Multiple sequence alignment - TraesCS6D01G059000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G059000 chr6D 100.000 2948 0 0 1 2948 27709480 27706533 0.000000e+00 5445.0
1 TraesCS6D01G059000 chr6D 85.009 1114 132 13 640 1732 27666650 27665551 0.000000e+00 1099.0
2 TraesCS6D01G059000 chr6D 80.813 886 112 32 1939 2813 15175334 15174496 2.480000e-180 641.0
3 TraesCS6D01G059000 chr6D 76.375 1109 198 45 659 1732 27553750 27552671 3.340000e-149 538.0
4 TraesCS6D01G059000 chr6A 94.925 2325 96 10 640 2947 30418995 30421314 0.000000e+00 3620.0
5 TraesCS6D01G059000 chr6A 84.248 1111 133 12 640 1731 30897196 30896109 0.000000e+00 1044.0
6 TraesCS6D01G059000 chr6A 83.555 979 128 10 775 1732 30440173 30441139 0.000000e+00 885.0
7 TraesCS6D01G059000 chr6A 81.030 796 101 28 1939 2723 30895760 30895004 3.270000e-164 588.0
8 TraesCS6D01G059000 chr6A 75.733 1125 220 33 634 1727 30455172 30456274 1.570000e-142 516.0
9 TraesCS6D01G059000 chr6A 92.188 64 4 1 41 103 30418387 30418450 4.050000e-14 89.8
10 TraesCS6D01G059000 chr6B 88.984 2342 187 35 640 2948 51442358 51440055 0.000000e+00 2830.0
11 TraesCS6D01G059000 chr6B 91.221 1663 112 16 640 2284 51506972 51505326 0.000000e+00 2231.0
12 TraesCS6D01G059000 chr6B 83.244 1122 138 27 640 1732 51423402 51422302 0.000000e+00 985.0
13 TraesCS6D01G059000 chr6B 73.670 1147 227 40 634 1730 54149050 54150171 2.770000e-100 375.0
14 TraesCS6D01G059000 chr6B 87.458 295 36 1 2630 2923 51503566 51503272 3.640000e-89 339.0
15 TraesCS6D01G059000 chr6B 82.262 389 58 6 1340 1727 51310796 51310418 2.830000e-85 326.0
16 TraesCS6D01G059000 chr6B 72.326 1019 198 64 640 1598 75671037 75670043 2.940000e-60 243.0
17 TraesCS6D01G059000 chr6B 83.505 194 16 5 2455 2643 51503767 51503585 1.820000e-37 167.0
18 TraesCS6D01G059000 chr6B 89.720 107 8 2 2819 2923 45554068 45554173 1.840000e-27 134.0
19 TraesCS6D01G059000 chrUn 85.032 1109 116 23 634 1731 137670122 137671191 0.000000e+00 1083.0
20 TraesCS6D01G059000 chrUn 80.369 1085 126 52 1754 2813 137671320 137672342 0.000000e+00 743.0
21 TraesCS6D01G059000 chrUn 78.873 284 54 4 1341 1621 103309452 103309172 1.400000e-43 187.0
22 TraesCS6D01G059000 chrUn 76.022 367 69 14 634 986 112677110 112677471 3.910000e-39 172.0
23 TraesCS6D01G059000 chr1A 75.267 1124 222 38 640 1732 536811356 536810258 4.420000e-133 484.0
24 TraesCS6D01G059000 chr1D 100.000 30 0 0 1208 1237 401440020 401439991 4.100000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G059000 chr6D 27706533 27709480 2947 True 5445.000000 5445 100.000000 1 2948 1 chr6D.!!$R4 2947
1 TraesCS6D01G059000 chr6D 27665551 27666650 1099 True 1099.000000 1099 85.009000 640 1732 1 chr6D.!!$R3 1092
2 TraesCS6D01G059000 chr6D 15174496 15175334 838 True 641.000000 641 80.813000 1939 2813 1 chr6D.!!$R1 874
3 TraesCS6D01G059000 chr6D 27552671 27553750 1079 True 538.000000 538 76.375000 659 1732 1 chr6D.!!$R2 1073
4 TraesCS6D01G059000 chr6A 30418387 30421314 2927 False 1854.900000 3620 93.556500 41 2947 2 chr6A.!!$F3 2906
5 TraesCS6D01G059000 chr6A 30440173 30441139 966 False 885.000000 885 83.555000 775 1732 1 chr6A.!!$F1 957
6 TraesCS6D01G059000 chr6A 30895004 30897196 2192 True 816.000000 1044 82.639000 640 2723 2 chr6A.!!$R1 2083
7 TraesCS6D01G059000 chr6A 30455172 30456274 1102 False 516.000000 516 75.733000 634 1727 1 chr6A.!!$F2 1093
8 TraesCS6D01G059000 chr6B 51440055 51442358 2303 True 2830.000000 2830 88.984000 640 2948 1 chr6B.!!$R3 2308
9 TraesCS6D01G059000 chr6B 51422302 51423402 1100 True 985.000000 985 83.244000 640 1732 1 chr6B.!!$R2 1092
10 TraesCS6D01G059000 chr6B 51503272 51506972 3700 True 912.333333 2231 87.394667 640 2923 3 chr6B.!!$R5 2283
11 TraesCS6D01G059000 chr6B 54149050 54150171 1121 False 375.000000 375 73.670000 634 1730 1 chr6B.!!$F2 1096
12 TraesCS6D01G059000 chr6B 75670043 75671037 994 True 243.000000 243 72.326000 640 1598 1 chr6B.!!$R4 958
13 TraesCS6D01G059000 chrUn 137670122 137672342 2220 False 913.000000 1083 82.700500 634 2813 2 chrUn.!!$F2 2179
14 TraesCS6D01G059000 chr1A 536810258 536811356 1098 True 484.000000 484 75.267000 640 1732 1 chr1A.!!$R1 1092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 497 0.035458 AGCTACGTTCCTTTGCAGCT 59.965 50.0 0.0 0.0 34.63 4.24 F
568 648 0.107945 GAGCCCGCATCTCTCAACTT 60.108 55.0 0.0 0.0 0.00 2.66 F
1400 1597 0.243907 TCAGACTACTGCGTCCAAGC 59.756 55.0 0.0 0.0 43.17 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 1605 0.608130 CCATCACAGTCCGTCTTCCA 59.392 55.000 0.0 0.0 0.00 3.53 R
1441 1638 2.035066 GTGCAACAGTTCTTTCCAGCAT 59.965 45.455 0.0 0.0 36.32 3.79 R
2354 2740 3.448660 ACCTTTGCTTTGCTGAGTTTCTT 59.551 39.130 0.0 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 124 5.853572 AAAAAGTACTCCCCCATCTGTAA 57.146 39.130 0.00 0.00 0.00 2.41
123 125 5.853572 AAAAGTACTCCCCCATCTGTAAA 57.146 39.130 0.00 0.00 0.00 2.01
124 126 6.402981 AAAAGTACTCCCCCATCTGTAAAT 57.597 37.500 0.00 0.00 0.00 1.40
125 127 7.519347 AAAAGTACTCCCCCATCTGTAAATA 57.481 36.000 0.00 0.00 0.00 1.40
126 128 7.519347 AAAGTACTCCCCCATCTGTAAATAA 57.481 36.000 0.00 0.00 0.00 1.40
127 129 7.707467 AAGTACTCCCCCATCTGTAAATAAT 57.293 36.000 0.00 0.00 0.00 1.28
128 130 7.707467 AGTACTCCCCCATCTGTAAATAATT 57.293 36.000 0.00 0.00 0.00 1.40
129 131 8.808240 AGTACTCCCCCATCTGTAAATAATTA 57.192 34.615 0.00 0.00 0.00 1.40
130 132 9.406662 AGTACTCCCCCATCTGTAAATAATTAT 57.593 33.333 0.00 0.00 0.00 1.28
136 138 9.178758 CCCCCATCTGTAAATAATTATAAGAGC 57.821 37.037 0.00 0.00 0.00 4.09
137 139 8.883731 CCCCATCTGTAAATAATTATAAGAGCG 58.116 37.037 0.00 0.00 0.00 5.03
138 140 9.436957 CCCATCTGTAAATAATTATAAGAGCGT 57.563 33.333 0.00 0.00 0.00 5.07
153 155 4.657436 AGAGCGTTAAATCACTAGGGAG 57.343 45.455 0.00 0.00 0.00 4.30
156 158 5.299782 AGAGCGTTAAATCACTAGGGAGTAG 59.700 44.000 0.00 0.00 33.32 2.57
161 163 6.761714 CGTTAAATCACTAGGGAGTAGCATTT 59.238 38.462 0.00 0.00 33.32 2.32
225 227 4.827284 AGTGATACAAGAGGTTTTTGGGTG 59.173 41.667 0.00 0.00 0.00 4.61
229 231 4.193240 ACAAGAGGTTTTTGGGTGGTAT 57.807 40.909 0.00 0.00 0.00 2.73
232 234 5.163023 ACAAGAGGTTTTTGGGTGGTATAGT 60.163 40.000 0.00 0.00 0.00 2.12
233 235 6.044637 ACAAGAGGTTTTTGGGTGGTATAGTA 59.955 38.462 0.00 0.00 0.00 1.82
235 237 7.093965 AGAGGTTTTTGGGTGGTATAGTAAA 57.906 36.000 0.00 0.00 0.00 2.01
236 238 7.173032 AGAGGTTTTTGGGTGGTATAGTAAAG 58.827 38.462 0.00 0.00 0.00 1.85
238 240 5.105635 GGTTTTTGGGTGGTATAGTAAAGCC 60.106 44.000 0.00 0.00 0.00 4.35
239 241 3.547054 TTGGGTGGTATAGTAAAGCCG 57.453 47.619 0.00 0.00 32.78 5.52
240 242 2.469952 TGGGTGGTATAGTAAAGCCGT 58.530 47.619 0.00 0.00 32.78 5.68
241 243 2.168936 TGGGTGGTATAGTAAAGCCGTG 59.831 50.000 0.00 0.00 32.78 4.94
242 244 2.169144 GGGTGGTATAGTAAAGCCGTGT 59.831 50.000 0.00 0.00 0.00 4.49
246 248 5.221303 GGTGGTATAGTAAAGCCGTGTGATA 60.221 44.000 0.00 0.00 0.00 2.15
248 250 5.221303 TGGTATAGTAAAGCCGTGTGATACC 60.221 44.000 0.00 0.00 38.58 2.73
255 257 2.736347 AGCCGTGTGATACCTTACTCT 58.264 47.619 0.00 0.00 0.00 3.24
262 264 6.216569 CGTGTGATACCTTACTCTATGCAAT 58.783 40.000 0.00 0.00 0.00 3.56
265 267 5.119279 GTGATACCTTACTCTATGCAATGCG 59.881 44.000 0.00 0.00 0.00 4.73
343 350 0.877071 CAAGAAATGGTCTGCTGCGT 59.123 50.000 0.00 0.00 36.40 5.24
380 388 3.999229 GTATGCACGAAGACAAGAAGG 57.001 47.619 0.00 0.00 0.00 3.46
381 389 2.839486 ATGCACGAAGACAAGAAGGA 57.161 45.000 0.00 0.00 0.00 3.36
383 391 2.912771 TGCACGAAGACAAGAAGGAAA 58.087 42.857 0.00 0.00 0.00 3.13
384 392 2.872245 TGCACGAAGACAAGAAGGAAAG 59.128 45.455 0.00 0.00 0.00 2.62
386 394 3.059529 GCACGAAGACAAGAAGGAAAGTC 60.060 47.826 0.00 0.00 0.00 3.01
387 395 4.372656 CACGAAGACAAGAAGGAAAGTCT 58.627 43.478 0.00 0.00 42.72 3.24
390 469 6.144724 CACGAAGACAAGAAGGAAAGTCTAAG 59.855 42.308 0.00 0.00 40.22 2.18
409 488 8.732531 AGTCTAAGATATGATTAGCTACGTTCC 58.267 37.037 0.00 0.00 31.57 3.62
411 490 9.298250 TCTAAGATATGATTAGCTACGTTCCTT 57.702 33.333 0.00 0.00 31.57 3.36
412 491 9.915629 CTAAGATATGATTAGCTACGTTCCTTT 57.084 33.333 0.00 0.00 0.00 3.11
413 492 8.594881 AAGATATGATTAGCTACGTTCCTTTG 57.405 34.615 0.00 0.00 0.00 2.77
414 493 6.647067 AGATATGATTAGCTACGTTCCTTTGC 59.353 38.462 0.00 0.00 0.00 3.68
416 495 3.932710 TGATTAGCTACGTTCCTTTGCAG 59.067 43.478 0.00 0.00 0.00 4.41
418 497 0.035458 AGCTACGTTCCTTTGCAGCT 59.965 50.000 0.00 0.00 34.63 4.24
419 498 0.444260 GCTACGTTCCTTTGCAGCTC 59.556 55.000 0.00 0.00 0.00 4.09
420 499 1.941668 GCTACGTTCCTTTGCAGCTCT 60.942 52.381 0.00 0.00 0.00 4.09
421 500 2.674177 GCTACGTTCCTTTGCAGCTCTA 60.674 50.000 0.00 0.00 0.00 2.43
423 502 2.350522 ACGTTCCTTTGCAGCTCTATG 58.649 47.619 0.00 0.00 0.00 2.23
425 504 2.744202 CGTTCCTTTGCAGCTCTATGTT 59.256 45.455 0.00 0.00 0.00 2.71
426 505 3.425359 CGTTCCTTTGCAGCTCTATGTTG 60.425 47.826 0.00 0.00 0.00 3.33
427 506 3.423539 TCCTTTGCAGCTCTATGTTGT 57.576 42.857 0.00 0.00 0.00 3.32
428 507 3.754965 TCCTTTGCAGCTCTATGTTGTT 58.245 40.909 0.00 0.00 0.00 2.83
429 508 4.144297 TCCTTTGCAGCTCTATGTTGTTT 58.856 39.130 0.00 0.00 0.00 2.83
430 509 4.584325 TCCTTTGCAGCTCTATGTTGTTTT 59.416 37.500 0.00 0.00 0.00 2.43
431 510 4.682860 CCTTTGCAGCTCTATGTTGTTTTG 59.317 41.667 0.00 0.00 0.00 2.44
433 512 4.754372 TGCAGCTCTATGTTGTTTTGAG 57.246 40.909 0.00 0.00 0.00 3.02
434 513 4.136796 TGCAGCTCTATGTTGTTTTGAGT 58.863 39.130 0.00 0.00 0.00 3.41
435 514 5.304778 TGCAGCTCTATGTTGTTTTGAGTA 58.695 37.500 0.00 0.00 0.00 2.59
436 515 5.939883 TGCAGCTCTATGTTGTTTTGAGTAT 59.060 36.000 0.00 0.00 0.00 2.12
437 516 6.430925 TGCAGCTCTATGTTGTTTTGAGTATT 59.569 34.615 0.00 0.00 0.00 1.89
438 517 7.040478 TGCAGCTCTATGTTGTTTTGAGTATTT 60.040 33.333 0.00 0.00 0.00 1.40
439 518 7.809806 GCAGCTCTATGTTGTTTTGAGTATTTT 59.190 33.333 0.00 0.00 0.00 1.82
440 519 9.683069 CAGCTCTATGTTGTTTTGAGTATTTTT 57.317 29.630 0.00 0.00 0.00 1.94
458 537 1.124462 TTTTGTTTCGGCAATTCGCG 58.876 45.000 0.00 0.00 43.84 5.87
459 538 0.308068 TTTGTTTCGGCAATTCGCGA 59.692 45.000 3.71 3.71 43.84 5.87
469 548 4.859798 TCGGCAATTCGCGAATTTTAAAAT 59.140 33.333 37.26 17.84 43.84 1.82
470 549 4.949104 CGGCAATTCGCGAATTTTAAAATG 59.051 37.500 37.26 27.27 43.84 2.32
471 550 5.443955 CGGCAATTCGCGAATTTTAAAATGT 60.444 36.000 37.26 16.43 43.84 2.71
474 553 7.201140 GGCAATTCGCGAATTTTAAAATGTTTG 60.201 33.333 37.26 25.48 43.84 2.93
476 555 5.830900 TCGCGAATTTTAAAATGTTTGGG 57.169 34.783 14.04 11.80 0.00 4.12
477 556 4.150804 TCGCGAATTTTAAAATGTTTGGGC 59.849 37.500 14.04 10.00 0.00 5.36
478 557 4.151512 CGCGAATTTTAAAATGTTTGGGCT 59.848 37.500 14.04 0.00 0.00 5.19
479 558 5.617609 GCGAATTTTAAAATGTTTGGGCTC 58.382 37.500 14.04 4.85 0.00 4.70
480 559 5.667644 GCGAATTTTAAAATGTTTGGGCTCG 60.668 40.000 14.04 15.86 0.00 5.03
481 560 5.404066 CGAATTTTAAAATGTTTGGGCTCGT 59.596 36.000 14.04 0.00 0.00 4.18
482 561 6.074034 CGAATTTTAAAATGTTTGGGCTCGTT 60.074 34.615 14.04 0.00 0.00 3.85
504 584 1.220477 GCCTCAGTCTCCAGCCTTC 59.780 63.158 0.00 0.00 0.00 3.46
517 597 1.975327 GCCTTCTTTTGGGCTTCCC 59.025 57.895 0.00 0.00 44.48 3.97
521 601 2.705658 CCTTCTTTTGGGCTTCCCTTTT 59.294 45.455 3.27 0.00 45.70 2.27
522 602 3.494924 CCTTCTTTTGGGCTTCCCTTTTG 60.495 47.826 3.27 0.00 45.70 2.44
523 603 3.039252 TCTTTTGGGCTTCCCTTTTGA 57.961 42.857 3.27 0.00 45.70 2.69
524 604 2.965147 TCTTTTGGGCTTCCCTTTTGAG 59.035 45.455 3.27 0.00 45.70 3.02
525 605 1.047801 TTTGGGCTTCCCTTTTGAGC 58.952 50.000 3.27 0.00 45.70 4.26
526 606 0.188342 TTGGGCTTCCCTTTTGAGCT 59.812 50.000 3.27 0.00 45.70 4.09
527 607 1.072266 TGGGCTTCCCTTTTGAGCTA 58.928 50.000 3.27 0.00 45.70 3.32
530 610 2.302260 GGCTTCCCTTTTGAGCTATCC 58.698 52.381 0.00 0.00 36.66 2.59
531 611 2.092158 GGCTTCCCTTTTGAGCTATCCT 60.092 50.000 0.00 0.00 36.66 3.24
532 612 3.625853 GCTTCCCTTTTGAGCTATCCTT 58.374 45.455 0.00 0.00 33.72 3.36
533 613 3.629855 GCTTCCCTTTTGAGCTATCCTTC 59.370 47.826 0.00 0.00 33.72 3.46
535 615 5.504853 CTTCCCTTTTGAGCTATCCTTCTT 58.495 41.667 0.00 0.00 0.00 2.52
536 616 5.104259 TCCCTTTTGAGCTATCCTTCTTC 57.896 43.478 0.00 0.00 0.00 2.87
537 617 4.536090 TCCCTTTTGAGCTATCCTTCTTCA 59.464 41.667 0.00 0.00 0.00 3.02
538 618 5.192522 TCCCTTTTGAGCTATCCTTCTTCAT 59.807 40.000 0.00 0.00 0.00 2.57
539 619 5.890419 CCCTTTTGAGCTATCCTTCTTCATT 59.110 40.000 0.00 0.00 0.00 2.57
540 620 6.183360 CCCTTTTGAGCTATCCTTCTTCATTG 60.183 42.308 0.00 0.00 0.00 2.82
541 621 6.376581 CCTTTTGAGCTATCCTTCTTCATTGT 59.623 38.462 0.00 0.00 0.00 2.71
542 622 6.992063 TTTGAGCTATCCTTCTTCATTGTC 57.008 37.500 0.00 0.00 0.00 3.18
543 623 5.682234 TGAGCTATCCTTCTTCATTGTCA 57.318 39.130 0.00 0.00 0.00 3.58
544 624 5.423015 TGAGCTATCCTTCTTCATTGTCAC 58.577 41.667 0.00 0.00 0.00 3.67
545 625 4.437239 AGCTATCCTTCTTCATTGTCACG 58.563 43.478 0.00 0.00 0.00 4.35
546 626 4.081420 AGCTATCCTTCTTCATTGTCACGT 60.081 41.667 0.00 0.00 0.00 4.49
547 627 4.631813 GCTATCCTTCTTCATTGTCACGTT 59.368 41.667 0.00 0.00 0.00 3.99
548 628 5.220491 GCTATCCTTCTTCATTGTCACGTTC 60.220 44.000 0.00 0.00 0.00 3.95
549 629 3.057019 TCCTTCTTCATTGTCACGTTCG 58.943 45.455 0.00 0.00 0.00 3.95
550 630 3.057019 CCTTCTTCATTGTCACGTTCGA 58.943 45.455 0.00 0.00 0.00 3.71
551 631 3.121944 CCTTCTTCATTGTCACGTTCGAG 59.878 47.826 0.00 0.00 0.00 4.04
552 632 2.058798 TCTTCATTGTCACGTTCGAGC 58.941 47.619 0.00 0.00 0.00 5.03
553 633 1.126846 CTTCATTGTCACGTTCGAGCC 59.873 52.381 0.00 0.00 0.00 4.70
554 634 0.669318 TCATTGTCACGTTCGAGCCC 60.669 55.000 0.00 0.00 0.00 5.19
555 635 1.736645 ATTGTCACGTTCGAGCCCG 60.737 57.895 0.00 0.00 37.07 6.13
558 638 4.063967 TCACGTTCGAGCCCGCAT 62.064 61.111 0.00 0.00 35.37 4.73
559 639 3.554692 CACGTTCGAGCCCGCATC 61.555 66.667 0.00 0.00 35.37 3.91
560 640 3.760035 ACGTTCGAGCCCGCATCT 61.760 61.111 0.00 0.00 35.37 2.90
561 641 2.956964 CGTTCGAGCCCGCATCTC 60.957 66.667 0.00 0.00 35.37 2.75
562 642 2.496817 GTTCGAGCCCGCATCTCT 59.503 61.111 0.00 0.00 35.37 3.10
563 643 1.590259 GTTCGAGCCCGCATCTCTC 60.590 63.158 0.00 0.00 35.37 3.20
564 644 2.052104 TTCGAGCCCGCATCTCTCA 61.052 57.895 0.00 0.00 35.37 3.27
565 645 1.604147 TTCGAGCCCGCATCTCTCAA 61.604 55.000 0.00 0.00 35.37 3.02
566 646 1.880340 CGAGCCCGCATCTCTCAAC 60.880 63.158 0.00 0.00 0.00 3.18
567 647 1.519719 GAGCCCGCATCTCTCAACT 59.480 57.895 0.00 0.00 0.00 3.16
568 648 0.107945 GAGCCCGCATCTCTCAACTT 60.108 55.000 0.00 0.00 0.00 2.66
569 649 0.107945 AGCCCGCATCTCTCAACTTC 60.108 55.000 0.00 0.00 0.00 3.01
570 650 0.391661 GCCCGCATCTCTCAACTTCA 60.392 55.000 0.00 0.00 0.00 3.02
571 651 1.363744 CCCGCATCTCTCAACTTCAC 58.636 55.000 0.00 0.00 0.00 3.18
572 652 1.066573 CCCGCATCTCTCAACTTCACT 60.067 52.381 0.00 0.00 0.00 3.41
573 653 2.266554 CCGCATCTCTCAACTTCACTC 58.733 52.381 0.00 0.00 0.00 3.51
574 654 2.094286 CCGCATCTCTCAACTTCACTCT 60.094 50.000 0.00 0.00 0.00 3.24
591 671 0.543883 TCTTCCAGTCCAGCAGAGCT 60.544 55.000 0.00 0.00 40.77 4.09
617 706 1.145819 GTGAGGAGATGAGCAGCCC 59.854 63.158 0.00 0.00 0.00 5.19
870 1016 2.202703 CGCCCTACACACCTACGC 60.203 66.667 0.00 0.00 0.00 4.42
1028 1190 4.299547 AGCGGTGCTTCGTGCTGA 62.300 61.111 0.00 0.00 43.37 4.26
1084 1255 3.788333 GCAACAGTGGCATACATCATT 57.212 42.857 0.00 0.00 0.00 2.57
1116 1288 1.423056 CTCGGTGTACTCGTCGGAC 59.577 63.158 0.00 0.00 0.00 4.79
1338 1535 0.531974 TCAACACTTGCTCCGTCACC 60.532 55.000 0.00 0.00 0.00 4.02
1400 1597 0.243907 TCAGACTACTGCGTCCAAGC 59.756 55.000 0.00 0.00 43.17 4.01
1441 1638 2.571202 TGTGATGGTGTAGCTTCATGGA 59.429 45.455 0.00 0.00 0.00 3.41
1448 1645 1.839354 TGTAGCTTCATGGATGCTGGA 59.161 47.619 14.61 1.37 41.86 3.86
1569 1766 4.216411 ACTGTGGACATTTATAGGCGTT 57.784 40.909 0.00 0.00 0.00 4.84
1755 2069 9.647918 TTTATTCTATGGATGTCAGTAGAGACT 57.352 33.333 0.00 0.00 39.27 3.24
1794 2110 7.513856 TGCTGGCCTATTGACATACTTAATTA 58.486 34.615 3.32 0.00 0.00 1.40
1795 2111 8.163408 TGCTGGCCTATTGACATACTTAATTAT 58.837 33.333 3.32 0.00 0.00 1.28
2718 4565 3.625764 TGCCGCTACAAAGTAATTGATCC 59.374 43.478 0.00 0.00 41.85 3.36
2873 4730 9.617975 GAGATAAGTTTGAACTTTTTCCATGAG 57.382 33.333 13.71 0.00 46.52 2.90
2875 4732 9.399403 GATAAGTTTGAACTTTTTCCATGAGTC 57.601 33.333 13.71 0.00 46.52 3.36
2882 4739 9.443323 TTGAACTTTTTCCATGAGTCGATATTA 57.557 29.630 0.00 0.00 0.00 0.98
2940 4797 4.704540 CAGGTACCAAGCATTACATTTCCA 59.295 41.667 15.94 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.567848 GGACAAAATTCTATATTCTCGCAAAAA 57.432 29.630 0.00 0.00 0.00 1.94
28 29 8.735315 TGGACAAAATTCTATATTCTCGCAAAA 58.265 29.630 0.00 0.00 0.00 2.44
29 30 8.275015 TGGACAAAATTCTATATTCTCGCAAA 57.725 30.769 0.00 0.00 0.00 3.68
30 31 7.857734 TGGACAAAATTCTATATTCTCGCAA 57.142 32.000 0.00 0.00 0.00 4.85
31 32 8.988934 GTATGGACAAAATTCTATATTCTCGCA 58.011 33.333 0.00 0.00 0.00 5.10
32 33 8.443937 GGTATGGACAAAATTCTATATTCTCGC 58.556 37.037 0.00 0.00 0.00 5.03
33 34 9.712305 AGGTATGGACAAAATTCTATATTCTCG 57.288 33.333 0.00 0.00 0.00 4.04
42 43 9.975218 ATGTAAACTAGGTATGGACAAAATTCT 57.025 29.630 0.00 0.00 0.00 2.40
103 105 7.707467 ATTATTTACAGATGGGGGAGTACTT 57.293 36.000 0.00 0.00 0.00 2.24
104 106 7.707467 AATTATTTACAGATGGGGGAGTACT 57.293 36.000 0.00 0.00 0.00 2.73
110 112 9.178758 GCTCTTATAATTATTTACAGATGGGGG 57.821 37.037 2.68 0.00 0.00 5.40
111 113 8.883731 CGCTCTTATAATTATTTACAGATGGGG 58.116 37.037 2.68 0.00 0.00 4.96
112 114 9.436957 ACGCTCTTATAATTATTTACAGATGGG 57.563 33.333 2.68 6.17 0.00 4.00
125 127 9.490379 CCCTAGTGATTTAACGCTCTTATAATT 57.510 33.333 0.00 0.00 32.69 1.40
126 128 8.867097 TCCCTAGTGATTTAACGCTCTTATAAT 58.133 33.333 0.00 0.00 32.69 1.28
127 129 8.241497 TCCCTAGTGATTTAACGCTCTTATAA 57.759 34.615 0.00 0.00 32.69 0.98
128 130 7.504911 ACTCCCTAGTGATTTAACGCTCTTATA 59.495 37.037 0.00 0.00 33.57 0.98
129 131 6.324254 ACTCCCTAGTGATTTAACGCTCTTAT 59.676 38.462 0.00 0.00 33.57 1.73
130 132 5.655532 ACTCCCTAGTGATTTAACGCTCTTA 59.344 40.000 0.00 0.00 33.57 2.10
131 133 4.466726 ACTCCCTAGTGATTTAACGCTCTT 59.533 41.667 0.00 0.00 33.57 2.85
132 134 4.024670 ACTCCCTAGTGATTTAACGCTCT 58.975 43.478 0.00 0.00 33.57 4.09
133 135 4.388378 ACTCCCTAGTGATTTAACGCTC 57.612 45.455 0.00 0.00 33.57 5.03
134 136 4.202131 GCTACTCCCTAGTGATTTAACGCT 60.202 45.833 0.00 0.00 36.36 5.07
135 137 4.049869 GCTACTCCCTAGTGATTTAACGC 58.950 47.826 0.00 0.00 36.36 4.84
136 138 5.258456 TGCTACTCCCTAGTGATTTAACG 57.742 43.478 0.00 0.00 36.36 3.18
137 139 8.507524 AAAATGCTACTCCCTAGTGATTTAAC 57.492 34.615 0.00 0.00 36.36 2.01
196 198 9.810545 CCAAAAACCTCTTGTATCACTTAAAAA 57.189 29.630 0.00 0.00 0.00 1.94
197 199 8.417884 CCCAAAAACCTCTTGTATCACTTAAAA 58.582 33.333 0.00 0.00 0.00 1.52
198 200 7.562088 ACCCAAAAACCTCTTGTATCACTTAAA 59.438 33.333 0.00 0.00 0.00 1.52
199 201 7.013846 CACCCAAAAACCTCTTGTATCACTTAA 59.986 37.037 0.00 0.00 0.00 1.85
200 202 6.488683 CACCCAAAAACCTCTTGTATCACTTA 59.511 38.462 0.00 0.00 0.00 2.24
201 203 5.301805 CACCCAAAAACCTCTTGTATCACTT 59.698 40.000 0.00 0.00 0.00 3.16
202 204 4.827284 CACCCAAAAACCTCTTGTATCACT 59.173 41.667 0.00 0.00 0.00 3.41
203 205 4.022329 CCACCCAAAAACCTCTTGTATCAC 60.022 45.833 0.00 0.00 0.00 3.06
221 223 2.169144 ACACGGCTTTACTATACCACCC 59.831 50.000 0.00 0.00 0.00 4.61
225 227 5.010415 AGGTATCACACGGCTTTACTATACC 59.990 44.000 0.00 0.00 38.46 2.73
229 231 5.653769 AGTAAGGTATCACACGGCTTTACTA 59.346 40.000 0.00 0.00 0.00 1.82
232 234 4.708421 AGAGTAAGGTATCACACGGCTTTA 59.292 41.667 0.00 0.00 0.00 1.85
233 235 3.514309 AGAGTAAGGTATCACACGGCTTT 59.486 43.478 0.00 0.00 0.00 3.51
235 237 2.736347 AGAGTAAGGTATCACACGGCT 58.264 47.619 0.00 0.00 0.00 5.52
236 238 4.547532 CATAGAGTAAGGTATCACACGGC 58.452 47.826 0.00 0.00 0.00 5.68
238 240 5.183014 TGCATAGAGTAAGGTATCACACG 57.817 43.478 0.00 0.00 0.00 4.49
239 241 6.073548 GCATTGCATAGAGTAAGGTATCACAC 60.074 42.308 3.15 0.00 0.00 3.82
240 242 5.991606 GCATTGCATAGAGTAAGGTATCACA 59.008 40.000 3.15 0.00 0.00 3.58
241 243 5.119279 CGCATTGCATAGAGTAAGGTATCAC 59.881 44.000 9.69 0.00 0.00 3.06
242 244 5.230182 CGCATTGCATAGAGTAAGGTATCA 58.770 41.667 9.69 0.00 0.00 2.15
246 248 2.838736 CCGCATTGCATAGAGTAAGGT 58.161 47.619 9.69 0.00 0.00 3.50
248 250 1.532868 GGCCGCATTGCATAGAGTAAG 59.467 52.381 9.69 0.00 0.00 2.34
255 257 3.342909 CGATGGCCGCATTGCATA 58.657 55.556 9.69 0.00 0.00 3.14
280 282 1.560611 CCCATGGTTCCCCTTACGTAA 59.439 52.381 11.73 7.94 0.00 3.18
281 283 1.205966 CCCATGGTTCCCCTTACGTA 58.794 55.000 11.73 0.00 0.00 3.57
295 299 2.529780 AACAATGTTGCACACCCATG 57.470 45.000 0.00 0.00 0.00 3.66
296 300 2.699846 AGAAACAATGTTGCACACCCAT 59.300 40.909 6.89 0.00 0.00 4.00
297 301 2.106566 AGAAACAATGTTGCACACCCA 58.893 42.857 6.89 0.00 0.00 4.51
303 310 4.825422 TGGACAAAAGAAACAATGTTGCA 58.175 34.783 6.89 0.00 0.00 4.08
338 345 3.414700 GTGGCCTCGTGAACGCAG 61.415 66.667 3.32 0.00 39.60 5.18
341 348 3.934391 GAGGGTGGCCTCGTGAACG 62.934 68.421 3.32 0.00 41.45 3.95
363 371 2.613026 TTCCTTCTTGTCTTCGTGCA 57.387 45.000 0.00 0.00 0.00 4.57
369 377 9.883142 CATATCTTAGACTTTCCTTCTTGTCTT 57.117 33.333 0.00 0.00 39.94 3.01
370 378 9.261035 TCATATCTTAGACTTTCCTTCTTGTCT 57.739 33.333 0.00 0.00 41.81 3.41
379 387 9.562583 CGTAGCTAATCATATCTTAGACTTTCC 57.437 37.037 0.00 0.00 0.00 3.13
383 391 8.732531 GGAACGTAGCTAATCATATCTTAGACT 58.267 37.037 0.00 5.43 0.00 3.24
384 392 8.732531 AGGAACGTAGCTAATCATATCTTAGAC 58.267 37.037 0.00 0.00 0.00 2.59
386 394 9.915629 AAAGGAACGTAGCTAATCATATCTTAG 57.084 33.333 0.00 0.00 0.00 2.18
387 395 9.692749 CAAAGGAACGTAGCTAATCATATCTTA 57.307 33.333 0.00 0.00 0.00 2.10
390 469 6.423905 TGCAAAGGAACGTAGCTAATCATATC 59.576 38.462 0.00 0.00 0.00 1.63
398 477 1.275291 AGCTGCAAAGGAACGTAGCTA 59.725 47.619 3.46 0.00 39.50 3.32
404 483 2.350522 ACATAGAGCTGCAAAGGAACG 58.649 47.619 1.02 0.00 0.00 3.95
409 488 5.522456 TCAAAACAACATAGAGCTGCAAAG 58.478 37.500 1.02 0.00 0.00 2.77
411 490 4.580167 ACTCAAAACAACATAGAGCTGCAA 59.420 37.500 1.02 0.00 0.00 4.08
412 491 4.136796 ACTCAAAACAACATAGAGCTGCA 58.863 39.130 1.02 0.00 0.00 4.41
413 492 4.756084 ACTCAAAACAACATAGAGCTGC 57.244 40.909 0.00 0.00 0.00 5.25
414 493 9.683069 AAAAATACTCAAAACAACATAGAGCTG 57.317 29.630 0.00 0.00 0.00 4.24
438 517 1.518929 CGCGAATTGCCGAAACAAAAA 59.481 42.857 0.00 0.00 42.08 1.94
439 518 1.124462 CGCGAATTGCCGAAACAAAA 58.876 45.000 0.00 0.00 42.08 2.44
440 519 0.308068 TCGCGAATTGCCGAAACAAA 59.692 45.000 6.20 0.00 42.08 2.83
441 520 0.308068 TTCGCGAATTGCCGAAACAA 59.692 45.000 19.38 0.00 42.08 2.83
445 524 2.339728 AAAATTCGCGAATTGCCGAA 57.660 40.000 39.07 11.62 40.57 4.30
446 525 3.473093 TTAAAATTCGCGAATTGCCGA 57.527 38.095 39.07 24.97 40.57 5.54
447 526 4.554162 TTTTAAAATTCGCGAATTGCCG 57.446 36.364 39.07 0.00 40.57 5.69
449 528 7.201140 CCAAACATTTTAAAATTCGCGAATTGC 60.201 33.333 39.07 0.00 40.57 3.56
450 529 7.268023 CCCAAACATTTTAAAATTCGCGAATTG 59.732 33.333 39.07 29.12 40.57 2.32
451 530 7.294473 CCCAAACATTTTAAAATTCGCGAATT 58.706 30.769 34.99 34.99 42.35 2.17
452 531 6.619660 GCCCAAACATTTTAAAATTCGCGAAT 60.620 34.615 27.94 27.94 0.00 3.34
456 535 5.605564 AGCCCAAACATTTTAAAATTCGC 57.394 34.783 10.77 6.61 0.00 4.70
458 537 6.779115 ACGAGCCCAAACATTTTAAAATTC 57.221 33.333 10.77 3.30 0.00 2.17
459 538 7.413644 CAAACGAGCCCAAACATTTTAAAATT 58.586 30.769 10.77 0.00 0.00 1.82
469 548 2.494530 GCCCAAACGAGCCCAAACA 61.495 57.895 0.00 0.00 0.00 2.83
470 549 2.338620 GCCCAAACGAGCCCAAAC 59.661 61.111 0.00 0.00 0.00 2.93
471 550 2.915137 GGCCCAAACGAGCCCAAA 60.915 61.111 0.00 0.00 43.76 3.28
476 555 2.032681 ACTGAGGCCCAAACGAGC 59.967 61.111 0.00 0.00 0.00 5.03
477 556 0.390472 GAGACTGAGGCCCAAACGAG 60.390 60.000 0.00 0.00 0.00 4.18
478 557 1.671742 GAGACTGAGGCCCAAACGA 59.328 57.895 0.00 0.00 0.00 3.85
479 558 1.376037 GGAGACTGAGGCCCAAACG 60.376 63.158 0.00 0.00 0.00 3.60
480 559 0.322008 CTGGAGACTGAGGCCCAAAC 60.322 60.000 0.00 0.00 0.00 2.93
481 560 2.069776 CTGGAGACTGAGGCCCAAA 58.930 57.895 0.00 0.00 0.00 3.28
482 561 2.596851 GCTGGAGACTGAGGCCCAA 61.597 63.158 0.00 0.00 0.00 4.12
488 567 3.072944 CAAAAGAAGGCTGGAGACTGAG 58.927 50.000 0.00 0.00 30.66 3.35
489 568 2.224621 CCAAAAGAAGGCTGGAGACTGA 60.225 50.000 0.00 0.00 30.66 3.41
517 597 7.120285 TGACAATGAAGAAGGATAGCTCAAAAG 59.880 37.037 0.00 0.00 0.00 2.27
521 601 5.423015 GTGACAATGAAGAAGGATAGCTCA 58.577 41.667 0.00 0.00 0.00 4.26
522 602 4.505922 CGTGACAATGAAGAAGGATAGCTC 59.494 45.833 0.00 0.00 0.00 4.09
523 603 4.081420 ACGTGACAATGAAGAAGGATAGCT 60.081 41.667 0.00 0.00 0.00 3.32
524 604 4.184629 ACGTGACAATGAAGAAGGATAGC 58.815 43.478 0.00 0.00 0.00 2.97
525 605 5.004821 CGAACGTGACAATGAAGAAGGATAG 59.995 44.000 0.00 0.00 0.00 2.08
526 606 4.862574 CGAACGTGACAATGAAGAAGGATA 59.137 41.667 0.00 0.00 0.00 2.59
527 607 3.679980 CGAACGTGACAATGAAGAAGGAT 59.320 43.478 0.00 0.00 0.00 3.24
530 610 3.422343 GCTCGAACGTGACAATGAAGAAG 60.422 47.826 0.00 0.00 0.00 2.85
531 611 2.475111 GCTCGAACGTGACAATGAAGAA 59.525 45.455 0.00 0.00 0.00 2.52
532 612 2.058798 GCTCGAACGTGACAATGAAGA 58.941 47.619 0.00 0.00 0.00 2.87
533 613 1.126846 GGCTCGAACGTGACAATGAAG 59.873 52.381 0.00 0.00 0.00 3.02
535 615 0.669318 GGGCTCGAACGTGACAATGA 60.669 55.000 4.63 0.00 0.00 2.57
536 616 1.787847 GGGCTCGAACGTGACAATG 59.212 57.895 4.63 0.00 0.00 2.82
537 617 1.736645 CGGGCTCGAACGTGACAAT 60.737 57.895 0.00 0.00 39.00 2.71
538 618 2.355363 CGGGCTCGAACGTGACAA 60.355 61.111 0.00 0.00 39.00 3.18
541 621 3.982372 GATGCGGGCTCGAACGTGA 62.982 63.158 12.03 0.00 39.00 4.35
542 622 3.554692 GATGCGGGCTCGAACGTG 61.555 66.667 12.03 0.00 39.00 4.49
543 623 3.701604 GAGATGCGGGCTCGAACGT 62.702 63.158 12.03 0.00 39.00 3.99
544 624 2.956964 GAGATGCGGGCTCGAACG 60.957 66.667 12.03 0.00 39.00 3.95
545 625 1.590259 GAGAGATGCGGGCTCGAAC 60.590 63.158 12.03 0.00 39.00 3.95
546 626 1.604147 TTGAGAGATGCGGGCTCGAA 61.604 55.000 12.03 0.00 39.00 3.71
547 627 2.052104 TTGAGAGATGCGGGCTCGA 61.052 57.895 12.03 0.00 39.00 4.04
548 628 1.880340 GTTGAGAGATGCGGGCTCG 60.880 63.158 0.00 0.00 37.46 5.03
549 629 0.107945 AAGTTGAGAGATGCGGGCTC 60.108 55.000 0.00 0.00 0.00 4.70
550 630 0.107945 GAAGTTGAGAGATGCGGGCT 60.108 55.000 0.00 0.00 0.00 5.19
551 631 0.391661 TGAAGTTGAGAGATGCGGGC 60.392 55.000 0.00 0.00 0.00 6.13
552 632 1.066573 AGTGAAGTTGAGAGATGCGGG 60.067 52.381 0.00 0.00 0.00 6.13
553 633 2.094286 AGAGTGAAGTTGAGAGATGCGG 60.094 50.000 0.00 0.00 0.00 5.69
554 634 3.229276 AGAGTGAAGTTGAGAGATGCG 57.771 47.619 0.00 0.00 0.00 4.73
555 635 3.932089 GGAAGAGTGAAGTTGAGAGATGC 59.068 47.826 0.00 0.00 0.00 3.91
556 636 5.144692 TGGAAGAGTGAAGTTGAGAGATG 57.855 43.478 0.00 0.00 0.00 2.90
557 637 4.837860 ACTGGAAGAGTGAAGTTGAGAGAT 59.162 41.667 0.00 0.00 37.43 2.75
558 638 4.219115 ACTGGAAGAGTGAAGTTGAGAGA 58.781 43.478 0.00 0.00 37.43 3.10
559 639 4.555262 GACTGGAAGAGTGAAGTTGAGAG 58.445 47.826 0.00 0.00 37.43 3.20
560 640 3.322254 GGACTGGAAGAGTGAAGTTGAGA 59.678 47.826 0.00 0.00 37.43 3.27
561 641 3.070159 TGGACTGGAAGAGTGAAGTTGAG 59.930 47.826 0.00 0.00 37.43 3.02
562 642 3.038280 TGGACTGGAAGAGTGAAGTTGA 58.962 45.455 0.00 0.00 37.43 3.18
563 643 3.397482 CTGGACTGGAAGAGTGAAGTTG 58.603 50.000 0.00 0.00 37.43 3.16
564 644 2.224402 GCTGGACTGGAAGAGTGAAGTT 60.224 50.000 0.00 0.00 37.43 2.66
565 645 1.346068 GCTGGACTGGAAGAGTGAAGT 59.654 52.381 0.00 0.00 37.43 3.01
566 646 1.345741 TGCTGGACTGGAAGAGTGAAG 59.654 52.381 0.00 0.00 37.43 3.02
567 647 1.345741 CTGCTGGACTGGAAGAGTGAA 59.654 52.381 0.00 0.00 37.43 3.18
568 648 0.972134 CTGCTGGACTGGAAGAGTGA 59.028 55.000 0.00 0.00 37.43 3.41
569 649 0.972134 TCTGCTGGACTGGAAGAGTG 59.028 55.000 0.00 0.00 37.43 3.51
570 650 1.265236 CTCTGCTGGACTGGAAGAGT 58.735 55.000 0.00 0.00 37.43 3.24
571 651 0.108233 GCTCTGCTGGACTGGAAGAG 60.108 60.000 0.00 0.00 39.01 2.85
572 652 0.543883 AGCTCTGCTGGACTGGAAGA 60.544 55.000 0.00 0.00 37.57 2.87
573 653 0.108233 GAGCTCTGCTGGACTGGAAG 60.108 60.000 6.43 0.00 39.88 3.46
574 654 1.881903 CGAGCTCTGCTGGACTGGAA 61.882 60.000 12.85 0.00 39.88 3.53
591 671 0.751643 TCATCTCCTCACCGATGCGA 60.752 55.000 0.00 0.00 37.52 5.10
1028 1190 2.764637 GAAATGGTGGGGCACTCCGT 62.765 60.000 3.01 0.00 35.46 4.69
1036 1198 0.178935 ACAACCTGGAAATGGTGGGG 60.179 55.000 0.00 0.00 37.93 4.96
1071 1233 2.092267 AGCCTGTGAATGATGTATGCCA 60.092 45.455 0.00 0.00 0.00 4.92
1116 1288 3.201290 GAGATTGCTCCATACACCAGTG 58.799 50.000 0.00 0.00 35.01 3.66
1338 1535 2.588877 CCCTCTGCCCGCATAACG 60.589 66.667 0.00 0.00 43.15 3.18
1362 1559 3.045634 TGACAGGAAGAGGAAACCAAGA 58.954 45.455 0.00 0.00 0.00 3.02
1400 1597 1.276421 AGTCCGTCTTCCACTTCCATG 59.724 52.381 0.00 0.00 0.00 3.66
1408 1605 0.608130 CCATCACAGTCCGTCTTCCA 59.392 55.000 0.00 0.00 0.00 3.53
1441 1638 2.035066 GTGCAACAGTTCTTTCCAGCAT 59.965 45.455 0.00 0.00 36.32 3.79
1448 1645 6.234177 AGCTTATCTAGTGCAACAGTTCTTT 58.766 36.000 0.00 0.00 41.43 2.52
1569 1766 4.177537 TGATTCAAACTGGACCTGGAAA 57.822 40.909 0.00 0.00 0.00 3.13
2346 2730 6.697019 TGCTTTGCTGAGTTTCTTACAAATTC 59.303 34.615 0.00 0.00 0.00 2.17
2354 2740 3.448660 ACCTTTGCTTTGCTGAGTTTCTT 59.551 39.130 0.00 0.00 0.00 2.52
2718 4565 8.465999 CATTATATAGAGAGAACAGCAGTAGGG 58.534 40.741 0.00 0.00 0.00 3.53
2873 4730 5.986135 AGCCAGACTGATTTGTAATATCGAC 59.014 40.000 3.32 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.