Multiple sequence alignment - TraesCS6D01G059700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G059700 chr6D 100.000 2659 0 0 1 2659 28029706 28027048 0.000000e+00 4911
1 TraesCS6D01G059700 chr6D 97.959 980 14 4 1681 2659 19380315 19381289 0.000000e+00 1694
2 TraesCS6D01G059700 chr6D 84.178 493 52 15 1078 1563 28269252 28269725 3.120000e-124 455
3 TraesCS6D01G059700 chr6D 87.313 402 31 13 1136 1525 28162718 28162325 2.430000e-120 442
4 TraesCS6D01G059700 chr6D 86.856 388 40 6 1150 1529 28065384 28065000 8.800000e-115 424
5 TraesCS6D01G059700 chr3D 98.163 980 14 3 1681 2659 582573461 582574437 0.000000e+00 1707
6 TraesCS6D01G059700 chr3D 97.449 980 18 5 1681 2659 426067561 426068534 0.000000e+00 1664
7 TraesCS6D01G059700 chr5D 98.154 975 14 4 1686 2659 61638292 61639263 0.000000e+00 1698
8 TraesCS6D01G059700 chr5D 97.755 980 19 3 1681 2659 550609820 550610797 0.000000e+00 1685
9 TraesCS6D01G059700 chr5D 91.008 367 26 3 253 613 310170402 310170037 3.080000e-134 488
10 TraesCS6D01G059700 chrUn 97.959 980 15 3 1681 2659 30247128 30248103 0.000000e+00 1694
11 TraesCS6D01G059700 chrUn 89.236 576 42 6 953 1526 71734132 71734689 0.000000e+00 702
12 TraesCS6D01G059700 chr1D 97.857 980 13 5 1681 2659 62366063 62367035 0.000000e+00 1687
13 TraesCS6D01G059700 chr2D 97.748 977 14 5 1684 2659 118033165 118032196 0.000000e+00 1676
14 TraesCS6D01G059700 chr2D 97.444 978 19 4 1684 2659 33254139 33253166 0.000000e+00 1663
15 TraesCS6D01G059700 chr7A 93.485 614 34 3 1 608 200655952 200656565 0.000000e+00 907
16 TraesCS6D01G059700 chr4B 92.204 372 22 2 253 618 301753295 301752925 1.090000e-143 520
17 TraesCS6D01G059700 chr4B 91.935 372 23 2 253 618 301809836 301809466 5.080000e-142 514
18 TraesCS6D01G059700 chr4B 92.098 367 21 3 253 613 301836167 301835803 6.570000e-141 510
19 TraesCS6D01G059700 chr4B 91.667 372 24 3 253 618 301699479 301699109 2.360000e-140 508
20 TraesCS6D01G059700 chr4B 91.667 372 24 2 253 618 301780352 301779982 2.360000e-140 508
21 TraesCS6D01G059700 chr4B 91.398 372 25 2 253 618 301726026 301725656 1.100000e-138 503
22 TraesCS6D01G059700 chr4B 91.129 372 26 2 253 618 301861317 301860947 5.110000e-137 497
23 TraesCS6D01G059700 chr4B 93.385 257 17 0 1 257 301699776 301699520 5.370000e-102 381
24 TraesCS6D01G059700 chr4B 93.385 257 17 0 1 257 301726323 301726067 5.370000e-102 381
25 TraesCS6D01G059700 chr4B 93.385 257 17 0 1 257 301810133 301809877 5.370000e-102 381
26 TraesCS6D01G059700 chr4B 93.385 257 17 0 1 257 301836464 301836208 5.370000e-102 381
27 TraesCS6D01G059700 chr4B 92.996 257 18 0 1 257 301753592 301753336 2.500000e-100 375
28 TraesCS6D01G059700 chr4B 92.996 257 18 0 1 257 301780649 301780393 2.500000e-100 375
29 TraesCS6D01G059700 chr6B 87.118 458 43 11 1078 1526 52151945 52152395 3.050000e-139 505
30 TraesCS6D01G059700 chr6B 88.971 408 28 8 1132 1526 52113961 52114364 3.080000e-134 488
31 TraesCS6D01G059700 chr6B 92.218 257 20 0 1 257 433047239 433046983 5.410000e-97 364
32 TraesCS6D01G059700 chr6B 81.818 275 21 17 692 955 51962420 51962164 1.250000e-48 204
33 TraesCS6D01G059700 chr6B 79.310 319 30 19 734 1026 51965294 51964986 9.720000e-45 191
34 TraesCS6D01G059700 chr6A 93.994 333 18 1 1199 1529 29692962 29692630 1.100000e-138 503
35 TraesCS6D01G059700 chr6A 90.786 369 27 5 1200 1563 29795768 29796134 1.110000e-133 486
36 TraesCS6D01G059700 chr6A 84.335 466 48 16 1080 1539 29808971 29809417 1.460000e-117 433
37 TraesCS6D01G059700 chr5A 93.701 254 16 0 4 257 567111999 567111746 5.370000e-102 381


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G059700 chr6D 28027048 28029706 2658 True 4911.0 4911 100.0000 1 2659 1 chr6D.!!$R1 2658
1 TraesCS6D01G059700 chr6D 19380315 19381289 974 False 1694.0 1694 97.9590 1681 2659 1 chr6D.!!$F1 978
2 TraesCS6D01G059700 chr3D 582573461 582574437 976 False 1707.0 1707 98.1630 1681 2659 1 chr3D.!!$F2 978
3 TraesCS6D01G059700 chr3D 426067561 426068534 973 False 1664.0 1664 97.4490 1681 2659 1 chr3D.!!$F1 978
4 TraesCS6D01G059700 chr5D 61638292 61639263 971 False 1698.0 1698 98.1540 1686 2659 1 chr5D.!!$F1 973
5 TraesCS6D01G059700 chr5D 550609820 550610797 977 False 1685.0 1685 97.7550 1681 2659 1 chr5D.!!$F2 978
6 TraesCS6D01G059700 chrUn 30247128 30248103 975 False 1694.0 1694 97.9590 1681 2659 1 chrUn.!!$F1 978
7 TraesCS6D01G059700 chrUn 71734132 71734689 557 False 702.0 702 89.2360 953 1526 1 chrUn.!!$F2 573
8 TraesCS6D01G059700 chr1D 62366063 62367035 972 False 1687.0 1687 97.8570 1681 2659 1 chr1D.!!$F1 978
9 TraesCS6D01G059700 chr2D 118032196 118033165 969 True 1676.0 1676 97.7480 1684 2659 1 chr2D.!!$R2 975
10 TraesCS6D01G059700 chr2D 33253166 33254139 973 True 1663.0 1663 97.4440 1684 2659 1 chr2D.!!$R1 975
11 TraesCS6D01G059700 chr7A 200655952 200656565 613 False 907.0 907 93.4850 1 608 1 chr7A.!!$F1 607
12 TraesCS6D01G059700 chr4B 301752925 301753592 667 True 447.5 520 92.6000 1 618 2 chr4B.!!$R4 617
13 TraesCS6D01G059700 chr4B 301809466 301810133 667 True 447.5 514 92.6600 1 618 2 chr4B.!!$R6 617
14 TraesCS6D01G059700 chr4B 301835803 301836464 661 True 445.5 510 92.7415 1 613 2 chr4B.!!$R7 612
15 TraesCS6D01G059700 chr4B 301699109 301699776 667 True 444.5 508 92.5260 1 618 2 chr4B.!!$R2 617
16 TraesCS6D01G059700 chr4B 301725656 301726323 667 True 442.0 503 92.3915 1 618 2 chr4B.!!$R3 617
17 TraesCS6D01G059700 chr4B 301779982 301780649 667 True 441.5 508 92.3315 1 618 2 chr4B.!!$R5 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 705 0.035317 TGGCGACAGATCAAACAGCT 59.965 50.0 0.0 0.0 35.01 4.24 F
801 853 0.036294 GGAAAGGAGCTTGCCGTACT 60.036 55.0 0.0 0.0 28.37 2.73 F
1527 1580 0.102844 GCAAAGAGCAAAGCCACACA 59.897 50.0 0.0 0.0 44.79 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 1626 0.108585 TGCTTTGGTTCTCTCGGCTT 59.891 50.0 0.00 0.00 0.00 4.35 R
1607 1660 0.322816 TTTGAGCTGGTGCATCCCTC 60.323 55.0 7.57 7.57 42.74 4.30 R
2579 2635 0.980754 AGGTCACACCGCCATCCATA 60.981 55.0 0.00 0.00 44.90 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.344763 GAACTACCACTGTCACAGCCT 59.655 52.381 4.13 0.00 34.37 4.58
175 176 2.429930 CACTTCCAAGGGACCGCA 59.570 61.111 0.00 0.00 0.00 5.69
177 178 2.429930 CTTCCAAGGGACCGCACA 59.570 61.111 0.00 0.00 0.00 4.57
205 206 9.250624 GATCGTCTACTCAATATAAGCAAACTT 57.749 33.333 0.00 0.00 40.07 2.66
269 315 1.100510 CCAAGACCATCCTGTGCATG 58.899 55.000 0.00 0.00 0.00 4.06
294 340 5.123227 AGCTATCGGTTATTTGCTGCTTAA 58.877 37.500 0.00 0.00 0.00 1.85
299 345 3.608073 CGGTTATTTGCTGCTTAAACTGC 59.392 43.478 0.00 1.15 35.29 4.40
316 362 3.750371 ACTGCTGTGTGGTATGCTTTTA 58.250 40.909 0.00 0.00 0.00 1.52
375 421 1.898574 CTGCACGTCCAAAGGCCTT 60.899 57.895 13.78 13.78 0.00 4.35
518 570 9.646522 TTCCTGCATATAGTATCATGAGCTATA 57.353 33.333 21.82 21.82 33.76 1.31
531 583 8.668510 ATCATGAGCTATACTTTTCGAACAAT 57.331 30.769 0.09 0.00 0.00 2.71
575 627 3.259876 TCAATACTTGGCTTACACTCGGT 59.740 43.478 0.00 0.00 0.00 4.69
609 661 1.864435 GCGCAACGGGTCATCTAGTAG 60.864 57.143 0.30 0.00 0.00 2.57
610 662 1.404391 CGCAACGGGTCATCTAGTAGT 59.596 52.381 0.00 0.00 0.00 2.73
611 663 2.794981 CGCAACGGGTCATCTAGTAGTG 60.795 54.545 0.00 0.00 0.00 2.74
612 664 2.426024 GCAACGGGTCATCTAGTAGTGA 59.574 50.000 0.00 0.00 0.00 3.41
613 665 3.489398 GCAACGGGTCATCTAGTAGTGAG 60.489 52.174 0.00 0.00 0.00 3.51
614 666 2.933573 ACGGGTCATCTAGTAGTGAGG 58.066 52.381 0.00 0.00 0.00 3.86
615 667 2.508716 ACGGGTCATCTAGTAGTGAGGA 59.491 50.000 0.00 0.00 0.00 3.71
616 668 3.053842 ACGGGTCATCTAGTAGTGAGGAA 60.054 47.826 0.00 0.00 0.00 3.36
617 669 3.952323 CGGGTCATCTAGTAGTGAGGAAA 59.048 47.826 0.00 0.00 0.00 3.13
618 670 4.036971 CGGGTCATCTAGTAGTGAGGAAAG 59.963 50.000 0.00 0.00 0.00 2.62
619 671 4.342665 GGGTCATCTAGTAGTGAGGAAAGG 59.657 50.000 0.00 0.00 0.00 3.11
620 672 4.342665 GGTCATCTAGTAGTGAGGAAAGGG 59.657 50.000 0.00 0.00 0.00 3.95
621 673 3.961408 TCATCTAGTAGTGAGGAAAGGGC 59.039 47.826 0.00 0.00 0.00 5.19
622 674 2.748388 TCTAGTAGTGAGGAAAGGGCC 58.252 52.381 0.00 0.00 0.00 5.80
623 675 2.043939 TCTAGTAGTGAGGAAAGGGCCA 59.956 50.000 6.18 0.00 0.00 5.36
624 676 1.280457 AGTAGTGAGGAAAGGGCCAG 58.720 55.000 6.18 0.00 0.00 4.85
625 677 0.253327 GTAGTGAGGAAAGGGCCAGG 59.747 60.000 6.18 0.00 0.00 4.45
626 678 1.562672 TAGTGAGGAAAGGGCCAGGC 61.563 60.000 6.18 1.26 0.00 4.85
652 704 2.543578 TGGCGACAGATCAAACAGC 58.456 52.632 0.00 0.00 35.01 4.40
653 705 0.035317 TGGCGACAGATCAAACAGCT 59.965 50.000 0.00 0.00 35.01 4.24
654 706 0.723981 GGCGACAGATCAAACAGCTC 59.276 55.000 0.00 0.00 0.00 4.09
655 707 1.674221 GGCGACAGATCAAACAGCTCT 60.674 52.381 0.00 0.00 0.00 4.09
656 708 1.658095 GCGACAGATCAAACAGCTCTC 59.342 52.381 0.00 0.00 0.00 3.20
657 709 1.916651 CGACAGATCAAACAGCTCTCG 59.083 52.381 0.00 0.00 0.00 4.04
658 710 2.414691 CGACAGATCAAACAGCTCTCGA 60.415 50.000 0.00 0.00 0.00 4.04
659 711 3.178267 GACAGATCAAACAGCTCTCGAG 58.822 50.000 5.93 5.93 0.00 4.04
660 712 2.094286 ACAGATCAAACAGCTCTCGAGG 60.094 50.000 13.56 4.50 0.00 4.63
661 713 1.134848 AGATCAAACAGCTCTCGAGGC 60.135 52.381 13.56 14.73 0.00 4.70
662 714 0.459237 ATCAAACAGCTCTCGAGGCG 60.459 55.000 13.56 12.79 34.52 5.52
663 715 2.097038 CAAACAGCTCTCGAGGCGG 61.097 63.158 13.56 16.94 34.52 6.13
664 716 3.941657 AAACAGCTCTCGAGGCGGC 62.942 63.158 19.93 17.40 34.52 6.53
666 718 4.869440 CAGCTCTCGAGGCGGCAG 62.869 72.222 13.56 4.73 34.52 4.85
668 720 3.910490 GCTCTCGAGGCGGCAGAT 61.910 66.667 13.56 0.00 0.00 2.90
669 721 2.334653 CTCTCGAGGCGGCAGATC 59.665 66.667 13.56 0.00 0.00 2.75
670 722 2.124109 TCTCGAGGCGGCAGATCT 60.124 61.111 13.56 0.00 0.00 2.75
671 723 2.128853 CTCTCGAGGCGGCAGATCTC 62.129 65.000 13.56 0.00 0.00 2.75
672 724 2.124109 TCGAGGCGGCAGATCTCT 60.124 61.111 13.08 0.00 0.00 3.10
673 725 2.027314 CGAGGCGGCAGATCTCTG 59.973 66.667 13.08 2.75 46.40 3.35
674 726 2.420890 GAGGCGGCAGATCTCTGG 59.579 66.667 13.08 0.00 43.94 3.86
680 732 2.279120 GCAGATCTCTGGCCGACG 60.279 66.667 9.15 0.00 43.94 5.12
681 733 2.415010 CAGATCTCTGGCCGACGG 59.585 66.667 10.29 10.29 40.20 4.79
682 734 2.835431 AGATCTCTGGCCGACGGG 60.835 66.667 17.22 0.00 0.00 5.28
683 735 3.148279 GATCTCTGGCCGACGGGT 61.148 66.667 17.22 0.00 34.97 5.28
684 736 1.826921 GATCTCTGGCCGACGGGTA 60.827 63.158 17.22 0.00 34.97 3.69
685 737 1.797211 GATCTCTGGCCGACGGGTAG 61.797 65.000 17.22 0.00 34.97 3.18
686 738 2.569218 ATCTCTGGCCGACGGGTAGT 62.569 60.000 17.22 0.00 34.97 2.73
687 739 3.064987 CTCTGGCCGACGGGTAGTG 62.065 68.421 17.22 0.00 34.97 2.74
688 740 3.379445 CTGGCCGACGGGTAGTGT 61.379 66.667 17.22 0.00 34.97 3.55
689 741 3.352338 CTGGCCGACGGGTAGTGTC 62.352 68.421 17.22 0.00 34.97 3.67
690 742 3.376078 GGCCGACGGGTAGTGTCA 61.376 66.667 17.22 0.00 36.11 3.58
691 743 2.126189 GCCGACGGGTAGTGTCAC 60.126 66.667 17.22 0.00 36.11 3.67
692 744 2.570181 CCGACGGGTAGTGTCACC 59.430 66.667 5.81 0.00 36.11 4.02
704 756 6.644248 GGTAGTGTCACCCTTGTAAAATTT 57.356 37.500 0.00 0.00 31.91 1.82
705 757 6.443792 GGTAGTGTCACCCTTGTAAAATTTG 58.556 40.000 0.00 0.00 31.91 2.32
706 758 6.263617 GGTAGTGTCACCCTTGTAAAATTTGA 59.736 38.462 0.00 0.00 31.91 2.69
707 759 6.783708 AGTGTCACCCTTGTAAAATTTGAA 57.216 33.333 0.00 0.00 0.00 2.69
708 760 7.360113 AGTGTCACCCTTGTAAAATTTGAAT 57.640 32.000 0.00 0.00 0.00 2.57
709 761 8.472007 AGTGTCACCCTTGTAAAATTTGAATA 57.528 30.769 0.00 0.00 0.00 1.75
710 762 8.919145 AGTGTCACCCTTGTAAAATTTGAATAA 58.081 29.630 0.00 0.00 0.00 1.40
711 763 9.535878 GTGTCACCCTTGTAAAATTTGAATAAA 57.464 29.630 0.00 0.00 0.00 1.40
733 785 6.620877 AAAAAGGGAAGGATATGAAAACCC 57.379 37.500 0.00 0.00 36.47 4.11
734 786 4.965283 AAGGGAAGGATATGAAAACCCA 57.035 40.909 0.00 0.00 38.42 4.51
735 787 5.487861 AAGGGAAGGATATGAAAACCCAT 57.512 39.130 0.00 0.00 38.42 4.00
736 788 6.606241 AAGGGAAGGATATGAAAACCCATA 57.394 37.500 0.00 0.00 38.42 2.74
737 789 6.803587 AGGGAAGGATATGAAAACCCATAT 57.196 37.500 0.00 0.00 41.12 1.78
738 790 7.179460 AGGGAAGGATATGAAAACCCATATT 57.821 36.000 0.00 0.00 39.20 1.28
739 791 7.604722 AGGGAAGGATATGAAAACCCATATTT 58.395 34.615 0.00 0.00 39.20 1.40
740 792 7.730332 AGGGAAGGATATGAAAACCCATATTTC 59.270 37.037 0.00 0.00 39.20 2.17
741 793 7.730332 GGGAAGGATATGAAAACCCATATTTCT 59.270 37.037 0.00 0.00 39.20 2.52
742 794 8.579863 GGAAGGATATGAAAACCCATATTTCTG 58.420 37.037 0.00 0.00 39.20 3.02
743 795 9.354673 GAAGGATATGAAAACCCATATTTCTGA 57.645 33.333 0.00 0.00 39.20 3.27
744 796 8.930846 AGGATATGAAAACCCATATTTCTGAG 57.069 34.615 0.00 0.00 39.20 3.35
745 797 7.946776 AGGATATGAAAACCCATATTTCTGAGG 59.053 37.037 0.00 0.00 39.20 3.86
746 798 7.944554 GGATATGAAAACCCATATTTCTGAGGA 59.055 37.037 0.00 0.00 39.20 3.71
747 799 8.697507 ATATGAAAACCCATATTTCTGAGGAC 57.302 34.615 0.00 0.00 36.60 3.85
748 800 4.941263 TGAAAACCCATATTTCTGAGGACG 59.059 41.667 0.00 0.00 37.60 4.79
749 801 3.560636 AACCCATATTTCTGAGGACGG 57.439 47.619 0.00 0.00 0.00 4.79
750 802 2.759355 ACCCATATTTCTGAGGACGGA 58.241 47.619 0.00 0.00 0.00 4.69
751 803 2.700897 ACCCATATTTCTGAGGACGGAG 59.299 50.000 0.00 0.00 32.64 4.63
752 804 9.895833 GAAAACCCATATTTCTGAGGACGGAGT 62.896 44.444 0.00 0.00 37.34 3.85
767 819 3.240069 ACGGAGTCAATAAGAACGAACG 58.760 45.455 0.00 0.00 29.74 3.95
768 820 3.240069 CGGAGTCAATAAGAACGAACGT 58.760 45.455 0.00 0.00 0.00 3.99
769 821 3.671928 CGGAGTCAATAAGAACGAACGTT 59.328 43.478 12.30 12.30 41.54 3.99
770 822 4.149396 CGGAGTCAATAAGAACGAACGTTT 59.851 41.667 13.56 2.21 38.60 3.60
771 823 5.371629 GGAGTCAATAAGAACGAACGTTTG 58.628 41.667 14.14 14.14 38.60 2.93
772 824 5.050567 GGAGTCAATAAGAACGAACGTTTGT 60.051 40.000 15.61 15.61 38.60 2.83
773 825 5.970879 AGTCAATAAGAACGAACGTTTGTC 58.029 37.500 21.19 14.14 38.60 3.18
774 826 5.050567 AGTCAATAAGAACGAACGTTTGTCC 60.051 40.000 21.19 9.41 38.60 4.02
775 827 4.211794 TCAATAAGAACGAACGTTTGTCCC 59.788 41.667 21.19 15.42 38.60 4.46
776 828 0.932399 AAGAACGAACGTTTGTCCCG 59.068 50.000 21.19 12.80 38.60 5.14
777 829 1.083209 GAACGAACGTTTGTCCCGC 60.083 57.895 21.19 8.08 38.60 6.13
778 830 2.434225 GAACGAACGTTTGTCCCGCC 62.434 60.000 21.19 5.62 38.60 6.13
779 831 2.968156 CGAACGTTTGTCCCGCCA 60.968 61.111 0.46 0.00 0.00 5.69
780 832 2.943653 GAACGTTTGTCCCGCCAG 59.056 61.111 0.46 0.00 0.00 4.85
781 833 3.249973 GAACGTTTGTCCCGCCAGC 62.250 63.158 0.46 0.00 0.00 4.85
792 844 4.767255 CGCCAGCGGAAAGGAGCT 62.767 66.667 3.61 0.00 45.74 4.09
793 845 2.360475 GCCAGCGGAAAGGAGCTT 60.360 61.111 0.00 0.00 42.52 3.74
794 846 2.694760 GCCAGCGGAAAGGAGCTTG 61.695 63.158 0.00 0.00 42.52 4.01
795 847 2.694760 CCAGCGGAAAGGAGCTTGC 61.695 63.158 0.00 0.00 42.52 4.01
796 848 2.360475 AGCGGAAAGGAGCTTGCC 60.360 61.111 0.00 0.00 41.52 4.52
800 852 2.467962 GGAAAGGAGCTTGCCGTAC 58.532 57.895 0.00 0.00 28.37 3.67
801 853 0.036294 GGAAAGGAGCTTGCCGTACT 60.036 55.000 0.00 0.00 28.37 2.73
802 854 1.610886 GGAAAGGAGCTTGCCGTACTT 60.611 52.381 0.00 0.00 28.37 2.24
803 855 2.354403 GGAAAGGAGCTTGCCGTACTTA 60.354 50.000 0.00 0.00 28.37 2.24
804 856 3.332034 GAAAGGAGCTTGCCGTACTTAA 58.668 45.455 0.00 0.00 0.00 1.85
805 857 3.412237 AAGGAGCTTGCCGTACTTAAA 57.588 42.857 0.00 0.00 0.00 1.52
806 858 3.629142 AGGAGCTTGCCGTACTTAAAT 57.371 42.857 0.00 0.00 0.00 1.40
807 859 3.951663 AGGAGCTTGCCGTACTTAAATT 58.048 40.909 0.00 0.00 0.00 1.82
808 860 4.332828 AGGAGCTTGCCGTACTTAAATTT 58.667 39.130 0.00 0.00 0.00 1.82
809 861 4.395231 AGGAGCTTGCCGTACTTAAATTTC 59.605 41.667 0.00 0.00 0.00 2.17
810 862 4.331962 GAGCTTGCCGTACTTAAATTTCG 58.668 43.478 0.00 0.00 0.00 3.46
811 863 3.749609 AGCTTGCCGTACTTAAATTTCGT 59.250 39.130 0.00 0.00 0.00 3.85
812 864 4.214758 AGCTTGCCGTACTTAAATTTCGTT 59.785 37.500 0.00 0.00 0.00 3.85
813 865 4.913345 GCTTGCCGTACTTAAATTTCGTTT 59.087 37.500 0.00 0.00 0.00 3.60
814 866 5.058856 GCTTGCCGTACTTAAATTTCGTTTC 59.941 40.000 0.00 0.00 0.00 2.78
815 867 5.033326 TGCCGTACTTAAATTTCGTTTCC 57.967 39.130 0.00 0.00 0.00 3.13
816 868 4.756135 TGCCGTACTTAAATTTCGTTTCCT 59.244 37.500 0.00 0.00 0.00 3.36
817 869 5.106987 TGCCGTACTTAAATTTCGTTTCCTC 60.107 40.000 0.00 0.00 0.00 3.71
818 870 5.121298 GCCGTACTTAAATTTCGTTTCCTCT 59.879 40.000 0.00 0.00 0.00 3.69
819 871 6.347969 GCCGTACTTAAATTTCGTTTCCTCTT 60.348 38.462 0.00 0.00 0.00 2.85
820 872 7.232300 CCGTACTTAAATTTCGTTTCCTCTTC 58.768 38.462 0.00 0.00 0.00 2.87
821 873 7.232300 CGTACTTAAATTTCGTTTCCTCTTCC 58.768 38.462 0.00 0.00 0.00 3.46
822 874 7.117379 CGTACTTAAATTTCGTTTCCTCTTCCT 59.883 37.037 0.00 0.00 0.00 3.36
823 875 7.818997 ACTTAAATTTCGTTTCCTCTTCCTT 57.181 32.000 0.00 0.00 0.00 3.36
824 876 7.649057 ACTTAAATTTCGTTTCCTCTTCCTTG 58.351 34.615 0.00 0.00 0.00 3.61
825 877 7.284716 ACTTAAATTTCGTTTCCTCTTCCTTGT 59.715 33.333 0.00 0.00 0.00 3.16
826 878 5.690997 AATTTCGTTTCCTCTTCCTTGTC 57.309 39.130 0.00 0.00 0.00 3.18
827 879 2.833631 TCGTTTCCTCTTCCTTGTCC 57.166 50.000 0.00 0.00 0.00 4.02
828 880 2.043992 TCGTTTCCTCTTCCTTGTCCA 58.956 47.619 0.00 0.00 0.00 4.02
829 881 2.436542 TCGTTTCCTCTTCCTTGTCCAA 59.563 45.455 0.00 0.00 0.00 3.53
830 882 2.548480 CGTTTCCTCTTCCTTGTCCAAC 59.452 50.000 0.00 0.00 0.00 3.77
831 883 3.744530 CGTTTCCTCTTCCTTGTCCAACT 60.745 47.826 0.00 0.00 0.00 3.16
832 884 4.207955 GTTTCCTCTTCCTTGTCCAACTT 58.792 43.478 0.00 0.00 0.00 2.66
833 885 3.492102 TCCTCTTCCTTGTCCAACTTG 57.508 47.619 0.00 0.00 0.00 3.16
834 886 3.045634 TCCTCTTCCTTGTCCAACTTGA 58.954 45.455 0.00 0.00 0.00 3.02
835 887 3.071602 TCCTCTTCCTTGTCCAACTTGAG 59.928 47.826 0.00 0.00 0.00 3.02
836 888 3.071602 CCTCTTCCTTGTCCAACTTGAGA 59.928 47.826 0.00 0.00 0.00 3.27
837 889 4.314121 CTCTTCCTTGTCCAACTTGAGAG 58.686 47.826 0.00 0.00 0.00 3.20
838 890 3.967326 TCTTCCTTGTCCAACTTGAGAGA 59.033 43.478 0.00 0.00 0.00 3.10
839 891 4.594920 TCTTCCTTGTCCAACTTGAGAGAT 59.405 41.667 0.00 0.00 0.00 2.75
840 892 4.543590 TCCTTGTCCAACTTGAGAGATC 57.456 45.455 0.00 0.00 0.00 2.75
841 893 4.163427 TCCTTGTCCAACTTGAGAGATCT 58.837 43.478 0.00 0.00 0.00 2.75
842 894 4.020751 TCCTTGTCCAACTTGAGAGATCTG 60.021 45.833 0.00 0.00 0.00 2.90
843 895 4.262808 CCTTGTCCAACTTGAGAGATCTGT 60.263 45.833 0.00 0.00 0.00 3.41
844 896 4.527509 TGTCCAACTTGAGAGATCTGTC 57.472 45.455 12.86 12.86 0.00 3.51
845 897 4.155709 TGTCCAACTTGAGAGATCTGTCT 58.844 43.478 19.64 2.72 37.42 3.41
846 898 4.021632 TGTCCAACTTGAGAGATCTGTCTG 60.022 45.833 19.64 14.46 33.97 3.51
847 899 4.021544 GTCCAACTTGAGAGATCTGTCTGT 60.022 45.833 19.64 15.02 33.97 3.41
848 900 5.184096 GTCCAACTTGAGAGATCTGTCTGTA 59.816 44.000 19.64 5.76 33.97 2.74
849 901 5.184096 TCCAACTTGAGAGATCTGTCTGTAC 59.816 44.000 19.64 0.00 33.97 2.90
850 902 5.184864 CCAACTTGAGAGATCTGTCTGTACT 59.815 44.000 19.64 0.00 33.97 2.73
851 903 6.321717 CAACTTGAGAGATCTGTCTGTACTC 58.678 44.000 19.64 9.45 33.97 2.59
852 904 4.947388 ACTTGAGAGATCTGTCTGTACTCC 59.053 45.833 19.64 0.00 33.97 3.85
853 905 3.536570 TGAGAGATCTGTCTGTACTCCG 58.463 50.000 19.64 0.00 33.97 4.63
854 906 3.055021 TGAGAGATCTGTCTGTACTCCGT 60.055 47.826 19.64 0.00 33.97 4.69
855 907 4.161754 TGAGAGATCTGTCTGTACTCCGTA 59.838 45.833 19.64 0.00 33.97 4.02
856 908 5.163290 TGAGAGATCTGTCTGTACTCCGTAT 60.163 44.000 19.64 0.00 33.97 3.06
857 909 6.041751 TGAGAGATCTGTCTGTACTCCGTATA 59.958 42.308 19.64 0.00 33.97 1.47
858 910 6.225318 AGAGATCTGTCTGTACTCCGTATAC 58.775 44.000 0.00 0.00 33.97 1.47
859 911 5.926663 AGATCTGTCTGTACTCCGTATACA 58.073 41.667 3.32 0.00 32.13 2.29
869 921 6.567050 TGTACTCCGTATACAGAACAAATCC 58.433 40.000 3.32 0.00 0.00 3.01
870 922 4.679662 ACTCCGTATACAGAACAAATCCG 58.320 43.478 3.32 0.00 0.00 4.18
871 923 4.159135 ACTCCGTATACAGAACAAATCCGT 59.841 41.667 3.32 0.00 0.00 4.69
872 924 4.426416 TCCGTATACAGAACAAATCCGTG 58.574 43.478 3.32 0.00 0.00 4.94
873 925 3.000925 CCGTATACAGAACAAATCCGTGC 59.999 47.826 3.32 0.00 0.00 5.34
874 926 3.301579 CGTATACAGAACAAATCCGTGCG 60.302 47.826 3.32 0.00 0.00 5.34
875 927 1.434555 TACAGAACAAATCCGTGCGG 58.565 50.000 3.94 3.94 0.00 5.69
884 936 4.228567 TCCGTGCGGACACTGCAA 62.229 61.111 9.48 0.00 45.23 4.08
885 937 3.276091 CCGTGCGGACACTGCAAA 61.276 61.111 8.11 0.00 45.23 3.68
886 938 2.616330 CCGTGCGGACACTGCAAAT 61.616 57.895 8.11 0.00 45.23 2.32
887 939 1.282570 CGTGCGGACACTGCAAATT 59.717 52.632 8.11 0.00 45.23 1.82
888 940 0.515127 CGTGCGGACACTGCAAATTA 59.485 50.000 8.11 0.00 45.23 1.40
889 941 1.130373 CGTGCGGACACTGCAAATTAT 59.870 47.619 8.11 0.00 45.23 1.28
890 942 2.785679 GTGCGGACACTGCAAATTATC 58.214 47.619 0.63 0.00 45.23 1.75
891 943 1.742831 TGCGGACACTGCAAATTATCC 59.257 47.619 2.65 0.00 39.87 2.59
892 944 2.017049 GCGGACACTGCAAATTATCCT 58.983 47.619 0.00 0.00 0.00 3.24
893 945 3.202906 GCGGACACTGCAAATTATCCTA 58.797 45.455 0.00 0.00 0.00 2.94
894 946 3.248602 GCGGACACTGCAAATTATCCTAG 59.751 47.826 0.00 0.00 0.00 3.02
895 947 4.442706 CGGACACTGCAAATTATCCTAGT 58.557 43.478 0.00 0.00 0.00 2.57
896 948 5.597806 CGGACACTGCAAATTATCCTAGTA 58.402 41.667 0.00 0.00 0.00 1.82
897 949 6.223852 CGGACACTGCAAATTATCCTAGTAT 58.776 40.000 0.00 0.00 0.00 2.12
898 950 7.375834 CGGACACTGCAAATTATCCTAGTATA 58.624 38.462 0.00 0.00 0.00 1.47
899 951 7.328737 CGGACACTGCAAATTATCCTAGTATAC 59.671 40.741 0.00 0.00 0.00 1.47
900 952 8.368668 GGACACTGCAAATTATCCTAGTATACT 58.631 37.037 10.87 10.87 0.00 2.12
901 953 9.197694 GACACTGCAAATTATCCTAGTATACTG 57.802 37.037 15.90 5.61 0.00 2.74
902 954 8.705594 ACACTGCAAATTATCCTAGTATACTGT 58.294 33.333 15.90 1.92 0.00 3.55
903 955 8.982685 CACTGCAAATTATCCTAGTATACTGTG 58.017 37.037 15.90 8.02 0.00 3.66
904 956 8.924303 ACTGCAAATTATCCTAGTATACTGTGA 58.076 33.333 15.90 11.49 0.00 3.58
905 957 9.935241 CTGCAAATTATCCTAGTATACTGTGAT 57.065 33.333 15.90 17.06 0.00 3.06
913 965 7.809546 TCCTAGTATACTGTGATTGTCTCTG 57.190 40.000 15.90 0.00 0.00 3.35
914 966 7.347252 TCCTAGTATACTGTGATTGTCTCTGT 58.653 38.462 15.90 0.00 0.00 3.41
915 967 7.834681 TCCTAGTATACTGTGATTGTCTCTGTT 59.165 37.037 15.90 0.00 0.00 3.16
916 968 7.918033 CCTAGTATACTGTGATTGTCTCTGTTG 59.082 40.741 15.90 0.00 0.00 3.33
917 969 7.468141 AGTATACTGTGATTGTCTCTGTTGA 57.532 36.000 4.10 0.00 0.00 3.18
918 970 7.316640 AGTATACTGTGATTGTCTCTGTTGAC 58.683 38.462 4.10 0.00 37.47 3.18
919 971 4.406648 ACTGTGATTGTCTCTGTTGACA 57.593 40.909 0.00 0.00 44.17 3.58
920 972 4.375272 ACTGTGATTGTCTCTGTTGACAG 58.625 43.478 4.77 4.77 46.02 3.51
921 973 3.732212 TGTGATTGTCTCTGTTGACAGG 58.268 45.455 10.97 2.92 46.02 4.00
922 974 3.070018 GTGATTGTCTCTGTTGACAGGG 58.930 50.000 10.97 7.96 46.02 4.45
926 978 3.550692 TCTCTGTTGACAGGGACCA 57.449 52.632 9.59 0.00 45.72 4.02
927 979 2.030027 TCTCTGTTGACAGGGACCAT 57.970 50.000 9.59 0.00 45.72 3.55
928 980 2.338809 TCTCTGTTGACAGGGACCATT 58.661 47.619 9.59 0.00 45.72 3.16
929 981 2.711009 TCTCTGTTGACAGGGACCATTT 59.289 45.455 9.59 0.00 45.72 2.32
930 982 2.862541 TCTGTTGACAGGGACCATTTG 58.137 47.619 10.97 0.00 43.91 2.32
931 983 1.888512 CTGTTGACAGGGACCATTTGG 59.111 52.381 3.19 0.00 40.20 3.28
932 984 2.752829 CTGTTGACAGGGACCATTTGGT 60.753 50.000 0.83 0.83 44.95 3.67
933 985 3.497763 CTGTTGACAGGGACCATTTGGTA 60.498 47.826 1.35 0.00 43.54 3.25
934 986 4.990560 CTGTTGACAGGGACCATTTGGTAA 60.991 45.833 1.35 0.00 43.54 2.85
935 987 7.003538 CTGTTGACAGGGACCATTTGGTAAC 62.004 48.000 1.35 2.64 43.54 2.50
992 1044 3.503363 GCCCGCAGTCAGCATCAC 61.503 66.667 0.00 0.00 46.13 3.06
1023 1075 2.159226 CCACAGAGCCTACGTTTCCTAG 60.159 54.545 0.00 0.00 0.00 3.02
1027 1079 1.749634 GAGCCTACGTTTCCTAGCTCA 59.250 52.381 0.00 0.00 44.73 4.26
1032 1084 3.192844 CCTACGTTTCCTAGCTCAACTGA 59.807 47.826 0.00 0.00 0.00 3.41
1038 1090 1.623811 TCCTAGCTCAACTGAACCACC 59.376 52.381 0.00 0.00 0.00 4.61
1044 1096 0.179234 TCAACTGAACCACCGCTGAA 59.821 50.000 0.00 0.00 0.00 3.02
1065 1117 7.595819 TGAATCTTCACAAATTAACCACCTT 57.404 32.000 0.00 0.00 31.01 3.50
1087 1139 6.756074 CCTTCTGAATCTTCATCTCACACTAC 59.244 42.308 0.00 0.00 36.46 2.73
1098 1150 7.543947 TCATCTCACACTACAAAAGCATATG 57.456 36.000 0.00 0.00 0.00 1.78
1112 1164 1.822506 CATATGGCATGGCTCTCCTG 58.177 55.000 21.08 7.09 0.00 3.86
1113 1165 1.073444 CATATGGCATGGCTCTCCTGT 59.927 52.381 21.08 0.75 0.00 4.00
1117 1169 1.153208 GCATGGCTCTCCTGTCCTG 60.153 63.158 0.00 0.00 0.00 3.86
1125 1177 0.611896 TCTCCTGTCCTGTGCATCGA 60.612 55.000 0.00 0.00 0.00 3.59
1127 1179 0.176449 TCCTGTCCTGTGCATCGATG 59.824 55.000 21.27 21.27 0.00 3.84
1130 1182 2.079158 CTGTCCTGTGCATCGATGTTT 58.921 47.619 25.47 0.00 0.00 2.83
1137 1189 3.669536 TGTGCATCGATGTTTAGGACAA 58.330 40.909 25.47 3.33 42.62 3.18
1154 1206 1.000394 ACAACATCACACGATCGACCA 60.000 47.619 24.34 2.53 0.00 4.02
1155 1207 2.270923 CAACATCACACGATCGACCAT 58.729 47.619 24.34 4.98 0.00 3.55
1156 1208 2.209838 ACATCACACGATCGACCATC 57.790 50.000 24.34 0.00 0.00 3.51
1157 1209 1.476488 ACATCACACGATCGACCATCA 59.524 47.619 24.34 0.20 0.00 3.07
1158 1210 2.094234 ACATCACACGATCGACCATCAA 60.094 45.455 24.34 0.41 0.00 2.57
1159 1211 1.990799 TCACACGATCGACCATCAAC 58.009 50.000 24.34 0.00 0.00 3.18
1160 1212 1.271102 TCACACGATCGACCATCAACA 59.729 47.619 24.34 0.00 0.00 3.33
1161 1213 2.065512 CACACGATCGACCATCAACAA 58.934 47.619 24.34 0.00 0.00 2.83
1162 1214 2.478514 CACACGATCGACCATCAACAAA 59.521 45.455 24.34 0.00 0.00 2.83
1163 1215 3.125146 CACACGATCGACCATCAACAAAT 59.875 43.478 24.34 0.00 0.00 2.32
1164 1216 3.370978 ACACGATCGACCATCAACAAATC 59.629 43.478 24.34 0.00 0.00 2.17
1165 1217 3.370672 CACGATCGACCATCAACAAATCA 59.629 43.478 24.34 0.00 0.00 2.57
1166 1218 3.370978 ACGATCGACCATCAACAAATCAC 59.629 43.478 24.34 0.00 0.00 3.06
1167 1219 3.370672 CGATCGACCATCAACAAATCACA 59.629 43.478 10.26 0.00 0.00 3.58
1168 1220 4.142924 CGATCGACCATCAACAAATCACAA 60.143 41.667 10.26 0.00 0.00 3.33
1169 1221 4.481930 TCGACCATCAACAAATCACAAC 57.518 40.909 0.00 0.00 0.00 3.32
1170 1222 3.252215 TCGACCATCAACAAATCACAACC 59.748 43.478 0.00 0.00 0.00 3.77
1182 1234 4.265056 ACAACCTTTCCCCGCGCT 62.265 61.111 5.56 0.00 0.00 5.92
1183 1235 2.046700 CAACCTTTCCCCGCGCTA 60.047 61.111 5.56 0.00 0.00 4.26
1230 1282 0.179119 GAACATCAGCAGCAATGGCC 60.179 55.000 11.34 0.00 42.56 5.36
1270 1322 0.318784 GGCCGAAGCATACTACCTCG 60.319 60.000 0.00 0.00 42.56 4.63
1371 1424 4.767255 GAGAGGGTGCTGGTGCGG 62.767 72.222 0.00 0.00 43.34 5.69
1376 1429 4.451150 GGTGCTGGTGCGGATCGA 62.451 66.667 0.00 0.00 43.34 3.59
1377 1430 2.202932 GTGCTGGTGCGGATCGAT 60.203 61.111 0.00 0.00 43.34 3.59
1440 1493 2.886124 GAGCAGTTCGGCTACGGC 60.886 66.667 0.00 4.15 45.99 5.68
1464 1517 2.764128 GGCGTCCTGAGGATCCCA 60.764 66.667 8.55 5.41 32.73 4.37
1467 1520 1.690219 GCGTCCTGAGGATCCCATGT 61.690 60.000 8.55 0.00 32.73 3.21
1485 1538 1.153269 TGACGCACAGCAGTTCCAA 60.153 52.632 0.00 0.00 0.00 3.53
1487 1540 2.249309 CGCACAGCAGTTCCAACG 59.751 61.111 0.00 0.00 0.00 4.10
1488 1541 2.639286 GCACAGCAGTTCCAACGG 59.361 61.111 0.00 0.00 0.00 4.44
1491 1544 0.518636 CACAGCAGTTCCAACGGATG 59.481 55.000 6.33 6.33 44.17 3.51
1526 1579 2.890941 GCAAAGAGCAAAGCCACAC 58.109 52.632 0.00 0.00 44.79 3.82
1527 1580 0.102844 GCAAAGAGCAAAGCCACACA 59.897 50.000 0.00 0.00 44.79 3.72
1528 1581 1.866880 GCAAAGAGCAAAGCCACACAG 60.867 52.381 0.00 0.00 44.79 3.66
1529 1582 1.035139 AAAGAGCAAAGCCACACAGG 58.965 50.000 0.00 0.00 41.84 4.00
1530 1583 0.183492 AAGAGCAAAGCCACACAGGA 59.817 50.000 0.00 0.00 41.22 3.86
1531 1584 0.403271 AGAGCAAAGCCACACAGGAT 59.597 50.000 0.00 0.00 41.22 3.24
1532 1585 1.630369 AGAGCAAAGCCACACAGGATA 59.370 47.619 0.00 0.00 41.22 2.59
1533 1586 2.012673 GAGCAAAGCCACACAGGATAG 58.987 52.381 0.00 0.00 41.22 2.08
1534 1587 1.098050 GCAAAGCCACACAGGATAGG 58.902 55.000 0.00 0.00 41.22 2.57
1535 1588 1.614317 GCAAAGCCACACAGGATAGGT 60.614 52.381 0.00 0.00 41.22 3.08
1536 1589 2.355716 GCAAAGCCACACAGGATAGGTA 60.356 50.000 0.00 0.00 41.22 3.08
1537 1590 3.685550 GCAAAGCCACACAGGATAGGTAT 60.686 47.826 0.00 0.00 41.22 2.73
1538 1591 4.526970 CAAAGCCACACAGGATAGGTATT 58.473 43.478 0.00 0.00 41.22 1.89
1539 1592 5.680619 CAAAGCCACACAGGATAGGTATTA 58.319 41.667 0.00 0.00 41.22 0.98
1540 1593 5.552870 AAGCCACACAGGATAGGTATTAG 57.447 43.478 0.00 0.00 41.22 1.73
1541 1594 3.904339 AGCCACACAGGATAGGTATTAGG 59.096 47.826 0.00 0.00 41.22 2.69
1542 1595 3.646637 GCCACACAGGATAGGTATTAGGT 59.353 47.826 0.00 0.00 41.22 3.08
1543 1596 4.836736 GCCACACAGGATAGGTATTAGGTA 59.163 45.833 0.00 0.00 41.22 3.08
1544 1597 5.047235 GCCACACAGGATAGGTATTAGGTAG 60.047 48.000 0.00 0.00 41.22 3.18
1545 1598 6.075984 CCACACAGGATAGGTATTAGGTAGT 58.924 44.000 0.00 0.00 41.22 2.73
1546 1599 6.015350 CCACACAGGATAGGTATTAGGTAGTG 60.015 46.154 0.00 0.00 41.22 2.74
1547 1600 6.776116 CACACAGGATAGGTATTAGGTAGTGA 59.224 42.308 0.00 0.00 0.00 3.41
1548 1601 7.451877 CACACAGGATAGGTATTAGGTAGTGAT 59.548 40.741 0.00 0.00 0.00 3.06
1549 1602 8.011290 ACACAGGATAGGTATTAGGTAGTGATT 58.989 37.037 0.00 0.00 0.00 2.57
1550 1603 9.529823 CACAGGATAGGTATTAGGTAGTGATTA 57.470 37.037 0.00 0.00 0.00 1.75
1558 1611 9.375974 AGGTATTAGGTAGTGATTATTACTGCA 57.624 33.333 7.42 0.00 33.18 4.41
1559 1612 9.420551 GGTATTAGGTAGTGATTATTACTGCAC 57.579 37.037 7.42 0.00 33.18 4.57
1560 1613 9.976511 GTATTAGGTAGTGATTATTACTGCACA 57.023 33.333 7.42 0.00 33.18 4.57
1562 1615 9.712305 ATTAGGTAGTGATTATTACTGCACATC 57.288 33.333 7.42 0.00 33.18 3.06
1563 1616 7.124573 AGGTAGTGATTATTACTGCACATCA 57.875 36.000 7.42 0.00 33.18 3.07
1564 1617 7.739825 AGGTAGTGATTATTACTGCACATCAT 58.260 34.615 7.42 0.00 33.18 2.45
1565 1618 8.870116 AGGTAGTGATTATTACTGCACATCATA 58.130 33.333 7.42 0.00 33.18 2.15
1566 1619 8.926710 GGTAGTGATTATTACTGCACATCATAC 58.073 37.037 7.42 0.00 33.18 2.39
1567 1620 7.969536 AGTGATTATTACTGCACATCATACC 57.030 36.000 0.00 0.00 33.85 2.73
1568 1621 7.508687 AGTGATTATTACTGCACATCATACCA 58.491 34.615 0.00 0.00 33.85 3.25
1569 1622 7.992608 AGTGATTATTACTGCACATCATACCAA 59.007 33.333 0.00 0.00 33.85 3.67
1570 1623 8.285394 GTGATTATTACTGCACATCATACCAAG 58.715 37.037 0.00 0.00 0.00 3.61
1571 1624 8.210265 TGATTATTACTGCACATCATACCAAGA 58.790 33.333 0.00 0.00 0.00 3.02
1572 1625 7.786178 TTATTACTGCACATCATACCAAGAC 57.214 36.000 0.00 0.00 0.00 3.01
1573 1626 3.701205 ACTGCACATCATACCAAGACA 57.299 42.857 0.00 0.00 0.00 3.41
1574 1627 4.019792 ACTGCACATCATACCAAGACAA 57.980 40.909 0.00 0.00 0.00 3.18
1575 1628 4.005650 ACTGCACATCATACCAAGACAAG 58.994 43.478 0.00 0.00 0.00 3.16
1576 1629 2.749076 TGCACATCATACCAAGACAAGC 59.251 45.455 0.00 0.00 0.00 4.01
1577 1630 2.098117 GCACATCATACCAAGACAAGCC 59.902 50.000 0.00 0.00 0.00 4.35
1578 1631 2.352651 CACATCATACCAAGACAAGCCG 59.647 50.000 0.00 0.00 0.00 5.52
1579 1632 2.236146 ACATCATACCAAGACAAGCCGA 59.764 45.455 0.00 0.00 0.00 5.54
1580 1633 2.672961 TCATACCAAGACAAGCCGAG 57.327 50.000 0.00 0.00 0.00 4.63
1581 1634 2.176045 TCATACCAAGACAAGCCGAGA 58.824 47.619 0.00 0.00 0.00 4.04
1582 1635 2.166459 TCATACCAAGACAAGCCGAGAG 59.834 50.000 0.00 0.00 0.00 3.20
1583 1636 1.919240 TACCAAGACAAGCCGAGAGA 58.081 50.000 0.00 0.00 0.00 3.10
1584 1637 1.048601 ACCAAGACAAGCCGAGAGAA 58.951 50.000 0.00 0.00 0.00 2.87
1585 1638 1.270358 ACCAAGACAAGCCGAGAGAAC 60.270 52.381 0.00 0.00 0.00 3.01
1586 1639 1.433534 CAAGACAAGCCGAGAGAACC 58.566 55.000 0.00 0.00 0.00 3.62
1587 1640 1.048601 AAGACAAGCCGAGAGAACCA 58.951 50.000 0.00 0.00 0.00 3.67
1588 1641 1.048601 AGACAAGCCGAGAGAACCAA 58.951 50.000 0.00 0.00 0.00 3.67
1589 1642 1.416401 AGACAAGCCGAGAGAACCAAA 59.584 47.619 0.00 0.00 0.00 3.28
1590 1643 1.801178 GACAAGCCGAGAGAACCAAAG 59.199 52.381 0.00 0.00 0.00 2.77
1591 1644 0.519077 CAAGCCGAGAGAACCAAAGC 59.481 55.000 0.00 0.00 0.00 3.51
1592 1645 0.108585 AAGCCGAGAGAACCAAAGCA 59.891 50.000 0.00 0.00 0.00 3.91
1593 1646 0.321122 AGCCGAGAGAACCAAAGCAG 60.321 55.000 0.00 0.00 0.00 4.24
1594 1647 1.916697 GCCGAGAGAACCAAAGCAGC 61.917 60.000 0.00 0.00 0.00 5.25
1595 1648 1.301677 CCGAGAGAACCAAAGCAGCC 61.302 60.000 0.00 0.00 0.00 4.85
1596 1649 0.603707 CGAGAGAACCAAAGCAGCCA 60.604 55.000 0.00 0.00 0.00 4.75
1597 1650 1.831580 GAGAGAACCAAAGCAGCCAT 58.168 50.000 0.00 0.00 0.00 4.40
1598 1651 2.677902 CGAGAGAACCAAAGCAGCCATA 60.678 50.000 0.00 0.00 0.00 2.74
1599 1652 2.941720 GAGAGAACCAAAGCAGCCATAG 59.058 50.000 0.00 0.00 0.00 2.23
1600 1653 2.573462 AGAGAACCAAAGCAGCCATAGA 59.427 45.455 0.00 0.00 0.00 1.98
1601 1654 3.009473 AGAGAACCAAAGCAGCCATAGAA 59.991 43.478 0.00 0.00 0.00 2.10
1602 1655 3.950395 GAGAACCAAAGCAGCCATAGAAT 59.050 43.478 0.00 0.00 0.00 2.40
1603 1656 3.698040 AGAACCAAAGCAGCCATAGAATG 59.302 43.478 0.00 0.00 0.00 2.67
1616 1669 4.362470 CATAGAATGGAAGAGGGATGCA 57.638 45.455 0.00 0.00 0.00 3.96
1617 1670 2.725221 AGAATGGAAGAGGGATGCAC 57.275 50.000 0.00 0.00 0.00 4.57
1618 1671 1.213926 AGAATGGAAGAGGGATGCACC 59.786 52.381 0.00 0.00 38.08 5.01
1619 1672 1.002069 AATGGAAGAGGGATGCACCA 58.998 50.000 7.49 0.00 41.20 4.17
1620 1673 0.549950 ATGGAAGAGGGATGCACCAG 59.450 55.000 7.49 0.00 41.20 4.00
1621 1674 1.452833 GGAAGAGGGATGCACCAGC 60.453 63.158 7.49 0.00 41.20 4.85
1622 1675 1.606531 GAAGAGGGATGCACCAGCT 59.393 57.895 7.49 0.00 42.74 4.24
1623 1676 0.463474 GAAGAGGGATGCACCAGCTC 60.463 60.000 7.49 5.84 42.74 4.09
1624 1677 1.203441 AAGAGGGATGCACCAGCTCA 61.203 55.000 7.49 0.00 42.74 4.26
1625 1678 1.203441 AGAGGGATGCACCAGCTCAA 61.203 55.000 7.49 0.00 42.74 3.02
1626 1679 0.322816 GAGGGATGCACCAGCTCAAA 60.323 55.000 7.49 0.00 42.74 2.69
1627 1680 0.333993 AGGGATGCACCAGCTCAAAT 59.666 50.000 7.49 0.00 42.74 2.32
1628 1681 1.188863 GGGATGCACCAGCTCAAATT 58.811 50.000 7.49 0.00 42.74 1.82
1629 1682 2.025037 AGGGATGCACCAGCTCAAATTA 60.025 45.455 7.49 0.00 42.74 1.40
1630 1683 2.961062 GGGATGCACCAGCTCAAATTAT 59.039 45.455 7.49 0.00 42.74 1.28
1631 1684 4.141181 AGGGATGCACCAGCTCAAATTATA 60.141 41.667 7.49 0.00 42.74 0.98
1632 1685 4.584325 GGGATGCACCAGCTCAAATTATAA 59.416 41.667 7.49 0.00 42.74 0.98
1633 1686 5.244626 GGGATGCACCAGCTCAAATTATAAT 59.755 40.000 7.49 0.00 42.74 1.28
1634 1687 6.239402 GGGATGCACCAGCTCAAATTATAATT 60.239 38.462 4.81 4.81 42.74 1.40
1635 1688 7.039784 GGGATGCACCAGCTCAAATTATAATTA 60.040 37.037 11.07 0.00 42.74 1.40
1636 1689 8.526147 GGATGCACCAGCTCAAATTATAATTAT 58.474 33.333 11.07 2.97 42.74 1.28
1637 1690 9.565213 GATGCACCAGCTCAAATTATAATTATC 57.435 33.333 11.07 3.02 42.74 1.75
1638 1691 8.696043 TGCACCAGCTCAAATTATAATTATCT 57.304 30.769 11.07 3.98 42.74 1.98
1639 1692 8.786898 TGCACCAGCTCAAATTATAATTATCTC 58.213 33.333 11.07 2.58 42.74 2.75
1640 1693 8.786898 GCACCAGCTCAAATTATAATTATCTCA 58.213 33.333 11.07 0.00 37.91 3.27
1642 1695 9.289782 ACCAGCTCAAATTATAATTATCTCACC 57.710 33.333 11.07 0.00 0.00 4.02
1643 1696 9.512588 CCAGCTCAAATTATAATTATCTCACCT 57.487 33.333 11.07 0.41 0.00 4.00
1652 1705 9.664332 ATTATAATTATCTCACCTCAGATGCAC 57.336 33.333 0.00 0.00 34.75 4.57
1653 1706 5.363562 AATTATCTCACCTCAGATGCACA 57.636 39.130 0.00 0.00 34.75 4.57
1654 1707 5.563876 ATTATCTCACCTCAGATGCACAT 57.436 39.130 0.00 0.00 34.75 3.21
1655 1708 2.685850 TCTCACCTCAGATGCACATG 57.314 50.000 0.00 0.00 0.00 3.21
1656 1709 1.904537 TCTCACCTCAGATGCACATGT 59.095 47.619 0.00 0.00 0.00 3.21
1657 1710 2.303890 TCTCACCTCAGATGCACATGTT 59.696 45.455 0.00 0.00 0.00 2.71
1658 1711 3.079578 CTCACCTCAGATGCACATGTTT 58.920 45.455 0.00 0.00 0.00 2.83
1659 1712 3.489355 TCACCTCAGATGCACATGTTTT 58.511 40.909 0.00 0.00 0.00 2.43
1660 1713 3.503363 TCACCTCAGATGCACATGTTTTC 59.497 43.478 0.00 0.00 0.00 2.29
1661 1714 3.504906 CACCTCAGATGCACATGTTTTCT 59.495 43.478 0.00 0.00 0.00 2.52
1662 1715 4.696877 CACCTCAGATGCACATGTTTTCTA 59.303 41.667 0.00 0.00 0.00 2.10
1663 1716 4.697352 ACCTCAGATGCACATGTTTTCTAC 59.303 41.667 0.00 0.00 0.00 2.59
1664 1717 4.940046 CCTCAGATGCACATGTTTTCTACT 59.060 41.667 0.00 0.00 0.00 2.57
1665 1718 6.108687 CCTCAGATGCACATGTTTTCTACTA 58.891 40.000 0.00 0.00 0.00 1.82
1666 1719 6.257411 CCTCAGATGCACATGTTTTCTACTAG 59.743 42.308 0.00 0.00 0.00 2.57
1667 1720 6.108687 TCAGATGCACATGTTTTCTACTAGG 58.891 40.000 0.00 0.00 0.00 3.02
1668 1721 5.877012 CAGATGCACATGTTTTCTACTAGGT 59.123 40.000 0.00 0.00 0.00 3.08
1669 1722 6.372659 CAGATGCACATGTTTTCTACTAGGTT 59.627 38.462 0.00 0.00 0.00 3.50
1670 1723 6.942576 AGATGCACATGTTTTCTACTAGGTTT 59.057 34.615 0.00 0.00 0.00 3.27
1671 1724 8.100791 AGATGCACATGTTTTCTACTAGGTTTA 58.899 33.333 0.00 0.00 0.00 2.01
1672 1725 8.807948 ATGCACATGTTTTCTACTAGGTTTAT 57.192 30.769 0.00 0.00 0.00 1.40
1673 1726 8.630054 TGCACATGTTTTCTACTAGGTTTATT 57.370 30.769 0.00 0.00 0.00 1.40
1674 1727 9.073475 TGCACATGTTTTCTACTAGGTTTATTT 57.927 29.630 0.00 0.00 0.00 1.40
1682 1735 9.643693 TTTTCTACTAGGTTTATTTAGTCACGG 57.356 33.333 0.00 0.00 32.64 4.94
1978 2031 3.181445 ACATTCAACTGTTAGGTGAGCCA 60.181 43.478 0.00 0.00 43.74 4.75
2003 2057 5.540911 ACATTTTTCGATGGAACTTGCATT 58.459 33.333 0.00 0.00 0.00 3.56
2174 2229 2.288579 ACAATCTGGCACGACGAAACTA 60.289 45.455 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.703416 TGATAAAGCAGGCTGTGACAG 58.297 47.619 17.16 8.52 34.12 3.51
45 46 1.839424 ACACCCTTGATAAAGCAGGC 58.161 50.000 0.00 0.00 0.00 4.85
48 49 3.826524 TGTCAACACCCTTGATAAAGCA 58.173 40.909 0.00 0.00 0.00 3.91
149 150 3.069443 GTCCCTTGGAAGTGCATTTGAAA 59.931 43.478 0.00 0.00 31.38 2.69
175 176 7.886338 TGCTTATATTGAGTAGACGATCATGT 58.114 34.615 0.00 0.00 0.00 3.21
177 178 9.197694 GTTTGCTTATATTGAGTAGACGATCAT 57.802 33.333 0.00 0.00 0.00 2.45
249 250 0.682209 ATGCACAGGATGGTCTTGGC 60.682 55.000 0.00 0.00 43.62 4.52
269 315 4.058817 AGCAGCAAATAACCGATAGCTAC 58.941 43.478 0.00 0.00 30.24 3.58
294 340 2.276732 AAGCATACCACACAGCAGTT 57.723 45.000 0.00 0.00 0.00 3.16
299 345 6.200097 GGTTGTTTTAAAAGCATACCACACAG 59.800 38.462 0.00 0.00 0.00 3.66
464 510 3.061295 CGATACGCACAGGATTATCATGC 59.939 47.826 6.78 6.09 30.14 4.06
609 661 2.361737 GCCTGGCCCTTTCCTCAC 60.362 66.667 7.66 0.00 0.00 3.51
610 662 3.661648 GGCCTGGCCCTTTCCTCA 61.662 66.667 27.77 0.00 44.06 3.86
627 679 0.176449 TGATCTGTCGCCATCCAGTG 59.824 55.000 0.00 0.00 0.00 3.66
628 680 0.904649 TTGATCTGTCGCCATCCAGT 59.095 50.000 0.00 0.00 0.00 4.00
629 681 1.667724 GTTTGATCTGTCGCCATCCAG 59.332 52.381 0.00 0.00 0.00 3.86
630 682 1.003003 TGTTTGATCTGTCGCCATCCA 59.997 47.619 0.00 0.00 0.00 3.41
631 683 1.667724 CTGTTTGATCTGTCGCCATCC 59.332 52.381 0.00 0.00 0.00 3.51
632 684 1.063174 GCTGTTTGATCTGTCGCCATC 59.937 52.381 0.00 0.00 0.00 3.51
633 685 1.089920 GCTGTTTGATCTGTCGCCAT 58.910 50.000 0.00 0.00 0.00 4.40
634 686 0.035317 AGCTGTTTGATCTGTCGCCA 59.965 50.000 0.00 0.00 0.00 5.69
635 687 0.723981 GAGCTGTTTGATCTGTCGCC 59.276 55.000 0.00 0.00 0.00 5.54
636 688 1.658095 GAGAGCTGTTTGATCTGTCGC 59.342 52.381 0.00 0.00 42.10 5.19
637 689 1.916651 CGAGAGCTGTTTGATCTGTCG 59.083 52.381 0.00 0.00 42.10 4.35
638 690 3.178267 CTCGAGAGCTGTTTGATCTGTC 58.822 50.000 6.58 0.00 42.10 3.51
639 691 2.094286 CCTCGAGAGCTGTTTGATCTGT 60.094 50.000 15.71 0.00 42.10 3.41
640 692 2.538437 CCTCGAGAGCTGTTTGATCTG 58.462 52.381 15.71 0.00 42.10 2.90
641 693 1.134848 GCCTCGAGAGCTGTTTGATCT 60.135 52.381 15.71 0.00 45.10 2.75
642 694 1.285578 GCCTCGAGAGCTGTTTGATC 58.714 55.000 15.71 0.00 0.00 2.92
643 695 0.459237 CGCCTCGAGAGCTGTTTGAT 60.459 55.000 15.71 0.00 0.00 2.57
644 696 1.080501 CGCCTCGAGAGCTGTTTGA 60.081 57.895 15.71 0.00 0.00 2.69
645 697 2.097038 CCGCCTCGAGAGCTGTTTG 61.097 63.158 15.71 2.73 0.00 2.93
646 698 2.262915 CCGCCTCGAGAGCTGTTT 59.737 61.111 15.71 0.00 0.00 2.83
647 699 4.443266 GCCGCCTCGAGAGCTGTT 62.443 66.667 15.71 0.00 0.00 3.16
649 701 4.869440 CTGCCGCCTCGAGAGCTG 62.869 72.222 15.71 12.86 0.00 4.24
651 703 3.839642 GATCTGCCGCCTCGAGAGC 62.840 68.421 15.71 14.59 0.00 4.09
652 704 2.128853 GAGATCTGCCGCCTCGAGAG 62.129 65.000 15.71 7.47 0.00 3.20
653 705 2.124109 AGATCTGCCGCCTCGAGA 60.124 61.111 15.71 0.00 0.00 4.04
654 706 2.192861 AGAGATCTGCCGCCTCGAG 61.193 63.158 5.13 5.13 32.52 4.04
655 707 2.124109 AGAGATCTGCCGCCTCGA 60.124 61.111 0.00 0.00 32.52 4.04
656 708 2.027314 CAGAGATCTGCCGCCTCG 59.973 66.667 0.00 0.00 37.15 4.63
657 709 2.420890 CCAGAGATCTGCCGCCTC 59.579 66.667 0.00 0.00 42.47 4.70
658 710 3.859414 GCCAGAGATCTGCCGCCT 61.859 66.667 0.00 0.00 42.47 5.52
659 711 4.925861 GGCCAGAGATCTGCCGCC 62.926 72.222 12.46 12.46 41.62 6.13
662 714 2.107953 GTCGGCCAGAGATCTGCC 59.892 66.667 11.66 11.66 42.47 4.85
663 715 2.279120 CGTCGGCCAGAGATCTGC 60.279 66.667 0.00 0.00 42.47 4.26
664 716 2.415010 CCGTCGGCCAGAGATCTG 59.585 66.667 0.00 2.72 43.40 2.90
665 717 2.280404 TACCCGTCGGCCAGAGATCT 62.280 60.000 5.50 0.00 0.00 2.75
666 718 1.797211 CTACCCGTCGGCCAGAGATC 61.797 65.000 5.50 0.00 0.00 2.75
667 719 1.828660 CTACCCGTCGGCCAGAGAT 60.829 63.158 5.50 0.00 0.00 2.75
668 720 2.439701 CTACCCGTCGGCCAGAGA 60.440 66.667 5.50 0.00 0.00 3.10
669 721 2.754658 ACTACCCGTCGGCCAGAG 60.755 66.667 5.50 2.15 0.00 3.35
670 722 3.066190 CACTACCCGTCGGCCAGA 61.066 66.667 5.50 0.00 0.00 3.86
671 723 3.352338 GACACTACCCGTCGGCCAG 62.352 68.421 5.50 7.28 0.00 4.85
672 724 3.376078 GACACTACCCGTCGGCCA 61.376 66.667 5.50 0.00 0.00 5.36
673 725 3.376078 TGACACTACCCGTCGGCC 61.376 66.667 5.50 0.00 36.11 6.13
674 726 2.126189 GTGACACTACCCGTCGGC 60.126 66.667 5.50 0.00 36.11 5.54
675 727 2.570181 GGTGACACTACCCGTCGG 59.430 66.667 3.60 3.60 36.11 4.79
681 733 6.263617 TCAAATTTTACAAGGGTGACACTACC 59.736 38.462 5.39 0.00 40.10 3.18
682 734 7.266922 TCAAATTTTACAAGGGTGACACTAC 57.733 36.000 5.39 0.00 0.00 2.73
683 735 7.883391 TTCAAATTTTACAAGGGTGACACTA 57.117 32.000 5.39 0.00 0.00 2.74
684 736 6.783708 TTCAAATTTTACAAGGGTGACACT 57.216 33.333 5.39 0.00 0.00 3.55
685 737 9.535878 TTTATTCAAATTTTACAAGGGTGACAC 57.464 29.630 0.00 0.00 0.00 3.67
710 762 6.088137 TGGGTTTTCATATCCTTCCCTTTTT 58.912 36.000 0.00 0.00 35.00 1.94
711 763 5.660533 TGGGTTTTCATATCCTTCCCTTTT 58.339 37.500 0.00 0.00 35.00 2.27
712 764 5.283876 TGGGTTTTCATATCCTTCCCTTT 57.716 39.130 0.00 0.00 35.00 3.11
713 765 4.965283 TGGGTTTTCATATCCTTCCCTT 57.035 40.909 0.00 0.00 35.00 3.95
714 766 6.803587 ATATGGGTTTTCATATCCTTCCCT 57.196 37.500 0.00 0.00 36.00 4.20
715 767 7.730332 AGAAATATGGGTTTTCATATCCTTCCC 59.270 37.037 0.00 0.00 38.85 3.97
716 768 8.579863 CAGAAATATGGGTTTTCATATCCTTCC 58.420 37.037 0.00 0.00 38.85 3.46
717 769 9.354673 TCAGAAATATGGGTTTTCATATCCTTC 57.645 33.333 0.00 0.00 38.85 3.46
718 770 9.359653 CTCAGAAATATGGGTTTTCATATCCTT 57.640 33.333 0.00 0.00 38.85 3.36
719 771 7.946776 CCTCAGAAATATGGGTTTTCATATCCT 59.053 37.037 0.00 0.00 38.85 3.24
720 772 7.944554 TCCTCAGAAATATGGGTTTTCATATCC 59.055 37.037 0.00 0.00 38.85 2.59
721 773 8.787852 GTCCTCAGAAATATGGGTTTTCATATC 58.212 37.037 0.00 0.00 38.85 1.63
722 774 7.445402 CGTCCTCAGAAATATGGGTTTTCATAT 59.555 37.037 0.00 0.00 40.80 1.78
723 775 6.765989 CGTCCTCAGAAATATGGGTTTTCATA 59.234 38.462 0.00 0.00 35.90 2.15
724 776 5.590259 CGTCCTCAGAAATATGGGTTTTCAT 59.410 40.000 0.00 0.00 35.90 2.57
725 777 4.941263 CGTCCTCAGAAATATGGGTTTTCA 59.059 41.667 0.00 0.00 35.90 2.69
726 778 4.335594 CCGTCCTCAGAAATATGGGTTTTC 59.664 45.833 0.00 0.00 34.08 2.29
727 779 4.018779 TCCGTCCTCAGAAATATGGGTTTT 60.019 41.667 0.00 0.00 0.00 2.43
728 780 3.521937 TCCGTCCTCAGAAATATGGGTTT 59.478 43.478 0.00 0.00 0.00 3.27
729 781 3.112263 TCCGTCCTCAGAAATATGGGTT 58.888 45.455 0.00 0.00 0.00 4.11
730 782 2.700897 CTCCGTCCTCAGAAATATGGGT 59.299 50.000 0.00 0.00 0.00 4.51
731 783 2.700897 ACTCCGTCCTCAGAAATATGGG 59.299 50.000 0.00 0.00 0.00 4.00
732 784 3.384789 TGACTCCGTCCTCAGAAATATGG 59.615 47.826 0.00 0.00 0.00 2.74
733 785 4.655762 TGACTCCGTCCTCAGAAATATG 57.344 45.455 0.00 0.00 0.00 1.78
734 786 5.878406 ATTGACTCCGTCCTCAGAAATAT 57.122 39.130 0.00 0.00 0.00 1.28
735 787 6.605995 TCTTATTGACTCCGTCCTCAGAAATA 59.394 38.462 0.00 0.00 0.00 1.40
736 788 5.422331 TCTTATTGACTCCGTCCTCAGAAAT 59.578 40.000 0.00 0.00 0.00 2.17
737 789 4.770531 TCTTATTGACTCCGTCCTCAGAAA 59.229 41.667 0.00 0.00 0.00 2.52
738 790 4.341487 TCTTATTGACTCCGTCCTCAGAA 58.659 43.478 0.00 0.00 0.00 3.02
739 791 3.964411 TCTTATTGACTCCGTCCTCAGA 58.036 45.455 0.00 0.00 0.00 3.27
740 792 4.425520 GTTCTTATTGACTCCGTCCTCAG 58.574 47.826 0.00 0.00 0.00 3.35
741 793 3.119602 CGTTCTTATTGACTCCGTCCTCA 60.120 47.826 0.00 0.00 0.00 3.86
742 794 3.128242 TCGTTCTTATTGACTCCGTCCTC 59.872 47.826 0.00 0.00 0.00 3.71
743 795 3.087031 TCGTTCTTATTGACTCCGTCCT 58.913 45.455 0.00 0.00 0.00 3.85
744 796 3.498927 TCGTTCTTATTGACTCCGTCC 57.501 47.619 0.00 0.00 0.00 4.79
745 797 3.300066 CGTTCGTTCTTATTGACTCCGTC 59.700 47.826 0.00 0.00 0.00 4.79
746 798 3.240069 CGTTCGTTCTTATTGACTCCGT 58.760 45.455 0.00 0.00 0.00 4.69
747 799 3.240069 ACGTTCGTTCTTATTGACTCCG 58.760 45.455 0.00 0.00 0.00 4.63
748 800 5.050567 ACAAACGTTCGTTCTTATTGACTCC 60.051 40.000 10.90 0.00 0.00 3.85
749 801 5.970879 ACAAACGTTCGTTCTTATTGACTC 58.029 37.500 10.90 0.00 0.00 3.36
750 802 5.050567 GGACAAACGTTCGTTCTTATTGACT 60.051 40.000 10.90 0.00 0.00 3.41
751 803 5.135330 GGACAAACGTTCGTTCTTATTGAC 58.865 41.667 10.90 6.00 0.00 3.18
752 804 4.211794 GGGACAAACGTTCGTTCTTATTGA 59.788 41.667 10.90 0.00 0.00 2.57
753 805 4.460505 GGGACAAACGTTCGTTCTTATTG 58.539 43.478 10.90 7.86 0.00 1.90
754 806 3.184986 CGGGACAAACGTTCGTTCTTATT 59.815 43.478 10.90 0.00 0.00 1.40
755 807 2.733026 CGGGACAAACGTTCGTTCTTAT 59.267 45.455 10.90 0.00 0.00 1.73
756 808 2.126467 CGGGACAAACGTTCGTTCTTA 58.874 47.619 10.90 0.00 0.00 2.10
757 809 0.932399 CGGGACAAACGTTCGTTCTT 59.068 50.000 10.90 1.58 0.00 2.52
758 810 1.493134 GCGGGACAAACGTTCGTTCT 61.493 55.000 10.90 0.11 0.00 3.01
759 811 1.083209 GCGGGACAAACGTTCGTTC 60.083 57.895 10.90 0.00 0.00 3.95
760 812 2.536673 GGCGGGACAAACGTTCGTT 61.537 57.895 0.00 4.72 0.00 3.85
761 813 2.968697 GGCGGGACAAACGTTCGT 60.969 61.111 0.00 0.00 0.00 3.85
762 814 2.950172 CTGGCGGGACAAACGTTCG 61.950 63.158 0.00 0.94 0.00 3.95
763 815 2.943653 CTGGCGGGACAAACGTTC 59.056 61.111 0.00 0.00 0.00 3.95
764 816 3.284449 GCTGGCGGGACAAACGTT 61.284 61.111 0.00 0.00 0.00 3.99
775 827 4.767255 AGCTCCTTTCCGCTGGCG 62.767 66.667 8.08 8.08 34.69 5.69
776 828 2.360475 AAGCTCCTTTCCGCTGGC 60.360 61.111 0.00 0.00 36.45 4.85
777 829 2.694760 GCAAGCTCCTTTCCGCTGG 61.695 63.158 0.00 0.00 36.45 4.85
778 830 2.694760 GGCAAGCTCCTTTCCGCTG 61.695 63.158 0.00 0.00 36.45 5.18
779 831 2.360475 GGCAAGCTCCTTTCCGCT 60.360 61.111 0.00 0.00 38.30 5.52
780 832 3.804193 CGGCAAGCTCCTTTCCGC 61.804 66.667 3.35 0.00 42.29 5.54
782 834 0.036294 AGTACGGCAAGCTCCTTTCC 60.036 55.000 0.00 0.00 0.00 3.13
783 835 1.809684 AAGTACGGCAAGCTCCTTTC 58.190 50.000 0.00 0.00 0.00 2.62
784 836 3.412237 TTAAGTACGGCAAGCTCCTTT 57.588 42.857 0.00 0.00 0.00 3.11
785 837 3.412237 TTTAAGTACGGCAAGCTCCTT 57.588 42.857 0.00 0.00 0.00 3.36
786 838 3.629142 ATTTAAGTACGGCAAGCTCCT 57.371 42.857 0.00 0.00 0.00 3.69
787 839 4.659088 GAAATTTAAGTACGGCAAGCTCC 58.341 43.478 0.00 0.00 0.00 4.70
788 840 4.142966 ACGAAATTTAAGTACGGCAAGCTC 60.143 41.667 0.00 0.00 0.00 4.09
789 841 3.749609 ACGAAATTTAAGTACGGCAAGCT 59.250 39.130 0.00 0.00 0.00 3.74
790 842 4.074466 ACGAAATTTAAGTACGGCAAGC 57.926 40.909 0.00 0.00 0.00 4.01
791 843 5.566395 GGAAACGAAATTTAAGTACGGCAAG 59.434 40.000 0.00 0.00 0.00 4.01
792 844 5.239087 AGGAAACGAAATTTAAGTACGGCAA 59.761 36.000 0.00 0.00 0.00 4.52
793 845 4.756135 AGGAAACGAAATTTAAGTACGGCA 59.244 37.500 0.00 0.00 0.00 5.69
794 846 5.121298 AGAGGAAACGAAATTTAAGTACGGC 59.879 40.000 0.00 0.00 0.00 5.68
795 847 6.716898 AGAGGAAACGAAATTTAAGTACGG 57.283 37.500 0.00 0.00 0.00 4.02
796 848 7.117379 AGGAAGAGGAAACGAAATTTAAGTACG 59.883 37.037 0.00 0.00 0.00 3.67
797 849 8.320396 AGGAAGAGGAAACGAAATTTAAGTAC 57.680 34.615 0.00 0.00 0.00 2.73
798 850 8.780249 CAAGGAAGAGGAAACGAAATTTAAGTA 58.220 33.333 0.00 0.00 0.00 2.24
799 851 7.284716 ACAAGGAAGAGGAAACGAAATTTAAGT 59.715 33.333 0.00 0.00 0.00 2.24
800 852 7.649057 ACAAGGAAGAGGAAACGAAATTTAAG 58.351 34.615 0.00 0.00 0.00 1.85
801 853 7.255346 GGACAAGGAAGAGGAAACGAAATTTAA 60.255 37.037 0.00 0.00 0.00 1.52
802 854 6.206048 GGACAAGGAAGAGGAAACGAAATTTA 59.794 38.462 0.00 0.00 0.00 1.40
803 855 5.009710 GGACAAGGAAGAGGAAACGAAATTT 59.990 40.000 0.00 0.00 0.00 1.82
804 856 4.519350 GGACAAGGAAGAGGAAACGAAATT 59.481 41.667 0.00 0.00 0.00 1.82
805 857 4.072839 GGACAAGGAAGAGGAAACGAAAT 58.927 43.478 0.00 0.00 0.00 2.17
806 858 3.118186 TGGACAAGGAAGAGGAAACGAAA 60.118 43.478 0.00 0.00 0.00 3.46
807 859 2.436542 TGGACAAGGAAGAGGAAACGAA 59.563 45.455 0.00 0.00 0.00 3.85
808 860 2.043992 TGGACAAGGAAGAGGAAACGA 58.956 47.619 0.00 0.00 0.00 3.85
809 861 2.543777 TGGACAAGGAAGAGGAAACG 57.456 50.000 0.00 0.00 0.00 3.60
810 862 3.821748 AGTTGGACAAGGAAGAGGAAAC 58.178 45.455 0.00 0.00 0.00 2.78
811 863 4.080015 TCAAGTTGGACAAGGAAGAGGAAA 60.080 41.667 2.34 0.00 0.00 3.13
812 864 3.458118 TCAAGTTGGACAAGGAAGAGGAA 59.542 43.478 2.34 0.00 0.00 3.36
813 865 3.045634 TCAAGTTGGACAAGGAAGAGGA 58.954 45.455 2.34 0.00 0.00 3.71
814 866 3.071602 TCTCAAGTTGGACAAGGAAGAGG 59.928 47.826 2.34 0.00 0.00 3.69
815 867 4.039730 TCTCTCAAGTTGGACAAGGAAGAG 59.960 45.833 2.34 5.44 0.00 2.85
816 868 3.967326 TCTCTCAAGTTGGACAAGGAAGA 59.033 43.478 2.34 0.00 0.00 2.87
817 869 4.342862 TCTCTCAAGTTGGACAAGGAAG 57.657 45.455 2.34 0.00 0.00 3.46
818 870 4.594920 AGATCTCTCAAGTTGGACAAGGAA 59.405 41.667 2.34 0.00 0.00 3.36
819 871 4.020751 CAGATCTCTCAAGTTGGACAAGGA 60.021 45.833 2.34 0.00 0.00 3.36
820 872 4.252073 CAGATCTCTCAAGTTGGACAAGG 58.748 47.826 2.34 0.00 0.00 3.61
821 873 4.892433 ACAGATCTCTCAAGTTGGACAAG 58.108 43.478 2.34 0.00 0.00 3.16
822 874 4.590647 AGACAGATCTCTCAAGTTGGACAA 59.409 41.667 2.34 0.00 0.00 3.18
823 875 4.021632 CAGACAGATCTCTCAAGTTGGACA 60.022 45.833 2.34 0.00 30.42 4.02
824 876 4.021544 ACAGACAGATCTCTCAAGTTGGAC 60.022 45.833 2.34 0.00 30.42 4.02
825 877 4.155709 ACAGACAGATCTCTCAAGTTGGA 58.844 43.478 2.34 0.00 30.42 3.53
826 878 4.533919 ACAGACAGATCTCTCAAGTTGG 57.466 45.455 2.34 0.00 30.42 3.77
827 879 6.266168 AGTACAGACAGATCTCTCAAGTTG 57.734 41.667 0.56 0.00 30.42 3.16
828 880 5.417580 GGAGTACAGACAGATCTCTCAAGTT 59.582 44.000 0.56 0.00 30.42 2.66
829 881 4.947388 GGAGTACAGACAGATCTCTCAAGT 59.053 45.833 0.56 1.77 30.42 3.16
830 882 4.035091 CGGAGTACAGACAGATCTCTCAAG 59.965 50.000 0.56 0.00 30.42 3.02
831 883 3.942115 CGGAGTACAGACAGATCTCTCAA 59.058 47.826 0.56 0.00 30.42 3.02
832 884 3.055021 ACGGAGTACAGACAGATCTCTCA 60.055 47.826 0.56 0.00 41.94 3.27
833 885 3.537580 ACGGAGTACAGACAGATCTCTC 58.462 50.000 0.00 0.00 41.94 3.20
834 886 3.637911 ACGGAGTACAGACAGATCTCT 57.362 47.619 0.00 0.00 41.94 3.10
845 897 8.970638 ACGGATTTGTTCTGTATACGGAGTACA 61.971 40.741 13.97 13.48 42.35 2.90
846 898 6.678900 ACGGATTTGTTCTGTATACGGAGTAC 60.679 42.308 13.97 11.20 42.35 2.73
847 899 5.357878 ACGGATTTGTTCTGTATACGGAGTA 59.642 40.000 13.97 5.37 42.35 2.59
848 900 4.159135 ACGGATTTGTTCTGTATACGGAGT 59.841 41.667 13.97 4.16 42.35 3.85
849 901 4.503007 CACGGATTTGTTCTGTATACGGAG 59.497 45.833 13.97 3.57 42.26 4.63
850 902 4.426416 CACGGATTTGTTCTGTATACGGA 58.574 43.478 10.47 10.47 42.26 4.69
851 903 3.000925 GCACGGATTTGTTCTGTATACGG 59.999 47.826 5.24 5.24 42.26 4.02
852 904 3.301579 CGCACGGATTTGTTCTGTATACG 60.302 47.826 0.00 0.00 42.26 3.06
853 905 3.000925 CCGCACGGATTTGTTCTGTATAC 59.999 47.826 2.01 0.00 42.26 1.47
854 906 3.119065 TCCGCACGGATTTGTTCTGTATA 60.119 43.478 7.89 0.00 42.26 1.47
855 907 2.006888 CCGCACGGATTTGTTCTGTAT 58.993 47.619 2.01 0.00 42.26 2.29
856 908 1.001068 TCCGCACGGATTTGTTCTGTA 59.999 47.619 7.89 0.00 42.26 2.74
857 909 0.250124 TCCGCACGGATTTGTTCTGT 60.250 50.000 7.89 0.00 45.16 3.41
858 910 2.539003 TCCGCACGGATTTGTTCTG 58.461 52.632 7.89 0.00 39.76 3.02
870 922 2.477863 GGATAATTTGCAGTGTCCGCAC 60.478 50.000 0.00 0.00 45.57 5.34
871 923 1.742831 GGATAATTTGCAGTGTCCGCA 59.257 47.619 0.00 0.00 37.68 5.69
872 924 2.017049 AGGATAATTTGCAGTGTCCGC 58.983 47.619 0.00 0.00 0.00 5.54
873 925 4.442706 ACTAGGATAATTTGCAGTGTCCG 58.557 43.478 0.00 0.00 0.00 4.79
874 926 8.368668 AGTATACTAGGATAATTTGCAGTGTCC 58.631 37.037 2.75 2.78 0.00 4.02
875 927 9.197694 CAGTATACTAGGATAATTTGCAGTGTC 57.802 37.037 4.74 0.00 0.00 3.67
876 928 8.705594 ACAGTATACTAGGATAATTTGCAGTGT 58.294 33.333 4.74 0.00 0.00 3.55
877 929 8.982685 CACAGTATACTAGGATAATTTGCAGTG 58.017 37.037 4.74 0.80 0.00 3.66
878 930 8.924303 TCACAGTATACTAGGATAATTTGCAGT 58.076 33.333 4.74 0.00 0.00 4.40
879 931 9.935241 ATCACAGTATACTAGGATAATTTGCAG 57.065 33.333 4.74 0.00 0.00 4.41
887 939 9.508642 CAGAGACAATCACAGTATACTAGGATA 57.491 37.037 15.17 0.00 0.00 2.59
888 940 8.001875 ACAGAGACAATCACAGTATACTAGGAT 58.998 37.037 4.74 8.64 0.00 3.24
889 941 7.347252 ACAGAGACAATCACAGTATACTAGGA 58.653 38.462 4.74 6.60 0.00 2.94
890 942 7.575414 ACAGAGACAATCACAGTATACTAGG 57.425 40.000 4.74 0.80 0.00 3.02
891 943 8.678199 TCAACAGAGACAATCACAGTATACTAG 58.322 37.037 4.74 1.59 0.00 2.57
892 944 8.459635 GTCAACAGAGACAATCACAGTATACTA 58.540 37.037 4.74 0.00 38.40 1.82
893 945 7.039714 TGTCAACAGAGACAATCACAGTATACT 60.040 37.037 0.00 0.00 44.92 2.12
894 946 7.090808 TGTCAACAGAGACAATCACAGTATAC 58.909 38.462 0.00 0.00 44.92 1.47
895 947 7.227049 TGTCAACAGAGACAATCACAGTATA 57.773 36.000 0.00 0.00 44.92 1.47
896 948 6.101650 TGTCAACAGAGACAATCACAGTAT 57.898 37.500 0.00 0.00 44.92 2.12
897 949 5.509670 CCTGTCAACAGAGACAATCACAGTA 60.510 44.000 11.70 0.00 46.90 2.74
898 950 4.375272 CTGTCAACAGAGACAATCACAGT 58.625 43.478 4.05 0.00 46.90 3.55
899 951 3.744942 CCTGTCAACAGAGACAATCACAG 59.255 47.826 11.70 0.00 46.90 3.66
900 952 3.494924 CCCTGTCAACAGAGACAATCACA 60.495 47.826 11.70 0.00 46.90 3.58
901 953 3.070018 CCCTGTCAACAGAGACAATCAC 58.930 50.000 11.70 0.00 46.90 3.06
902 954 2.972021 TCCCTGTCAACAGAGACAATCA 59.028 45.455 11.70 0.00 46.90 2.57
903 955 3.330267 GTCCCTGTCAACAGAGACAATC 58.670 50.000 16.98 0.00 46.76 2.67
904 956 3.409026 GTCCCTGTCAACAGAGACAAT 57.591 47.619 16.98 0.00 46.76 2.71
905 957 2.910688 GTCCCTGTCAACAGAGACAA 57.089 50.000 16.98 0.00 46.76 3.18
907 959 1.048601 TGGTCCCTGTCAACAGAGAC 58.951 55.000 14.41 14.41 46.80 3.36
908 960 2.030027 ATGGTCCCTGTCAACAGAGA 57.970 50.000 11.70 0.69 46.59 3.10
909 961 2.816087 CAAATGGTCCCTGTCAACAGAG 59.184 50.000 11.70 0.00 46.59 3.35
910 962 2.488891 CCAAATGGTCCCTGTCAACAGA 60.489 50.000 11.70 0.00 46.59 3.41
911 963 1.888512 CCAAATGGTCCCTGTCAACAG 59.111 52.381 3.08 3.08 43.40 3.16
912 964 1.993956 CCAAATGGTCCCTGTCAACA 58.006 50.000 0.00 0.00 0.00 3.33
936 988 6.522054 TGGGGTCTCGATTATTAGTCAAATC 58.478 40.000 0.00 0.00 0.00 2.17
937 989 6.494666 TGGGGTCTCGATTATTAGTCAAAT 57.505 37.500 0.00 0.00 0.00 2.32
938 990 5.943349 TGGGGTCTCGATTATTAGTCAAA 57.057 39.130 0.00 0.00 0.00 2.69
939 991 5.395990 GGTTGGGGTCTCGATTATTAGTCAA 60.396 44.000 0.00 0.00 0.00 3.18
940 992 4.100498 GGTTGGGGTCTCGATTATTAGTCA 59.900 45.833 0.00 0.00 0.00 3.41
941 993 4.502777 GGGTTGGGGTCTCGATTATTAGTC 60.503 50.000 0.00 0.00 0.00 2.59
942 994 3.390311 GGGTTGGGGTCTCGATTATTAGT 59.610 47.826 0.00 0.00 0.00 2.24
943 995 3.244457 GGGGTTGGGGTCTCGATTATTAG 60.244 52.174 0.00 0.00 0.00 1.73
944 996 2.707257 GGGGTTGGGGTCTCGATTATTA 59.293 50.000 0.00 0.00 0.00 0.98
945 997 1.493446 GGGGTTGGGGTCTCGATTATT 59.507 52.381 0.00 0.00 0.00 1.40
946 998 1.137697 GGGGTTGGGGTCTCGATTAT 58.862 55.000 0.00 0.00 0.00 1.28
947 999 0.252789 TGGGGTTGGGGTCTCGATTA 60.253 55.000 0.00 0.00 0.00 1.75
948 1000 0.919289 ATGGGGTTGGGGTCTCGATT 60.919 55.000 0.00 0.00 0.00 3.34
949 1001 1.307866 ATGGGGTTGGGGTCTCGAT 60.308 57.895 0.00 0.00 0.00 3.59
950 1002 1.993391 GATGGGGTTGGGGTCTCGA 60.993 63.158 0.00 0.00 0.00 4.04
951 1003 2.590092 GATGGGGTTGGGGTCTCG 59.410 66.667 0.00 0.00 0.00 4.04
978 1030 1.668793 TGTGGTGATGCTGACTGCG 60.669 57.895 0.00 0.00 46.63 5.18
992 1044 2.263741 GCTCTGTGGCAAGGTGTGG 61.264 63.158 0.00 0.00 0.00 4.17
1023 1075 1.598130 AGCGGTGGTTCAGTTGAGC 60.598 57.895 0.00 0.00 0.00 4.26
1027 1079 1.072331 AGATTCAGCGGTGGTTCAGTT 59.928 47.619 15.67 0.00 0.00 3.16
1032 1084 1.202758 TGTGAAGATTCAGCGGTGGTT 60.203 47.619 15.67 2.03 37.98 3.67
1038 1090 5.569059 GTGGTTAATTTGTGAAGATTCAGCG 59.431 40.000 0.00 0.00 37.98 5.18
1044 1096 7.004086 TCAGAAGGTGGTTAATTTGTGAAGAT 58.996 34.615 0.00 0.00 0.00 2.40
1065 1117 6.840780 TGTAGTGTGAGATGAAGATTCAGA 57.159 37.500 1.32 0.00 41.08 3.27
1087 1139 2.364324 AGAGCCATGCCATATGCTTTTG 59.636 45.455 0.00 0.00 42.00 2.44
1098 1150 2.191641 GGACAGGAGAGCCATGCC 59.808 66.667 0.00 0.00 36.29 4.40
1112 1164 2.609459 CCTAAACATCGATGCACAGGAC 59.391 50.000 25.11 0.00 0.00 3.85
1113 1165 2.499693 TCCTAAACATCGATGCACAGGA 59.500 45.455 26.53 26.53 32.19 3.86
1117 1169 3.435327 TGTTGTCCTAAACATCGATGCAC 59.565 43.478 25.11 12.10 37.82 4.57
1127 1179 4.201589 CGATCGTGTGATGTTGTCCTAAAC 60.202 45.833 7.03 0.00 34.09 2.01
1130 1182 2.750712 TCGATCGTGTGATGTTGTCCTA 59.249 45.455 15.94 0.00 34.09 2.94
1137 1189 1.476488 TGATGGTCGATCGTGTGATGT 59.524 47.619 15.94 0.00 34.09 3.06
1154 1206 4.040339 GGGGAAAGGTTGTGATTTGTTGAT 59.960 41.667 0.00 0.00 0.00 2.57
1155 1207 3.386402 GGGGAAAGGTTGTGATTTGTTGA 59.614 43.478 0.00 0.00 0.00 3.18
1156 1208 3.727726 GGGGAAAGGTTGTGATTTGTTG 58.272 45.455 0.00 0.00 0.00 3.33
1157 1209 2.364002 CGGGGAAAGGTTGTGATTTGTT 59.636 45.455 0.00 0.00 0.00 2.83
1158 1210 1.960689 CGGGGAAAGGTTGTGATTTGT 59.039 47.619 0.00 0.00 0.00 2.83
1159 1211 1.336795 GCGGGGAAAGGTTGTGATTTG 60.337 52.381 0.00 0.00 0.00 2.32
1160 1212 0.966179 GCGGGGAAAGGTTGTGATTT 59.034 50.000 0.00 0.00 0.00 2.17
1161 1213 1.241315 CGCGGGGAAAGGTTGTGATT 61.241 55.000 0.00 0.00 0.00 2.57
1162 1214 1.674322 CGCGGGGAAAGGTTGTGAT 60.674 57.895 0.00 0.00 0.00 3.06
1163 1215 2.281208 CGCGGGGAAAGGTTGTGA 60.281 61.111 0.00 0.00 0.00 3.58
1164 1216 4.038080 GCGCGGGGAAAGGTTGTG 62.038 66.667 8.83 0.00 0.00 3.33
1165 1217 2.798148 CTAGCGCGGGGAAAGGTTGT 62.798 60.000 8.83 0.00 0.00 3.32
1166 1218 2.046700 TAGCGCGGGGAAAGGTTG 60.047 61.111 8.83 0.00 0.00 3.77
1167 1219 2.267961 CTAGCGCGGGGAAAGGTT 59.732 61.111 8.83 0.00 0.00 3.50
1168 1220 4.468689 GCTAGCGCGGGGAAAGGT 62.469 66.667 8.83 0.00 0.00 3.50
1169 1221 2.701163 CTAGCTAGCGCGGGGAAAGG 62.701 65.000 8.83 0.00 42.32 3.11
1170 1222 1.300233 CTAGCTAGCGCGGGGAAAG 60.300 63.158 8.83 0.00 42.32 2.62
1237 1289 2.184579 GGCCGTCTCCTTCCTTCG 59.815 66.667 0.00 0.00 0.00 3.79
1345 1398 4.899239 CACCCTCTCATCGCCGCC 62.899 72.222 0.00 0.00 0.00 6.13
1353 1406 4.007644 CGCACCAGCACCCTCTCA 62.008 66.667 0.00 0.00 42.27 3.27
1357 1410 4.101448 GATCCGCACCAGCACCCT 62.101 66.667 0.00 0.00 42.27 4.34
1371 1424 1.555741 GCTCCTTGAGCGCATCGATC 61.556 60.000 11.47 0.00 45.85 3.69
1423 1476 2.886124 GCCGTAGCCGAACTGCTC 60.886 66.667 0.00 0.00 41.68 4.26
1455 1508 0.811616 GTGCGTCACATGGGATCCTC 60.812 60.000 12.58 2.25 34.08 3.71
1464 1517 1.230635 GGAACTGCTGTGCGTCACAT 61.231 55.000 12.03 0.00 43.71 3.21
1467 1520 1.153269 TTGGAACTGCTGTGCGTCA 60.153 52.632 0.00 0.00 0.00 4.35
1496 1549 2.126228 CTTTGCTGCACATGGCCG 60.126 61.111 0.00 0.00 43.89 6.13
1497 1550 1.214589 CTCTTTGCTGCACATGGCC 59.785 57.895 0.00 0.00 43.89 5.36
1510 1563 1.035139 CCTGTGTGGCTTTGCTCTTT 58.965 50.000 0.00 0.00 0.00 2.52
1532 1585 9.375974 TGCAGTAATAATCACTACCTAATACCT 57.624 33.333 0.00 0.00 0.00 3.08
1533 1586 9.420551 GTGCAGTAATAATCACTACCTAATACC 57.579 37.037 0.00 0.00 0.00 2.73
1534 1587 9.976511 TGTGCAGTAATAATCACTACCTAATAC 57.023 33.333 0.00 0.00 0.00 1.89
1536 1589 9.712305 GATGTGCAGTAATAATCACTACCTAAT 57.288 33.333 0.00 0.00 0.00 1.73
1537 1590 8.700973 TGATGTGCAGTAATAATCACTACCTAA 58.299 33.333 0.00 0.00 0.00 2.69
1538 1591 8.245195 TGATGTGCAGTAATAATCACTACCTA 57.755 34.615 0.00 0.00 0.00 3.08
1539 1592 7.124573 TGATGTGCAGTAATAATCACTACCT 57.875 36.000 0.00 0.00 0.00 3.08
1540 1593 7.969536 ATGATGTGCAGTAATAATCACTACC 57.030 36.000 0.00 0.00 30.53 3.18
1541 1594 8.926710 GGTATGATGTGCAGTAATAATCACTAC 58.073 37.037 0.00 0.00 30.53 2.73
1542 1595 8.646900 TGGTATGATGTGCAGTAATAATCACTA 58.353 33.333 0.00 0.00 30.53 2.74
1543 1596 7.508687 TGGTATGATGTGCAGTAATAATCACT 58.491 34.615 0.00 0.00 30.53 3.41
1544 1597 7.728847 TGGTATGATGTGCAGTAATAATCAC 57.271 36.000 0.00 0.00 30.53 3.06
1545 1598 8.210265 TCTTGGTATGATGTGCAGTAATAATCA 58.790 33.333 0.00 0.00 0.00 2.57
1546 1599 8.499162 GTCTTGGTATGATGTGCAGTAATAATC 58.501 37.037 0.00 0.00 0.00 1.75
1547 1600 7.992608 TGTCTTGGTATGATGTGCAGTAATAAT 59.007 33.333 0.00 0.00 0.00 1.28
1548 1601 7.334858 TGTCTTGGTATGATGTGCAGTAATAA 58.665 34.615 0.00 0.00 0.00 1.40
1549 1602 6.883744 TGTCTTGGTATGATGTGCAGTAATA 58.116 36.000 0.00 0.00 0.00 0.98
1550 1603 5.744171 TGTCTTGGTATGATGTGCAGTAAT 58.256 37.500 0.00 0.00 0.00 1.89
1551 1604 5.159273 TGTCTTGGTATGATGTGCAGTAA 57.841 39.130 0.00 0.00 0.00 2.24
1552 1605 4.817318 TGTCTTGGTATGATGTGCAGTA 57.183 40.909 0.00 0.00 0.00 2.74
1553 1606 3.701205 TGTCTTGGTATGATGTGCAGT 57.299 42.857 0.00 0.00 0.00 4.40
1554 1607 3.181503 GCTTGTCTTGGTATGATGTGCAG 60.182 47.826 0.00 0.00 0.00 4.41
1555 1608 2.749076 GCTTGTCTTGGTATGATGTGCA 59.251 45.455 0.00 0.00 0.00 4.57
1556 1609 2.098117 GGCTTGTCTTGGTATGATGTGC 59.902 50.000 0.00 0.00 0.00 4.57
1557 1610 2.352651 CGGCTTGTCTTGGTATGATGTG 59.647 50.000 0.00 0.00 0.00 3.21
1558 1611 2.236146 TCGGCTTGTCTTGGTATGATGT 59.764 45.455 0.00 0.00 0.00 3.06
1559 1612 2.868583 CTCGGCTTGTCTTGGTATGATG 59.131 50.000 0.00 0.00 0.00 3.07
1560 1613 2.766263 TCTCGGCTTGTCTTGGTATGAT 59.234 45.455 0.00 0.00 0.00 2.45
1561 1614 2.166459 CTCTCGGCTTGTCTTGGTATGA 59.834 50.000 0.00 0.00 0.00 2.15
1562 1615 2.166459 TCTCTCGGCTTGTCTTGGTATG 59.834 50.000 0.00 0.00 0.00 2.39
1563 1616 2.457598 TCTCTCGGCTTGTCTTGGTAT 58.542 47.619 0.00 0.00 0.00 2.73
1564 1617 1.919240 TCTCTCGGCTTGTCTTGGTA 58.081 50.000 0.00 0.00 0.00 3.25
1565 1618 1.048601 TTCTCTCGGCTTGTCTTGGT 58.951 50.000 0.00 0.00 0.00 3.67
1566 1619 1.433534 GTTCTCTCGGCTTGTCTTGG 58.566 55.000 0.00 0.00 0.00 3.61
1567 1620 1.270305 TGGTTCTCTCGGCTTGTCTTG 60.270 52.381 0.00 0.00 0.00 3.02
1568 1621 1.048601 TGGTTCTCTCGGCTTGTCTT 58.951 50.000 0.00 0.00 0.00 3.01
1569 1622 1.048601 TTGGTTCTCTCGGCTTGTCT 58.951 50.000 0.00 0.00 0.00 3.41
1570 1623 1.801178 CTTTGGTTCTCTCGGCTTGTC 59.199 52.381 0.00 0.00 0.00 3.18
1571 1624 1.884235 CTTTGGTTCTCTCGGCTTGT 58.116 50.000 0.00 0.00 0.00 3.16
1572 1625 0.519077 GCTTTGGTTCTCTCGGCTTG 59.481 55.000 0.00 0.00 0.00 4.01
1573 1626 0.108585 TGCTTTGGTTCTCTCGGCTT 59.891 50.000 0.00 0.00 0.00 4.35
1574 1627 0.321122 CTGCTTTGGTTCTCTCGGCT 60.321 55.000 0.00 0.00 0.00 5.52
1575 1628 1.916697 GCTGCTTTGGTTCTCTCGGC 61.917 60.000 0.00 0.00 0.00 5.54
1576 1629 1.301677 GGCTGCTTTGGTTCTCTCGG 61.302 60.000 0.00 0.00 0.00 4.63
1577 1630 0.603707 TGGCTGCTTTGGTTCTCTCG 60.604 55.000 0.00 0.00 0.00 4.04
1578 1631 1.831580 ATGGCTGCTTTGGTTCTCTC 58.168 50.000 0.00 0.00 0.00 3.20
1579 1632 2.573462 TCTATGGCTGCTTTGGTTCTCT 59.427 45.455 0.00 0.00 0.00 3.10
1580 1633 2.991250 TCTATGGCTGCTTTGGTTCTC 58.009 47.619 0.00 0.00 0.00 2.87
1581 1634 3.439857 TTCTATGGCTGCTTTGGTTCT 57.560 42.857 0.00 0.00 0.00 3.01
1582 1635 3.181483 CCATTCTATGGCTGCTTTGGTTC 60.181 47.826 0.00 0.00 44.70 3.62
1583 1636 2.762327 CCATTCTATGGCTGCTTTGGTT 59.238 45.455 0.00 0.00 44.70 3.67
1584 1637 2.381911 CCATTCTATGGCTGCTTTGGT 58.618 47.619 0.00 0.00 44.70 3.67
1595 1648 4.070716 GTGCATCCCTCTTCCATTCTATG 58.929 47.826 0.00 0.00 0.00 2.23
1596 1649 3.073650 GGTGCATCCCTCTTCCATTCTAT 59.926 47.826 0.00 0.00 0.00 1.98
1597 1650 2.439507 GGTGCATCCCTCTTCCATTCTA 59.560 50.000 0.00 0.00 0.00 2.10
1598 1651 1.213926 GGTGCATCCCTCTTCCATTCT 59.786 52.381 0.00 0.00 0.00 2.40
1599 1652 1.064463 TGGTGCATCCCTCTTCCATTC 60.064 52.381 0.00 0.00 34.77 2.67
1600 1653 1.002069 TGGTGCATCCCTCTTCCATT 58.998 50.000 0.00 0.00 34.77 3.16
1601 1654 0.549950 CTGGTGCATCCCTCTTCCAT 59.450 55.000 0.00 0.00 34.77 3.41
1602 1655 1.993653 CTGGTGCATCCCTCTTCCA 59.006 57.895 0.00 0.00 34.77 3.53
1603 1656 1.452833 GCTGGTGCATCCCTCTTCC 60.453 63.158 0.00 0.00 39.41 3.46
1604 1657 0.463474 GAGCTGGTGCATCCCTCTTC 60.463 60.000 0.00 0.00 42.74 2.87
1605 1658 1.203441 TGAGCTGGTGCATCCCTCTT 61.203 55.000 13.79 0.00 42.74 2.85
1606 1659 1.203441 TTGAGCTGGTGCATCCCTCT 61.203 55.000 13.79 6.32 42.74 3.69
1607 1660 0.322816 TTTGAGCTGGTGCATCCCTC 60.323 55.000 7.57 7.57 42.74 4.30
1608 1661 0.333993 ATTTGAGCTGGTGCATCCCT 59.666 50.000 0.00 0.00 42.74 4.20
1609 1662 1.188863 AATTTGAGCTGGTGCATCCC 58.811 50.000 0.00 0.00 42.74 3.85
1610 1663 5.772825 TTATAATTTGAGCTGGTGCATCC 57.227 39.130 0.00 0.00 42.74 3.51
1611 1664 9.565213 GATAATTATAATTTGAGCTGGTGCATC 57.435 33.333 15.64 5.06 42.74 3.91
1612 1665 9.305555 AGATAATTATAATTTGAGCTGGTGCAT 57.694 29.630 15.64 0.00 42.74 3.96
1613 1666 8.696043 AGATAATTATAATTTGAGCTGGTGCA 57.304 30.769 15.64 0.00 42.74 4.57
1614 1667 8.786898 TGAGATAATTATAATTTGAGCTGGTGC 58.213 33.333 15.64 0.00 40.05 5.01
1616 1669 9.289782 GGTGAGATAATTATAATTTGAGCTGGT 57.710 33.333 15.64 0.00 0.00 4.00
1617 1670 9.512588 AGGTGAGATAATTATAATTTGAGCTGG 57.487 33.333 15.64 0.00 0.00 4.85
1626 1679 9.664332 GTGCATCTGAGGTGAGATAATTATAAT 57.336 33.333 0.00 0.00 31.14 1.28
1627 1680 8.650490 TGTGCATCTGAGGTGAGATAATTATAA 58.350 33.333 0.00 0.00 31.14 0.98
1628 1681 8.193953 TGTGCATCTGAGGTGAGATAATTATA 57.806 34.615 0.00 0.00 31.14 0.98
1629 1682 7.071069 TGTGCATCTGAGGTGAGATAATTAT 57.929 36.000 0.00 0.00 31.14 1.28
1630 1683 6.484364 TGTGCATCTGAGGTGAGATAATTA 57.516 37.500 0.00 0.00 31.14 1.40
1631 1684 5.363562 TGTGCATCTGAGGTGAGATAATT 57.636 39.130 0.00 0.00 31.14 1.40
1632 1685 5.163227 ACATGTGCATCTGAGGTGAGATAAT 60.163 40.000 0.00 0.00 31.14 1.28
1633 1686 4.162888 ACATGTGCATCTGAGGTGAGATAA 59.837 41.667 0.00 0.00 31.14 1.75
1634 1687 3.708121 ACATGTGCATCTGAGGTGAGATA 59.292 43.478 0.00 0.00 31.14 1.98
1635 1688 2.504585 ACATGTGCATCTGAGGTGAGAT 59.495 45.455 0.00 0.00 32.59 2.75
1636 1689 1.904537 ACATGTGCATCTGAGGTGAGA 59.095 47.619 0.00 0.00 0.00 3.27
1637 1690 2.398252 ACATGTGCATCTGAGGTGAG 57.602 50.000 0.00 0.00 0.00 3.51
1638 1691 2.865119 AACATGTGCATCTGAGGTGA 57.135 45.000 0.00 0.00 0.00 4.02
1639 1692 3.504906 AGAAAACATGTGCATCTGAGGTG 59.495 43.478 0.00 0.00 0.00 4.00
1640 1693 3.759581 AGAAAACATGTGCATCTGAGGT 58.240 40.909 0.00 0.00 0.00 3.85
1641 1694 4.940046 AGTAGAAAACATGTGCATCTGAGG 59.060 41.667 15.04 0.00 0.00 3.86
1642 1695 6.257411 CCTAGTAGAAAACATGTGCATCTGAG 59.743 42.308 15.04 10.49 0.00 3.35
1643 1696 6.108687 CCTAGTAGAAAACATGTGCATCTGA 58.891 40.000 15.04 3.95 0.00 3.27
1644 1697 5.877012 ACCTAGTAGAAAACATGTGCATCTG 59.123 40.000 15.04 0.00 0.00 2.90
1645 1698 6.054860 ACCTAGTAGAAAACATGTGCATCT 57.945 37.500 0.00 6.33 0.00 2.90
1646 1699 6.743575 AACCTAGTAGAAAACATGTGCATC 57.256 37.500 0.00 0.00 0.00 3.91
1647 1700 8.807948 ATAAACCTAGTAGAAAACATGTGCAT 57.192 30.769 0.00 0.00 0.00 3.96
1648 1701 8.630054 AATAAACCTAGTAGAAAACATGTGCA 57.370 30.769 0.00 0.00 0.00 4.57
1656 1709 9.643693 CCGTGACTAAATAAACCTAGTAGAAAA 57.356 33.333 0.00 0.00 0.00 2.29
1657 1710 9.023962 TCCGTGACTAAATAAACCTAGTAGAAA 57.976 33.333 0.00 0.00 0.00 2.52
1658 1711 8.579850 TCCGTGACTAAATAAACCTAGTAGAA 57.420 34.615 0.00 0.00 0.00 2.10
1659 1712 8.757982 ATCCGTGACTAAATAAACCTAGTAGA 57.242 34.615 0.00 0.00 0.00 2.59
1660 1713 9.813446 AAATCCGTGACTAAATAAACCTAGTAG 57.187 33.333 0.00 0.00 0.00 2.57
1661 1714 9.807649 GAAATCCGTGACTAAATAAACCTAGTA 57.192 33.333 0.00 0.00 0.00 1.82
1662 1715 8.537858 AGAAATCCGTGACTAAATAAACCTAGT 58.462 33.333 0.00 0.00 0.00 2.57
1663 1716 8.818057 CAGAAATCCGTGACTAAATAAACCTAG 58.182 37.037 0.00 0.00 0.00 3.02
1664 1717 7.767198 CCAGAAATCCGTGACTAAATAAACCTA 59.233 37.037 0.00 0.00 0.00 3.08
1665 1718 6.598064 CCAGAAATCCGTGACTAAATAAACCT 59.402 38.462 0.00 0.00 0.00 3.50
1666 1719 6.596497 TCCAGAAATCCGTGACTAAATAAACC 59.404 38.462 0.00 0.00 0.00 3.27
1667 1720 7.333672 ACTCCAGAAATCCGTGACTAAATAAAC 59.666 37.037 0.00 0.00 0.00 2.01
1668 1721 7.333423 CACTCCAGAAATCCGTGACTAAATAAA 59.667 37.037 0.00 0.00 0.00 1.40
1669 1722 6.816640 CACTCCAGAAATCCGTGACTAAATAA 59.183 38.462 0.00 0.00 0.00 1.40
1670 1723 6.338146 CACTCCAGAAATCCGTGACTAAATA 58.662 40.000 0.00 0.00 0.00 1.40
1671 1724 5.178797 CACTCCAGAAATCCGTGACTAAAT 58.821 41.667 0.00 0.00 0.00 1.40
1672 1725 4.562757 CCACTCCAGAAATCCGTGACTAAA 60.563 45.833 0.00 0.00 0.00 1.85
1673 1726 3.056107 CCACTCCAGAAATCCGTGACTAA 60.056 47.826 0.00 0.00 0.00 2.24
1674 1727 2.496070 CCACTCCAGAAATCCGTGACTA 59.504 50.000 0.00 0.00 0.00 2.59
1675 1728 1.276421 CCACTCCAGAAATCCGTGACT 59.724 52.381 0.00 0.00 0.00 3.41
1676 1729 1.002087 ACCACTCCAGAAATCCGTGAC 59.998 52.381 0.00 0.00 0.00 3.67
1677 1730 1.001974 CACCACTCCAGAAATCCGTGA 59.998 52.381 0.00 0.00 0.00 4.35
1678 1731 1.270839 ACACCACTCCAGAAATCCGTG 60.271 52.381 0.00 0.00 0.00 4.94
1679 1732 1.056660 ACACCACTCCAGAAATCCGT 58.943 50.000 0.00 0.00 0.00 4.69
1680 1733 1.001974 TCACACCACTCCAGAAATCCG 59.998 52.381 0.00 0.00 0.00 4.18
1681 1734 2.859165 TCACACCACTCCAGAAATCC 57.141 50.000 0.00 0.00 0.00 3.01
1682 1735 3.942829 TCATCACACCACTCCAGAAATC 58.057 45.455 0.00 0.00 0.00 2.17
1978 2031 4.278170 TGCAAGTTCCATCGAAAAATGTCT 59.722 37.500 0.00 0.00 0.00 3.41
2174 2229 2.165167 CACATGTCTTGGAACCATGCT 58.835 47.619 0.00 0.00 39.62 3.79
2579 2635 0.980754 AGGTCACACCGCCATCCATA 60.981 55.000 0.00 0.00 44.90 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.