Multiple sequence alignment - TraesCS6D01G059400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G059400 chr6D 100.000 4269 0 0 1 4269 27839325 27843593 0.000000e+00 7884.0
1 TraesCS6D01G059400 chr6D 94.289 823 42 5 2919 3739 27789601 27788782 0.000000e+00 1254.0
2 TraesCS6D01G059400 chr6D 86.988 1099 114 15 1626 2718 27792983 27791908 0.000000e+00 1210.0
3 TraesCS6D01G059400 chr6D 78.811 1430 232 48 979 2366 28411464 28410064 0.000000e+00 896.0
4 TraesCS6D01G059400 chr6D 86.052 803 62 22 787 1580 27815950 27815189 0.000000e+00 817.0
5 TraesCS6D01G059400 chr6D 76.553 1288 217 58 1020 2254 28305135 28303880 1.010000e-175 627.0
6 TraesCS6D01G059400 chr6D 90.365 301 27 2 404 703 464441686 464441387 1.110000e-105 394.0
7 TraesCS6D01G059400 chr6D 87.009 331 34 7 998 1325 27729354 27729678 8.720000e-97 364.0
8 TraesCS6D01G059400 chr6D 86.667 180 13 6 3814 3982 27788394 27788215 5.640000e-44 189.0
9 TraesCS6D01G059400 chr6D 83.969 131 13 3 2783 2905 27789932 27789802 7.500000e-23 119.0
10 TraesCS6D01G059400 chr6D 93.590 78 5 0 2722 2799 27791870 27791793 2.700000e-22 117.0
11 TraesCS6D01G059400 chr6D 81.818 132 24 0 1787 1918 28326636 28326505 1.250000e-20 111.0
12 TraesCS6D01G059400 chr6D 91.489 47 4 0 3737 3783 27788541 27788495 9.910000e-07 65.8
13 TraesCS6D01G059400 chr6A 89.989 3516 239 43 787 4267 30041867 30038430 0.000000e+00 4438.0
14 TraesCS6D01G059400 chr6A 91.822 2152 126 26 788 2905 30137231 30135096 0.000000e+00 2953.0
15 TraesCS6D01G059400 chr6A 93.761 1090 43 11 2905 3985 30135069 30133996 0.000000e+00 1613.0
16 TraesCS6D01G059400 chr6A 79.086 1444 229 46 973 2372 29495937 29497351 0.000000e+00 926.0
17 TraesCS6D01G059400 chr6A 89.524 210 11 4 3973 4178 30133589 30133387 5.480000e-64 255.0
18 TraesCS6D01G059400 chr6B 92.344 2351 124 17 787 3120 51611778 51614089 0.000000e+00 3293.0
19 TraesCS6D01G059400 chr6B 86.744 2150 191 45 787 2905 51577843 51575757 0.000000e+00 2305.0
20 TraesCS6D01G059400 chr6B 93.794 854 47 4 2905 3753 51575730 51574878 0.000000e+00 1279.0
21 TraesCS6D01G059400 chr6B 76.744 1290 230 49 1011 2254 51912405 51913670 0.000000e+00 656.0
22 TraesCS6D01G059400 chr6B 76.989 1282 212 54 1020 2252 52361263 52360016 0.000000e+00 656.0
23 TraesCS6D01G059400 chr6B 92.444 450 33 1 3334 3783 51614561 51615009 3.600000e-180 641.0
24 TraesCS6D01G059400 chr6B 93.970 199 12 0 3145 3343 51614201 51614399 6.940000e-78 302.0
25 TraesCS6D01G059400 chr6B 87.160 257 21 3 3814 4058 51574761 51574505 9.040000e-72 281.0
26 TraesCS6D01G059400 chr6B 87.500 248 13 4 2 237 51610878 51611119 1.960000e-68 270.0
27 TraesCS6D01G059400 chr6B 85.922 206 16 5 3856 4058 51654486 51654681 1.560000e-49 207.0
28 TraesCS6D01G059400 chr6B 79.747 237 33 11 2247 2474 426739491 426739261 1.590000e-34 158.0
29 TraesCS6D01G059400 chr6B 93.478 92 6 0 312 403 51611594 51611685 2.070000e-28 137.0
30 TraesCS6D01G059400 chrUn 78.661 1434 233 36 979 2366 286651833 286650427 0.000000e+00 885.0
31 TraesCS6D01G059400 chr2A 90.066 302 28 2 404 703 459017305 459017004 1.440000e-104 390.0
32 TraesCS6D01G059400 chr2A 88.997 309 31 3 402 707 434580266 434579958 3.120000e-101 379.0
33 TraesCS6D01G059400 chr2A 87.654 324 33 7 397 717 65239987 65240306 1.880000e-98 370.0
34 TraesCS6D01G059400 chr1D 89.389 311 31 2 397 705 318585934 318585624 1.440000e-104 390.0
35 TraesCS6D01G059400 chr5A 89.967 299 28 2 407 703 647359852 647359554 6.700000e-103 385.0
36 TraesCS6D01G059400 chr4D 88.571 315 33 3 394 706 20141641 20141328 3.120000e-101 379.0
37 TraesCS6D01G059400 chr4D 84.488 361 34 9 1 348 296589822 296589471 1.900000e-88 337.0
38 TraesCS6D01G059400 chr1B 88.997 309 30 4 402 706 12757152 12756844 3.120000e-101 379.0
39 TraesCS6D01G059400 chr3B 87.616 323 36 4 396 714 449806537 449806859 5.210000e-99 372.0
40 TraesCS6D01G059400 chr4A 81.513 238 29 12 2244 2472 720042523 720042754 9.430000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G059400 chr6D 27839325 27843593 4268 False 7884.000000 7884 100.000000 1 4269 1 chr6D.!!$F2 4268
1 TraesCS6D01G059400 chr6D 28410064 28411464 1400 True 896.000000 896 78.811000 979 2366 1 chr6D.!!$R4 1387
2 TraesCS6D01G059400 chr6D 27815189 27815950 761 True 817.000000 817 86.052000 787 1580 1 chr6D.!!$R1 793
3 TraesCS6D01G059400 chr6D 28303880 28305135 1255 True 627.000000 627 76.553000 1020 2254 1 chr6D.!!$R2 1234
4 TraesCS6D01G059400 chr6D 27788215 27792983 4768 True 492.466667 1254 89.498667 1626 3982 6 chr6D.!!$R6 2356
5 TraesCS6D01G059400 chr6A 30038430 30041867 3437 True 4438.000000 4438 89.989000 787 4267 1 chr6A.!!$R1 3480
6 TraesCS6D01G059400 chr6A 30133387 30137231 3844 True 1607.000000 2953 91.702333 788 4178 3 chr6A.!!$R2 3390
7 TraesCS6D01G059400 chr6A 29495937 29497351 1414 False 926.000000 926 79.086000 973 2372 1 chr6A.!!$F1 1399
8 TraesCS6D01G059400 chr6B 51574505 51577843 3338 True 1288.333333 2305 89.232667 787 4058 3 chr6B.!!$R3 3271
9 TraesCS6D01G059400 chr6B 51610878 51615009 4131 False 928.600000 3293 91.947200 2 3783 5 chr6B.!!$F3 3781
10 TraesCS6D01G059400 chr6B 51912405 51913670 1265 False 656.000000 656 76.744000 1011 2254 1 chr6B.!!$F2 1243
11 TraesCS6D01G059400 chr6B 52360016 52361263 1247 True 656.000000 656 76.989000 1020 2252 1 chr6B.!!$R1 1232
12 TraesCS6D01G059400 chrUn 286650427 286651833 1406 True 885.000000 885 78.661000 979 2366 1 chrUn.!!$R1 1387

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 1000 0.040246 GTCGATGACTAGGCGCCTAC 60.040 60.0 32.24 23.05 0.00 3.18 F
797 1266 0.040425 AGCGGTGACAAATGCGTTTC 60.040 50.0 0.00 0.00 0.00 2.78 F
858 1330 0.250295 CAGACATGGTGTTCGTGGGT 60.250 55.0 0.00 0.00 36.71 4.51 F
1437 1928 0.672401 GATTCGCTTGGTTCGGGACA 60.672 55.0 0.00 0.00 0.00 4.02 F
1861 2439 0.719465 CTGTAACGGTGTTCCATCGC 59.281 55.0 0.00 0.00 42.21 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1978 2556 0.036732 TGGACAGTGAAGATGGTGCC 59.963 55.000 0.00 0.0 0.00 5.01 R
2026 2604 1.877443 GTACCATTTGCTGTTGTCGGT 59.123 47.619 0.00 0.0 0.00 4.69 R
2342 2937 2.380064 TCCAACTTGGCCACAGAAAT 57.620 45.000 3.88 0.0 37.47 2.17 R
3239 6047 4.468510 ACCGGAACACAATTCTAGATACCA 59.531 41.667 9.46 0.0 0.00 3.25 R
3306 6114 6.039047 CCGATCTCCATGAGAAATTGTCAAAT 59.961 38.462 0.00 0.0 42.27 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.410400 GCGGTGGACTGGGGGAAG 62.410 72.222 0.00 0.00 0.00 3.46
44 45 1.896122 CGGTGGACTGGGGGAAGTAC 61.896 65.000 0.00 0.00 0.00 2.73
84 85 2.292267 CTCGCCCAAGATGTATTGCTT 58.708 47.619 0.00 0.00 0.00 3.91
101 102 6.896021 ATTGCTTGCTAAGATGCTCAATAT 57.104 33.333 0.00 0.00 31.86 1.28
102 103 6.704289 TTGCTTGCTAAGATGCTCAATATT 57.296 33.333 0.00 0.00 0.00 1.28
141 154 2.094906 GCGGTTCTTTTGAATGGTACCC 60.095 50.000 10.07 0.00 40.94 3.69
146 159 3.707316 TCTTTTGAATGGTACCCATGGG 58.293 45.455 30.23 30.23 44.40 4.00
199 212 7.228507 GGTCATGGTGATTATTTGTGTAGCATA 59.771 37.037 0.00 0.00 0.00 3.14
227 240 6.339730 TGGCTATGATTATTTGTGGCAAAAG 58.660 36.000 0.00 0.00 0.00 2.27
228 241 6.154192 TGGCTATGATTATTTGTGGCAAAAGA 59.846 34.615 0.00 0.00 0.00 2.52
256 696 3.179830 GCTGAAAGAATGCAAGCATGAG 58.820 45.455 8.50 0.31 36.68 2.90
263 703 2.061509 ATGCAAGCATGAGCCACATA 57.938 45.000 6.76 0.00 43.56 2.29
264 704 1.385528 TGCAAGCATGAGCCACATAG 58.614 50.000 0.00 0.00 43.56 2.23
266 706 2.228059 GCAAGCATGAGCCACATAGAT 58.772 47.619 0.00 0.00 43.56 1.98
269 709 4.801914 GCAAGCATGAGCCACATAGATAGA 60.802 45.833 0.00 0.00 43.56 1.98
270 710 5.303165 CAAGCATGAGCCACATAGATAGAA 58.697 41.667 0.00 0.00 43.56 2.10
271 711 5.557576 AGCATGAGCCACATAGATAGAAA 57.442 39.130 0.00 0.00 43.56 2.52
272 712 6.124316 AGCATGAGCCACATAGATAGAAAT 57.876 37.500 0.00 0.00 43.56 2.17
274 714 5.123502 GCATGAGCCACATAGATAGAAATGG 59.876 44.000 0.00 0.00 37.46 3.16
275 715 5.894298 TGAGCCACATAGATAGAAATGGT 57.106 39.130 0.00 0.00 0.00 3.55
276 716 6.994421 TGAGCCACATAGATAGAAATGGTA 57.006 37.500 0.00 0.00 0.00 3.25
277 717 6.997655 TGAGCCACATAGATAGAAATGGTAG 58.002 40.000 0.00 0.00 0.00 3.18
278 718 6.782494 TGAGCCACATAGATAGAAATGGTAGA 59.218 38.462 0.00 0.00 0.00 2.59
280 720 6.784969 AGCCACATAGATAGAAATGGTAGACT 59.215 38.462 0.00 0.00 0.00 3.24
281 721 7.039363 AGCCACATAGATAGAAATGGTAGACTC 60.039 40.741 0.00 0.00 0.00 3.36
282 722 7.255977 GCCACATAGATAGAAATGGTAGACTCA 60.256 40.741 0.00 0.00 0.00 3.41
283 723 8.303156 CCACATAGATAGAAATGGTAGACTCAG 58.697 40.741 0.00 0.00 0.00 3.35
284 724 7.812191 CACATAGATAGAAATGGTAGACTCAGC 59.188 40.741 0.00 0.00 0.00 4.26
285 725 5.799827 AGATAGAAATGGTAGACTCAGCC 57.200 43.478 0.00 0.00 0.00 4.85
286 726 5.463154 AGATAGAAATGGTAGACTCAGCCT 58.537 41.667 0.00 0.00 0.00 4.58
287 727 5.902431 AGATAGAAATGGTAGACTCAGCCTT 59.098 40.000 0.00 0.00 0.00 4.35
288 728 4.917906 AGAAATGGTAGACTCAGCCTTT 57.082 40.909 0.00 0.00 0.00 3.11
289 729 5.248380 AGAAATGGTAGACTCAGCCTTTT 57.752 39.130 0.00 0.00 33.96 2.27
290 730 5.635120 AGAAATGGTAGACTCAGCCTTTTT 58.365 37.500 0.00 0.00 32.24 1.94
291 731 6.779860 AGAAATGGTAGACTCAGCCTTTTTA 58.220 36.000 0.00 0.00 32.24 1.52
292 732 7.406104 AGAAATGGTAGACTCAGCCTTTTTAT 58.594 34.615 0.00 0.00 32.24 1.40
293 733 7.890655 AGAAATGGTAGACTCAGCCTTTTTATT 59.109 33.333 0.00 0.00 32.24 1.40
294 734 9.174166 GAAATGGTAGACTCAGCCTTTTTATTA 57.826 33.333 0.00 0.00 32.24 0.98
295 735 9.700831 AAATGGTAGACTCAGCCTTTTTATTAT 57.299 29.630 0.00 0.00 0.00 1.28
296 736 8.910351 ATGGTAGACTCAGCCTTTTTATTATC 57.090 34.615 0.00 0.00 0.00 1.75
297 737 7.280356 TGGTAGACTCAGCCTTTTTATTATCC 58.720 38.462 0.00 0.00 0.00 2.59
298 738 7.092623 TGGTAGACTCAGCCTTTTTATTATCCA 60.093 37.037 0.00 0.00 0.00 3.41
299 739 7.226918 GGTAGACTCAGCCTTTTTATTATCCAC 59.773 40.741 0.00 0.00 0.00 4.02
300 740 5.817816 AGACTCAGCCTTTTTATTATCCACG 59.182 40.000 0.00 0.00 0.00 4.94
301 741 4.881850 ACTCAGCCTTTTTATTATCCACGG 59.118 41.667 0.00 0.00 0.00 4.94
302 742 4.204012 TCAGCCTTTTTATTATCCACGGG 58.796 43.478 0.00 0.00 0.00 5.28
303 743 4.080243 TCAGCCTTTTTATTATCCACGGGA 60.080 41.667 0.00 0.00 35.55 5.14
304 744 4.827284 CAGCCTTTTTATTATCCACGGGAT 59.173 41.667 9.89 9.89 45.40 3.85
305 745 5.301805 CAGCCTTTTTATTATCCACGGGATT 59.698 40.000 10.21 0.00 39.79 3.01
306 746 5.301805 AGCCTTTTTATTATCCACGGGATTG 59.698 40.000 10.21 0.00 39.79 2.67
307 747 5.528870 CCTTTTTATTATCCACGGGATTGC 58.471 41.667 10.21 0.00 39.79 3.56
308 748 5.068460 CCTTTTTATTATCCACGGGATTGCA 59.932 40.000 10.21 0.00 39.79 4.08
309 749 6.239289 CCTTTTTATTATCCACGGGATTGCAT 60.239 38.462 10.21 4.70 39.79 3.96
310 750 5.957842 TTTATTATCCACGGGATTGCATC 57.042 39.130 10.21 0.00 39.79 3.91
313 753 1.392589 ATCCACGGGATTGCATCAAC 58.607 50.000 0.00 0.00 39.79 3.18
329 769 4.261322 GCATCAACAATGGAGATTACGCAT 60.261 41.667 0.00 0.00 35.77 4.73
334 774 5.947228 ACAATGGAGATTACGCATAATGG 57.053 39.130 0.00 0.00 30.77 3.16
345 785 8.099537 AGATTACGCATAATGGATCTGATTCTT 58.900 33.333 0.00 0.00 30.77 2.52
391 831 5.989477 ACTACCATCAAGCAGTGCTAATAA 58.011 37.500 20.09 4.55 38.25 1.40
392 832 5.817816 ACTACCATCAAGCAGTGCTAATAAC 59.182 40.000 20.09 0.00 38.25 1.89
393 833 4.588899 ACCATCAAGCAGTGCTAATAACA 58.411 39.130 20.09 0.00 38.25 2.41
394 834 5.009631 ACCATCAAGCAGTGCTAATAACAA 58.990 37.500 20.09 0.00 38.25 2.83
395 835 5.124457 ACCATCAAGCAGTGCTAATAACAAG 59.876 40.000 20.09 5.47 38.25 3.16
396 836 5.355071 CCATCAAGCAGTGCTAATAACAAGA 59.645 40.000 20.09 6.94 38.25 3.02
397 837 6.457934 CCATCAAGCAGTGCTAATAACAAGAG 60.458 42.308 20.09 1.96 38.25 2.85
398 838 4.393062 TCAAGCAGTGCTAATAACAAGAGC 59.607 41.667 20.09 0.00 38.25 4.09
399 839 4.213564 AGCAGTGCTAATAACAAGAGCT 57.786 40.909 18.11 0.00 36.99 4.09
400 840 5.344743 AGCAGTGCTAATAACAAGAGCTA 57.655 39.130 18.11 0.00 36.99 3.32
401 841 5.355596 AGCAGTGCTAATAACAAGAGCTAG 58.644 41.667 18.11 0.00 36.99 3.42
402 842 4.025313 GCAGTGCTAATAACAAGAGCTAGC 60.025 45.833 6.62 6.62 37.12 3.42
403 843 4.208047 CAGTGCTAATAACAAGAGCTAGCG 59.792 45.833 9.55 0.00 38.23 4.26
404 844 3.060205 GTGCTAATAACAAGAGCTAGCGC 60.060 47.826 10.88 10.88 38.23 5.92
405 845 2.154007 GCTAATAACAAGAGCTAGCGCG 59.846 50.000 13.04 0.00 42.32 6.86
406 846 2.579207 AATAACAAGAGCTAGCGCGA 57.421 45.000 12.10 0.00 42.32 5.87
407 847 2.579207 ATAACAAGAGCTAGCGCGAA 57.421 45.000 12.10 0.00 42.32 4.70
408 848 1.625616 TAACAAGAGCTAGCGCGAAC 58.374 50.000 12.10 0.00 42.32 3.95
409 849 1.014564 AACAAGAGCTAGCGCGAACC 61.015 55.000 12.10 0.00 42.32 3.62
410 850 1.446099 CAAGAGCTAGCGCGAACCA 60.446 57.895 12.10 0.00 42.32 3.67
411 851 1.014044 CAAGAGCTAGCGCGAACCAA 61.014 55.000 12.10 0.00 42.32 3.67
412 852 1.014564 AAGAGCTAGCGCGAACCAAC 61.015 55.000 12.10 0.00 42.32 3.77
413 853 2.434359 AGCTAGCGCGAACCAACC 60.434 61.111 12.10 0.00 42.32 3.77
414 854 2.434359 GCTAGCGCGAACCAACCT 60.434 61.111 12.10 0.00 0.00 3.50
415 855 2.740714 GCTAGCGCGAACCAACCTG 61.741 63.158 12.10 0.00 0.00 4.00
416 856 1.374252 CTAGCGCGAACCAACCTGT 60.374 57.895 12.10 0.00 0.00 4.00
417 857 1.626654 CTAGCGCGAACCAACCTGTG 61.627 60.000 12.10 0.00 0.00 3.66
432 872 5.422214 AACCTGTGGTTGGATAGTTAGAG 57.578 43.478 0.71 0.00 45.07 2.43
433 873 3.775316 ACCTGTGGTTGGATAGTTAGAGG 59.225 47.826 0.00 0.00 27.29 3.69
434 874 3.134804 CCTGTGGTTGGATAGTTAGAGGG 59.865 52.174 0.00 0.00 0.00 4.30
435 875 3.112263 TGTGGTTGGATAGTTAGAGGGG 58.888 50.000 0.00 0.00 0.00 4.79
436 876 2.124411 TGGTTGGATAGTTAGAGGGGC 58.876 52.381 0.00 0.00 0.00 5.80
437 877 2.124411 GGTTGGATAGTTAGAGGGGCA 58.876 52.381 0.00 0.00 0.00 5.36
438 878 2.508300 GGTTGGATAGTTAGAGGGGCAA 59.492 50.000 0.00 0.00 0.00 4.52
439 879 3.138468 GGTTGGATAGTTAGAGGGGCAAT 59.862 47.826 0.00 0.00 0.00 3.56
440 880 4.137543 GTTGGATAGTTAGAGGGGCAATG 58.862 47.826 0.00 0.00 0.00 2.82
441 881 2.711009 TGGATAGTTAGAGGGGCAATGG 59.289 50.000 0.00 0.00 0.00 3.16
442 882 2.553247 GGATAGTTAGAGGGGCAATGGC 60.553 54.545 0.00 0.00 40.13 4.40
443 883 1.590591 TAGTTAGAGGGGCAATGGCA 58.409 50.000 9.51 0.00 43.71 4.92
444 884 0.929244 AGTTAGAGGGGCAATGGCAT 59.071 50.000 9.51 0.00 43.71 4.40
445 885 1.133668 AGTTAGAGGGGCAATGGCATC 60.134 52.381 9.51 6.15 43.71 3.91
446 886 0.185901 TTAGAGGGGCAATGGCATCC 59.814 55.000 9.51 1.15 43.71 3.51
447 887 0.992970 TAGAGGGGCAATGGCATCCA 60.993 55.000 9.51 0.00 43.71 3.41
448 888 2.042639 AGGGGCAATGGCATCCAC 60.043 61.111 9.51 0.00 43.71 4.02
449 889 2.364056 GGGGCAATGGCATCCACA 60.364 61.111 9.51 0.00 43.71 4.17
450 890 2.428925 GGGGCAATGGCATCCACAG 61.429 63.158 9.51 0.00 43.71 3.66
451 891 2.497770 GGCAATGGCATCCACAGC 59.502 61.111 0.00 0.34 43.71 4.40
457 897 4.365111 GGCATCCACAGCCCACCA 62.365 66.667 0.00 0.00 46.50 4.17
458 898 2.283101 GCATCCACAGCCCACCAA 60.283 61.111 0.00 0.00 0.00 3.67
459 899 2.345760 GCATCCACAGCCCACCAAG 61.346 63.158 0.00 0.00 0.00 3.61
460 900 1.679977 CATCCACAGCCCACCAAGG 60.680 63.158 0.00 0.00 37.03 3.61
461 901 2.162906 ATCCACAGCCCACCAAGGT 61.163 57.895 0.00 0.00 34.66 3.50
462 902 1.729267 ATCCACAGCCCACCAAGGTT 61.729 55.000 0.00 0.00 34.66 3.50
463 903 1.903404 CCACAGCCCACCAAGGTTC 60.903 63.158 0.00 0.00 34.66 3.62
464 904 1.152777 CACAGCCCACCAAGGTTCA 60.153 57.895 0.00 0.00 34.66 3.18
465 905 0.754957 CACAGCCCACCAAGGTTCAA 60.755 55.000 0.00 0.00 34.66 2.69
466 906 0.468029 ACAGCCCACCAAGGTTCAAG 60.468 55.000 0.00 0.00 34.66 3.02
467 907 0.468029 CAGCCCACCAAGGTTCAAGT 60.468 55.000 0.00 0.00 34.66 3.16
468 908 0.178990 AGCCCACCAAGGTTCAAGTC 60.179 55.000 0.00 0.00 34.66 3.01
469 909 1.179174 GCCCACCAAGGTTCAAGTCC 61.179 60.000 0.00 0.00 34.66 3.85
470 910 0.478507 CCCACCAAGGTTCAAGTCCT 59.521 55.000 0.00 0.00 36.81 3.85
471 911 1.609208 CCACCAAGGTTCAAGTCCTG 58.391 55.000 0.00 0.00 35.27 3.86
472 912 1.609208 CACCAAGGTTCAAGTCCTGG 58.391 55.000 0.00 0.00 35.27 4.45
473 913 1.133792 CACCAAGGTTCAAGTCCTGGT 60.134 52.381 0.00 0.00 37.14 4.00
474 914 1.133792 ACCAAGGTTCAAGTCCTGGTG 60.134 52.381 0.00 0.00 36.18 4.17
475 915 0.954452 CAAGGTTCAAGTCCTGGTGC 59.046 55.000 0.00 0.00 35.27 5.01
476 916 0.846693 AAGGTTCAAGTCCTGGTGCT 59.153 50.000 0.00 0.00 35.27 4.40
477 917 0.398318 AGGTTCAAGTCCTGGTGCTC 59.602 55.000 0.00 0.00 33.62 4.26
478 918 0.951040 GGTTCAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
479 919 1.301716 TTCAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
480 920 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
481 921 1.376424 CAAGTCCTGGTGCTCGCAT 60.376 57.895 0.00 0.00 0.00 4.73
482 922 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
483 923 0.613260 AAGTCCTGGTGCTCGCATTA 59.387 50.000 0.00 0.00 0.00 1.90
484 924 0.833287 AGTCCTGGTGCTCGCATTAT 59.167 50.000 0.00 0.00 0.00 1.28
485 925 1.210478 AGTCCTGGTGCTCGCATTATT 59.790 47.619 0.00 0.00 0.00 1.40
486 926 1.599542 GTCCTGGTGCTCGCATTATTC 59.400 52.381 0.00 0.00 0.00 1.75
487 927 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
488 928 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
489 929 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
490 930 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
491 931 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
492 932 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
493 933 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
494 934 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
495 935 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
496 936 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
497 937 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
498 938 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
499 939 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
500 940 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
501 941 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
502 942 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
510 950 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
511 951 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
512 952 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
513 953 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
514 954 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
515 955 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
516 956 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
517 957 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
518 958 2.895372 GGATTTCCGGCGATGCGT 60.895 61.111 9.30 0.00 0.00 5.24
519 959 2.469516 GGATTTCCGGCGATGCGTT 61.470 57.895 9.30 0.00 0.00 4.84
520 960 1.427819 GATTTCCGGCGATGCGTTT 59.572 52.632 9.30 0.00 0.00 3.60
521 961 0.179174 GATTTCCGGCGATGCGTTTT 60.179 50.000 9.30 0.00 0.00 2.43
522 962 0.179174 ATTTCCGGCGATGCGTTTTC 60.179 50.000 9.30 0.00 0.00 2.29
523 963 1.507974 TTTCCGGCGATGCGTTTTCA 61.508 50.000 9.30 0.00 0.00 2.69
524 964 1.906994 TTCCGGCGATGCGTTTTCAG 61.907 55.000 9.30 0.00 0.00 3.02
525 965 2.677003 CCGGCGATGCGTTTTCAGT 61.677 57.895 9.30 0.00 0.00 3.41
526 966 1.509787 CGGCGATGCGTTTTCAGTG 60.510 57.895 0.00 0.00 0.00 3.66
527 967 1.574428 GGCGATGCGTTTTCAGTGT 59.426 52.632 0.00 0.00 0.00 3.55
528 968 0.793861 GGCGATGCGTTTTCAGTGTA 59.206 50.000 0.00 0.00 0.00 2.90
529 969 1.195900 GGCGATGCGTTTTCAGTGTAA 59.804 47.619 0.00 0.00 0.00 2.41
530 970 2.495939 GCGATGCGTTTTCAGTGTAAG 58.504 47.619 0.00 0.00 0.00 2.34
531 971 2.724839 GCGATGCGTTTTCAGTGTAAGG 60.725 50.000 0.00 0.00 0.00 2.69
532 972 2.734606 CGATGCGTTTTCAGTGTAAGGA 59.265 45.455 0.00 0.00 0.00 3.36
533 973 3.181530 CGATGCGTTTTCAGTGTAAGGAG 60.182 47.826 0.00 0.00 0.00 3.69
534 974 3.462483 TGCGTTTTCAGTGTAAGGAGA 57.538 42.857 0.00 0.00 0.00 3.71
535 975 3.128349 TGCGTTTTCAGTGTAAGGAGAC 58.872 45.455 0.00 0.00 0.00 3.36
536 976 2.155155 GCGTTTTCAGTGTAAGGAGACG 59.845 50.000 1.46 1.46 0.00 4.18
537 977 3.378339 CGTTTTCAGTGTAAGGAGACGT 58.622 45.455 0.00 0.00 0.00 4.34
538 978 3.800506 CGTTTTCAGTGTAAGGAGACGTT 59.199 43.478 0.00 0.00 0.00 3.99
539 979 4.085210 CGTTTTCAGTGTAAGGAGACGTTC 60.085 45.833 0.00 0.00 0.00 3.95
552 992 2.088338 GACGTTCCGTCGATGACTAG 57.912 55.000 6.11 0.00 46.56 2.57
553 993 0.731417 ACGTTCCGTCGATGACTAGG 59.269 55.000 6.11 0.00 33.69 3.02
554 994 0.591741 CGTTCCGTCGATGACTAGGC 60.592 60.000 6.11 0.00 0.00 3.93
555 995 0.591741 GTTCCGTCGATGACTAGGCG 60.592 60.000 6.11 0.00 0.00 5.52
556 996 2.332362 TTCCGTCGATGACTAGGCGC 62.332 60.000 6.11 0.00 0.00 6.53
557 997 2.353607 CGTCGATGACTAGGCGCC 60.354 66.667 21.89 21.89 0.00 6.53
558 998 2.835705 CGTCGATGACTAGGCGCCT 61.836 63.158 34.85 34.85 0.00 5.52
559 999 1.504647 CGTCGATGACTAGGCGCCTA 61.505 60.000 33.24 33.24 0.00 3.93
560 1000 0.040246 GTCGATGACTAGGCGCCTAC 60.040 60.000 32.24 23.05 0.00 3.18
561 1001 1.082038 CGATGACTAGGCGCCTACG 60.082 63.158 32.24 27.26 44.07 3.51
562 1002 1.286260 GATGACTAGGCGCCTACGG 59.714 63.158 32.24 24.67 40.57 4.02
572 1012 4.715983 GCCTACGGCGATTTCGTA 57.284 55.556 16.62 0.00 39.62 3.43
573 1013 2.962089 GCCTACGGCGATTTCGTAA 58.038 52.632 16.62 0.00 41.62 3.18
574 1014 1.280066 GCCTACGGCGATTTCGTAAA 58.720 50.000 16.62 0.00 41.62 2.01
575 1015 1.862827 GCCTACGGCGATTTCGTAAAT 59.137 47.619 16.62 0.00 41.62 1.40
576 1016 2.097056 GCCTACGGCGATTTCGTAAATC 60.097 50.000 16.62 9.11 41.62 2.17
577 1017 3.378339 CCTACGGCGATTTCGTAAATCT 58.622 45.455 16.62 0.00 43.98 2.40
578 1018 3.424529 CCTACGGCGATTTCGTAAATCTC 59.575 47.826 16.62 9.01 43.98 2.75
579 1019 2.883574 ACGGCGATTTCGTAAATCTCA 58.116 42.857 16.62 0.00 43.98 3.27
580 1020 3.255725 ACGGCGATTTCGTAAATCTCAA 58.744 40.909 16.62 0.00 43.98 3.02
581 1021 3.306166 ACGGCGATTTCGTAAATCTCAAG 59.694 43.478 16.62 9.25 43.98 3.02
582 1022 3.550275 CGGCGATTTCGTAAATCTCAAGA 59.450 43.478 0.00 0.00 43.98 3.02
583 1023 4.209288 CGGCGATTTCGTAAATCTCAAGAT 59.791 41.667 0.00 0.00 43.98 2.40
584 1024 5.435557 GGCGATTTCGTAAATCTCAAGATG 58.564 41.667 14.27 3.55 43.98 2.90
585 1025 5.234329 GGCGATTTCGTAAATCTCAAGATGA 59.766 40.000 14.27 0.00 43.98 2.92
586 1026 6.073548 GGCGATTTCGTAAATCTCAAGATGAT 60.074 38.462 14.27 0.00 43.98 2.45
587 1027 7.116376 GGCGATTTCGTAAATCTCAAGATGATA 59.884 37.037 14.27 0.00 43.98 2.15
588 1028 8.651588 GCGATTTCGTAAATCTCAAGATGATAT 58.348 33.333 14.27 0.00 43.98 1.63
589 1029 9.949377 CGATTTCGTAAATCTCAAGATGATATG 57.051 33.333 14.27 0.00 43.98 1.78
590 1030 9.752274 GATTTCGTAAATCTCAAGATGATATGC 57.248 33.333 10.96 0.00 43.08 3.14
591 1031 7.658179 TTCGTAAATCTCAAGATGATATGCC 57.342 36.000 0.00 0.00 34.49 4.40
592 1032 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
593 1033 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
594 1034 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
595 1035 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
596 1036 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
597 1037 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
598 1038 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
599 1039 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
600 1040 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
601 1041 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
602 1042 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
603 1043 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
604 1044 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
605 1045 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
606 1046 3.134792 GCCGGCTCAGTCTCTCGA 61.135 66.667 22.15 0.00 0.00 4.04
607 1047 2.701780 GCCGGCTCAGTCTCTCGAA 61.702 63.158 22.15 0.00 0.00 3.71
608 1048 1.431440 CCGGCTCAGTCTCTCGAAG 59.569 63.158 0.00 0.00 0.00 3.79
609 1049 1.431440 CGGCTCAGTCTCTCGAAGG 59.569 63.158 0.00 0.00 0.00 3.46
610 1050 1.309499 CGGCTCAGTCTCTCGAAGGT 61.309 60.000 0.00 0.00 0.00 3.50
611 1051 0.172352 GGCTCAGTCTCTCGAAGGTG 59.828 60.000 0.00 0.00 0.00 4.00
612 1052 0.457681 GCTCAGTCTCTCGAAGGTGC 60.458 60.000 0.00 0.00 0.00 5.01
613 1053 1.173043 CTCAGTCTCTCGAAGGTGCT 58.827 55.000 0.00 0.00 0.00 4.40
614 1054 1.132262 CTCAGTCTCTCGAAGGTGCTC 59.868 57.143 0.00 0.00 0.00 4.26
615 1055 0.884514 CAGTCTCTCGAAGGTGCTCA 59.115 55.000 0.00 0.00 0.00 4.26
616 1056 1.476085 CAGTCTCTCGAAGGTGCTCAT 59.524 52.381 0.00 0.00 0.00 2.90
617 1057 2.685388 CAGTCTCTCGAAGGTGCTCATA 59.315 50.000 0.00 0.00 0.00 2.15
618 1058 2.948979 AGTCTCTCGAAGGTGCTCATAG 59.051 50.000 0.00 0.00 0.00 2.23
619 1059 2.034053 GTCTCTCGAAGGTGCTCATAGG 59.966 54.545 0.00 0.00 0.00 2.57
620 1060 1.339610 CTCTCGAAGGTGCTCATAGGG 59.660 57.143 0.00 0.00 0.00 3.53
621 1061 0.390860 CTCGAAGGTGCTCATAGGGG 59.609 60.000 0.00 0.00 0.00 4.79
622 1062 0.325296 TCGAAGGTGCTCATAGGGGT 60.325 55.000 0.00 0.00 0.00 4.95
623 1063 1.063492 TCGAAGGTGCTCATAGGGGTA 60.063 52.381 0.00 0.00 0.00 3.69
624 1064 1.341531 CGAAGGTGCTCATAGGGGTAG 59.658 57.143 0.00 0.00 0.00 3.18
625 1065 1.694696 GAAGGTGCTCATAGGGGTAGG 59.305 57.143 0.00 0.00 0.00 3.18
626 1066 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
627 1067 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
628 1068 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
629 1069 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
630 1070 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
631 1071 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
632 1072 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
633 1073 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
634 1074 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
635 1075 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
636 1076 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
637 1077 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
638 1078 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
639 1079 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
642 1082 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
643 1083 2.099446 GTGTGCGTGTGTGCGTTT 59.901 55.556 0.00 0.00 37.81 3.60
644 1084 1.348938 GTGTGCGTGTGTGCGTTTA 59.651 52.632 0.00 0.00 37.81 2.01
645 1085 0.041663 GTGTGCGTGTGTGCGTTTAT 60.042 50.000 0.00 0.00 37.81 1.40
646 1086 1.192757 GTGTGCGTGTGTGCGTTTATA 59.807 47.619 0.00 0.00 37.81 0.98
647 1087 1.457683 TGTGCGTGTGTGCGTTTATAG 59.542 47.619 0.00 0.00 37.81 1.31
648 1088 1.072391 TGCGTGTGTGCGTTTATAGG 58.928 50.000 0.00 0.00 37.81 2.57
649 1089 0.372334 GCGTGTGTGCGTTTATAGGG 59.628 55.000 0.00 0.00 0.00 3.53
650 1090 1.999048 CGTGTGTGCGTTTATAGGGA 58.001 50.000 0.00 0.00 0.00 4.20
651 1091 2.546778 CGTGTGTGCGTTTATAGGGAT 58.453 47.619 0.00 0.00 0.00 3.85
652 1092 3.708890 CGTGTGTGCGTTTATAGGGATA 58.291 45.455 0.00 0.00 0.00 2.59
653 1093 4.114073 CGTGTGTGCGTTTATAGGGATAA 58.886 43.478 0.00 0.00 0.00 1.75
654 1094 4.208460 CGTGTGTGCGTTTATAGGGATAAG 59.792 45.833 0.00 0.00 0.00 1.73
655 1095 5.114081 GTGTGTGCGTTTATAGGGATAAGT 58.886 41.667 0.00 0.00 0.00 2.24
656 1096 5.006358 GTGTGTGCGTTTATAGGGATAAGTG 59.994 44.000 0.00 0.00 0.00 3.16
657 1097 5.114081 GTGTGCGTTTATAGGGATAAGTGT 58.886 41.667 0.00 0.00 0.00 3.55
658 1098 6.127394 TGTGTGCGTTTATAGGGATAAGTGTA 60.127 38.462 0.00 0.00 0.00 2.90
659 1099 6.927381 GTGTGCGTTTATAGGGATAAGTGTAT 59.073 38.462 0.00 0.00 0.00 2.29
660 1100 6.926826 TGTGCGTTTATAGGGATAAGTGTATG 59.073 38.462 0.00 0.00 0.00 2.39
661 1101 6.927381 GTGCGTTTATAGGGATAAGTGTATGT 59.073 38.462 0.00 0.00 0.00 2.29
662 1102 6.926826 TGCGTTTATAGGGATAAGTGTATGTG 59.073 38.462 0.00 0.00 0.00 3.21
663 1103 6.128634 GCGTTTATAGGGATAAGTGTATGTGC 60.129 42.308 0.00 0.00 0.00 4.57
664 1104 6.926826 CGTTTATAGGGATAAGTGTATGTGCA 59.073 38.462 0.00 0.00 0.00 4.57
665 1105 7.095774 CGTTTATAGGGATAAGTGTATGTGCAC 60.096 40.741 10.75 10.75 39.51 4.57
666 1106 5.887214 ATAGGGATAAGTGTATGTGCACA 57.113 39.130 24.08 24.08 41.52 4.57
667 1107 4.778213 AGGGATAAGTGTATGTGCACAT 57.222 40.909 33.20 33.20 41.52 3.21
668 1108 5.887214 AGGGATAAGTGTATGTGCACATA 57.113 39.130 31.03 31.03 41.52 2.29
669 1109 6.439636 AGGGATAAGTGTATGTGCACATAT 57.560 37.500 35.33 24.20 40.53 1.78
670 1110 7.553504 AGGGATAAGTGTATGTGCACATATA 57.446 36.000 35.33 31.02 40.53 0.86
671 1111 8.150827 AGGGATAAGTGTATGTGCACATATAT 57.849 34.615 35.33 28.07 40.53 0.86
672 1112 8.043113 AGGGATAAGTGTATGTGCACATATATG 58.957 37.037 35.33 11.29 40.53 1.78
673 1113 8.040727 GGGATAAGTGTATGTGCACATATATGA 58.959 37.037 35.33 23.20 40.53 2.15
674 1114 9.091784 GGATAAGTGTATGTGCACATATATGAG 57.908 37.037 35.33 12.52 40.53 2.90
675 1115 9.645059 GATAAGTGTATGTGCACATATATGAGT 57.355 33.333 35.33 22.55 40.53 3.41
676 1116 7.719778 AAGTGTATGTGCACATATATGAGTG 57.280 36.000 35.33 9.12 40.53 3.51
684 1124 4.380839 CACATATATGAGTGCTTGCGTC 57.619 45.455 19.63 0.00 0.00 5.19
685 1125 4.053983 CACATATATGAGTGCTTGCGTCT 58.946 43.478 19.63 0.00 0.00 4.18
686 1126 4.053983 ACATATATGAGTGCTTGCGTCTG 58.946 43.478 19.63 0.00 0.00 3.51
687 1127 2.680312 ATATGAGTGCTTGCGTCTGT 57.320 45.000 0.00 0.00 0.00 3.41
688 1128 3.801114 ATATGAGTGCTTGCGTCTGTA 57.199 42.857 0.00 0.00 0.00 2.74
689 1129 1.714794 ATGAGTGCTTGCGTCTGTAC 58.285 50.000 0.00 0.00 0.00 2.90
690 1130 0.673985 TGAGTGCTTGCGTCTGTACT 59.326 50.000 0.00 0.00 32.11 2.73
691 1131 1.063806 GAGTGCTTGCGTCTGTACTG 58.936 55.000 0.00 0.00 29.71 2.74
692 1132 0.389391 AGTGCTTGCGTCTGTACTGT 59.611 50.000 0.00 0.00 0.00 3.55
693 1133 0.508641 GTGCTTGCGTCTGTACTGTG 59.491 55.000 0.00 0.00 0.00 3.66
694 1134 0.104120 TGCTTGCGTCTGTACTGTGT 59.896 50.000 0.00 0.00 0.00 3.72
695 1135 1.217882 GCTTGCGTCTGTACTGTGTT 58.782 50.000 0.00 0.00 0.00 3.32
696 1136 2.223852 TGCTTGCGTCTGTACTGTGTTA 60.224 45.455 0.00 0.00 0.00 2.41
697 1137 2.798283 GCTTGCGTCTGTACTGTGTTAA 59.202 45.455 0.00 0.00 0.00 2.01
698 1138 3.246699 GCTTGCGTCTGTACTGTGTTAAA 59.753 43.478 0.00 0.00 0.00 1.52
699 1139 4.260456 GCTTGCGTCTGTACTGTGTTAAAA 60.260 41.667 0.00 0.00 0.00 1.52
700 1140 5.728344 GCTTGCGTCTGTACTGTGTTAAAAA 60.728 40.000 0.00 0.00 0.00 1.94
722 1162 2.350522 ACAAGAGCTAGCAAATCCACG 58.649 47.619 18.83 0.15 0.00 4.94
727 1167 1.086696 GCTAGCAAATCCACGAGCAA 58.913 50.000 10.63 0.00 0.00 3.91
729 1169 2.095263 GCTAGCAAATCCACGAGCAAAA 60.095 45.455 10.63 0.00 0.00 2.44
795 1264 1.163420 TGAGCGGTGACAAATGCGTT 61.163 50.000 0.00 0.00 0.00 4.84
797 1266 0.040425 AGCGGTGACAAATGCGTTTC 60.040 50.000 0.00 0.00 0.00 2.78
858 1330 0.250295 CAGACATGGTGTTCGTGGGT 60.250 55.000 0.00 0.00 36.71 4.51
879 1351 4.080526 GGTTCTCTTCCAGTGGGCTTAATA 60.081 45.833 9.92 0.00 0.00 0.98
891 1363 7.505585 CCAGTGGGCTTAATAAATTTCCATCTA 59.494 37.037 0.00 0.00 0.00 1.98
892 1364 9.082313 CAGTGGGCTTAATAAATTTCCATCTAT 57.918 33.333 0.00 0.00 0.00 1.98
893 1365 9.301897 AGTGGGCTTAATAAATTTCCATCTATC 57.698 33.333 0.00 0.00 0.00 2.08
894 1366 9.301897 GTGGGCTTAATAAATTTCCATCTATCT 57.698 33.333 0.00 0.00 0.00 1.98
895 1367 9.520515 TGGGCTTAATAAATTTCCATCTATCTC 57.479 33.333 0.00 0.00 0.00 2.75
896 1368 9.746457 GGGCTTAATAAATTTCCATCTATCTCT 57.254 33.333 0.00 0.00 0.00 3.10
911 1383 4.830600 TCTATCTCTCTCTCTCTCGCACTA 59.169 45.833 0.00 0.00 0.00 2.74
944 1419 1.628846 GTGTCACCCACCTTAGGTCAT 59.371 52.381 0.00 0.00 38.18 3.06
959 1434 1.407437 GGTCATCCGCATTTCACTCCT 60.407 52.381 0.00 0.00 0.00 3.69
960 1435 2.359900 GTCATCCGCATTTCACTCCTT 58.640 47.619 0.00 0.00 0.00 3.36
1210 1688 1.227497 CTCCTCGGCTTCATCCAGC 60.227 63.158 0.00 0.00 39.28 4.85
1220 1698 2.086869 CTTCATCCAGCCATTTGACGT 58.913 47.619 0.00 0.00 0.00 4.34
1424 1915 2.186826 CCATTCCCACGGGATTCGC 61.187 63.158 5.43 0.00 44.74 4.70
1426 1917 0.748005 CATTCCCACGGGATTCGCTT 60.748 55.000 5.43 0.00 44.74 4.68
1432 1923 1.740296 ACGGGATTCGCTTGGTTCG 60.740 57.895 0.00 0.00 43.89 3.95
1435 1926 1.078708 GGATTCGCTTGGTTCGGGA 60.079 57.895 0.00 0.00 0.00 5.14
1437 1928 0.672401 GATTCGCTTGGTTCGGGACA 60.672 55.000 0.00 0.00 0.00 4.02
1556 2065 0.801067 GCCTGCGTTTACTCGTCGAT 60.801 55.000 0.00 0.00 0.00 3.59
1598 2107 4.408921 TCTCATCCTAACACCGATTCCATT 59.591 41.667 0.00 0.00 0.00 3.16
1600 2109 4.163268 TCATCCTAACACCGATTCCATTCA 59.837 41.667 0.00 0.00 0.00 2.57
1760 2335 7.951347 ATAAGTCTGATTTTGAAGGCTTCAT 57.049 32.000 28.98 15.74 39.10 2.57
1861 2439 0.719465 CTGTAACGGTGTTCCATCGC 59.281 55.000 0.00 0.00 42.21 4.58
1960 2538 6.713762 TTGCTGAGGATAATAATTTGGTGG 57.286 37.500 0.00 0.00 0.00 4.61
1978 2556 3.214123 TCCTGCGGGTCGGTATCG 61.214 66.667 12.43 0.00 37.82 2.92
2026 2604 6.322969 TGAGTCACTACAGTTCAGGAAAGTTA 59.677 38.462 0.00 0.00 0.00 2.24
2155 2737 2.767960 GGGTTGATGGAATGCCTTTCAT 59.232 45.455 0.00 0.00 35.94 2.57
2159 2741 5.537674 GGTTGATGGAATGCCTTTCATATCT 59.462 40.000 0.00 0.00 35.94 1.98
2197 2779 8.066000 GCTAACAATTTTAACTAGTGTCGTGTT 58.934 33.333 0.00 5.75 0.00 3.32
2342 2937 6.008331 TCTAACTTAGCTCACACCAGTTCTA 58.992 40.000 0.00 0.00 0.00 2.10
2423 3020 4.393990 TCTGCTTGTTGACATATGCAAGAG 59.606 41.667 19.14 15.79 40.30 2.85
2553 3153 8.687824 ATGCCAAGTTGTTTTTAATATTCTCG 57.312 30.769 1.45 0.00 0.00 4.04
2746 3382 6.052360 TCGCCTATGTATGCACATTTAGAAA 58.948 36.000 0.00 0.00 42.98 2.52
2747 3383 6.710295 TCGCCTATGTATGCACATTTAGAAAT 59.290 34.615 0.00 0.00 42.98 2.17
2831 5345 6.619801 AAATCCATAATAGCGAGTTGGTTC 57.380 37.500 0.00 0.00 0.00 3.62
2843 5357 6.512297 AGCGAGTTGGTTCAAAATTTACAAT 58.488 32.000 0.00 0.00 0.00 2.71
3046 5757 7.039923 ACGAATTAACTGTCTTCCACTCTTCTA 60.040 37.037 0.00 0.00 0.00 2.10
3239 6047 7.559486 TGACTAATGACATCAATTGCTCTACT 58.441 34.615 0.00 0.00 0.00 2.57
3306 6114 5.418840 ACTTCTTTGCTGAAGGTTCTTTCAA 59.581 36.000 15.29 0.00 45.49 2.69
3742 6963 2.164422 TGGTATCGTGCAGACTGAAGAG 59.836 50.000 6.65 0.00 0.00 2.85
3743 6964 2.164624 GGTATCGTGCAGACTGAAGAGT 59.835 50.000 6.65 0.00 33.98 3.24
3875 7181 9.998106 AAAGCTATATGAAGATTATGTTACCGT 57.002 29.630 0.00 0.00 0.00 4.83
3921 7227 4.660789 AGCATTTCACTGAAGCAAGTTT 57.339 36.364 5.95 0.00 0.00 2.66
4046 7774 3.898123 AGATCGCCATTGTGGTAGACTAT 59.102 43.478 0.00 0.00 40.46 2.12
4098 7827 2.522836 ATCCGACATGCAGATCTCAC 57.477 50.000 0.00 0.00 0.00 3.51
4147 7877 5.662674 ACTAATTAAGGAGTGCTCGTTCT 57.337 39.130 9.95 1.33 38.46 3.01
4222 7952 3.244111 ACGCGTTTTTGGCTTTTTACATG 59.756 39.130 5.58 0.00 0.00 3.21
4223 7953 3.362499 CGCGTTTTTGGCTTTTTACATGG 60.362 43.478 0.00 0.00 0.00 3.66
4253 7983 2.742589 GCTTTCCACCGGTCTTTCTTAG 59.257 50.000 2.59 0.00 0.00 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.155826 CACCAACATTTTCCGATAAGCTGA 59.844 41.667 0.00 0.00 0.00 4.26
39 40 6.812160 GCTTGTAGTTGCTACACATAGTACTT 59.188 38.462 0.00 0.00 45.13 2.24
41 42 6.331061 AGCTTGTAGTTGCTACACATAGTAC 58.669 40.000 8.33 0.00 45.13 2.73
44 45 4.500837 CGAGCTTGTAGTTGCTACACATAG 59.499 45.833 8.33 5.57 45.13 2.23
113 114 5.751509 ACCATTCAAAAGAACCGCTTAAAAC 59.248 36.000 0.00 0.00 35.24 2.43
141 154 4.273969 GCAATGCATTTTATGGAACCCATG 59.726 41.667 9.83 0.00 44.84 3.66
173 186 5.356751 TGCTACACAAATAATCACCATGACC 59.643 40.000 0.00 0.00 0.00 4.02
175 188 7.445096 CCTATGCTACACAAATAATCACCATGA 59.555 37.037 0.00 0.00 0.00 3.07
176 189 7.445096 TCCTATGCTACACAAATAATCACCATG 59.555 37.037 0.00 0.00 0.00 3.66
177 190 7.517320 TCCTATGCTACACAAATAATCACCAT 58.483 34.615 0.00 0.00 0.00 3.55
178 191 6.894682 TCCTATGCTACACAAATAATCACCA 58.105 36.000 0.00 0.00 0.00 4.17
179 192 7.094634 CCATCCTATGCTACACAAATAATCACC 60.095 40.741 0.00 0.00 0.00 4.02
180 193 7.573843 GCCATCCTATGCTACACAAATAATCAC 60.574 40.741 0.00 0.00 0.00 3.06
199 212 4.768968 GCCACAAATAATCATAGCCATCCT 59.231 41.667 0.00 0.00 0.00 3.24
227 240 4.970662 TGCATTCTTTCAGCATAACCTC 57.029 40.909 0.00 0.00 32.55 3.85
228 241 4.381292 GCTTGCATTCTTTCAGCATAACCT 60.381 41.667 0.00 0.00 38.19 3.50
256 696 6.998802 AGTCTACCATTTCTATCTATGTGGC 58.001 40.000 0.00 0.00 0.00 5.01
263 703 5.463154 AGGCTGAGTCTACCATTTCTATCT 58.537 41.667 0.00 0.00 0.00 1.98
264 704 5.799827 AGGCTGAGTCTACCATTTCTATC 57.200 43.478 0.00 0.00 0.00 2.08
266 706 6.374417 AAAAGGCTGAGTCTACCATTTCTA 57.626 37.500 0.00 0.00 0.00 2.10
269 709 9.700831 ATAATAAAAAGGCTGAGTCTACCATTT 57.299 29.630 0.00 2.92 0.00 2.32
270 710 9.343539 GATAATAAAAAGGCTGAGTCTACCATT 57.656 33.333 0.00 0.00 0.00 3.16
271 711 7.939588 GGATAATAAAAAGGCTGAGTCTACCAT 59.060 37.037 0.00 0.00 0.00 3.55
272 712 7.092623 TGGATAATAAAAAGGCTGAGTCTACCA 60.093 37.037 0.00 0.00 0.00 3.25
274 714 7.042658 CGTGGATAATAAAAAGGCTGAGTCTAC 60.043 40.741 0.00 0.00 0.00 2.59
275 715 6.984474 CGTGGATAATAAAAAGGCTGAGTCTA 59.016 38.462 0.00 0.00 0.00 2.59
276 716 5.817816 CGTGGATAATAAAAAGGCTGAGTCT 59.182 40.000 0.00 0.00 0.00 3.24
277 717 5.007724 CCGTGGATAATAAAAAGGCTGAGTC 59.992 44.000 0.00 0.00 0.00 3.36
278 718 4.881850 CCGTGGATAATAAAAAGGCTGAGT 59.118 41.667 0.00 0.00 0.00 3.41
280 720 4.080243 TCCCGTGGATAATAAAAAGGCTGA 60.080 41.667 0.00 0.00 0.00 4.26
281 721 4.204012 TCCCGTGGATAATAAAAAGGCTG 58.796 43.478 0.00 0.00 0.00 4.85
282 722 4.513406 TCCCGTGGATAATAAAAAGGCT 57.487 40.909 0.00 0.00 0.00 4.58
283 723 5.528870 CAATCCCGTGGATAATAAAAAGGC 58.471 41.667 5.94 0.00 42.27 4.35
284 724 5.068460 TGCAATCCCGTGGATAATAAAAAGG 59.932 40.000 5.94 0.00 42.27 3.11
285 725 6.142818 TGCAATCCCGTGGATAATAAAAAG 57.857 37.500 5.94 0.00 42.27 2.27
286 726 6.322456 TGATGCAATCCCGTGGATAATAAAAA 59.678 34.615 5.94 0.00 44.73 1.94
287 727 5.830457 TGATGCAATCCCGTGGATAATAAAA 59.170 36.000 5.94 0.00 44.73 1.52
288 728 5.380900 TGATGCAATCCCGTGGATAATAAA 58.619 37.500 5.94 0.00 44.73 1.40
289 729 4.979335 TGATGCAATCCCGTGGATAATAA 58.021 39.130 5.94 0.00 44.73 1.40
290 730 4.632327 TGATGCAATCCCGTGGATAATA 57.368 40.909 5.94 0.00 44.73 0.98
291 731 3.507162 TGATGCAATCCCGTGGATAAT 57.493 42.857 5.94 2.01 44.73 1.28
292 732 2.948979 GTTGATGCAATCCCGTGGATAA 59.051 45.455 5.94 0.00 44.73 1.75
293 733 2.092699 TGTTGATGCAATCCCGTGGATA 60.093 45.455 5.94 0.00 44.73 2.59
294 734 1.340893 TGTTGATGCAATCCCGTGGAT 60.341 47.619 0.00 0.05 44.73 3.41
295 735 0.037447 TGTTGATGCAATCCCGTGGA 59.963 50.000 0.00 0.00 44.73 4.02
296 736 0.887247 TTGTTGATGCAATCCCGTGG 59.113 50.000 0.00 0.00 44.73 4.94
297 737 2.532235 CATTGTTGATGCAATCCCGTG 58.468 47.619 0.00 0.00 44.73 4.94
298 738 1.477700 CCATTGTTGATGCAATCCCGT 59.522 47.619 0.00 0.00 44.73 5.28
299 739 1.750206 TCCATTGTTGATGCAATCCCG 59.250 47.619 0.00 0.00 44.73 5.14
300 740 3.025978 TCTCCATTGTTGATGCAATCCC 58.974 45.455 0.00 0.00 44.73 3.85
301 741 4.931661 ATCTCCATTGTTGATGCAATCC 57.068 40.909 0.00 0.00 44.73 3.01
302 742 5.911280 CGTAATCTCCATTGTTGATGCAATC 59.089 40.000 0.00 0.00 45.83 2.67
303 743 5.734220 GCGTAATCTCCATTGTTGATGCAAT 60.734 40.000 0.00 0.00 39.42 3.56
304 744 4.438608 GCGTAATCTCCATTGTTGATGCAA 60.439 41.667 0.00 0.00 34.25 4.08
305 745 3.065233 GCGTAATCTCCATTGTTGATGCA 59.935 43.478 0.00 0.00 34.25 3.96
306 746 3.065233 TGCGTAATCTCCATTGTTGATGC 59.935 43.478 0.00 0.00 34.25 3.91
307 747 4.880886 TGCGTAATCTCCATTGTTGATG 57.119 40.909 0.00 0.00 35.42 3.07
308 748 7.308770 CCATTATGCGTAATCTCCATTGTTGAT 60.309 37.037 8.25 0.00 0.00 2.57
309 749 6.017192 CCATTATGCGTAATCTCCATTGTTGA 60.017 38.462 8.25 0.00 0.00 3.18
310 750 6.017192 TCCATTATGCGTAATCTCCATTGTTG 60.017 38.462 8.25 0.00 0.00 3.33
313 753 6.596888 AGATCCATTATGCGTAATCTCCATTG 59.403 38.462 8.25 0.00 0.00 2.82
356 796 5.394224 GCTTGATGGTAGTAGTCTGCTAACA 60.394 44.000 16.83 16.83 40.01 2.41
362 802 4.428209 CACTGCTTGATGGTAGTAGTCTG 58.572 47.826 0.00 0.00 36.59 3.51
391 831 1.446272 GGTTCGCGCTAGCTCTTGT 60.446 57.895 13.93 0.00 42.32 3.16
392 832 1.014044 TTGGTTCGCGCTAGCTCTTG 61.014 55.000 13.93 0.00 42.32 3.02
393 833 1.014564 GTTGGTTCGCGCTAGCTCTT 61.015 55.000 13.93 0.00 42.32 2.85
394 834 1.446272 GTTGGTTCGCGCTAGCTCT 60.446 57.895 13.93 0.00 42.32 4.09
395 835 2.453638 GGTTGGTTCGCGCTAGCTC 61.454 63.158 13.93 3.37 42.32 4.09
396 836 2.434359 GGTTGGTTCGCGCTAGCT 60.434 61.111 13.93 0.00 42.32 3.32
397 837 2.434359 AGGTTGGTTCGCGCTAGC 60.434 61.111 5.56 4.06 40.74 3.42
398 838 1.374252 ACAGGTTGGTTCGCGCTAG 60.374 57.895 5.56 0.00 0.00 3.42
399 839 1.666553 CACAGGTTGGTTCGCGCTA 60.667 57.895 5.56 0.00 0.00 4.26
400 840 2.972505 CACAGGTTGGTTCGCGCT 60.973 61.111 5.56 0.00 0.00 5.92
401 841 4.025401 CCACAGGTTGGTTCGCGC 62.025 66.667 0.00 0.00 41.10 6.86
411 851 3.775316 CCTCTAACTATCCAACCACAGGT 59.225 47.826 0.00 0.00 37.65 4.00
412 852 3.134804 CCCTCTAACTATCCAACCACAGG 59.865 52.174 0.00 0.00 0.00 4.00
413 853 3.134804 CCCCTCTAACTATCCAACCACAG 59.865 52.174 0.00 0.00 0.00 3.66
414 854 3.112263 CCCCTCTAACTATCCAACCACA 58.888 50.000 0.00 0.00 0.00 4.17
415 855 2.158798 GCCCCTCTAACTATCCAACCAC 60.159 54.545 0.00 0.00 0.00 4.16
416 856 2.124411 GCCCCTCTAACTATCCAACCA 58.876 52.381 0.00 0.00 0.00 3.67
417 857 2.124411 TGCCCCTCTAACTATCCAACC 58.876 52.381 0.00 0.00 0.00 3.77
418 858 3.926058 TTGCCCCTCTAACTATCCAAC 57.074 47.619 0.00 0.00 0.00 3.77
419 859 3.138283 CCATTGCCCCTCTAACTATCCAA 59.862 47.826 0.00 0.00 0.00 3.53
420 860 2.711009 CCATTGCCCCTCTAACTATCCA 59.289 50.000 0.00 0.00 0.00 3.41
421 861 2.553247 GCCATTGCCCCTCTAACTATCC 60.553 54.545 0.00 0.00 0.00 2.59
422 862 2.106511 TGCCATTGCCCCTCTAACTATC 59.893 50.000 0.00 0.00 36.33 2.08
423 863 2.135189 TGCCATTGCCCCTCTAACTAT 58.865 47.619 0.00 0.00 36.33 2.12
424 864 1.590591 TGCCATTGCCCCTCTAACTA 58.409 50.000 0.00 0.00 36.33 2.24
425 865 0.929244 ATGCCATTGCCCCTCTAACT 59.071 50.000 0.00 0.00 36.33 2.24
426 866 1.322442 GATGCCATTGCCCCTCTAAC 58.678 55.000 0.00 0.00 36.33 2.34
427 867 0.185901 GGATGCCATTGCCCCTCTAA 59.814 55.000 0.00 0.00 36.33 2.10
428 868 0.992970 TGGATGCCATTGCCCCTCTA 60.993 55.000 0.00 0.00 36.33 2.43
429 869 2.318966 TGGATGCCATTGCCCCTCT 61.319 57.895 0.00 0.00 36.33 3.69
430 870 2.129785 GTGGATGCCATTGCCCCTC 61.130 63.158 0.00 0.00 35.28 4.30
431 871 2.042639 GTGGATGCCATTGCCCCT 60.043 61.111 0.00 0.00 35.28 4.79
432 872 2.364056 TGTGGATGCCATTGCCCC 60.364 61.111 0.00 0.00 35.28 5.80
433 873 3.085119 GCTGTGGATGCCATTGCCC 62.085 63.158 0.00 0.00 35.28 5.36
434 874 2.497770 GCTGTGGATGCCATTGCC 59.502 61.111 0.00 0.00 35.28 4.52
441 881 2.283101 TTGGTGGGCTGTGGATGC 60.283 61.111 0.00 0.00 0.00 3.91
442 882 1.679977 CCTTGGTGGGCTGTGGATG 60.680 63.158 0.00 0.00 0.00 3.51
443 883 1.729267 AACCTTGGTGGGCTGTGGAT 61.729 55.000 0.00 0.00 41.11 3.41
444 884 2.351924 GAACCTTGGTGGGCTGTGGA 62.352 60.000 0.00 0.00 41.11 4.02
445 885 1.903404 GAACCTTGGTGGGCTGTGG 60.903 63.158 0.00 0.00 41.11 4.17
446 886 0.754957 TTGAACCTTGGTGGGCTGTG 60.755 55.000 0.00 0.00 41.11 3.66
447 887 0.468029 CTTGAACCTTGGTGGGCTGT 60.468 55.000 0.00 0.00 41.11 4.40
448 888 0.468029 ACTTGAACCTTGGTGGGCTG 60.468 55.000 0.00 0.00 41.11 4.85
449 889 0.178990 GACTTGAACCTTGGTGGGCT 60.179 55.000 0.00 0.00 41.11 5.19
450 890 1.179174 GGACTTGAACCTTGGTGGGC 61.179 60.000 0.00 0.00 41.11 5.36
451 891 0.478507 AGGACTTGAACCTTGGTGGG 59.521 55.000 0.00 0.00 41.11 4.61
452 892 1.609208 CAGGACTTGAACCTTGGTGG 58.391 55.000 0.00 0.00 42.93 4.61
453 893 1.133792 ACCAGGACTTGAACCTTGGTG 60.134 52.381 0.00 0.00 37.46 4.17
454 894 1.133792 CACCAGGACTTGAACCTTGGT 60.134 52.381 0.00 0.00 38.47 3.67
455 895 1.609208 CACCAGGACTTGAACCTTGG 58.391 55.000 0.00 0.00 35.35 3.61
456 896 0.954452 GCACCAGGACTTGAACCTTG 59.046 55.000 0.00 0.00 35.35 3.61
457 897 0.846693 AGCACCAGGACTTGAACCTT 59.153 50.000 0.00 0.00 35.35 3.50
458 898 0.398318 GAGCACCAGGACTTGAACCT 59.602 55.000 0.00 0.00 38.40 3.50
459 899 0.951040 CGAGCACCAGGACTTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
460 900 1.569479 GCGAGCACCAGGACTTGAAC 61.569 60.000 0.00 0.00 0.00 3.18
461 901 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
462 902 1.830587 ATGCGAGCACCAGGACTTGA 61.831 55.000 0.00 0.00 0.00 3.02
463 903 0.957395 AATGCGAGCACCAGGACTTG 60.957 55.000 0.00 0.00 0.00 3.16
464 904 0.613260 TAATGCGAGCACCAGGACTT 59.387 50.000 0.00 0.00 0.00 3.01
465 905 0.833287 ATAATGCGAGCACCAGGACT 59.167 50.000 0.00 0.00 0.00 3.85
466 906 1.599542 GAATAATGCGAGCACCAGGAC 59.400 52.381 0.00 0.00 0.00 3.85
467 907 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
468 908 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
469 909 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
470 910 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
471 911 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
472 912 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
473 913 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
474 914 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
475 915 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
476 916 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
486 926 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
487 927 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
488 928 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
489 929 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
490 930 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
491 931 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
492 932 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
493 933 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
494 934 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
495 935 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
496 936 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
497 937 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
498 938 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
499 939 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
500 940 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
501 941 1.988834 AAACGCATCGCCGGAAATCC 61.989 55.000 5.05 0.00 0.00 3.01
502 942 0.179174 AAAACGCATCGCCGGAAATC 60.179 50.000 5.05 0.00 0.00 2.17
503 943 0.179174 GAAAACGCATCGCCGGAAAT 60.179 50.000 5.05 0.00 0.00 2.17
504 944 1.208103 GAAAACGCATCGCCGGAAA 59.792 52.632 5.05 0.00 0.00 3.13
505 945 1.906994 CTGAAAACGCATCGCCGGAA 61.907 55.000 5.05 0.00 0.00 4.30
506 946 2.357638 TGAAAACGCATCGCCGGA 60.358 55.556 5.05 0.00 0.00 5.14
507 947 2.098298 CTGAAAACGCATCGCCGG 59.902 61.111 0.00 0.00 0.00 6.13
508 948 1.509787 CACTGAAAACGCATCGCCG 60.510 57.895 0.00 0.00 0.00 6.46
509 949 0.793861 TACACTGAAAACGCATCGCC 59.206 50.000 0.00 0.00 0.00 5.54
510 950 2.495939 CTTACACTGAAAACGCATCGC 58.504 47.619 0.00 0.00 0.00 4.58
511 951 2.734606 TCCTTACACTGAAAACGCATCG 59.265 45.455 0.00 0.00 0.00 3.84
512 952 3.994392 TCTCCTTACACTGAAAACGCATC 59.006 43.478 0.00 0.00 0.00 3.91
513 953 3.746492 GTCTCCTTACACTGAAAACGCAT 59.254 43.478 0.00 0.00 0.00 4.73
514 954 3.128349 GTCTCCTTACACTGAAAACGCA 58.872 45.455 0.00 0.00 0.00 5.24
515 955 2.155155 CGTCTCCTTACACTGAAAACGC 59.845 50.000 0.00 0.00 0.00 4.84
516 956 3.378339 ACGTCTCCTTACACTGAAAACG 58.622 45.455 0.00 0.00 0.00 3.60
517 957 4.210746 GGAACGTCTCCTTACACTGAAAAC 59.789 45.833 8.87 0.00 41.61 2.43
518 958 4.374399 GGAACGTCTCCTTACACTGAAAA 58.626 43.478 8.87 0.00 41.61 2.29
519 959 3.986277 GGAACGTCTCCTTACACTGAAA 58.014 45.455 8.87 0.00 41.61 2.69
520 960 3.655276 GGAACGTCTCCTTACACTGAA 57.345 47.619 8.87 0.00 41.61 3.02
536 976 0.591741 CGCCTAGTCATCGACGGAAC 60.592 60.000 0.00 0.00 37.67 3.62
537 977 1.725665 CGCCTAGTCATCGACGGAA 59.274 57.895 0.00 0.00 37.67 4.30
538 978 2.831366 GCGCCTAGTCATCGACGGA 61.831 63.158 0.00 0.00 37.67 4.69
539 979 2.353607 GCGCCTAGTCATCGACGG 60.354 66.667 0.00 0.00 37.67 4.79
540 980 1.504647 TAGGCGCCTAGTCATCGACG 61.505 60.000 32.24 0.00 37.67 5.12
541 981 0.040246 GTAGGCGCCTAGTCATCGAC 60.040 60.000 36.09 20.72 0.00 4.20
542 982 1.504647 CGTAGGCGCCTAGTCATCGA 61.505 60.000 36.09 12.33 0.00 3.59
543 983 1.082038 CGTAGGCGCCTAGTCATCG 60.082 63.158 36.09 28.96 0.00 3.84
544 984 1.286260 CCGTAGGCGCCTAGTCATC 59.714 63.158 36.09 22.12 46.14 2.92
545 985 3.444737 CCGTAGGCGCCTAGTCAT 58.555 61.111 36.09 13.13 46.14 3.06
556 996 3.765505 GATTTACGAAATCGCCGTAGG 57.234 47.619 2.15 0.00 44.14 3.18
564 1004 9.752274 GCATATCATCTTGAGATTTACGAAATC 57.248 33.333 10.50 10.50 45.98 2.17
565 1005 8.725148 GGCATATCATCTTGAGATTTACGAAAT 58.275 33.333 0.00 0.00 31.21 2.17
566 1006 7.095649 CGGCATATCATCTTGAGATTTACGAAA 60.096 37.037 0.00 0.00 31.21 3.46
567 1007 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
568 1008 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
569 1009 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
570 1010 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
571 1011 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
572 1012 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
573 1013 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
574 1014 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
575 1015 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
576 1016 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
577 1017 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
578 1018 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
579 1019 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
580 1020 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
581 1021 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
582 1022 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
583 1023 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
584 1024 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
585 1025 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
586 1026 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
587 1027 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
588 1028 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
589 1029 2.606155 CTTCGAGAGACTGAGCCGGC 62.606 65.000 21.89 21.89 41.84 6.13
590 1030 1.431440 CTTCGAGAGACTGAGCCGG 59.569 63.158 0.00 0.00 41.84 6.13
591 1031 1.309499 ACCTTCGAGAGACTGAGCCG 61.309 60.000 0.00 0.00 41.84 5.52
592 1032 0.172352 CACCTTCGAGAGACTGAGCC 59.828 60.000 0.00 0.00 41.84 4.70
593 1033 0.457681 GCACCTTCGAGAGACTGAGC 60.458 60.000 0.00 0.00 41.84 4.26
594 1034 1.132262 GAGCACCTTCGAGAGACTGAG 59.868 57.143 0.00 0.00 41.84 3.35
595 1035 1.169577 GAGCACCTTCGAGAGACTGA 58.830 55.000 0.00 0.00 41.84 3.41
596 1036 0.884514 TGAGCACCTTCGAGAGACTG 59.115 55.000 0.00 0.00 41.84 3.51
597 1037 1.846007 ATGAGCACCTTCGAGAGACT 58.154 50.000 0.00 0.00 41.84 3.24
598 1038 2.034053 CCTATGAGCACCTTCGAGAGAC 59.966 54.545 0.00 0.00 41.84 3.36
599 1039 2.302260 CCTATGAGCACCTTCGAGAGA 58.698 52.381 0.00 0.00 39.20 3.10
600 1040 1.339610 CCCTATGAGCACCTTCGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
601 1041 1.403814 CCCTATGAGCACCTTCGAGA 58.596 55.000 0.00 0.00 0.00 4.04
602 1042 0.390860 CCCCTATGAGCACCTTCGAG 59.609 60.000 0.00 0.00 0.00 4.04
603 1043 0.325296 ACCCCTATGAGCACCTTCGA 60.325 55.000 0.00 0.00 0.00 3.71
604 1044 1.341531 CTACCCCTATGAGCACCTTCG 59.658 57.143 0.00 0.00 0.00 3.79
605 1045 1.694696 CCTACCCCTATGAGCACCTTC 59.305 57.143 0.00 0.00 0.00 3.46
606 1046 1.695989 CCCTACCCCTATGAGCACCTT 60.696 57.143 0.00 0.00 0.00 3.50
607 1047 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
608 1048 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
609 1049 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
610 1050 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
611 1051 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
612 1052 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
613 1053 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
614 1054 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
615 1055 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
616 1056 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
617 1057 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
618 1058 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
619 1059 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
620 1060 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
621 1061 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
622 1062 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
625 1065 2.037913 TAAACGCACACACGCACACC 62.038 55.000 0.00 0.00 36.19 4.16
626 1066 0.041663 ATAAACGCACACACGCACAC 60.042 50.000 0.00 0.00 36.19 3.82
627 1067 1.457683 CTATAAACGCACACACGCACA 59.542 47.619 0.00 0.00 36.19 4.57
628 1068 1.201877 CCTATAAACGCACACACGCAC 60.202 52.381 0.00 0.00 36.19 5.34
629 1069 1.072391 CCTATAAACGCACACACGCA 58.928 50.000 0.00 0.00 36.19 5.24
630 1070 0.372334 CCCTATAAACGCACACACGC 59.628 55.000 0.00 0.00 36.19 5.34
631 1071 1.999048 TCCCTATAAACGCACACACG 58.001 50.000 0.00 0.00 39.50 4.49
632 1072 5.006358 CACTTATCCCTATAAACGCACACAC 59.994 44.000 0.00 0.00 0.00 3.82
633 1073 5.113383 CACTTATCCCTATAAACGCACACA 58.887 41.667 0.00 0.00 0.00 3.72
634 1074 5.114081 ACACTTATCCCTATAAACGCACAC 58.886 41.667 0.00 0.00 0.00 3.82
635 1075 5.347620 ACACTTATCCCTATAAACGCACA 57.652 39.130 0.00 0.00 0.00 4.57
636 1076 6.927381 ACATACACTTATCCCTATAAACGCAC 59.073 38.462 0.00 0.00 0.00 5.34
637 1077 6.926826 CACATACACTTATCCCTATAAACGCA 59.073 38.462 0.00 0.00 0.00 5.24
638 1078 6.128634 GCACATACACTTATCCCTATAAACGC 60.129 42.308 0.00 0.00 0.00 4.84
639 1079 6.926826 TGCACATACACTTATCCCTATAAACG 59.073 38.462 0.00 0.00 0.00 3.60
640 1080 7.713507 TGTGCACATACACTTATCCCTATAAAC 59.286 37.037 17.42 0.00 41.30 2.01
641 1081 7.797062 TGTGCACATACACTTATCCCTATAAA 58.203 34.615 17.42 0.00 41.30 1.40
642 1082 7.368198 TGTGCACATACACTTATCCCTATAA 57.632 36.000 17.42 0.00 41.30 0.98
643 1083 6.987403 TGTGCACATACACTTATCCCTATA 57.013 37.500 17.42 0.00 41.30 1.31
644 1084 5.887214 TGTGCACATACACTTATCCCTAT 57.113 39.130 17.42 0.00 41.30 2.57
645 1085 5.887214 ATGTGCACATACACTTATCCCTA 57.113 39.130 30.50 0.00 41.30 3.53
646 1086 4.778213 ATGTGCACATACACTTATCCCT 57.222 40.909 30.50 2.37 41.30 4.20
647 1087 8.040727 TCATATATGTGCACATACACTTATCCC 58.959 37.037 35.53 0.00 41.15 3.85
648 1088 9.091784 CTCATATATGTGCACATACACTTATCC 57.908 37.037 35.53 0.00 41.15 2.59
649 1089 9.645059 ACTCATATATGTGCACATACACTTATC 57.355 33.333 35.53 0.00 41.15 1.75
650 1090 9.428097 CACTCATATATGTGCACATACACTTAT 57.572 33.333 35.53 26.11 41.15 1.73
651 1091 8.816640 CACTCATATATGTGCACATACACTTA 57.183 34.615 35.53 25.24 41.15 2.24
652 1092 7.719778 CACTCATATATGTGCACATACACTT 57.280 36.000 35.53 24.09 41.15 3.16
663 1103 4.053983 AGACGCAAGCACTCATATATGTG 58.946 43.478 12.42 12.31 45.62 3.21
664 1104 4.053983 CAGACGCAAGCACTCATATATGT 58.946 43.478 12.42 0.00 45.62 2.29
665 1105 4.053983 ACAGACGCAAGCACTCATATATG 58.946 43.478 6.36 6.36 45.62 1.78
666 1106 4.327982 ACAGACGCAAGCACTCATATAT 57.672 40.909 0.00 0.00 45.62 0.86
667 1107 3.801114 ACAGACGCAAGCACTCATATA 57.199 42.857 0.00 0.00 45.62 0.86
668 1108 2.680312 ACAGACGCAAGCACTCATAT 57.320 45.000 0.00 0.00 45.62 1.78
669 1109 2.492088 AGTACAGACGCAAGCACTCATA 59.508 45.455 0.00 0.00 45.62 2.15
670 1110 1.273606 AGTACAGACGCAAGCACTCAT 59.726 47.619 0.00 0.00 45.62 2.90
671 1111 0.673985 AGTACAGACGCAAGCACTCA 59.326 50.000 0.00 0.00 45.62 3.41
672 1112 1.063806 CAGTACAGACGCAAGCACTC 58.936 55.000 0.00 0.00 45.62 3.51
673 1113 0.389391 ACAGTACAGACGCAAGCACT 59.611 50.000 0.00 0.00 45.62 4.40
674 1114 0.508641 CACAGTACAGACGCAAGCAC 59.491 55.000 0.00 0.00 45.62 4.40
675 1115 0.104120 ACACAGTACAGACGCAAGCA 59.896 50.000 0.00 0.00 45.62 3.91
676 1116 1.217882 AACACAGTACAGACGCAAGC 58.782 50.000 0.00 0.00 45.62 4.01
678 1118 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
698 1138 5.532557 GTGGATTTGCTAGCTCTTGTTTTT 58.467 37.500 17.23 0.00 0.00 1.94
699 1139 4.320494 CGTGGATTTGCTAGCTCTTGTTTT 60.320 41.667 17.23 0.00 0.00 2.43
700 1140 3.189287 CGTGGATTTGCTAGCTCTTGTTT 59.811 43.478 17.23 0.00 0.00 2.83
701 1141 2.744202 CGTGGATTTGCTAGCTCTTGTT 59.256 45.455 17.23 0.00 0.00 2.83
772 1241 2.468831 GCATTTGTCACCGCTCAAAAA 58.531 42.857 0.00 0.00 37.16 1.94
773 1242 1.599171 CGCATTTGTCACCGCTCAAAA 60.599 47.619 0.00 0.00 37.16 2.44
774 1243 0.040514 CGCATTTGTCACCGCTCAAA 60.041 50.000 0.00 0.00 37.82 2.69
775 1244 1.163420 ACGCATTTGTCACCGCTCAA 61.163 50.000 0.00 0.00 0.00 3.02
776 1245 1.163420 AACGCATTTGTCACCGCTCA 61.163 50.000 0.00 0.00 0.00 4.26
777 1246 0.040425 AAACGCATTTGTCACCGCTC 60.040 50.000 0.00 0.00 0.00 5.03
778 1247 0.040425 GAAACGCATTTGTCACCGCT 60.040 50.000 0.00 0.00 0.00 5.52
779 1248 0.040425 AGAAACGCATTTGTCACCGC 60.040 50.000 0.00 0.00 0.00 5.68
780 1249 1.673760 CAGAAACGCATTTGTCACCG 58.326 50.000 0.00 0.00 0.00 4.94
781 1250 1.001378 AGCAGAAACGCATTTGTCACC 60.001 47.619 0.00 0.00 0.00 4.02
782 1251 2.405892 AGCAGAAACGCATTTGTCAC 57.594 45.000 0.00 0.00 0.00 3.67
783 1252 3.114809 CAAAGCAGAAACGCATTTGTCA 58.885 40.909 0.00 0.00 31.32 3.58
784 1253 3.115554 ACAAAGCAGAAACGCATTTGTC 58.884 40.909 0.00 0.00 38.06 3.18
785 1254 3.163630 ACAAAGCAGAAACGCATTTGT 57.836 38.095 0.00 0.00 37.88 2.83
795 1264 1.003118 ACGAGCCCATACAAAGCAGAA 59.997 47.619 0.00 0.00 0.00 3.02
797 1266 0.729116 CACGAGCCCATACAAAGCAG 59.271 55.000 0.00 0.00 0.00 4.24
858 1330 5.772393 TTATTAAGCCCACTGGAAGAGAA 57.228 39.130 0.00 0.00 37.43 2.87
879 1351 9.082313 GAGAGAGAGAGAGATAGATGGAAATTT 57.918 37.037 0.00 0.00 0.00 1.82
891 1363 3.803715 GCTAGTGCGAGAGAGAGAGAGAT 60.804 52.174 0.00 0.00 0.00 2.75
892 1364 2.483013 GCTAGTGCGAGAGAGAGAGAGA 60.483 54.545 0.00 0.00 0.00 3.10
893 1365 1.867233 GCTAGTGCGAGAGAGAGAGAG 59.133 57.143 0.00 0.00 0.00 3.20
894 1366 1.208293 TGCTAGTGCGAGAGAGAGAGA 59.792 52.381 0.00 0.00 43.34 3.10
895 1367 1.599071 CTGCTAGTGCGAGAGAGAGAG 59.401 57.143 0.00 0.00 43.34 3.20
896 1368 1.662517 CTGCTAGTGCGAGAGAGAGA 58.337 55.000 0.00 0.00 43.34 3.10
897 1369 0.029300 GCTGCTAGTGCGAGAGAGAG 59.971 60.000 0.00 0.00 43.34 3.20
898 1370 2.102554 GCTGCTAGTGCGAGAGAGA 58.897 57.895 0.00 0.00 43.34 3.10
911 1383 4.008933 GACACTGGACCCGCTGCT 62.009 66.667 0.00 0.00 0.00 4.24
944 1419 1.533625 CCAAAGGAGTGAAATGCGGA 58.466 50.000 0.00 0.00 0.00 5.54
1131 1609 1.758514 GGCTGGGTCGGAGATGAGA 60.759 63.158 0.00 0.00 40.67 3.27
1210 1688 1.714899 GATGGGCCGACGTCAAATGG 61.715 60.000 17.16 9.61 0.00 3.16
1214 1692 2.515996 GAAGGATGGGCCGACGTCAA 62.516 60.000 17.16 0.00 43.43 3.18
1220 1698 3.849951 GCTCGAAGGATGGGCCGA 61.850 66.667 0.00 0.00 43.43 5.54
1424 1915 1.276421 AGATCACTGTCCCGAACCAAG 59.724 52.381 0.00 0.00 0.00 3.61
1426 1917 0.608130 CAGATCACTGTCCCGAACCA 59.392 55.000 0.00 0.00 39.11 3.67
1432 1923 2.187946 CCCGCAGATCACTGTCCC 59.812 66.667 0.00 0.00 45.04 4.46
1435 1926 4.457496 CGCCCCGCAGATCACTGT 62.457 66.667 0.00 0.00 45.04 3.55
1598 2107 5.044919 ACATCAATAGAAACCATGGTCCTGA 60.045 40.000 20.07 14.17 0.00 3.86
1600 2109 5.195940 CACATCAATAGAAACCATGGTCCT 58.804 41.667 20.07 19.82 0.00 3.85
1606 2133 5.185635 CACCCAACACATCAATAGAAACCAT 59.814 40.000 0.00 0.00 0.00 3.55
1760 2335 0.760567 ATCCTCTGCCCGCATGAGTA 60.761 55.000 0.00 1.66 0.00 2.59
1861 2439 3.449737 TCAACAGTTCTTACTATCCCCCG 59.550 47.826 0.00 0.00 31.96 5.73
1929 2507 1.683943 TATCCTCAGCAAAGCCATGC 58.316 50.000 3.21 3.21 46.78 4.06
1960 2538 3.480225 CGATACCGACCCGCAGGAC 62.480 68.421 0.00 0.00 46.40 3.85
1978 2556 0.036732 TGGACAGTGAAGATGGTGCC 59.963 55.000 0.00 0.00 0.00 5.01
1982 2560 4.190001 CTCAATCTGGACAGTGAAGATGG 58.810 47.826 0.00 0.41 31.11 3.51
2026 2604 1.877443 GTACCATTTGCTGTTGTCGGT 59.123 47.619 0.00 0.00 0.00 4.69
2065 2646 6.772605 ACATGATATTACCTGCAGCATAGAA 58.227 36.000 8.66 0.00 0.00 2.10
2185 2767 9.262472 GCAAAAGAATAATTAACACGACACTAG 57.738 33.333 0.00 0.00 0.00 2.57
2306 2898 9.458374 GTGAGCTAAGTTAGATATCAGAAACTC 57.542 37.037 14.27 6.93 31.15 3.01
2322 2914 5.746990 AATAGAACTGGTGTGAGCTAAGT 57.253 39.130 0.00 0.00 0.00 2.24
2323 2915 6.312426 CAGAAATAGAACTGGTGTGAGCTAAG 59.688 42.308 0.00 0.00 0.00 2.18
2342 2937 2.380064 TCCAACTTGGCCACAGAAAT 57.620 45.000 3.88 0.00 37.47 2.17
2423 3020 5.164954 GCTCTAGCACTACCATTATACAGC 58.835 45.833 0.00 0.00 41.59 4.40
2666 3266 7.321745 AGTTTTTCAAGTAGTTGTCTCCAAG 57.678 36.000 10.08 0.00 34.98 3.61
2781 3418 5.505173 TTATTAGCAAGATCAGCAAAGGC 57.495 39.130 11.97 0.00 41.61 4.35
2859 5373 5.582665 CCACTTGCAGGACTATCTAAAAGTC 59.417 44.000 1.40 0.00 42.19 3.01
3239 6047 4.468510 ACCGGAACACAATTCTAGATACCA 59.531 41.667 9.46 0.00 0.00 3.25
3306 6114 6.039047 CCGATCTCCATGAGAAATTGTCAAAT 59.961 38.462 0.00 0.00 42.27 2.32
3866 7172 2.870435 GCACCTGACTTCACGGTAACAT 60.870 50.000 0.00 0.00 0.00 2.71
3875 7181 4.898607 GGTTGGCACCTGACTTCA 57.101 55.556 0.00 0.00 40.44 3.02
3921 7227 1.741028 TCTTGGTTCCATGGACAGGA 58.259 50.000 15.91 13.35 0.00 3.86
4029 7757 2.135933 GCGATAGTCTACCACAATGGC 58.864 52.381 0.00 0.00 39.11 4.40
4046 7774 5.965922 TGAGAAGATCTGTATTTCAAGCGA 58.034 37.500 0.00 0.00 0.00 4.93
4098 7827 2.739913 TCAGCCCGAGTCAAAATAAACG 59.260 45.455 0.00 0.00 0.00 3.60
4231 7961 0.472471 AGAAAGACCGGTGGAAAGCA 59.528 50.000 14.63 0.00 0.00 3.91
4233 7963 2.742589 GCTAAGAAAGACCGGTGGAAAG 59.257 50.000 14.63 0.76 0.00 2.62
4234 7964 2.370849 AGCTAAGAAAGACCGGTGGAAA 59.629 45.455 14.63 0.00 0.00 3.13
4237 7967 2.474410 AAGCTAAGAAAGACCGGTGG 57.526 50.000 14.63 0.00 0.00 4.61
4239 7969 4.081322 TCAAAAGCTAAGAAAGACCGGT 57.919 40.909 6.92 6.92 0.00 5.28
4240 7970 5.432885 TTTCAAAAGCTAAGAAAGACCGG 57.567 39.130 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.