAATT 59.507 45.455 0.00 0.00 0.00 1.82
55 56 2.094675 CCATGAACTTCCGAGGCAAAT 58.905 47.619 0.00 0.00 0.00 2.32
56 57 1.533625 CCATGAACTTCCGAGGCAAA 58.466 50.000 0.00 0.00 0.00 3.68
57 58 0.960364 GCCATGAACTTCCGAGGCAA 60.960 55.000 0.00 0.00 41.63 4.52
58 59 1.377202 GCCATGAACTTCCGAGGCA 60.377 57.895 0.00 0.00 41.63 4.75
59 60 0.178068 TAGCCATGAACTTCCGAGGC 59.822 55.000 0.00 7.72 42.31 4.70
60 61 1.207089 TGTAGCCATGAACTTCCGAGG 59.793 52.381 0.00 0.00 0.00 4.63
61 62 2.672961 TGTAGCCATGAACTTCCGAG 57.327 50.000 0.00 0.00 0.00 4.63
62 63 3.449377 TGTATGTAGCCATGAACTTCCGA 59.551 43.478 0.00 0.00 32.29 4.55
63 64 3.792401 TGTATGTAGCCATGAACTTCCG 58.208 45.455 0.00 0.00 32.29 4.30
64 65 4.130118 CCTGTATGTAGCCATGAACTTCC 58.870 47.826 0.00 0.00 32.29 3.46
65 66 4.130118 CCCTGTATGTAGCCATGAACTTC 58.870 47.826 0.00 0.00 32.29 3.01
66 67 3.523564 ACCCTGTATGTAGCCATGAACTT 59.476 43.478 0.00 0.00 32.29 2.66
67 68 3.115390 ACCCTGTATGTAGCCATGAACT 58.885 45.455 0.00 0.00 32.29 3.01
68 69 3.560636 ACCCTGTATGTAGCCATGAAC 57.439 47.619 0.00 0.00 32.29 3.18
69 70 4.719773 AGTTACCCTGTATGTAGCCATGAA 59.280 41.667 0.00 0.00 32.29 2.57
70 71 4.100963 CAGTTACCCTGTATGTAGCCATGA 59.899 45.833 0.00 0.00 36.37 3.07
71 72 4.380531 CAGTTACCCTGTATGTAGCCATG 58.619 47.826 0.00 0.00 36.37 3.66
72 73 3.181454 GCAGTTACCCTGTATGTAGCCAT 60.181 47.826 0.00 0.00 43.55 4.40
73 74 2.169769 GCAGTTACCCTGTATGTAGCCA 59.830 50.000 0.00 0.00 43.55 4.75
74 75 2.484947 GGCAGTTACCCTGTATGTAGCC 60.485 54.545 0.00 0.00 43.55 3.93
75 76 2.835027 GGCAGTTACCCTGTATGTAGC 58.165 52.381 0.00 0.00 43.55 3.58
92 93 5.221541 ACGTAAATCTTGGAATTTTTGGGCA 60.222 36.000 0.00 0.00 31.50 5.36
94 95 7.544217 CCTTACGTAAATCTTGGAATTTTTGGG 59.456 37.037 9.68 0.00 31.50 4.12
101 102 5.123344 GTGCACCTTACGTAAATCTTGGAAT 59.877 40.000 15.29 0.00 0.00 3.01
104 105 3.749088 TGTGCACCTTACGTAAATCTTGG 59.251 43.478 15.69 9.04 0.00 3.61
107 108 2.991190 CGTGTGCACCTTACGTAAATCT 59.009 45.455 15.69 0.00 33.48 2.40
114 115 1.593209 ACACCGTGTGCACCTTACG 60.593 57.895 18.33 18.33 36.98 3.18
115 116 1.938861 CACACCGTGTGCACCTTAC 59.061 57.895 18.38 4.94 41.89 2.34
116 117 4.447544 CACACCGTGTGCACCTTA 57.552 55.556 18.38 0.00 41.89 2.69
126 127 1.523711 CAGTTCCTGCACACACCGT 60.524 57.895 0.00 0.00 0.00 4.83
127 128 0.603707 ATCAGTTCCTGCACACACCG 60.604 55.000 0.00 0.00 0.00 4.94
128 129 1.609208 AATCAGTTCCTGCACACACC 58.391 50.000 0.00 0.00 0.00 4.16
130 131 3.253188 GCTAAAATCAGTTCCTGCACACA 59.747 43.478 0.00 0.00 0.00 3.72
131 132 3.503748 AGCTAAAATCAGTTCCTGCACAC 59.496 43.478 0.00 0.00 0.00 3.82
132 133 3.754965 AGCTAAAATCAGTTCCTGCACA 58.245 40.909 0.00 0.00 0.00 4.57
133 134 4.773323 AAGCTAAAATCAGTTCCTGCAC 57.227 40.909 0.00 0.00 0.00 4.57
134 135 5.789643 AAAAGCTAAAATCAGTTCCTGCA 57.210 34.783 0.00 0.00 0.00 4.41
135 136 6.677913 TGTAAAAGCTAAAATCAGTTCCTGC 58.322 36.000 0.00 0.00 0.00 4.85
136 137 7.970614 GGATGTAAAAGCTAAAATCAGTTCCTG 59.029 37.037 0.00 0.00 0.00 3.86
137 138 7.148239 CGGATGTAAAAGCTAAAATCAGTTCCT 60.148 37.037 0.00 0.00 0.00 3.36
138 139 6.967199 CGGATGTAAAAGCTAAAATCAGTTCC 59.033 38.462 0.00 0.00 0.00 3.62
139 140 7.527457 ACGGATGTAAAAGCTAAAATCAGTTC 58.473 34.615 0.00 0.00 0.00 3.01
142 145 7.072177 TGACGGATGTAAAAGCTAAAATCAG 57.928 36.000 0.00 0.00 0.00 2.90
151 154 6.619801 ATCCTAAATGACGGATGTAAAAGC 57.380 37.500 0.00 0.00 38.56 3.51
164 167 6.016024 GGCTTTCATATGTGCATCCTAAATGA 60.016 38.462 15.62 0.00 0.00 2.57
189 192 2.971598 AAGGAGGTGCATGTCCCCG 61.972 63.158 12.51 0.00 32.70 5.73
194 197 1.065854 GCTCTACAAGGAGGTGCATGT 60.066 52.381 0.00 0.00 34.21 3.21
195 198 1.661341 GCTCTACAAGGAGGTGCATG 58.339 55.000 0.00 0.00 34.21 4.06
196 199 0.543749 GGCTCTACAAGGAGGTGCAT 59.456 55.000 0.00 0.00 34.21 3.96
211 214 1.201429 TCCCCTCCACTTTCAGGCTC 61.201 60.000 0.00 0.00 0.00 4.70
221 224 4.222847 GTCGGCGATCCCCTCCAC 62.223 72.222 14.79 0.00 0.00 4.02
241 244 2.426431 TAGGTGGTTGAAGAGGGGAA 57.574 50.000 0.00 0.00 0.00 3.97
243 246 2.196595 TGATAGGTGGTTGAAGAGGGG 58.803 52.381 0.00 0.00 0.00 4.79
253 256 4.021102 CACCAGAAGTTTGATAGGTGGT 57.979 45.455 0.00 0.00 42.04 4.16
268 271 5.013079 AGACTCAATATGTTTGACCACCAGA 59.987 40.000 0.00 0.00 0.00 3.86
277 280 6.038356 GGAAATGGCAGACTCAATATGTTTG 58.962 40.000 0.00 0.00 0.00 2.93
278 281 5.716228 TGGAAATGGCAGACTCAATATGTTT 59.284 36.000 0.00 0.00 0.00 2.83
279 282 5.263599 TGGAAATGGCAGACTCAATATGTT 58.736 37.500 0.00 0.00 0.00 2.71
285 288 4.588106 TGATTTTGGAAATGGCAGACTCAA 59.412 37.500 0.00 0.00 0.00 3.02
290 293 4.952071 TGTTGATTTTGGAAATGGCAGA 57.048 36.364 0.00 0.00 0.00 4.26
300 303 4.269603 TGCGTGTTTCATTGTTGATTTTGG 59.730 37.500 0.00 0.00 0.00 3.28
310 313 4.665212 AGATTGCTATGCGTGTTTCATTG 58.335 39.130 0.00 0.00 0.00 2.82
311 314 4.494690 CGAGATTGCTATGCGTGTTTCATT 60.495 41.667 0.00 0.00 0.00 2.57
313 316 2.348362 CGAGATTGCTATGCGTGTTTCA 59.652 45.455 0.00 0.00 0.00 2.69
334 337 3.666902 CGGTGTCATGAAATTCGTGAACC 60.667 47.826 23.97 23.97 43.30 3.62
348 351 0.472471 ACCTTGGTTCACGGTGTCAT 59.528 50.000 8.17 0.00 34.66 3.06
394 397 4.410400 GTCCTTGGCGAGGGGGTG 62.410 72.222 20.82 0.00 46.31 4.61
395 398 4.974438 TGTCCTTGGCGAGGGGGT 62.974 66.667 20.82 0.00 46.31 4.95
396 399 3.646715 TTGTCCTTGGCGAGGGGG 61.647 66.667 20.82 0.00 46.31 5.40
397 400 2.359975 GTTGTCCTTGGCGAGGGG 60.360 66.667 20.82 0.00 46.31 4.79
398 401 0.251916 TATGTTGTCCTTGGCGAGGG 59.748 55.000 20.82 2.29 46.31 4.30
400 403 1.009829 GCTATGTTGTCCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
401 404 0.739462 CGCTATGTTGTCCTTGGCGA 60.739 55.000 0.00 0.00 46.59 5.54
402 405 1.705337 CCGCTATGTTGTCCTTGGCG 61.705 60.000 0.00 0.00 44.37 5.69
403 406 1.993369 GCCGCTATGTTGTCCTTGGC 61.993 60.000 0.00 0.00 0.00 4.52
404 407 1.376609 GGCCGCTATGTTGTCCTTGG 61.377 60.000 0.00 0.00 0.00 3.61
405 408 0.392998 AGGCCGCTATGTTGTCCTTG 60.393 55.000 0.00 0.00 0.00 3.61
406 409 0.328258 AAGGCCGCTATGTTGTCCTT 59.672 50.000 0.00 0.00 0.00 3.36
407 410 0.392998 CAAGGCCGCTATGTTGTCCT 60.393 55.000 0.00 0.00 0.00 3.85
408 411 1.993369 GCAAGGCCGCTATGTTGTCC 61.993 60.000 0.00 0.00 0.00 4.02
409 412 1.429423 GCAAGGCCGCTATGTTGTC 59.571 57.895 0.00 0.00 0.00 3.18
410 413 2.046285 GGCAAGGCCGCTATGTTGT 61.046 57.895 0.00 0.00 39.62 3.32
411 414 2.800736 GGCAAGGCCGCTATGTTG 59.199 61.111 0.00 0.00 39.62 3.33
431 434 4.812476 TGTGCGGGCTCGAATCGG 62.812 66.667 12.03 0.00 39.00 4.18
432 435 2.813474 TTGTGCGGGCTCGAATCG 60.813 61.111 12.03 0.00 39.00 3.34
433 436 1.696832 GAGTTGTGCGGGCTCGAATC 61.697 60.000 12.03 0.00 39.00 2.52
434 437 1.741770 GAGTTGTGCGGGCTCGAAT 60.742 57.895 12.03 0.00 39.00 3.34
435 438 2.357034 GAGTTGTGCGGGCTCGAA 60.357 61.111 12.03 0.00 39.00 3.71
436 439 4.373116 GGAGTTGTGCGGGCTCGA 62.373 66.667 12.03 0.00 39.00 4.04
437 440 4.680237 TGGAGTTGTGCGGGCTCG 62.680 66.667 0.00 0.00 39.81 5.03
438 441 2.743928 CTGGAGTTGTGCGGGCTC 60.744 66.667 0.00 0.00 0.00 4.70
439 442 3.560251 ACTGGAGTTGTGCGGGCT 61.560 61.111 0.00 0.00 0.00 5.19
440 443 3.357079 CACTGGAGTTGTGCGGGC 61.357 66.667 0.00 0.00 0.00 6.13
445 448 1.300971 CGATGGGCACTGGAGTTGTG 61.301 60.000 0.00 0.00 38.36 3.33
446 449 1.003355 CGATGGGCACTGGAGTTGT 60.003 57.895 0.00 0.00 0.00 3.32
447 450 2.401766 GCGATGGGCACTGGAGTTG 61.402 63.158 0.00 0.00 42.87 3.16
448 451 2.045926 GCGATGGGCACTGGAGTT 60.046 61.111 0.00 0.00 42.87 3.01
507 892 1.365633 CGCATCTACCTGGCCTCTC 59.634 63.158 3.32 0.00 0.00 3.20
515 900 2.687200 TGGGTGGCGCATCTACCT 60.687 61.111 10.83 0.00 44.91 3.08
529 914 1.815003 GAAAGGAGCATGTTCTGTGGG 59.185 52.381 9.57 0.00 0.00 4.61
555 941 2.701780 CGTCGCAGCTGGAGGTAGT 61.702 63.158 17.12 0.00 0.00 2.73
577 963 0.737715 GTCGGTGAGTCATGGCAGAC 60.738 60.000 0.00 8.46 38.81 3.51
648 1034 1.133761 TCGAGTCTCCCGAGATCCAAT 60.134 52.381 0.00 0.00 39.97 3.16
681 1067 4.094887 ACGCAAACTGGATTTATAGCTGTG 59.905 41.667 0.00 0.00 0.00 3.66
684 1070 3.627577 CCACGCAAACTGGATTTATAGCT 59.372 43.478 0.00 0.00 0.00 3.32
685 1071 3.625764 TCCACGCAAACTGGATTTATAGC 59.374 43.478 0.00 0.00 32.52 2.97
686 1072 5.811399 TTCCACGCAAACTGGATTTATAG 57.189 39.130 0.00 0.00 37.65 1.31
687 1073 7.276658 TCTATTCCACGCAAACTGGATTTATA 58.723 34.615 0.00 0.00 37.65 0.98
688 1074 6.119536 TCTATTCCACGCAAACTGGATTTAT 58.880 36.000 0.00 0.00 37.65 1.40
689 1075 5.492895 TCTATTCCACGCAAACTGGATTTA 58.507 37.500 0.00 0.00 37.65 1.40
690 1076 4.331968 TCTATTCCACGCAAACTGGATTT 58.668 39.130 0.00 0.00 37.65 2.17
704 1102 3.745799 TGTTCGCTGGTTTTCTATTCCA 58.254 40.909 0.00 0.00 0.00 3.53
705 1103 4.759516 TTGTTCGCTGGTTTTCTATTCC 57.240 40.909 0.00 0.00 0.00 3.01
706 1104 5.060940 GCAATTGTTCGCTGGTTTTCTATTC 59.939 40.000 7.40 0.00 0.00 1.75
715 1113 2.593346 TTTTGCAATTGTTCGCTGGT 57.407 40.000 7.40 0.00 0.00 4.00
717 1115 2.348779 GGCTTTTTGCAATTGTTCGCTG 60.349 45.455 7.40 0.00 45.15 5.18
720 1118 2.123342 TCGGCTTTTTGCAATTGTTCG 58.877 42.857 7.40 2.83 45.15 3.95
723 1121 2.100584 TGACTCGGCTTTTTGCAATTGT 59.899 40.909 7.40 0.00 45.15 2.71
738 1136 1.202973 GCACGATGACCGATGACTCG 61.203 60.000 0.00 0.00 44.62 4.18
739 1137 1.202973 CGCACGATGACCGATGACTC 61.203 60.000 0.00 0.00 41.76 3.36
740 1138 1.226688 CGCACGATGACCGATGACT 60.227 57.895 0.00 0.00 41.76 3.41
741 1139 2.860628 GCGCACGATGACCGATGAC 61.861 63.158 0.30 0.00 41.76 3.06
742 1140 2.582226 GCGCACGATGACCGATGA 60.582 61.111 0.30 0.00 41.76 2.92
754 1152 2.202349 GCACGAATCTTGGCGCAC 60.202 61.111 10.83 0.00 0.00 5.34
757 1155 1.764851 TTTTTGCACGAATCTTGGCG 58.235 45.000 0.00 0.00 0.00 5.69
773 1171 6.445357 ACAGCCGTCGGATTTATTTATTTT 57.555 33.333 17.49 0.00 0.00 1.82
902 1303 4.899239 GGGCGGAGGAGATGTGCG 62.899 72.222 0.00 0.00 0.00 5.34
961 1363 1.302511 CGGGTGGTGGGAGTTCTTG 60.303 63.158 0.00 0.00 0.00 3.02
1335 1737 2.045242 TCGTCGAGGGTGGAGAGG 60.045 66.667 5.12 0.00 0.00 3.69
1410 1812 0.809241 CAGAGAGTCAATGGCGAGGC 60.809 60.000 0.00 0.00 0.00 4.70
1446 1848 2.539953 CGCTAAGAGCCGTCAGAAGTAG 60.540 54.545 0.00 0.00 38.18 2.57
1449 1851 0.452184 TCGCTAAGAGCCGTCAGAAG 59.548 55.000 0.00 0.00 38.18 2.85
1483 1890 6.322931 AGATGGTTCTTGGGGAAAATTAAGT 58.677 36.000 0.00 0.00 35.51 2.24
1493 1901 5.770162 GGTTAATCATAGATGGTTCTTGGGG 59.230 44.000 0.00 0.00 32.49 4.96
1641 2057 1.465354 CCGGTGACTAGTTTCGTCTCG 60.465 57.143 0.00 0.00 32.70 4.04
1689 2105 1.115930 AGAACTGCACGACCTCCACT 61.116 55.000 0.00 0.00 0.00 4.00
1739 2155 3.251004 GCAACCTTCTTCGTTGAACAGAT 59.749 43.478 4.93 0.00 42.63 2.90
1875 2291 2.040813 TCCTTCCAAAGCAGCAATCTCT 59.959 45.455 0.00 0.00 0.00 3.10
1884 2300 2.951642 CTCAACAACTCCTTCCAAAGCA 59.048 45.455 0.00 0.00 0.00 3.91
2042 2462 7.093992 ACAACATAATTTCCCCATTTTACACG 58.906 34.615 0.00 0.00 0.00 4.49
2167 3409 2.408271 TGTCATGATCACAAGGGCTC 57.592 50.000 0.00 0.00 0.00 4.70
2188 3430 8.295288 GCCCAAGAAGATTAATATGTCATTGAG 58.705 37.037 0.00 0.00 0.00 3.02
2215 3457 3.554934 TCAAAGTGCTGTTCTGATTGGT 58.445 40.909 0.00 0.00 0.00 3.67
2228 3478 4.237724 GCTCCCAAGTTTATTCAAAGTGC 58.762 43.478 0.00 0.00 0.00 4.40
2443 7035 1.604593 CAGTGTTGGCCCTTCCTGG 60.605 63.158 0.00 0.00 35.26 4.45
2447 7039 1.609072 GACTTTCAGTGTTGGCCCTTC 59.391 52.381 0.00 0.00 0.00 3.46
2488 7082 4.742438 TGTAATTCGGCTGTTCTTGTTC 57.258 40.909 0.00 0.00 0.00 3.18
2623 7223 5.774498 ACTCCAATTTTCTGACCTGAAAC 57.226 39.130 2.25 0.00 35.91 2.78
2690 7290 7.042389 GCATCTTTATTAGCTTCAGTCTGTACC 60.042 40.741 0.00 0.00 0.00 3.34
2736 7336 3.117131 AGGAGAGGCCTCAAAAGGAAAAA 60.117 43.478 33.90 0.00 46.97 1.94
2938 7635 1.895798 AGGCTGAAGAGATTCGACACA 59.104 47.619 0.00 0.00 0.00 3.72
2947 7644 2.179427 TCCGATTTGAGGCTGAAGAGA 58.821 47.619 0.00 0.00 0.00 3.10
2954 7651 3.274288 GAAGTTCATCCGATTTGAGGCT 58.726 45.455 0.00 0.00 0.00 4.58
3160 7861 2.854777 CACACCTCGAATCGACAGAATC 59.145 50.000 0.00 0.00 0.00 2.52
3226 7927 1.067213 GCTCCTGAGAAGAAGCGACTT 60.067 52.381 0.00 0.00 0.00 3.01
3311 8014 3.009473 CCCCAATCAAGGTCTTCAGAAGA 59.991 47.826 8.95 8.95 34.51 2.87
3312 8015 3.009473 TCCCCAATCAAGGTCTTCAGAAG 59.991 47.826 3.45 3.45 0.00 2.85
3393 8099 3.547868 GTGTAGTACATCTGTGACGCATG 59.452 47.826 6.21 0.00 0.00 4.06
3404 8110 7.201410 CGTGTGAAACCTTATGTGTAGTACATC 60.201 40.741 6.21 1.42 42.60 3.06
3420 8126 1.666700 TGTAAGTGCACGTGTGAAACC 59.333 47.619 18.38 0.00 34.36 3.27
3422 8128 2.353269 CCTTGTAAGTGCACGTGTGAAA 59.647 45.455 18.38 4.30 0.00 2.69
3430 8136 4.911514 TTCCTTTTCCTTGTAAGTGCAC 57.088 40.909 9.40 9.40 0.00 4.57
3440 8146 7.219322 CCATGTTTGAAGAATTCCTTTTCCTT 58.781 34.615 0.65 0.00 46.93 3.36
3452 8158 3.745799 TCGTAAGCCCATGTTTGAAGAA 58.254 40.909 0.00 0.00 37.18 2.52
3493 8199 3.615110 CGGAAATCCTACATCTCATCCGG 60.615 52.174 0.00 0.00 43.52 5.14
3494 8200 3.579709 CGGAAATCCTACATCTCATCCG 58.420 50.000 0.00 0.00 42.01 4.18
3495 8201 3.866449 GCCGGAAATCCTACATCTCATCC 60.866 52.174 5.05 0.00 0.00 3.51
3496 8202 3.244215 TGCCGGAAATCCTACATCTCATC 60.244 47.826 5.05 0.00 0.00 2.92
3497 8203 2.705658 TGCCGGAAATCCTACATCTCAT 59.294 45.455 5.05 0.00 0.00 2.90
3498 8204 2.115427 TGCCGGAAATCCTACATCTCA 58.885 47.619 5.05 0.00 0.00 3.27
3499 8205 2.910688 TGCCGGAAATCCTACATCTC 57.089 50.000 5.05 0.00 0.00 2.75
3500 8206 2.158755 CCTTGCCGGAAATCCTACATCT 60.159 50.000 5.05 0.00 33.16 2.90
3501 8207 2.222027 CCTTGCCGGAAATCCTACATC 58.778 52.381 5.05 0.00 33.16 3.06
3502 8208 1.133792 CCCTTGCCGGAAATCCTACAT 60.134 52.381 5.05 0.00 33.16 2.29
3503 8209 0.254747 CCCTTGCCGGAAATCCTACA 59.745 55.000 5.05 0.00 33.16 2.74
3504 8210 0.465642 CCCCTTGCCGGAAATCCTAC 60.466 60.000 5.05 0.00 33.16 3.18
3505 8211 1.919771 CCCCTTGCCGGAAATCCTA 59.080 57.895 5.05 0.00 33.16 2.94
3506 8212 2.683475 CCCCTTGCCGGAAATCCT 59.317 61.111 5.05 0.00 33.16 3.24
3507 8213 3.147595 GCCCCTTGCCGGAAATCC 61.148 66.667 5.05 0.00 33.16 3.01
3508 8214 3.518068 CGCCCCTTGCCGGAAATC 61.518 66.667 5.05 0.00 36.24 2.17
3509 8215 1.990160 TATCGCCCCTTGCCGGAAAT 61.990 55.000 5.05 0.00 36.24 2.17
3510 8216 2.199613 TTATCGCCCCTTGCCGGAAA 62.200 55.000 5.05 0.00 36.24 3.13
3511 8217 2.199613 TTTATCGCCCCTTGCCGGAA 62.200 55.000 5.05 0.00 36.24 4.30
3512 8218 2.199613 TTTTATCGCCCCTTGCCGGA 62.200 55.000 5.05 0.00 36.24 5.14
3513 8219 1.106944 ATTTTATCGCCCCTTGCCGG 61.107 55.000 0.00 0.00 36.24 6.13
3514 8220 0.030638 CATTTTATCGCCCCTTGCCG 59.969 55.000 0.00 0.00 36.24 5.69
3515 8221 1.067060 GTCATTTTATCGCCCCTTGCC 59.933 52.381 0.00 0.00 36.24 4.52
3516 8222 1.748493 TGTCATTTTATCGCCCCTTGC 59.252 47.619 0.00 0.00 0.00 4.01
3517 8223 3.016736 AGTGTCATTTTATCGCCCCTTG 58.983 45.455 0.00 0.00 0.00 3.61
3518 8224 3.366052 AGTGTCATTTTATCGCCCCTT 57.634 42.857 0.00 0.00 0.00 3.95
3519 8225 3.366052 AAGTGTCATTTTATCGCCCCT 57.634 42.857 0.00 0.00 0.00 4.79
3520 8226 5.570234 TTAAAGTGTCATTTTATCGCCCC 57.430 39.130 1.79 0.00 0.00 5.80
3521 8227 7.544217 ACAAATTAAAGTGTCATTTTATCGCCC 59.456 33.333 1.79 0.00 0.00 6.13
3522 8228 8.372521 CACAAATTAAAGTGTCATTTTATCGCC 58.627 33.333 1.79 0.00 0.00 5.54
3523 8229 8.372521 CCACAAATTAAAGTGTCATTTTATCGC 58.627 33.333 1.79 0.00 33.99 4.58
3524 8230 8.859156 CCCACAAATTAAAGTGTCATTTTATCG 58.141 33.333 1.79 0.00 33.99 2.92
3525 8231 9.921637 TCCCACAAATTAAAGTGTCATTTTATC 57.078 29.630 1.79 0.00 33.99 1.75
3528 8234 9.054922 CAATCCCACAAATTAAAGTGTCATTTT 57.945 29.630 0.00 0.00 33.99 1.82
3529 8235 8.428063 TCAATCCCACAAATTAAAGTGTCATTT 58.572 29.630 0.00 0.00 33.99 2.32
3530 8236 7.961351 TCAATCCCACAAATTAAAGTGTCATT 58.039 30.769 0.00 0.00 33.99 2.57
3531 8237 7.537596 TCAATCCCACAAATTAAAGTGTCAT 57.462 32.000 0.00 0.00 33.99 3.06
3532 8238 6.968263 TCAATCCCACAAATTAAAGTGTCA 57.032 33.333 0.00 0.00 33.99 3.58
3533 8239 6.868339 CCTTCAATCCCACAAATTAAAGTGTC 59.132 38.462 0.00 0.00 33.99 3.67
3534 8240 6.326323 ACCTTCAATCCCACAAATTAAAGTGT 59.674 34.615 0.00 0.00 33.99 3.55
3535 8241 6.758254 ACCTTCAATCCCACAAATTAAAGTG 58.242 36.000 0.00 0.00 35.56 3.16
3536 8242 6.994421 ACCTTCAATCCCACAAATTAAAGT 57.006 33.333 0.00 0.00 0.00 2.66
3537 8243 7.216494 ACAACCTTCAATCCCACAAATTAAAG 58.784 34.615 0.00 0.00 0.00 1.85
3538 8244 7.130681 ACAACCTTCAATCCCACAAATTAAA 57.869 32.000 0.00 0.00 0.00 1.52
3539 8245 6.739331 ACAACCTTCAATCCCACAAATTAA 57.261 33.333 0.00 0.00 0.00 1.40
3540 8246 6.325028 TCAACAACCTTCAATCCCACAAATTA 59.675 34.615 0.00 0.00 0.00 1.40
3541 8247 5.130145 TCAACAACCTTCAATCCCACAAATT 59.870 36.000 0.00 0.00 0.00 1.82
3542 8248 4.653341 TCAACAACCTTCAATCCCACAAAT 59.347 37.500 0.00 0.00 0.00 2.32
3543 8249 4.026744 TCAACAACCTTCAATCCCACAAA 58.973 39.130 0.00 0.00 0.00 2.83
3544 8250 3.636679 TCAACAACCTTCAATCCCACAA 58.363 40.909 0.00 0.00 0.00 3.33
3545 8251 3.304911 TCAACAACCTTCAATCCCACA 57.695 42.857 0.00 0.00 0.00 4.17
3546 8252 4.664150 TTTCAACAACCTTCAATCCCAC 57.336 40.909 0.00 0.00 0.00 4.61
3547 8253 7.552050 AATATTTCAACAACCTTCAATCCCA 57.448 32.000 0.00 0.00 0.00 4.37
3548 8254 8.314021 AGAAATATTTCAACAACCTTCAATCCC 58.686 33.333 26.02 0.00 39.61 3.85
3549 8255 9.143631 CAGAAATATTTCAACAACCTTCAATCC 57.856 33.333 26.02 0.00 39.61 3.01
3550 8256 9.912634 TCAGAAATATTTCAACAACCTTCAATC 57.087 29.630 26.02 0.00 39.61 2.67
3552 8258 9.695526 CATCAGAAATATTTCAACAACCTTCAA 57.304 29.630 26.02 2.46 39.61 2.69
3553 8259 9.076781 TCATCAGAAATATTTCAACAACCTTCA 57.923 29.630 26.02 0.00 39.61 3.02
3554 8260 9.912634 TTCATCAGAAATATTTCAACAACCTTC 57.087 29.630 26.02 0.23 39.61 3.46
3555 8261 9.918630 CTTCATCAGAAATATTTCAACAACCTT 57.081 29.630 26.02 4.08 39.61 3.50
3556 8262 9.300681 TCTTCATCAGAAATATTTCAACAACCT 57.699 29.630 26.02 4.75 39.61 3.50
3557 8263 9.912634 TTCTTCATCAGAAATATTTCAACAACC 57.087 29.630 26.02 2.31 38.68 3.77
3586 8292 9.330063 CACCAATCACATAATCAACATAGTACT 57.670 33.333 0.00 0.00 0.00 2.73
3587 8293 9.325198 TCACCAATCACATAATCAACATAGTAC 57.675 33.333 0.00 0.00 0.00 2.73
3589 8295 8.843262 CATCACCAATCACATAATCAACATAGT 58.157 33.333 0.00 0.00 0.00 2.12
3590 8296 8.843262 ACATCACCAATCACATAATCAACATAG 58.157 33.333 0.00 0.00 0.00 2.23
3591 8297 8.750515 ACATCACCAATCACATAATCAACATA 57.249 30.769 0.00 0.00 0.00 2.29
3592 8298 7.649533 ACATCACCAATCACATAATCAACAT 57.350 32.000 0.00 0.00 0.00 2.71
3593 8299 7.465353 AACATCACCAATCACATAATCAACA 57.535 32.000 0.00 0.00 0.00 3.33
3594 8300 9.289303 GTTAACATCACCAATCACATAATCAAC 57.711 33.333 0.00 0.00 0.00 3.18
3595 8301 9.018582 TGTTAACATCACCAATCACATAATCAA 57.981 29.630 3.59 0.00 0.00 2.57
3596 8302 8.572855 TGTTAACATCACCAATCACATAATCA 57.427 30.769 3.59 0.00 0.00 2.57
3597 8303 9.853555 TTTGTTAACATCACCAATCACATAATC 57.146 29.630 9.56 0.00 0.00 1.75
3598 8304 9.859427 CTTTGTTAACATCACCAATCACATAAT 57.141 29.630 9.56 0.00 0.00 1.28
3599 8305 7.812191 GCTTTGTTAACATCACCAATCACATAA 59.188 33.333 9.56 0.00 0.00 1.90
3600 8306 7.040132 TGCTTTGTTAACATCACCAATCACATA 60.040 33.333 9.56 0.00 0.00 2.29
3601 8307 6.158598 GCTTTGTTAACATCACCAATCACAT 58.841 36.000 9.56 0.00 0.00 3.21
3602 8308 5.068329 TGCTTTGTTAACATCACCAATCACA 59.932 36.000 9.56 0.00 0.00 3.58
3603 8309 5.527951 TGCTTTGTTAACATCACCAATCAC 58.472 37.500 9.56 0.00 0.00 3.06
3604 8310 5.781210 TGCTTTGTTAACATCACCAATCA 57.219 34.783 9.56 0.00 0.00 2.57
3605 8311 5.062558 GCATGCTTTGTTAACATCACCAATC 59.937 40.000 11.37 0.00 0.00 2.67
3606 8312 4.931002 GCATGCTTTGTTAACATCACCAAT 59.069 37.500 11.37 0.00 0.00 3.16
3607 8313 4.202192 TGCATGCTTTGTTAACATCACCAA 60.202 37.500 20.33 0.00 0.00 3.67
3608 8314 3.320256 TGCATGCTTTGTTAACATCACCA 59.680 39.130 20.33 5.30 0.00 4.17
3609 8315 3.911868 TGCATGCTTTGTTAACATCACC 58.088 40.909 20.33 0.00 0.00 4.02
3610 8316 5.634439 TCATTGCATGCTTTGTTAACATCAC 59.366 36.000 20.33 2.37 0.00 3.06
3611 8317 5.780984 TCATTGCATGCTTTGTTAACATCA 58.219 33.333 20.33 8.46 0.00 3.07
3612 8318 6.709145 TTCATTGCATGCTTTGTTAACATC 57.291 33.333 20.33 2.83 0.00 3.06
3613 8319 7.675962 ATTTCATTGCATGCTTTGTTAACAT 57.324 28.000 20.33 0.00 0.00 2.71
3614 8320 8.657729 CATATTTCATTGCATGCTTTGTTAACA 58.342 29.630 20.33 3.59 0.00 2.41
3615 8321 8.871862 TCATATTTCATTGCATGCTTTGTTAAC 58.128 29.630 20.33 0.00 0.00 2.01
3616 8322 8.999220 TCATATTTCATTGCATGCTTTGTTAA 57.001 26.923 20.33 13.86 0.00 2.01
3617 8323 8.999220 TTCATATTTCATTGCATGCTTTGTTA 57.001 26.923 20.33 8.94 0.00 2.41
3618 8324 7.908827 TTCATATTTCATTGCATGCTTTGTT 57.091 28.000 20.33 8.39 0.00 2.83
3619 8325 9.602568 TTATTCATATTTCATTGCATGCTTTGT 57.397 25.926 20.33 3.62 0.00 2.83
3623 8329 9.582431 GCTATTATTCATATTTCATTGCATGCT 57.418 29.630 20.33 0.00 0.00 3.79
3624 8330 9.582431 AGCTATTATTCATATTTCATTGCATGC 57.418 29.630 11.82 11.82 0.00 4.06
3627 8333 9.299465 TCCAGCTATTATTCATATTTCATTGCA 57.701 29.630 0.00 0.00 0.00 4.08
3639 8345 9.778741 CCTTAGTTAACATCCAGCTATTATTCA 57.221 33.333 8.61 0.00 0.00 2.57
3640 8346 9.220767 CCCTTAGTTAACATCCAGCTATTATTC 57.779 37.037 8.61 0.00 0.00 1.75
3641 8347 8.724310 ACCCTTAGTTAACATCCAGCTATTATT 58.276 33.333 8.61 0.00 0.00 1.40
3642 8348 8.157476 CACCCTTAGTTAACATCCAGCTATTAT 58.843 37.037 8.61 0.00 0.00 1.28
3643 8349 7.126726 ACACCCTTAGTTAACATCCAGCTATTA 59.873 37.037 8.61 0.00 0.00 0.98
3644 8350 6.069615 ACACCCTTAGTTAACATCCAGCTATT 60.070 38.462 8.61 0.00 0.00 1.73
3645 8351 5.428783 ACACCCTTAGTTAACATCCAGCTAT 59.571 40.000 8.61 0.00 0.00 2.97
3646 8352 4.781087 ACACCCTTAGTTAACATCCAGCTA 59.219 41.667 8.61 0.00 0.00 3.32
3647 8353 3.587506 ACACCCTTAGTTAACATCCAGCT 59.412 43.478 8.61 0.00 0.00 4.24
3648 8354 3.951663 ACACCCTTAGTTAACATCCAGC 58.048 45.455 8.61 0.00 0.00 4.85
3649 8355 5.768164 ACAAACACCCTTAGTTAACATCCAG 59.232 40.000 8.61 0.00 0.00 3.86
3650 8356 5.533154 CACAAACACCCTTAGTTAACATCCA 59.467 40.000 8.61 0.00 0.00 3.41
3651 8357 5.533528 ACACAAACACCCTTAGTTAACATCC 59.466 40.000 8.61 0.00 0.00 3.51
3652 8358 6.038936 ACACACAAACACCCTTAGTTAACATC 59.961 38.462 8.61 0.00 0.00 3.06
3653 8359 5.889289 ACACACAAACACCCTTAGTTAACAT 59.111 36.000 8.61 0.00 0.00 2.71
3654 8360 5.124138 CACACACAAACACCCTTAGTTAACA 59.876 40.000 8.61 0.00 0.00 2.41
3655 8361 5.124297 ACACACACAAACACCCTTAGTTAAC 59.876 40.000 0.00 0.00 0.00 2.01
3656 8362 5.254901 ACACACACAAACACCCTTAGTTAA 58.745 37.500 0.00 0.00 0.00 2.01
3657 8363 4.846040 ACACACACAAACACCCTTAGTTA 58.154 39.130 0.00 0.00 0.00 2.24
3658 8364 3.692690 ACACACACAAACACCCTTAGTT 58.307 40.909 0.00 0.00 0.00 2.24
3659 8365 3.359695 ACACACACAAACACCCTTAGT 57.640 42.857 0.00 0.00 0.00 2.24
3660 8366 6.228258 AGTATACACACACAAACACCCTTAG 58.772 40.000 5.50 0.00 0.00 2.18
3661 8367 6.177310 AGTATACACACACAAACACCCTTA 57.823 37.500 5.50 0.00 0.00 2.69
3662 8368 5.043737 AGTATACACACACAAACACCCTT 57.956 39.130 5.50 0.00 0.00 3.95
3663 8369 4.638304 GAGTATACACACACAAACACCCT 58.362 43.478 5.50 0.00 0.00 4.34
3664 8370 3.430895 CGAGTATACACACACAAACACCC 59.569 47.826 5.50 0.00 0.00 4.61
3665 8371 3.430895 CCGAGTATACACACACAAACACC 59.569 47.826 5.50 0.00 0.00 4.16
3666 8372 3.430895 CCCGAGTATACACACACAAACAC 59.569 47.826 5.50 0.00 0.00 3.32
3667 8373 3.555377 CCCCGAGTATACACACACAAACA 60.555 47.826 5.50 0.00 0.00 2.83
3668 8374 2.997986 CCCCGAGTATACACACACAAAC 59.002 50.000 5.50 0.00 0.00 2.93
3669 8375 2.633967 ACCCCGAGTATACACACACAAA 59.366 45.455 5.50 0.00 0.00 2.83
3670 8376 2.250031 ACCCCGAGTATACACACACAA 58.750 47.619 5.50 0.00 0.00 3.33
3671 8377 1.927487 ACCCCGAGTATACACACACA 58.073 50.000 5.50 0.00 0.00 3.72
3672 8378 3.323751 AAACCCCGAGTATACACACAC 57.676 47.619 5.50 0.00 0.00 3.82
3673 8379 3.579586 AGAAAACCCCGAGTATACACACA 59.420 43.478 5.50 0.00 0.00 3.72
3674 8380 3.930848 CAGAAAACCCCGAGTATACACAC 59.069 47.826 5.50 0.00 0.00 3.82
3675 8381 3.618019 GCAGAAAACCCCGAGTATACACA 60.618 47.826 5.50 0.00 0.00 3.72
3676 8382 2.934553 GCAGAAAACCCCGAGTATACAC 59.065 50.000 5.50 0.00 0.00 2.90
3677 8383 2.093341 GGCAGAAAACCCCGAGTATACA 60.093 50.000 5.50 0.00 0.00 2.29
3678 8384 2.558378 GGCAGAAAACCCCGAGTATAC 58.442 52.381 0.00 0.00 0.00 1.47
3679 8385 1.487558 GGGCAGAAAACCCCGAGTATA 59.512 52.381 0.00 0.00 42.01 1.47
3680 8386 0.255033 GGGCAGAAAACCCCGAGTAT 59.745 55.000 0.00 0.00 42.01 2.12
3681 8387 1.681076 GGGCAGAAAACCCCGAGTA 59.319 57.895 0.00 0.00 42.01 2.59
3682 8388 2.434774 GGGCAGAAAACCCCGAGT 59.565 61.111 0.00 0.00 42.01 4.18
3688 8394 4.401519 GGATAAAAGTAGGGGCAGAAAACC 59.598 45.833 0.00 0.00 0.00 3.27
3689 8395 5.262009 AGGATAAAAGTAGGGGCAGAAAAC 58.738 41.667 0.00 0.00 0.00 2.43
3690 8396 5.530176 AGGATAAAAGTAGGGGCAGAAAA 57.470 39.130 0.00 0.00 0.00 2.29
3691 8397 6.841781 ATAGGATAAAAGTAGGGGCAGAAA 57.158 37.500 0.00 0.00 0.00 2.52
3692 8398 6.159751 ACAATAGGATAAAAGTAGGGGCAGAA 59.840 38.462 0.00 0.00 0.00 3.02
3693 8399 5.670361 ACAATAGGATAAAAGTAGGGGCAGA 59.330 40.000 0.00 0.00 0.00 4.26
3694 8400 5.941788 ACAATAGGATAAAAGTAGGGGCAG 58.058 41.667 0.00 0.00 0.00 4.85
3695 8401 5.987019 ACAATAGGATAAAAGTAGGGGCA 57.013 39.130 0.00 0.00 0.00 5.36
3696 8402 6.884836 CCATACAATAGGATAAAAGTAGGGGC 59.115 42.308 0.00 0.00 31.77 5.80
3697 8403 6.884836 GCCATACAATAGGATAAAAGTAGGGG 59.115 42.308 0.00 0.00 34.87 4.79
3698 8404 6.884836 GGCCATACAATAGGATAAAAGTAGGG 59.115 42.308 0.00 0.00 36.71 3.53
3699 8405 7.458397 TGGCCATACAATAGGATAAAAGTAGG 58.542 38.462 0.00 0.00 0.00 3.18
3700 8406 8.375506 TCTGGCCATACAATAGGATAAAAGTAG 58.624 37.037 5.51 0.00 0.00 2.57
3701 8407 8.270137 TCTGGCCATACAATAGGATAAAAGTA 57.730 34.615 5.51 0.00 0.00 2.24
3702 8408 7.149202 TCTGGCCATACAATAGGATAAAAGT 57.851 36.000 5.51 0.00 0.00 2.66
3703 8409 9.167311 GTATCTGGCCATACAATAGGATAAAAG 57.833 37.037 5.51 0.00 30.61 2.27
3704 8410 8.890472 AGTATCTGGCCATACAATAGGATAAAA 58.110 33.333 16.91 0.00 32.39 1.52
3709 8415 6.319715 TGTAGTATCTGGCCATACAATAGGA 58.680 40.000 16.91 4.54 32.39 2.94
3713 8419 6.730977 AGGTATGTAGTATCTGGCCATACAAT 59.269 38.462 17.69 10.78 39.57 2.71
3907 10262 4.999311 CAGAACCACTTCATCAACAGATGA 59.001 41.667 4.17 4.17 44.71 2.92
3923 10278 4.402155 ACAGCAAAAGATTGTTCAGAACCA 59.598 37.500 10.93 0.00 38.85 3.67
4019 10374 7.502226 TGCAAACCCCAATATATTAAGAGTCAG 59.498 37.037 0.00 0.00 0.00 3.51
4069 10424 6.757897 ACAGACATGAGAAAAACAAGACAA 57.242 33.333 0.00 0.00 0.00 3.18
4082 10438 7.144661 CAGCTATACTTCCTAACAGACATGAG 58.855 42.308 0.00 0.00 0.00 2.90
4234 15785 9.890629 TGAATATATACTCTTGTTTCTGCACTT 57.109 29.630 0.00 0.00 0.00 3.16
4305 15865 2.606725 GCAGAAATCCAGATCACAGACG 59.393 50.000 0.00 0.00 0.00 4.18
4585 16161 9.290483 CAAAAAGAAAAGTTACAGTTCCTTCTC 57.710 33.333 0.00 0.00 0.00 2.87
4606 16182 2.074729 TTCCTTCTTCCCCGCAAAAA 57.925 45.000 0.00 0.00 0.00 1.94
4709 16301 4.637534 TCTCTTGGCTAAACATCTGCAATC 59.362 41.667 0.00 0.00 0.00 2.67
4734 16326 5.106712 TGTCTTAACTCCGAATGTTGCATTC 60.107 40.000 10.78 10.78 0.00 2.67
4740 16332 4.323417 TGCATGTCTTAACTCCGAATGTT 58.677 39.130 0.00 0.00 0.00 2.71
4751 16343 8.969260 ATCTGATATTCAGTTGCATGTCTTAA 57.031 30.769 4.56 0.00 44.58 1.85
4752 16344 9.702494 CTATCTGATATTCAGTTGCATGTCTTA 57.298 33.333 4.56 0.00 44.58 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.