Multiple sequence alignment - TraesCS6D01G048400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G048400 chr6D 100.000 3812 0 0 1 3812 23393123 23396934 0.000000e+00 7040.0
1 TraesCS6D01G048400 chr6D 95.323 449 16 1 1 449 463049029 463049472 0.000000e+00 708.0
2 TraesCS6D01G048400 chr6D 91.051 447 28 3 3 446 364907546 364907983 9.120000e-166 593.0
3 TraesCS6D01G048400 chr6D 91.837 147 8 2 592 735 23358757 23358902 6.460000e-48 202.0
4 TraesCS6D01G048400 chr6D 91.837 147 8 2 592 735 23373269 23373414 6.460000e-48 202.0
5 TraesCS6D01G048400 chr6D 76.375 309 56 14 3124 3424 6770967 6770668 2.370000e-32 150.0
6 TraesCS6D01G048400 chr6B 93.380 1284 67 10 1607 2877 37313230 37311952 0.000000e+00 1884.0
7 TraesCS6D01G048400 chr6B 89.390 754 58 11 840 1582 37313966 37313224 0.000000e+00 929.0
8 TraesCS6D01G048400 chr6B 87.864 206 11 6 507 702 37314257 37314056 2.960000e-56 230.0
9 TraesCS6D01G048400 chr6A 94.389 1212 58 4 1607 2808 22168953 22170164 0.000000e+00 1853.0
10 TraesCS6D01G048400 chr6A 87.744 767 56 19 832 1582 22168215 22168959 0.000000e+00 861.0
11 TraesCS6D01G048400 chr6A 85.772 246 20 8 508 744 22167915 22168154 2.940000e-61 246.0
12 TraesCS6D01G048400 chr6A 80.426 235 23 10 799 1033 22157050 22157261 1.420000e-34 158.0
13 TraesCS6D01G048400 chr1D 95.418 502 10 5 1 496 78360492 78359998 0.000000e+00 787.0
14 TraesCS6D01G048400 chr4A 94.477 507 13 3 1 497 690157520 690158021 0.000000e+00 767.0
15 TraesCS6D01G048400 chr2A 96.552 406 9 1 1 406 14905729 14906129 0.000000e+00 667.0
16 TraesCS6D01G048400 chr2A 93.528 309 13 6 103 411 191881965 191882266 1.610000e-123 453.0
17 TraesCS6D01G048400 chr2A 95.000 120 6 0 1 120 191881808 191881927 5.030000e-44 189.0
18 TraesCS6D01G048400 chr2A 84.865 185 25 2 32 216 59716187 59716006 2.340000e-42 183.0
19 TraesCS6D01G048400 chr2A 76.613 248 40 13 3123 3358 142398648 142398407 1.860000e-23 121.0
20 TraesCS6D01G048400 chr7D 89.904 208 13 3 242 446 162882288 162882086 1.050000e-65 261.0
21 TraesCS6D01G048400 chr7D 92.000 150 6 2 3 150 162971507 162971362 4.990000e-49 206.0
22 TraesCS6D01G048400 chr7A 81.057 227 41 2 1636 1861 26326168 26325943 3.030000e-41 180.0
23 TraesCS6D01G048400 chr1B 75.661 378 55 15 100 446 587703291 587703662 1.830000e-33 154.0
24 TraesCS6D01G048400 chr5D 84.000 75 10 2 3246 3320 549304880 549304952 1.900000e-08 71.3
25 TraesCS6D01G048400 chr7B 96.875 32 1 0 409 440 709089074 709089043 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G048400 chr6D 23393123 23396934 3811 False 7040.000000 7040 100.000000 1 3812 1 chr6D.!!$F3 3811
1 TraesCS6D01G048400 chr6B 37311952 37314257 2305 True 1014.333333 1884 90.211333 507 2877 3 chr6B.!!$R1 2370
2 TraesCS6D01G048400 chr6A 22167915 22170164 2249 False 986.666667 1853 89.301667 508 2808 3 chr6A.!!$F2 2300
3 TraesCS6D01G048400 chr4A 690157520 690158021 501 False 767.000000 767 94.477000 1 497 1 chr4A.!!$F1 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
786 810 0.035317 ACACCATCACGTGCATGTCT 59.965 50.0 11.67 0.00 37.25 3.41 F
794 818 0.106708 ACGTGCATGTCTCAGTTGGT 59.893 50.0 5.51 0.00 0.00 3.67 F
807 831 0.108585 AGTTGGTTCATGCCGACACT 59.891 50.0 11.18 0.00 43.72 3.55 F
1898 1944 0.246086 AACGAGCTTCCTCTCTGCAG 59.754 55.0 7.63 7.63 35.90 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1878 1924 0.037882 TGCAGAGAGGAAGCTCGTTG 60.038 55.0 0.0 0.0 39.87 4.10 R
2778 2836 1.063951 CAACTCGCACGTCGTCTACC 61.064 60.0 0.0 0.0 39.67 3.18 R
2786 2844 1.365699 ACAAAGTTCAACTCGCACGT 58.634 45.0 0.0 0.0 0.00 4.49 R
2990 3049 0.040958 AAACAAAAGCAGAGCGAGCG 60.041 50.0 0.0 0.0 37.01 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.483307 CATGGTTGGTGGAGAAACATATTTAG 58.517 38.462 0.00 0.00 29.39 1.85
74 75 7.280205 GGAGAAACATATTTAGAGGAAAGCGAA 59.720 37.037 0.00 0.00 0.00 4.70
173 174 9.899226 GATATATGTTCCCAGAAATAAGTTTGC 57.101 33.333 0.00 0.00 0.00 3.68
299 300 6.313411 ACAACAAAACAATTGACAAGGTGATG 59.687 34.615 13.59 8.31 0.00 3.07
300 301 5.358922 ACAAAACAATTGACAAGGTGATGG 58.641 37.500 13.59 0.00 0.00 3.51
338 339 6.951062 TGATGTATAGACAGAGAAGGTGAG 57.049 41.667 0.00 0.00 39.50 3.51
339 340 5.830457 TGATGTATAGACAGAGAAGGTGAGG 59.170 44.000 0.00 0.00 39.50 3.86
340 341 5.194473 TGTATAGACAGAGAAGGTGAGGT 57.806 43.478 0.00 0.00 0.00 3.85
341 342 4.950475 TGTATAGACAGAGAAGGTGAGGTG 59.050 45.833 0.00 0.00 0.00 4.00
342 343 2.685106 AGACAGAGAAGGTGAGGTGA 57.315 50.000 0.00 0.00 0.00 4.02
438 439 4.527509 TTGTGTTGTGGTTGAACATTGT 57.472 36.364 0.00 0.00 35.81 2.71
445 446 5.843673 TGTGGTTGAACATTGTGTGTAAT 57.156 34.783 0.00 0.00 41.14 1.89
449 450 4.038642 GGTTGAACATTGTGTGTAATGGGT 59.961 41.667 0.00 0.00 41.14 4.51
452 453 4.277174 TGAACATTGTGTGTAATGGGTGAC 59.723 41.667 0.00 0.00 41.14 3.67
500 510 3.576648 GACGGGCAGTCTATAGTAATGC 58.423 50.000 10.66 14.27 46.13 3.56
501 511 3.231818 ACGGGCAGTCTATAGTAATGCT 58.768 45.455 18.92 4.71 37.08 3.79
502 512 4.404640 ACGGGCAGTCTATAGTAATGCTA 58.595 43.478 18.92 0.00 37.08 3.49
503 513 4.459685 ACGGGCAGTCTATAGTAATGCTAG 59.540 45.833 18.92 16.06 37.08 3.42
504 514 4.459685 CGGGCAGTCTATAGTAATGCTAGT 59.540 45.833 18.92 0.00 37.08 2.57
505 515 5.620205 CGGGCAGTCTATAGTAATGCTAGTG 60.620 48.000 18.92 6.30 37.08 2.74
506 516 5.164954 GGCAGTCTATAGTAATGCTAGTGC 58.835 45.833 18.92 13.32 37.08 4.40
522 532 3.777925 GCACGATTGCGACGCAGT 61.778 61.111 23.18 20.80 41.92 4.40
551 561 2.218759 CGATATTTGTAGGAGTGCACGC 59.781 50.000 12.67 12.67 0.00 5.34
552 562 2.753055 TATTTGTAGGAGTGCACGCA 57.247 45.000 22.36 9.55 0.00 5.24
553 563 1.156736 ATTTGTAGGAGTGCACGCAC 58.843 50.000 22.36 14.28 46.50 5.34
569 582 4.415332 ACGAAGGCGCGTGTCGAT 62.415 61.111 28.07 16.32 43.79 3.59
570 583 3.902063 CGAAGGCGCGTGTCGATG 61.902 66.667 21.53 0.52 41.67 3.84
571 584 4.210304 GAAGGCGCGTGTCGATGC 62.210 66.667 8.43 0.00 41.67 3.91
579 592 2.816360 CGTGTCGATGCATGGCCAG 61.816 63.158 13.05 4.54 0.00 4.85
642 663 2.344025 GGTTACTGCTTGGACCGTTAG 58.656 52.381 0.00 0.00 0.00 2.34
657 678 1.398451 CGTTAGTTTGGTGCGAGCAAG 60.398 52.381 0.00 0.00 36.89 4.01
712 736 6.148264 GTCTCTTCCTTGCAAAAGAATCTTG 58.852 40.000 13.21 3.76 31.45 3.02
727 751 5.544650 AGAATCTTGGTTTTGCAGGAAATG 58.455 37.500 0.00 0.00 0.00 2.32
735 759 1.927487 TTGCAGGAAATGGCATGTCT 58.073 45.000 16.93 4.81 40.17 3.41
747 771 2.927553 GCATGTCTTAGTTTGCCCTG 57.072 50.000 0.00 0.00 0.00 4.45
749 773 2.162408 GCATGTCTTAGTTTGCCCTGAC 59.838 50.000 0.00 0.00 0.00 3.51
750 774 3.679389 CATGTCTTAGTTTGCCCTGACT 58.321 45.455 0.00 0.00 0.00 3.41
752 776 4.164843 TGTCTTAGTTTGCCCTGACTTT 57.835 40.909 0.00 0.00 0.00 2.66
753 777 3.882888 TGTCTTAGTTTGCCCTGACTTTG 59.117 43.478 0.00 0.00 0.00 2.77
754 778 2.884639 TCTTAGTTTGCCCTGACTTTGC 59.115 45.455 0.00 0.00 0.00 3.68
755 779 2.356665 TAGTTTGCCCTGACTTTGCA 57.643 45.000 0.00 0.00 0.00 4.08
756 780 1.035139 AGTTTGCCCTGACTTTGCAG 58.965 50.000 0.00 0.00 36.21 4.41
757 781 0.598419 GTTTGCCCTGACTTTGCAGC 60.598 55.000 0.00 0.00 36.21 5.25
758 782 2.074230 TTTGCCCTGACTTTGCAGCG 62.074 55.000 0.00 0.00 36.21 5.18
760 784 2.260869 GCCCTGACTTTGCAGCGAA 61.261 57.895 0.00 0.00 34.56 4.70
762 786 0.667993 CCCTGACTTTGCAGCGAAAA 59.332 50.000 0.00 0.00 34.56 2.29
763 787 1.066908 CCCTGACTTTGCAGCGAAAAA 59.933 47.619 0.00 0.00 34.56 1.94
783 807 2.420628 AAAACACCATCACGTGCATG 57.579 45.000 11.67 14.71 37.25 4.06
784 808 1.317613 AAACACCATCACGTGCATGT 58.682 45.000 11.67 5.51 37.25 3.21
786 810 0.035317 ACACCATCACGTGCATGTCT 59.965 50.000 11.67 0.00 37.25 3.41
787 811 0.723414 CACCATCACGTGCATGTCTC 59.277 55.000 11.67 0.00 0.00 3.36
788 812 0.321346 ACCATCACGTGCATGTCTCA 59.679 50.000 11.67 0.00 0.00 3.27
789 813 1.004595 CCATCACGTGCATGTCTCAG 58.995 55.000 11.67 0.00 0.00 3.35
790 814 1.673923 CCATCACGTGCATGTCTCAGT 60.674 52.381 11.67 0.00 0.00 3.41
792 816 1.501169 TCACGTGCATGTCTCAGTTG 58.499 50.000 11.67 0.00 0.00 3.16
793 817 0.514255 CACGTGCATGTCTCAGTTGG 59.486 55.000 9.07 0.00 0.00 3.77
794 818 0.106708 ACGTGCATGTCTCAGTTGGT 59.893 50.000 5.51 0.00 0.00 3.67
795 819 1.229428 CGTGCATGTCTCAGTTGGTT 58.771 50.000 0.00 0.00 0.00 3.67
797 821 2.221169 GTGCATGTCTCAGTTGGTTCA 58.779 47.619 0.00 0.00 0.00 3.18
798 822 2.816087 GTGCATGTCTCAGTTGGTTCAT 59.184 45.455 0.00 0.00 0.00 2.57
799 823 2.815503 TGCATGTCTCAGTTGGTTCATG 59.184 45.455 0.00 0.00 36.68 3.07
801 825 1.896220 TGTCTCAGTTGGTTCATGCC 58.104 50.000 0.00 0.00 0.00 4.40
802 826 0.798776 GTCTCAGTTGGTTCATGCCG 59.201 55.000 0.00 0.00 0.00 5.69
803 827 0.684535 TCTCAGTTGGTTCATGCCGA 59.315 50.000 0.00 0.00 0.00 5.54
804 828 0.798776 CTCAGTTGGTTCATGCCGAC 59.201 55.000 2.30 2.30 42.04 4.79
806 830 0.238289 CAGTTGGTTCATGCCGACAC 59.762 55.000 11.18 0.00 43.72 3.67
807 831 0.108585 AGTTGGTTCATGCCGACACT 59.891 50.000 11.18 0.00 43.72 3.55
808 832 1.346395 AGTTGGTTCATGCCGACACTA 59.654 47.619 11.18 0.00 43.72 2.74
809 833 1.463444 GTTGGTTCATGCCGACACTAC 59.537 52.381 5.17 0.00 41.50 2.73
811 835 1.082117 GGTTCATGCCGACACTACCG 61.082 60.000 0.00 0.00 0.00 4.02
821 845 4.860261 CACTACCGGCCGGCGTAC 62.860 72.222 43.58 5.60 39.32 3.67
830 854 4.403137 CCGGCGTACGTGTTCGGA 62.403 66.667 25.27 0.00 42.94 4.55
838 862 1.918609 GTACGTGTTCGGAAGATCTGC 59.081 52.381 0.00 0.00 41.60 4.26
884 908 2.485814 GTCTTGTCTCATGCCCTTGTTC 59.514 50.000 0.00 0.00 0.00 3.18
897 921 0.592247 CTTGTTCGTTGCACACTGGC 60.592 55.000 0.00 0.00 0.00 4.85
898 922 1.029408 TTGTTCGTTGCACACTGGCT 61.029 50.000 0.00 0.00 34.04 4.75
904 928 2.270257 TTGCACACTGGCTGGCATC 61.270 57.895 3.74 0.00 35.98 3.91
907 931 2.360852 ACACTGGCTGGCATCTGC 60.361 61.111 3.74 0.00 41.14 4.26
908 932 2.045242 CACTGGCTGGCATCTGCT 60.045 61.111 3.74 0.00 41.70 4.24
909 933 2.045242 ACTGGCTGGCATCTGCTG 60.045 61.111 3.74 0.00 41.70 4.41
1029 1063 2.100584 CTCTAGCTTCATCGTCTTGCCT 59.899 50.000 0.00 0.00 0.00 4.75
1031 1065 2.191128 AGCTTCATCGTCTTGCCTTT 57.809 45.000 0.00 0.00 0.00 3.11
1074 1108 1.271840 ATCCTCCAAGCAAGCCCGTA 61.272 55.000 0.00 0.00 0.00 4.02
1078 1112 2.359850 CAAGCAAGCCCGTAGCCA 60.360 61.111 0.00 0.00 45.47 4.75
1114 1151 4.077188 GCACTCGCTTGTCGTGCC 62.077 66.667 2.43 0.00 46.09 5.01
1116 1153 2.029288 CACTCGCTTGTCGTGCCAT 61.029 57.895 0.00 0.00 39.67 4.40
1129 1166 2.432972 GCCATTGCAAAGCCACGG 60.433 61.111 1.71 0.00 37.47 4.94
1162 1205 2.994995 ATGACGACCTGGCGGTGA 60.995 61.111 13.50 0.00 45.73 4.02
1170 1213 4.778415 CTGGCGGTGAGTCGTCGG 62.778 72.222 6.98 0.00 37.60 4.79
1239 1282 2.721167 CGCCATCAACCTCGGAGGA 61.721 63.158 30.13 8.78 37.67 3.71
1380 1426 2.126812 GTCGTCGACTTCAGCGCT 60.127 61.111 18.09 2.64 0.00 5.92
1458 1504 2.298163 GGACAAGGAGTACGTGAGGAAA 59.702 50.000 0.00 0.00 32.54 3.13
1485 1531 2.969238 GGCGTCCGCATGATGAGG 60.969 66.667 9.07 9.07 44.11 3.86
1577 1623 2.205152 ACTACAAGGTCACCGCGGT 61.205 57.895 28.70 28.70 0.00 5.68
1600 1646 3.121030 CCGCGGCCTCAAGAACAG 61.121 66.667 14.67 0.00 0.00 3.16
1601 1647 3.793144 CGCGGCCTCAAGAACAGC 61.793 66.667 0.00 0.00 0.00 4.40
1602 1648 3.435186 GCGGCCTCAAGAACAGCC 61.435 66.667 0.00 0.00 42.18 4.85
1604 1650 2.747855 GGCCTCAAGAACAGCCGG 60.748 66.667 0.00 0.00 35.30 6.13
1605 1651 2.747855 GCCTCAAGAACAGCCGGG 60.748 66.667 2.18 0.00 0.00 5.73
1606 1652 2.045926 CCTCAAGAACAGCCGGGG 60.046 66.667 2.18 0.00 0.00 5.73
1607 1653 2.045926 CTCAAGAACAGCCGGGGG 60.046 66.667 2.18 0.00 0.00 5.40
1662 1708 2.223386 GCACTTCTCGTCTATCTTCGCT 60.223 50.000 0.00 0.00 0.00 4.93
1803 1849 2.442212 TATTCAACAACGCGTCCTCA 57.558 45.000 14.44 0.00 0.00 3.86
1898 1944 0.246086 AACGAGCTTCCTCTCTGCAG 59.754 55.000 7.63 7.63 35.90 4.41
1998 2044 2.966309 GAACAAGTTCTGCGCCGGG 61.966 63.158 4.18 0.00 36.69 5.73
2306 2361 1.012841 GGGTACACGTACGAGGAGAG 58.987 60.000 24.41 6.65 36.94 3.20
2443 2501 1.154073 GAGTACGTGACGGTGGAGC 60.154 63.158 10.66 0.00 0.00 4.70
2607 2665 2.338620 CAGGACACCGAGTTCGCA 59.661 61.111 0.00 0.00 38.18 5.10
2612 2670 2.432628 CACCGAGTTCGCAGGGAC 60.433 66.667 0.00 0.00 38.18 4.46
2694 2752 4.766088 ACGTACCGGTTCGCGCTC 62.766 66.667 30.29 4.91 0.00 5.03
2793 2851 2.557805 GTGGTAGACGACGTGCGA 59.442 61.111 4.58 0.00 44.57 5.10
2799 2857 0.587768 TAGACGACGTGCGAGTTGAA 59.412 50.000 4.58 0.00 44.57 2.69
2809 2867 3.000925 CGTGCGAGTTGAACTTTGTAACT 59.999 43.478 0.00 0.00 37.36 2.24
2810 2868 4.207635 CGTGCGAGTTGAACTTTGTAACTA 59.792 41.667 0.00 0.00 34.99 2.24
2811 2869 5.276489 CGTGCGAGTTGAACTTTGTAACTAA 60.276 40.000 0.00 0.00 34.99 2.24
2812 2870 5.900242 GTGCGAGTTGAACTTTGTAACTAAC 59.100 40.000 0.00 0.00 34.99 2.34
2816 2874 7.307219 GCGAGTTGAACTTTGTAACTAACTGAT 60.307 37.037 0.00 0.00 34.99 2.90
2839 2897 2.295070 TGTGCACGAGTCAGCTACTTTA 59.705 45.455 13.13 0.00 39.07 1.85
2840 2898 2.917971 GTGCACGAGTCAGCTACTTTAG 59.082 50.000 0.00 0.00 39.07 1.85
2868 2927 3.735181 GACGGATGATATACCCGGC 57.265 57.895 0.00 7.26 46.83 6.13
2870 2929 0.252103 ACGGATGATATACCCGGCCT 60.252 55.000 0.00 0.00 46.83 5.19
2871 2930 0.460311 CGGATGATATACCCGGCCTC 59.540 60.000 0.00 0.00 39.59 4.70
2872 2931 1.867363 GGATGATATACCCGGCCTCT 58.133 55.000 0.00 0.00 0.00 3.69
2873 2932 2.685819 CGGATGATATACCCGGCCTCTA 60.686 54.545 0.00 0.00 39.59 2.43
2874 2933 2.694109 GGATGATATACCCGGCCTCTAC 59.306 54.545 0.00 0.00 0.00 2.59
2875 2934 2.984435 TGATATACCCGGCCTCTACA 57.016 50.000 0.00 0.00 0.00 2.74
2876 2935 3.468071 TGATATACCCGGCCTCTACAT 57.532 47.619 0.00 0.00 0.00 2.29
2877 2936 3.362706 TGATATACCCGGCCTCTACATC 58.637 50.000 0.00 0.00 0.00 3.06
2878 2937 2.226962 TATACCCGGCCTCTACATCC 57.773 55.000 0.00 0.00 0.00 3.51
2879 2938 0.544595 ATACCCGGCCTCTACATCCC 60.545 60.000 0.00 0.00 0.00 3.85
2880 2939 1.951923 TACCCGGCCTCTACATCCCA 61.952 60.000 0.00 0.00 0.00 4.37
2881 2940 2.511452 CCCGGCCTCTACATCCCAG 61.511 68.421 0.00 0.00 0.00 4.45
2882 2941 1.762460 CCGGCCTCTACATCCCAGT 60.762 63.158 0.00 0.00 0.00 4.00
2883 2942 0.469331 CCGGCCTCTACATCCCAGTA 60.469 60.000 0.00 0.00 0.00 2.74
2884 2943 1.633774 CGGCCTCTACATCCCAGTAT 58.366 55.000 0.00 0.00 0.00 2.12
2885 2944 2.556782 CCGGCCTCTACATCCCAGTATA 60.557 54.545 0.00 0.00 0.00 1.47
2886 2945 3.366396 CGGCCTCTACATCCCAGTATAT 58.634 50.000 0.00 0.00 0.00 0.86
2887 2946 4.533815 CGGCCTCTACATCCCAGTATATA 58.466 47.826 0.00 0.00 0.00 0.86
2888 2947 4.580995 CGGCCTCTACATCCCAGTATATAG 59.419 50.000 0.00 0.00 0.00 1.31
2889 2948 5.631717 CGGCCTCTACATCCCAGTATATAGA 60.632 48.000 0.00 0.00 0.00 1.98
2890 2949 5.595133 GGCCTCTACATCCCAGTATATAGAC 59.405 48.000 0.00 0.00 0.00 2.59
2891 2950 5.297278 GCCTCTACATCCCAGTATATAGACG 59.703 48.000 0.00 0.00 0.00 4.18
2892 2951 6.651086 CCTCTACATCCCAGTATATAGACGA 58.349 44.000 0.00 0.00 0.00 4.20
2893 2952 7.110810 CCTCTACATCCCAGTATATAGACGAA 58.889 42.308 0.00 0.00 0.00 3.85
2894 2953 7.610692 CCTCTACATCCCAGTATATAGACGAAA 59.389 40.741 0.00 0.00 0.00 3.46
2895 2954 8.563123 TCTACATCCCAGTATATAGACGAAAG 57.437 38.462 0.00 0.00 0.00 2.62
2930 2989 9.769093 AACCTTAAACTTCGAATATTGAAATCG 57.231 29.630 0.00 0.00 37.90 3.34
2931 2990 9.158233 ACCTTAAACTTCGAATATTGAAATCGA 57.842 29.630 0.00 0.00 43.18 3.59
2932 2991 9.422196 CCTTAAACTTCGAATATTGAAATCGAC 57.578 33.333 0.00 0.00 44.39 4.20
2933 2992 9.967245 CTTAAACTTCGAATATTGAAATCGACA 57.033 29.630 0.00 0.00 44.39 4.35
2934 2993 9.749490 TTAAACTTCGAATATTGAAATCGACAC 57.251 29.630 0.00 0.00 44.39 3.67
2935 2994 6.961359 ACTTCGAATATTGAAATCGACACA 57.039 33.333 0.00 0.00 44.39 3.72
2936 2995 7.539712 ACTTCGAATATTGAAATCGACACAT 57.460 32.000 0.00 0.00 44.39 3.21
2937 2996 7.621991 ACTTCGAATATTGAAATCGACACATC 58.378 34.615 0.00 0.00 44.39 3.06
2952 3011 5.250235 GACACATCGAACTCTCTAATCCA 57.750 43.478 0.00 0.00 0.00 3.41
2953 3012 5.255710 ACACATCGAACTCTCTAATCCAG 57.744 43.478 0.00 0.00 0.00 3.86
2954 3013 4.098654 ACACATCGAACTCTCTAATCCAGG 59.901 45.833 0.00 0.00 0.00 4.45
2955 3014 4.098654 CACATCGAACTCTCTAATCCAGGT 59.901 45.833 0.00 0.00 0.00 4.00
2956 3015 5.299531 CACATCGAACTCTCTAATCCAGGTA 59.700 44.000 0.00 0.00 0.00 3.08
2957 3016 6.015856 CACATCGAACTCTCTAATCCAGGTAT 60.016 42.308 0.00 0.00 0.00 2.73
2958 3017 7.175119 CACATCGAACTCTCTAATCCAGGTATA 59.825 40.741 0.00 0.00 0.00 1.47
2959 3018 7.891183 ACATCGAACTCTCTAATCCAGGTATAT 59.109 37.037 0.00 0.00 0.00 0.86
2960 3019 8.744652 CATCGAACTCTCTAATCCAGGTATATT 58.255 37.037 0.00 0.00 0.00 1.28
2961 3020 8.707796 TCGAACTCTCTAATCCAGGTATATTT 57.292 34.615 0.00 0.00 0.00 1.40
2962 3021 9.144298 TCGAACTCTCTAATCCAGGTATATTTT 57.856 33.333 0.00 0.00 0.00 1.82
2975 3034 9.561069 TCCAGGTATATTTTAAATCTTGAGAGC 57.439 33.333 0.00 0.00 0.00 4.09
2976 3035 8.499162 CCAGGTATATTTTAAATCTTGAGAGCG 58.501 37.037 0.00 0.00 0.00 5.03
2977 3036 9.046296 CAGGTATATTTTAAATCTTGAGAGCGT 57.954 33.333 0.00 0.00 0.00 5.07
2978 3037 9.614792 AGGTATATTTTAAATCTTGAGAGCGTT 57.385 29.630 0.00 0.00 0.00 4.84
2983 3042 7.739498 TTTTAAATCTTGAGAGCGTTTACCT 57.261 32.000 0.00 0.00 0.00 3.08
2984 3043 6.721571 TTAAATCTTGAGAGCGTTTACCTG 57.278 37.500 0.00 0.00 0.00 4.00
2985 3044 2.743636 TCTTGAGAGCGTTTACCTGG 57.256 50.000 0.00 0.00 0.00 4.45
2986 3045 1.968493 TCTTGAGAGCGTTTACCTGGT 59.032 47.619 4.05 4.05 0.00 4.00
2987 3046 3.159472 TCTTGAGAGCGTTTACCTGGTA 58.841 45.455 1.49 1.49 0.00 3.25
2988 3047 3.767673 TCTTGAGAGCGTTTACCTGGTAT 59.232 43.478 7.50 0.00 0.00 2.73
2989 3048 4.222145 TCTTGAGAGCGTTTACCTGGTATT 59.778 41.667 7.50 0.00 0.00 1.89
2990 3049 4.119442 TGAGAGCGTTTACCTGGTATTC 57.881 45.455 7.50 3.34 0.00 1.75
2991 3050 3.114065 GAGAGCGTTTACCTGGTATTCG 58.886 50.000 19.55 19.55 0.00 3.34
2992 3051 1.591619 GAGCGTTTACCTGGTATTCGC 59.408 52.381 30.41 30.41 39.07 4.70
2993 3052 1.206371 AGCGTTTACCTGGTATTCGCT 59.794 47.619 32.57 32.57 41.59 4.93
2994 3053 1.591619 GCGTTTACCTGGTATTCGCTC 59.408 52.381 30.33 15.29 37.43 5.03
2995 3054 1.850441 CGTTTACCTGGTATTCGCTCG 59.150 52.381 7.50 3.51 0.00 5.03
2996 3055 1.591619 GTTTACCTGGTATTCGCTCGC 59.408 52.381 7.50 0.00 0.00 5.03
2997 3056 1.108776 TTACCTGGTATTCGCTCGCT 58.891 50.000 7.50 0.00 0.00 4.93
2998 3057 0.666913 TACCTGGTATTCGCTCGCTC 59.333 55.000 1.49 0.00 0.00 5.03
2999 3058 1.038130 ACCTGGTATTCGCTCGCTCT 61.038 55.000 0.00 0.00 0.00 4.09
3000 3059 0.596083 CCTGGTATTCGCTCGCTCTG 60.596 60.000 0.00 0.00 0.00 3.35
3001 3060 1.211818 CTGGTATTCGCTCGCTCTGC 61.212 60.000 0.00 0.00 0.00 4.26
3002 3061 1.066587 GGTATTCGCTCGCTCTGCT 59.933 57.895 0.00 0.00 0.00 4.24
3003 3062 0.528684 GGTATTCGCTCGCTCTGCTT 60.529 55.000 0.00 0.00 0.00 3.91
3004 3063 1.281899 GTATTCGCTCGCTCTGCTTT 58.718 50.000 0.00 0.00 0.00 3.51
3005 3064 1.661112 GTATTCGCTCGCTCTGCTTTT 59.339 47.619 0.00 0.00 0.00 2.27
3006 3065 0.445436 ATTCGCTCGCTCTGCTTTTG 59.555 50.000 0.00 0.00 0.00 2.44
3007 3066 0.880278 TTCGCTCGCTCTGCTTTTGT 60.880 50.000 0.00 0.00 0.00 2.83
3008 3067 0.880278 TCGCTCGCTCTGCTTTTGTT 60.880 50.000 0.00 0.00 0.00 2.83
3009 3068 0.040958 CGCTCGCTCTGCTTTTGTTT 60.041 50.000 0.00 0.00 0.00 2.83
3010 3069 1.597937 CGCTCGCTCTGCTTTTGTTTT 60.598 47.619 0.00 0.00 0.00 2.43
3011 3070 2.463876 GCTCGCTCTGCTTTTGTTTTT 58.536 42.857 0.00 0.00 0.00 1.94
3012 3071 2.469147 GCTCGCTCTGCTTTTGTTTTTC 59.531 45.455 0.00 0.00 0.00 2.29
3013 3072 3.793465 GCTCGCTCTGCTTTTGTTTTTCT 60.793 43.478 0.00 0.00 0.00 2.52
3014 3073 4.354587 CTCGCTCTGCTTTTGTTTTTCTT 58.645 39.130 0.00 0.00 0.00 2.52
3015 3074 4.743493 TCGCTCTGCTTTTGTTTTTCTTT 58.257 34.783 0.00 0.00 0.00 2.52
3016 3075 5.167845 TCGCTCTGCTTTTGTTTTTCTTTT 58.832 33.333 0.00 0.00 0.00 2.27
3017 3076 6.326375 TCGCTCTGCTTTTGTTTTTCTTTTA 58.674 32.000 0.00 0.00 0.00 1.52
3018 3077 6.978080 TCGCTCTGCTTTTGTTTTTCTTTTAT 59.022 30.769 0.00 0.00 0.00 1.40
3019 3078 7.491048 TCGCTCTGCTTTTGTTTTTCTTTTATT 59.509 29.630 0.00 0.00 0.00 1.40
3020 3079 8.116136 CGCTCTGCTTTTGTTTTTCTTTTATTT 58.884 29.630 0.00 0.00 0.00 1.40
3021 3080 9.425893 GCTCTGCTTTTGTTTTTCTTTTATTTC 57.574 29.630 0.00 0.00 0.00 2.17
3022 3081 9.920826 CTCTGCTTTTGTTTTTCTTTTATTTCC 57.079 29.630 0.00 0.00 0.00 3.13
3023 3082 9.665719 TCTGCTTTTGTTTTTCTTTTATTTCCT 57.334 25.926 0.00 0.00 0.00 3.36
3086 3145 9.715121 TCCTTCGTTATACTTTGTTATTTCACT 57.285 29.630 0.00 0.00 0.00 3.41
3087 3146 9.755064 CCTTCGTTATACTTTGTTATTTCACTG 57.245 33.333 0.00 0.00 0.00 3.66
3088 3147 9.755064 CTTCGTTATACTTTGTTATTTCACTGG 57.245 33.333 0.00 0.00 0.00 4.00
3089 3148 8.836268 TCGTTATACTTTGTTATTTCACTGGT 57.164 30.769 0.00 0.00 0.00 4.00
3090 3149 9.275398 TCGTTATACTTTGTTATTTCACTGGTT 57.725 29.630 0.00 0.00 0.00 3.67
3091 3150 9.887406 CGTTATACTTTGTTATTTCACTGGTTT 57.113 29.630 0.00 0.00 0.00 3.27
3097 3156 9.313118 ACTTTGTTATTTCACTGGTTTTCATTC 57.687 29.630 0.00 0.00 0.00 2.67
3098 3157 9.533253 CTTTGTTATTTCACTGGTTTTCATTCT 57.467 29.630 0.00 0.00 0.00 2.40
3099 3158 9.883142 TTTGTTATTTCACTGGTTTTCATTCTT 57.117 25.926 0.00 0.00 0.00 2.52
3100 3159 9.528018 TTGTTATTTCACTGGTTTTCATTCTTC 57.472 29.630 0.00 0.00 0.00 2.87
3101 3160 7.860373 TGTTATTTCACTGGTTTTCATTCTTCG 59.140 33.333 0.00 0.00 0.00 3.79
3102 3161 5.828299 TTTCACTGGTTTTCATTCTTCGT 57.172 34.783 0.00 0.00 0.00 3.85
3103 3162 5.828299 TTCACTGGTTTTCATTCTTCGTT 57.172 34.783 0.00 0.00 0.00 3.85
3104 3163 5.168526 TCACTGGTTTTCATTCTTCGTTG 57.831 39.130 0.00 0.00 0.00 4.10
3105 3164 3.730715 CACTGGTTTTCATTCTTCGTTGC 59.269 43.478 0.00 0.00 0.00 4.17
3106 3165 3.380004 ACTGGTTTTCATTCTTCGTTGCA 59.620 39.130 0.00 0.00 0.00 4.08
3107 3166 4.037923 ACTGGTTTTCATTCTTCGTTGCAT 59.962 37.500 0.00 0.00 0.00 3.96
3108 3167 4.942852 TGGTTTTCATTCTTCGTTGCATT 58.057 34.783 0.00 0.00 0.00 3.56
3109 3168 5.355596 TGGTTTTCATTCTTCGTTGCATTT 58.644 33.333 0.00 0.00 0.00 2.32
3110 3169 5.814705 TGGTTTTCATTCTTCGTTGCATTTT 59.185 32.000 0.00 0.00 0.00 1.82
3111 3170 6.314896 TGGTTTTCATTCTTCGTTGCATTTTT 59.685 30.769 0.00 0.00 0.00 1.94
3112 3171 7.492669 TGGTTTTCATTCTTCGTTGCATTTTTA 59.507 29.630 0.00 0.00 0.00 1.52
3113 3172 8.495148 GGTTTTCATTCTTCGTTGCATTTTTAT 58.505 29.630 0.00 0.00 0.00 1.40
3114 3173 9.862585 GTTTTCATTCTTCGTTGCATTTTTATT 57.137 25.926 0.00 0.00 0.00 1.40
3142 3201 8.877808 ATTGTGTTTCTTCCTTGATTTTCTTC 57.122 30.769 0.00 0.00 0.00 2.87
3143 3202 6.494842 TGTGTTTCTTCCTTGATTTTCTTCG 58.505 36.000 0.00 0.00 0.00 3.79
3144 3203 6.094881 TGTGTTTCTTCCTTGATTTTCTTCGT 59.905 34.615 0.00 0.00 0.00 3.85
3145 3204 7.281324 TGTGTTTCTTCCTTGATTTTCTTCGTA 59.719 33.333 0.00 0.00 0.00 3.43
3146 3205 8.290325 GTGTTTCTTCCTTGATTTTCTTCGTAT 58.710 33.333 0.00 0.00 0.00 3.06
3147 3206 8.846211 TGTTTCTTCCTTGATTTTCTTCGTATT 58.154 29.630 0.00 0.00 0.00 1.89
3148 3207 9.118236 GTTTCTTCCTTGATTTTCTTCGTATTG 57.882 33.333 0.00 0.00 0.00 1.90
3149 3208 7.979444 TCTTCCTTGATTTTCTTCGTATTGT 57.021 32.000 0.00 0.00 0.00 2.71
3150 3209 8.391075 TCTTCCTTGATTTTCTTCGTATTGTT 57.609 30.769 0.00 0.00 0.00 2.83
3151 3210 8.846211 TCTTCCTTGATTTTCTTCGTATTGTTT 58.154 29.630 0.00 0.00 0.00 2.83
3152 3211 9.463443 CTTCCTTGATTTTCTTCGTATTGTTTT 57.537 29.630 0.00 0.00 0.00 2.43
3153 3212 9.810545 TTCCTTGATTTTCTTCGTATTGTTTTT 57.189 25.926 0.00 0.00 0.00 1.94
3154 3213 9.458374 TCCTTGATTTTCTTCGTATTGTTTTTC 57.542 29.630 0.00 0.00 0.00 2.29
3155 3214 8.699749 CCTTGATTTTCTTCGTATTGTTTTTCC 58.300 33.333 0.00 0.00 0.00 3.13
3156 3215 9.463443 CTTGATTTTCTTCGTATTGTTTTTCCT 57.537 29.630 0.00 0.00 0.00 3.36
3157 3216 9.810545 TTGATTTTCTTCGTATTGTTTTTCCTT 57.189 25.926 0.00 0.00 0.00 3.36
3158 3217 9.810545 TGATTTTCTTCGTATTGTTTTTCCTTT 57.189 25.926 0.00 0.00 0.00 3.11
3167 3226 9.857957 TCGTATTGTTTTTCCTTTACTTTTTGT 57.142 25.926 0.00 0.00 0.00 2.83
3177 3236 8.455598 TTCCTTTACTTTTTGTTTCTTTGTCG 57.544 30.769 0.00 0.00 0.00 4.35
3178 3237 7.030768 TCCTTTACTTTTTGTTTCTTTGTCGG 58.969 34.615 0.00 0.00 0.00 4.79
3179 3238 6.237728 CCTTTACTTTTTGTTTCTTTGTCGGC 60.238 38.462 0.00 0.00 0.00 5.54
3180 3239 4.450082 ACTTTTTGTTTCTTTGTCGGCT 57.550 36.364 0.00 0.00 0.00 5.52
3181 3240 4.421058 ACTTTTTGTTTCTTTGTCGGCTC 58.579 39.130 0.00 0.00 0.00 4.70
3182 3241 4.157840 ACTTTTTGTTTCTTTGTCGGCTCT 59.842 37.500 0.00 0.00 0.00 4.09
3183 3242 5.355910 ACTTTTTGTTTCTTTGTCGGCTCTA 59.644 36.000 0.00 0.00 0.00 2.43
3184 3243 5.821516 TTTTGTTTCTTTGTCGGCTCTAA 57.178 34.783 0.00 0.00 0.00 2.10
3185 3244 6.385649 TTTTGTTTCTTTGTCGGCTCTAAT 57.614 33.333 0.00 0.00 0.00 1.73
3186 3245 6.385649 TTTGTTTCTTTGTCGGCTCTAATT 57.614 33.333 0.00 0.00 0.00 1.40
3187 3246 5.356882 TGTTTCTTTGTCGGCTCTAATTG 57.643 39.130 0.00 0.00 0.00 2.32
3188 3247 5.060506 TGTTTCTTTGTCGGCTCTAATTGA 58.939 37.500 0.00 0.00 0.00 2.57
3189 3248 5.705441 TGTTTCTTTGTCGGCTCTAATTGAT 59.295 36.000 0.00 0.00 0.00 2.57
3190 3249 6.206634 TGTTTCTTTGTCGGCTCTAATTGATT 59.793 34.615 0.00 0.00 0.00 2.57
3191 3250 6.817765 TTCTTTGTCGGCTCTAATTGATTT 57.182 33.333 0.00 0.00 0.00 2.17
3192 3251 6.422776 TCTTTGTCGGCTCTAATTGATTTC 57.577 37.500 0.00 0.00 0.00 2.17
3193 3252 6.173339 TCTTTGTCGGCTCTAATTGATTTCT 58.827 36.000 0.00 0.00 0.00 2.52
3194 3253 6.655003 TCTTTGTCGGCTCTAATTGATTTCTT 59.345 34.615 0.00 0.00 0.00 2.52
3195 3254 6.817765 TTGTCGGCTCTAATTGATTTCTTT 57.182 33.333 0.00 0.00 0.00 2.52
3196 3255 6.422776 TGTCGGCTCTAATTGATTTCTTTC 57.577 37.500 0.00 0.00 0.00 2.62
3197 3256 6.173339 TGTCGGCTCTAATTGATTTCTTTCT 58.827 36.000 0.00 0.00 0.00 2.52
3198 3257 6.655003 TGTCGGCTCTAATTGATTTCTTTCTT 59.345 34.615 0.00 0.00 0.00 2.52
3199 3258 6.963805 GTCGGCTCTAATTGATTTCTTTCTTG 59.036 38.462 0.00 0.00 0.00 3.02
3200 3259 6.878923 TCGGCTCTAATTGATTTCTTTCTTGA 59.121 34.615 0.00 0.00 0.00 3.02
3201 3260 6.963805 CGGCTCTAATTGATTTCTTTCTTGAC 59.036 38.462 0.00 0.00 0.00 3.18
3202 3261 7.361201 CGGCTCTAATTGATTTCTTTCTTGACA 60.361 37.037 0.00 0.00 0.00 3.58
3203 3262 7.752686 GGCTCTAATTGATTTCTTTCTTGACAC 59.247 37.037 0.00 0.00 0.00 3.67
3204 3263 8.292448 GCTCTAATTGATTTCTTTCTTGACACA 58.708 33.333 0.00 0.00 0.00 3.72
3207 3266 9.903682 CTAATTGATTTCTTTCTTGACACATGT 57.096 29.630 0.00 0.00 0.00 3.21
3208 3267 8.807667 AATTGATTTCTTTCTTGACACATGTC 57.192 30.769 5.02 5.02 44.97 3.06
3209 3268 7.572523 TTGATTTCTTTCTTGACACATGTCT 57.427 32.000 12.98 0.00 44.99 3.41
3210 3269 8.675705 TTGATTTCTTTCTTGACACATGTCTA 57.324 30.769 12.98 4.90 44.99 2.59
3211 3270 8.675705 TGATTTCTTTCTTGACACATGTCTAA 57.324 30.769 12.98 5.44 44.99 2.10
3212 3271 9.288576 TGATTTCTTTCTTGACACATGTCTAAT 57.711 29.630 12.98 0.00 44.99 1.73
3249 3308 9.290988 ACATAATGTACATTTTTAGGTCACACA 57.709 29.630 25.31 4.01 32.50 3.72
3252 3311 7.994425 ATGTACATTTTTAGGTCACACATGA 57.006 32.000 1.41 0.00 0.00 3.07
3253 3312 7.809546 TGTACATTTTTAGGTCACACATGAA 57.190 32.000 0.00 0.00 36.31 2.57
3254 3313 8.226819 TGTACATTTTTAGGTCACACATGAAA 57.773 30.769 0.00 0.00 36.31 2.69
3255 3314 8.132362 TGTACATTTTTAGGTCACACATGAAAC 58.868 33.333 0.00 0.00 36.31 2.78
3256 3315 7.106439 ACATTTTTAGGTCACACATGAAACA 57.894 32.000 0.00 0.00 36.31 2.83
3257 3316 7.725251 ACATTTTTAGGTCACACATGAAACAT 58.275 30.769 0.00 0.00 36.31 2.71
3258 3317 8.203485 ACATTTTTAGGTCACACATGAAACATT 58.797 29.630 0.00 0.00 36.31 2.71
3259 3318 9.044150 CATTTTTAGGTCACACATGAAACATTT 57.956 29.630 0.00 0.00 36.31 2.32
3260 3319 9.612066 ATTTTTAGGTCACACATGAAACATTTT 57.388 25.926 0.00 0.00 36.31 1.82
3261 3320 9.442047 TTTTTAGGTCACACATGAAACATTTTT 57.558 25.926 0.00 0.00 36.31 1.94
3334 3393 9.651913 AATACATGTTTTCAACACTTTTTGAGT 57.348 25.926 2.30 0.00 45.50 3.41
3336 3395 8.460831 ACATGTTTTCAACACTTTTTGAGTAC 57.539 30.769 0.00 0.00 45.50 2.73
3337 3396 8.085296 ACATGTTTTCAACACTTTTTGAGTACA 58.915 29.630 0.00 0.00 45.50 2.90
3338 3397 9.086336 CATGTTTTCAACACTTTTTGAGTACAT 57.914 29.630 0.00 8.14 45.50 2.29
3339 3398 8.459521 TGTTTTCAACACTTTTTGAGTACATG 57.540 30.769 0.00 0.00 36.84 3.21
3340 3399 7.543868 TGTTTTCAACACTTTTTGAGTACATGG 59.456 33.333 0.00 0.00 36.84 3.66
3341 3400 6.767524 TTCAACACTTTTTGAGTACATGGT 57.232 33.333 0.00 0.00 36.84 3.55
3342 3401 7.867305 TTCAACACTTTTTGAGTACATGGTA 57.133 32.000 0.00 0.00 36.84 3.25
3343 3402 7.867305 TCAACACTTTTTGAGTACATGGTAA 57.133 32.000 0.00 0.00 36.65 2.85
3344 3403 7.699566 TCAACACTTTTTGAGTACATGGTAAC 58.300 34.615 0.00 0.00 36.65 2.50
3345 3404 7.337184 TCAACACTTTTTGAGTACATGGTAACA 59.663 33.333 0.00 0.00 45.32 2.41
3364 3423 9.762381 TGGTAACATTCTTCCAAATATAGGTTT 57.238 29.630 0.00 0.00 46.17 3.27
3366 3425 9.516314 GTAACATTCTTCCAAATATAGGTTTGC 57.484 33.333 0.00 0.00 37.67 3.68
3367 3426 7.716799 ACATTCTTCCAAATATAGGTTTGCA 57.283 32.000 0.00 0.00 37.67 4.08
3368 3427 8.310122 ACATTCTTCCAAATATAGGTTTGCAT 57.690 30.769 0.00 0.00 37.67 3.96
3369 3428 8.761689 ACATTCTTCCAAATATAGGTTTGCATT 58.238 29.630 0.00 0.00 37.67 3.56
3370 3429 9.603921 CATTCTTCCAAATATAGGTTTGCATTT 57.396 29.630 0.00 0.00 37.67 2.32
3372 3431 9.651913 TTCTTCCAAATATAGGTTTGCATTTTC 57.348 29.630 0.00 0.00 37.67 2.29
3373 3432 9.034800 TCTTCCAAATATAGGTTTGCATTTTCT 57.965 29.630 0.00 0.00 37.67 2.52
3374 3433 9.657419 CTTCCAAATATAGGTTTGCATTTTCTT 57.343 29.630 0.00 0.00 37.67 2.52
3627 3686 6.992063 TTTTTAAATGCCACAAACACATGT 57.008 29.167 0.00 0.00 0.00 3.21
3628 3687 6.992063 TTTTAAATGCCACAAACACATGTT 57.008 29.167 0.00 0.00 40.50 2.71
3630 3689 6.992063 TTAAATGCCACAAACACATGTTTT 57.008 29.167 7.26 0.00 45.07 2.43
3631 3690 4.879104 AATGCCACAAACACATGTTTTG 57.121 36.364 21.57 21.57 45.07 2.44
3632 3691 3.599730 TGCCACAAACACATGTTTTGA 57.400 38.095 26.24 11.47 45.07 2.69
3633 3692 3.930336 TGCCACAAACACATGTTTTGAA 58.070 36.364 26.24 13.88 45.07 2.69
3634 3693 4.318332 TGCCACAAACACATGTTTTGAAA 58.682 34.783 26.24 13.66 45.07 2.69
3635 3694 4.940046 TGCCACAAACACATGTTTTGAAAT 59.060 33.333 26.24 11.71 45.07 2.17
3636 3695 5.064452 TGCCACAAACACATGTTTTGAAATC 59.936 36.000 26.24 17.07 45.07 2.17
3637 3696 5.064452 GCCACAAACACATGTTTTGAAATCA 59.936 36.000 26.24 0.00 45.07 2.57
3638 3697 6.238429 GCCACAAACACATGTTTTGAAATCAT 60.238 34.615 26.24 10.75 45.07 2.45
3639 3698 7.127042 CCACAAACACATGTTTTGAAATCATG 58.873 34.615 26.24 21.22 45.07 3.07
3641 3700 8.815189 CACAAACACATGTTTTGAAATCATGTA 58.185 29.630 25.48 0.00 46.54 2.29
3642 3701 9.033481 ACAAACACATGTTTTGAAATCATGTAG 57.967 29.630 25.48 21.66 46.54 2.74
3643 3702 9.247126 CAAACACATGTTTTGAAATCATGTAGA 57.753 29.630 25.48 0.00 46.54 2.59
3644 3703 9.985730 AAACACATGTTTTGAAATCATGTAGAT 57.014 25.926 25.48 15.66 46.54 1.98
3645 3704 9.985730 AACACATGTTTTGAAATCATGTAGATT 57.014 25.926 25.48 19.01 46.54 2.40
3676 3735 8.918961 AATTTTTCAACATTTTGAGTGTACGA 57.081 26.923 0.00 0.00 42.79 3.43
3677 3736 8.918961 ATTTTTCAACATTTTGAGTGTACGAA 57.081 26.923 0.00 0.00 42.79 3.85
3678 3737 8.744008 TTTTTCAACATTTTGAGTGTACGAAA 57.256 26.923 0.00 0.00 42.79 3.46
3679 3738 7.728580 TTTCAACATTTTGAGTGTACGAAAC 57.271 32.000 0.00 0.00 42.79 2.78
3680 3739 6.424176 TCAACATTTTGAGTGTACGAAACA 57.576 33.333 0.00 0.00 36.79 2.83
3681 3740 6.843208 TCAACATTTTGAGTGTACGAAACAA 58.157 32.000 0.00 0.00 36.99 2.83
3682 3741 7.476667 TCAACATTTTGAGTGTACGAAACAAT 58.523 30.769 0.00 0.00 39.59 2.71
3683 3742 7.971168 TCAACATTTTGAGTGTACGAAACAATT 59.029 29.630 0.00 0.00 36.31 2.32
3684 3743 8.591312 CAACATTTTGAGTGTACGAAACAATTT 58.409 29.630 0.00 0.00 36.31 1.82
3685 3744 8.696410 ACATTTTGAGTGTACGAAACAATTTT 57.304 26.923 0.00 0.00 40.63 1.82
3686 3745 9.790389 ACATTTTGAGTGTACGAAACAATTTTA 57.210 25.926 0.00 0.00 40.63 1.52
3716 3775 9.733219 TTGAATCACACGAATATATTACGTACA 57.267 29.630 16.94 8.74 38.47 2.90
3717 3776 9.902196 TGAATCACACGAATATATTACGTACAT 57.098 29.630 16.94 0.00 38.47 2.29
3765 3824 9.474920 TTTTAGATGCCACTAACATTTTTCTTG 57.525 29.630 0.00 0.00 32.99 3.02
3766 3825 5.473039 AGATGCCACTAACATTTTTCTTGC 58.527 37.500 0.00 0.00 0.00 4.01
3767 3826 3.988819 TGCCACTAACATTTTTCTTGCC 58.011 40.909 0.00 0.00 0.00 4.52
3768 3827 3.386078 TGCCACTAACATTTTTCTTGCCA 59.614 39.130 0.00 0.00 0.00 4.92
3769 3828 4.141846 TGCCACTAACATTTTTCTTGCCAA 60.142 37.500 0.00 0.00 0.00 4.52
3770 3829 4.996758 GCCACTAACATTTTTCTTGCCAAT 59.003 37.500 0.00 0.00 0.00 3.16
3771 3830 5.469760 GCCACTAACATTTTTCTTGCCAATT 59.530 36.000 0.00 0.00 0.00 2.32
3772 3831 6.017192 GCCACTAACATTTTTCTTGCCAATTT 60.017 34.615 0.00 0.00 0.00 1.82
3773 3832 7.354257 CCACTAACATTTTTCTTGCCAATTTG 58.646 34.615 0.00 0.00 0.00 2.32
3774 3833 7.012232 CCACTAACATTTTTCTTGCCAATTTGT 59.988 33.333 0.00 0.00 0.00 2.83
3775 3834 8.397148 CACTAACATTTTTCTTGCCAATTTGTT 58.603 29.630 0.00 0.00 0.00 2.83
3776 3835 8.611757 ACTAACATTTTTCTTGCCAATTTGTTC 58.388 29.630 0.00 0.00 0.00 3.18
3777 3836 6.998968 ACATTTTTCTTGCCAATTTGTTCA 57.001 29.167 0.00 0.00 0.00 3.18
3778 3837 7.018635 ACATTTTTCTTGCCAATTTGTTCAG 57.981 32.000 0.00 0.00 0.00 3.02
3779 3838 6.038492 ACATTTTTCTTGCCAATTTGTTCAGG 59.962 34.615 0.00 0.00 0.00 3.86
3780 3839 4.751767 TTTCTTGCCAATTTGTTCAGGT 57.248 36.364 0.00 0.00 0.00 4.00
3781 3840 4.751767 TTCTTGCCAATTTGTTCAGGTT 57.248 36.364 0.00 0.00 0.00 3.50
3782 3841 4.751767 TCTTGCCAATTTGTTCAGGTTT 57.248 36.364 0.00 0.00 0.00 3.27
3783 3842 4.692228 TCTTGCCAATTTGTTCAGGTTTC 58.308 39.130 0.00 0.00 0.00 2.78
3784 3843 3.467374 TGCCAATTTGTTCAGGTTTCC 57.533 42.857 0.00 0.00 0.00 3.13
3785 3844 2.768527 TGCCAATTTGTTCAGGTTTCCA 59.231 40.909 0.00 0.00 0.00 3.53
3786 3845 3.198635 TGCCAATTTGTTCAGGTTTCCAA 59.801 39.130 0.00 0.00 0.00 3.53
3787 3846 4.195416 GCCAATTTGTTCAGGTTTCCAAA 58.805 39.130 0.00 0.00 0.00 3.28
3788 3847 4.821260 GCCAATTTGTTCAGGTTTCCAAAT 59.179 37.500 0.00 0.00 38.72 2.32
3789 3848 5.299028 GCCAATTTGTTCAGGTTTCCAAATT 59.701 36.000 0.00 0.00 44.18 1.82
3790 3849 6.183360 GCCAATTTGTTCAGGTTTCCAAATTT 60.183 34.615 6.49 0.00 41.99 1.82
3791 3850 7.194962 CCAATTTGTTCAGGTTTCCAAATTTG 58.805 34.615 11.40 11.40 41.99 2.32
3792 3851 7.148103 CCAATTTGTTCAGGTTTCCAAATTTGT 60.148 33.333 16.73 0.00 41.99 2.83
3793 3852 7.936496 ATTTGTTCAGGTTTCCAAATTTGTT 57.064 28.000 16.73 0.00 34.73 2.83
3794 3853 6.976636 TTGTTCAGGTTTCCAAATTTGTTC 57.023 33.333 16.73 4.45 0.00 3.18
3795 3854 5.423886 TGTTCAGGTTTCCAAATTTGTTCC 58.576 37.500 16.73 12.17 0.00 3.62
3796 3855 5.188751 TGTTCAGGTTTCCAAATTTGTTCCT 59.811 36.000 16.73 13.93 0.00 3.36
3797 3856 6.381420 TGTTCAGGTTTCCAAATTTGTTCCTA 59.619 34.615 16.73 3.03 0.00 2.94
3798 3857 7.070571 TGTTCAGGTTTCCAAATTTGTTCCTAT 59.929 33.333 16.73 0.00 0.00 2.57
3799 3858 7.610580 TCAGGTTTCCAAATTTGTTCCTATT 57.389 32.000 16.73 0.00 0.00 1.73
3800 3859 8.028652 TCAGGTTTCCAAATTTGTTCCTATTT 57.971 30.769 16.73 0.00 0.00 1.40
3801 3860 8.490311 TCAGGTTTCCAAATTTGTTCCTATTTT 58.510 29.630 16.73 0.00 0.00 1.82
3802 3861 9.119418 CAGGTTTCCAAATTTGTTCCTATTTTT 57.881 29.630 16.73 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 4.452455 TCTTGTCAATCTTTCGCTTTCCTC 59.548 41.667 0.00 0.00 0.00 3.71
265 266 7.148390 TGTCAATTGTTTTGTTGTCTAGAACGA 60.148 33.333 5.13 0.00 0.00 3.85
299 300 8.756927 TCTATACATCATTCATCCTCTCAATCC 58.243 37.037 0.00 0.00 0.00 3.01
300 301 9.585099 GTCTATACATCATTCATCCTCTCAATC 57.415 37.037 0.00 0.00 0.00 2.67
338 339 8.908786 TTCCTCTGAAATTATCATACATCACC 57.091 34.615 0.00 0.00 37.44 4.02
438 439 2.642154 AAACCGTCACCCATTACACA 57.358 45.000 0.00 0.00 0.00 3.72
445 446 2.623889 CCAACAAATAAACCGTCACCCA 59.376 45.455 0.00 0.00 0.00 4.51
449 450 1.614413 GGGCCAACAAATAAACCGTCA 59.386 47.619 4.39 0.00 0.00 4.35
452 453 0.599060 ACGGGCCAACAAATAAACCG 59.401 50.000 4.39 0.00 44.86 4.44
479 489 3.256136 AGCATTACTATAGACTGCCCGTC 59.744 47.826 6.78 0.00 43.17 4.79
506 516 1.225475 GAACTGCGTCGCAATCGTG 60.225 57.895 22.01 11.52 38.41 4.35
511 521 3.334751 CGGTGAACTGCGTCGCAA 61.335 61.111 22.01 2.88 38.41 4.85
522 532 4.400251 ACTCCTACAAATATCGACGGTGAA 59.600 41.667 0.00 0.00 0.00 3.18
552 562 4.415332 ATCGACACGCGCCTTCGT 62.415 61.111 19.85 5.17 44.35 3.85
553 563 3.902063 CATCGACACGCGCCTTCG 61.902 66.667 16.01 16.01 40.61 3.79
559 572 4.580044 GCCATGCATCGACACGCG 62.580 66.667 3.53 3.53 42.69 6.01
579 592 1.007502 TACGTACGTGTGTGGCCAC 60.008 57.895 30.25 29.67 42.19 5.01
642 663 0.110192 GCTACTTGCTCGCACCAAAC 60.110 55.000 0.00 0.00 38.95 2.93
657 678 2.815647 GACCAGCACGCCAGCTAC 60.816 66.667 0.00 0.00 44.54 3.58
712 736 2.078392 CATGCCATTTCCTGCAAAACC 58.922 47.619 0.00 0.00 41.50 3.27
735 759 2.622942 CTGCAAAGTCAGGGCAAACTAA 59.377 45.455 0.00 0.00 37.06 2.24
744 768 2.490328 TTTTTCGCTGCAAAGTCAGG 57.510 45.000 0.00 0.00 34.74 3.86
763 787 2.100584 ACATGCACGTGATGGTGTTTTT 59.899 40.909 22.23 0.11 40.08 1.94
764 788 1.680735 ACATGCACGTGATGGTGTTTT 59.319 42.857 22.23 0.78 40.08 2.43
765 789 1.266718 GACATGCACGTGATGGTGTTT 59.733 47.619 22.23 4.00 40.08 2.83
766 790 0.874390 GACATGCACGTGATGGTGTT 59.126 50.000 22.23 4.36 40.08 3.32
767 791 0.035317 AGACATGCACGTGATGGTGT 59.965 50.000 22.23 16.53 40.08 4.16
768 792 0.723414 GAGACATGCACGTGATGGTG 59.277 55.000 22.23 13.41 40.89 4.17
769 793 0.321346 TGAGACATGCACGTGATGGT 59.679 50.000 22.23 12.99 0.00 3.55
770 794 1.004595 CTGAGACATGCACGTGATGG 58.995 55.000 22.23 9.52 0.00 3.51
771 795 1.718396 ACTGAGACATGCACGTGATG 58.282 50.000 22.23 20.61 0.00 3.07
772 796 2.071540 CAACTGAGACATGCACGTGAT 58.928 47.619 22.23 7.22 0.00 3.06
773 797 1.501169 CAACTGAGACATGCACGTGA 58.499 50.000 22.23 4.80 0.00 4.35
783 807 0.798776 CGGCATGAACCAACTGAGAC 59.201 55.000 0.00 0.00 0.00 3.36
784 808 0.684535 TCGGCATGAACCAACTGAGA 59.315 50.000 0.00 0.00 0.00 3.27
786 810 0.107643 TGTCGGCATGAACCAACTGA 59.892 50.000 0.00 0.00 0.00 3.41
787 811 0.238289 GTGTCGGCATGAACCAACTG 59.762 55.000 0.00 0.00 0.00 3.16
788 812 0.108585 AGTGTCGGCATGAACCAACT 59.891 50.000 0.00 0.00 0.00 3.16
789 813 1.463444 GTAGTGTCGGCATGAACCAAC 59.537 52.381 0.00 0.00 0.00 3.77
790 814 1.609580 GGTAGTGTCGGCATGAACCAA 60.610 52.381 12.00 0.00 0.00 3.67
792 816 1.082117 CGGTAGTGTCGGCATGAACC 61.082 60.000 0.00 0.00 0.00 3.62
793 817 1.082117 CCGGTAGTGTCGGCATGAAC 61.082 60.000 0.00 0.00 41.07 3.18
794 818 1.216977 CCGGTAGTGTCGGCATGAA 59.783 57.895 0.00 0.00 41.07 2.57
795 819 2.889617 CCGGTAGTGTCGGCATGA 59.110 61.111 0.00 0.00 41.07 3.07
804 828 4.860261 GTACGCCGGCCGGTAGTG 62.860 72.222 39.06 30.69 42.52 2.74
813 837 3.895102 TTCCGAACACGTACGCCGG 62.895 63.158 23.73 23.73 42.24 6.13
814 838 2.428902 TTCCGAACACGTACGCCG 60.429 61.111 16.72 13.37 44.03 6.46
816 840 0.912528 GATCTTCCGAACACGTACGC 59.087 55.000 16.72 0.00 0.00 4.42
817 841 2.174764 CAGATCTTCCGAACACGTACG 58.825 52.381 15.01 15.01 0.00 3.67
818 842 1.918609 GCAGATCTTCCGAACACGTAC 59.081 52.381 0.00 0.00 0.00 3.67
819 843 1.135199 GGCAGATCTTCCGAACACGTA 60.135 52.381 0.00 0.00 0.00 3.57
820 844 0.389948 GGCAGATCTTCCGAACACGT 60.390 55.000 0.00 0.00 0.00 4.49
821 845 1.084370 GGGCAGATCTTCCGAACACG 61.084 60.000 5.25 0.00 0.00 4.49
822 846 1.084370 CGGGCAGATCTTCCGAACAC 61.084 60.000 22.97 2.15 45.96 3.32
823 847 1.218047 CGGGCAGATCTTCCGAACA 59.782 57.895 22.97 0.00 45.96 3.18
824 848 4.110493 CGGGCAGATCTTCCGAAC 57.890 61.111 22.97 2.81 45.96 3.95
827 851 2.278857 CGTCGGGCAGATCTTCCG 60.279 66.667 21.92 21.92 44.59 4.30
828 852 1.227002 GACGTCGGGCAGATCTTCC 60.227 63.158 2.27 2.27 0.00 3.46
829 853 1.586564 CGACGTCGGGCAGATCTTC 60.587 63.158 29.70 0.00 35.37 2.87
830 854 2.044555 TCGACGTCGGGCAGATCTT 61.045 57.895 35.05 0.00 40.29 2.40
838 862 4.527157 GGTAGCGTCGACGTCGGG 62.527 72.222 35.48 27.09 42.22 5.14
851 875 0.100146 GACAAGACCTACGCCGGTAG 59.900 60.000 1.90 0.00 44.72 3.18
862 886 1.271597 ACAAGGGCATGAGACAAGACC 60.272 52.381 0.00 0.00 29.07 3.85
884 908 4.332637 GCCAGCCAGTGTGCAACG 62.333 66.667 6.40 0.00 42.39 4.10
904 928 1.726791 CGTGTACAAAGTAGGCAGCAG 59.273 52.381 0.00 0.00 0.00 4.24
907 931 2.729882 GTCACGTGTACAAAGTAGGCAG 59.270 50.000 16.51 0.00 0.00 4.85
908 932 2.101082 TGTCACGTGTACAAAGTAGGCA 59.899 45.455 16.51 1.83 0.00 4.75
909 933 2.746269 TGTCACGTGTACAAAGTAGGC 58.254 47.619 16.51 0.00 0.00 3.93
910 934 5.107220 GGAAATGTCACGTGTACAAAGTAGG 60.107 44.000 16.51 0.00 0.00 3.18
994 1028 3.451556 TAGAGCTCGCCATGCCTGC 62.452 63.158 8.37 0.00 0.00 4.85
995 1029 1.300775 CTAGAGCTCGCCATGCCTG 60.301 63.158 8.37 0.00 0.00 4.85
996 1030 3.136750 CTAGAGCTCGCCATGCCT 58.863 61.111 8.37 0.00 0.00 4.75
1055 1089 1.271840 TACGGGCTTGCTTGGAGGAT 61.272 55.000 0.00 0.00 0.00 3.24
1099 1136 1.301716 AATGGCACGACAAGCGAGT 60.302 52.632 0.00 0.00 44.57 4.18
1100 1137 1.133253 CAATGGCACGACAAGCGAG 59.867 57.895 0.00 0.00 44.57 5.03
1101 1138 2.965147 GCAATGGCACGACAAGCGA 61.965 57.895 0.00 0.00 44.66 4.93
1114 1151 2.806198 CGCCGTGGCTTTGCAATG 60.806 61.111 9.55 3.50 39.32 2.82
1132 1169 4.796495 GTCATCCCCGGCACCACC 62.796 72.222 0.00 0.00 0.00 4.61
1290 1336 0.830023 TGATGACCTGGTCCGTGACA 60.830 55.000 23.42 12.87 33.68 3.58
1300 1346 0.459237 GAGACGCACCTGATGACCTG 60.459 60.000 0.00 0.00 0.00 4.00
1441 1487 4.012374 TCGTATTTCCTCACGTACTCCTT 58.988 43.478 0.00 0.00 39.18 3.36
1442 1488 3.614092 TCGTATTTCCTCACGTACTCCT 58.386 45.455 0.00 0.00 39.18 3.69
1443 1489 3.243002 CCTCGTATTTCCTCACGTACTCC 60.243 52.174 0.00 0.00 39.18 3.85
1485 1531 3.917760 CCGGAGGCGTCCAGATCC 61.918 72.222 24.34 0.00 46.14 3.36
1506 1552 2.433145 CTCTTGAAGCTGCGCGGA 60.433 61.111 23.20 3.19 0.00 5.54
1584 1630 3.793144 GCTGTTCTTGAGGCCGCG 61.793 66.667 0.00 0.00 0.00 6.46
1585 1631 3.435186 GGCTGTTCTTGAGGCCGC 61.435 66.667 0.00 0.00 35.08 6.53
1587 1633 2.747855 CCGGCTGTTCTTGAGGCC 60.748 66.667 0.00 0.00 41.02 5.19
1588 1634 2.747855 CCCGGCTGTTCTTGAGGC 60.748 66.667 0.00 0.00 0.00 4.70
1589 1635 2.045926 CCCCGGCTGTTCTTGAGG 60.046 66.667 0.00 0.00 0.00 3.86
1590 1636 2.045926 CCCCCGGCTGTTCTTGAG 60.046 66.667 0.00 0.00 0.00 3.02
1591 1637 4.344865 GCCCCCGGCTGTTCTTGA 62.345 66.667 0.00 0.00 46.69 3.02
1653 1699 1.141019 GTGCCACGGAGCGAAGATA 59.859 57.895 0.00 0.00 34.65 1.98
1803 1849 1.153628 GTTGGCGTCATAGAGCGGT 60.154 57.895 0.00 0.00 0.00 5.68
1878 1924 0.037882 TGCAGAGAGGAAGCTCGTTG 60.038 55.000 0.00 0.00 39.87 4.10
1884 1930 1.809209 GTCGCTGCAGAGAGGAAGC 60.809 63.158 21.21 4.80 0.00 3.86
2306 2361 1.920835 AGCCACTCCAAGGTCTCCC 60.921 63.158 0.00 0.00 0.00 4.30
2313 2368 1.239968 GCTTGTCCAGCCACTCCAAG 61.240 60.000 0.00 0.00 43.65 3.61
2314 2369 1.228245 GCTTGTCCAGCCACTCCAA 60.228 57.895 0.00 0.00 43.65 3.53
2607 2665 1.545706 GCAGGTTCTCGAAGGTCCCT 61.546 60.000 0.00 0.00 0.00 4.20
2612 2670 2.815647 GCGGCAGGTTCTCGAAGG 60.816 66.667 0.00 0.00 0.00 3.46
2694 2752 3.003173 TCCTCAACCAGCTCCCGG 61.003 66.667 0.00 0.00 0.00 5.73
2778 2836 1.063951 CAACTCGCACGTCGTCTACC 61.064 60.000 0.00 0.00 39.67 3.18
2786 2844 1.365699 ACAAAGTTCAACTCGCACGT 58.634 45.000 0.00 0.00 0.00 4.49
2799 2857 7.148639 CGTGCACATATCAGTTAGTTACAAAGT 60.149 37.037 18.64 0.00 0.00 2.66
2809 2867 4.672409 CTGACTCGTGCACATATCAGTTA 58.328 43.478 23.45 11.34 31.06 2.24
2810 2868 3.515630 CTGACTCGTGCACATATCAGTT 58.484 45.455 23.45 0.18 31.06 3.16
2811 2869 2.736719 GCTGACTCGTGCACATATCAGT 60.737 50.000 28.20 17.56 36.71 3.41
2812 2870 1.857217 GCTGACTCGTGCACATATCAG 59.143 52.381 25.77 25.77 37.28 2.90
2816 2874 2.092323 AGTAGCTGACTCGTGCACATA 58.908 47.619 18.64 2.91 29.95 2.29
2821 2879 3.219052 ACTAAAGTAGCTGACTCGTGC 57.781 47.619 0.00 0.00 37.44 5.34
2846 2905 2.823747 CCGGGTATATCATCCGTCTTGA 59.176 50.000 0.00 0.00 41.98 3.02
2852 2911 0.460311 GAGGCCGGGTATATCATCCG 59.540 60.000 2.18 0.00 43.05 4.18
2866 2925 5.595133 GTCTATATACTGGGATGTAGAGGCC 59.405 48.000 0.00 0.00 32.21 5.19
2868 2927 6.651086 TCGTCTATATACTGGGATGTAGAGG 58.349 44.000 10.83 10.83 37.04 3.69
2870 2929 8.162085 ACTTTCGTCTATATACTGGGATGTAGA 58.838 37.037 0.00 0.00 29.84 2.59
2871 2930 8.338072 ACTTTCGTCTATATACTGGGATGTAG 57.662 38.462 0.00 0.00 0.00 2.74
2872 2931 9.797642 TTACTTTCGTCTATATACTGGGATGTA 57.202 33.333 0.00 0.00 0.00 2.29
2873 2932 8.701908 TTACTTTCGTCTATATACTGGGATGT 57.298 34.615 0.00 0.00 0.00 3.06
2874 2933 9.976511 TTTTACTTTCGTCTATATACTGGGATG 57.023 33.333 0.00 0.00 0.00 3.51
2904 2963 9.769093 CGATTTCAATATTCGAAGTTTAAGGTT 57.231 29.630 3.35 0.00 34.92 3.50
2905 2964 9.158233 TCGATTTCAATATTCGAAGTTTAAGGT 57.842 29.630 3.35 0.00 38.80 3.50
2906 2965 9.422196 GTCGATTTCAATATTCGAAGTTTAAGG 57.578 33.333 3.35 0.00 42.82 2.69
2907 2966 9.967245 TGTCGATTTCAATATTCGAAGTTTAAG 57.033 29.630 3.35 0.00 42.82 1.85
2908 2967 9.749490 GTGTCGATTTCAATATTCGAAGTTTAA 57.251 29.630 3.35 0.00 42.82 1.52
2909 2968 8.927721 TGTGTCGATTTCAATATTCGAAGTTTA 58.072 29.630 3.35 0.00 42.82 2.01
2910 2969 7.802738 TGTGTCGATTTCAATATTCGAAGTTT 58.197 30.769 3.35 0.00 42.82 2.66
2911 2970 7.359262 TGTGTCGATTTCAATATTCGAAGTT 57.641 32.000 3.35 0.00 42.82 2.66
2912 2971 6.961359 TGTGTCGATTTCAATATTCGAAGT 57.039 33.333 3.35 0.00 42.82 3.01
2930 2989 5.250235 TGGATTAGAGAGTTCGATGTGTC 57.750 43.478 0.00 0.00 0.00 3.67
2931 2990 4.098654 CCTGGATTAGAGAGTTCGATGTGT 59.901 45.833 0.00 0.00 0.00 3.72
2932 2991 4.098654 ACCTGGATTAGAGAGTTCGATGTG 59.901 45.833 0.00 0.00 0.00 3.21
2933 2992 4.282496 ACCTGGATTAGAGAGTTCGATGT 58.718 43.478 0.00 0.00 0.00 3.06
2934 2993 4.927978 ACCTGGATTAGAGAGTTCGATG 57.072 45.455 0.00 0.00 0.00 3.84
2935 2994 8.887264 AATATACCTGGATTAGAGAGTTCGAT 57.113 34.615 0.00 0.00 0.00 3.59
2936 2995 8.707796 AAATATACCTGGATTAGAGAGTTCGA 57.292 34.615 0.00 0.00 0.00 3.71
2949 3008 9.561069 GCTCTCAAGATTTAAAATATACCTGGA 57.439 33.333 0.00 0.00 0.00 3.86
2950 3009 8.499162 CGCTCTCAAGATTTAAAATATACCTGG 58.501 37.037 0.00 0.00 0.00 4.45
2951 3010 9.046296 ACGCTCTCAAGATTTAAAATATACCTG 57.954 33.333 0.00 0.00 0.00 4.00
2952 3011 9.614792 AACGCTCTCAAGATTTAAAATATACCT 57.385 29.630 0.00 0.00 0.00 3.08
2957 3016 9.444600 AGGTAAACGCTCTCAAGATTTAAAATA 57.555 29.630 0.00 0.00 0.00 1.40
2958 3017 8.237267 CAGGTAAACGCTCTCAAGATTTAAAAT 58.763 33.333 0.00 0.00 0.00 1.82
2959 3018 7.308348 CCAGGTAAACGCTCTCAAGATTTAAAA 60.308 37.037 0.00 0.00 0.00 1.52
2960 3019 6.148811 CCAGGTAAACGCTCTCAAGATTTAAA 59.851 38.462 0.00 0.00 0.00 1.52
2961 3020 5.642063 CCAGGTAAACGCTCTCAAGATTTAA 59.358 40.000 0.00 0.00 0.00 1.52
2962 3021 5.175859 CCAGGTAAACGCTCTCAAGATTTA 58.824 41.667 0.00 0.00 0.00 1.40
2963 3022 4.003648 CCAGGTAAACGCTCTCAAGATTT 58.996 43.478 0.00 0.00 0.00 2.17
2964 3023 3.008049 ACCAGGTAAACGCTCTCAAGATT 59.992 43.478 0.00 0.00 0.00 2.40
2965 3024 2.567615 ACCAGGTAAACGCTCTCAAGAT 59.432 45.455 0.00 0.00 0.00 2.40
2966 3025 1.968493 ACCAGGTAAACGCTCTCAAGA 59.032 47.619 0.00 0.00 0.00 3.02
2967 3026 2.457366 ACCAGGTAAACGCTCTCAAG 57.543 50.000 0.00 0.00 0.00 3.02
2968 3027 4.501071 GAATACCAGGTAAACGCTCTCAA 58.499 43.478 2.53 0.00 0.00 3.02
2969 3028 3.428452 CGAATACCAGGTAAACGCTCTCA 60.428 47.826 2.53 0.00 0.00 3.27
2970 3029 3.114065 CGAATACCAGGTAAACGCTCTC 58.886 50.000 2.53 0.00 0.00 3.20
2971 3030 2.737679 GCGAATACCAGGTAAACGCTCT 60.738 50.000 29.99 4.17 40.38 4.09
2972 3031 1.591619 GCGAATACCAGGTAAACGCTC 59.408 52.381 29.99 14.20 40.38 5.03
2973 3032 1.206371 AGCGAATACCAGGTAAACGCT 59.794 47.619 32.33 32.33 44.50 5.07
2974 3033 1.591619 GAGCGAATACCAGGTAAACGC 59.408 52.381 30.07 30.07 42.10 4.84
2975 3034 1.850441 CGAGCGAATACCAGGTAAACG 59.150 52.381 18.60 18.60 0.00 3.60
2976 3035 1.591619 GCGAGCGAATACCAGGTAAAC 59.408 52.381 2.53 0.00 0.00 2.01
2977 3036 1.479323 AGCGAGCGAATACCAGGTAAA 59.521 47.619 2.53 0.00 0.00 2.01
2978 3037 1.066605 GAGCGAGCGAATACCAGGTAA 59.933 52.381 2.53 0.00 0.00 2.85
2979 3038 0.666913 GAGCGAGCGAATACCAGGTA 59.333 55.000 0.39 0.39 0.00 3.08
2980 3039 1.038130 AGAGCGAGCGAATACCAGGT 61.038 55.000 0.00 0.00 0.00 4.00
2981 3040 0.596083 CAGAGCGAGCGAATACCAGG 60.596 60.000 0.00 0.00 0.00 4.45
2982 3041 1.211818 GCAGAGCGAGCGAATACCAG 61.212 60.000 0.00 0.00 0.00 4.00
2983 3042 1.226974 GCAGAGCGAGCGAATACCA 60.227 57.895 0.00 0.00 0.00 3.25
2984 3043 0.528684 AAGCAGAGCGAGCGAATACC 60.529 55.000 0.00 0.00 37.01 2.73
2985 3044 1.281899 AAAGCAGAGCGAGCGAATAC 58.718 50.000 0.00 0.00 37.01 1.89
2986 3045 1.660607 CAAAAGCAGAGCGAGCGAATA 59.339 47.619 0.00 0.00 37.01 1.75
2987 3046 0.445436 CAAAAGCAGAGCGAGCGAAT 59.555 50.000 0.00 0.00 37.01 3.34
2988 3047 0.880278 ACAAAAGCAGAGCGAGCGAA 60.880 50.000 0.00 0.00 37.01 4.70
2989 3048 0.880278 AACAAAAGCAGAGCGAGCGA 60.880 50.000 0.00 0.00 37.01 4.93
2990 3049 0.040958 AAACAAAAGCAGAGCGAGCG 60.041 50.000 0.00 0.00 37.01 5.03
2991 3050 2.125461 AAAACAAAAGCAGAGCGAGC 57.875 45.000 0.00 0.00 0.00 5.03
2992 3051 3.957468 AGAAAAACAAAAGCAGAGCGAG 58.043 40.909 0.00 0.00 0.00 5.03
2993 3052 4.370364 AAGAAAAACAAAAGCAGAGCGA 57.630 36.364 0.00 0.00 0.00 4.93
2994 3053 5.454736 AAAAGAAAAACAAAAGCAGAGCG 57.545 34.783 0.00 0.00 0.00 5.03
2995 3054 9.425893 GAAATAAAAGAAAAACAAAAGCAGAGC 57.574 29.630 0.00 0.00 0.00 4.09
2996 3055 9.920826 GGAAATAAAAGAAAAACAAAAGCAGAG 57.079 29.630 0.00 0.00 0.00 3.35
2997 3056 9.665719 AGGAAATAAAAGAAAAACAAAAGCAGA 57.334 25.926 0.00 0.00 0.00 4.26
3060 3119 9.715121 AGTGAAATAACAAAGTATAACGAAGGA 57.285 29.630 0.00 0.00 0.00 3.36
3061 3120 9.755064 CAGTGAAATAACAAAGTATAACGAAGG 57.245 33.333 0.00 0.00 0.00 3.46
3062 3121 9.755064 CCAGTGAAATAACAAAGTATAACGAAG 57.245 33.333 0.00 0.00 0.00 3.79
3063 3122 9.275398 ACCAGTGAAATAACAAAGTATAACGAA 57.725 29.630 0.00 0.00 0.00 3.85
3064 3123 8.836268 ACCAGTGAAATAACAAAGTATAACGA 57.164 30.769 0.00 0.00 0.00 3.85
3065 3124 9.887406 AAACCAGTGAAATAACAAAGTATAACG 57.113 29.630 0.00 0.00 0.00 3.18
3071 3130 9.313118 GAATGAAAACCAGTGAAATAACAAAGT 57.687 29.630 0.00 0.00 0.00 2.66
3072 3131 9.533253 AGAATGAAAACCAGTGAAATAACAAAG 57.467 29.630 0.00 0.00 0.00 2.77
3073 3132 9.883142 AAGAATGAAAACCAGTGAAATAACAAA 57.117 25.926 0.00 0.00 0.00 2.83
3074 3133 9.528018 GAAGAATGAAAACCAGTGAAATAACAA 57.472 29.630 0.00 0.00 0.00 2.83
3075 3134 7.860373 CGAAGAATGAAAACCAGTGAAATAACA 59.140 33.333 0.00 0.00 0.00 2.41
3076 3135 7.860872 ACGAAGAATGAAAACCAGTGAAATAAC 59.139 33.333 0.00 0.00 0.00 1.89
3077 3136 7.936584 ACGAAGAATGAAAACCAGTGAAATAA 58.063 30.769 0.00 0.00 0.00 1.40
3078 3137 7.504924 ACGAAGAATGAAAACCAGTGAAATA 57.495 32.000 0.00 0.00 0.00 1.40
3079 3138 6.391227 ACGAAGAATGAAAACCAGTGAAAT 57.609 33.333 0.00 0.00 0.00 2.17
3080 3139 5.828299 ACGAAGAATGAAAACCAGTGAAA 57.172 34.783 0.00 0.00 0.00 2.69
3081 3140 5.577835 CAACGAAGAATGAAAACCAGTGAA 58.422 37.500 0.00 0.00 0.00 3.18
3082 3141 4.497340 GCAACGAAGAATGAAAACCAGTGA 60.497 41.667 0.00 0.00 0.00 3.41
3083 3142 3.730715 GCAACGAAGAATGAAAACCAGTG 59.269 43.478 0.00 0.00 0.00 3.66
3084 3143 3.380004 TGCAACGAAGAATGAAAACCAGT 59.620 39.130 0.00 0.00 0.00 4.00
3085 3144 3.963665 TGCAACGAAGAATGAAAACCAG 58.036 40.909 0.00 0.00 0.00 4.00
3086 3145 4.582701 ATGCAACGAAGAATGAAAACCA 57.417 36.364 0.00 0.00 0.00 3.67
3087 3146 5.905480 AAATGCAACGAAGAATGAAAACC 57.095 34.783 0.00 0.00 0.00 3.27
3088 3147 9.862585 AATAAAAATGCAACGAAGAATGAAAAC 57.137 25.926 0.00 0.00 0.00 2.43
3116 3175 9.965824 GAAGAAAATCAAGGAAGAAACACAATA 57.034 29.630 0.00 0.00 0.00 1.90
3117 3176 7.649306 CGAAGAAAATCAAGGAAGAAACACAAT 59.351 33.333 0.00 0.00 0.00 2.71
3118 3177 6.972328 CGAAGAAAATCAAGGAAGAAACACAA 59.028 34.615 0.00 0.00 0.00 3.33
3119 3178 6.094881 ACGAAGAAAATCAAGGAAGAAACACA 59.905 34.615 0.00 0.00 0.00 3.72
3120 3179 6.495706 ACGAAGAAAATCAAGGAAGAAACAC 58.504 36.000 0.00 0.00 0.00 3.32
3121 3180 6.693315 ACGAAGAAAATCAAGGAAGAAACA 57.307 33.333 0.00 0.00 0.00 2.83
3122 3181 9.118236 CAATACGAAGAAAATCAAGGAAGAAAC 57.882 33.333 0.00 0.00 0.00 2.78
3123 3182 8.846211 ACAATACGAAGAAAATCAAGGAAGAAA 58.154 29.630 0.00 0.00 0.00 2.52
3124 3183 8.391075 ACAATACGAAGAAAATCAAGGAAGAA 57.609 30.769 0.00 0.00 0.00 2.52
3125 3184 7.979444 ACAATACGAAGAAAATCAAGGAAGA 57.021 32.000 0.00 0.00 0.00 2.87
3126 3185 9.463443 AAAACAATACGAAGAAAATCAAGGAAG 57.537 29.630 0.00 0.00 0.00 3.46
3127 3186 9.810545 AAAAACAATACGAAGAAAATCAAGGAA 57.189 25.926 0.00 0.00 0.00 3.36
3128 3187 9.458374 GAAAAACAATACGAAGAAAATCAAGGA 57.542 29.630 0.00 0.00 0.00 3.36
3129 3188 8.699749 GGAAAAACAATACGAAGAAAATCAAGG 58.300 33.333 0.00 0.00 0.00 3.61
3130 3189 9.463443 AGGAAAAACAATACGAAGAAAATCAAG 57.537 29.630 0.00 0.00 0.00 3.02
3131 3190 9.810545 AAGGAAAAACAATACGAAGAAAATCAA 57.189 25.926 0.00 0.00 0.00 2.57
3132 3191 9.810545 AAAGGAAAAACAATACGAAGAAAATCA 57.189 25.926 0.00 0.00 0.00 2.57
3141 3200 9.857957 ACAAAAAGTAAAGGAAAAACAATACGA 57.142 25.926 0.00 0.00 0.00 3.43
3151 3210 8.917655 CGACAAAGAAACAAAAAGTAAAGGAAA 58.082 29.630 0.00 0.00 0.00 3.13
3152 3211 7.542824 CCGACAAAGAAACAAAAAGTAAAGGAA 59.457 33.333 0.00 0.00 0.00 3.36
3153 3212 7.030768 CCGACAAAGAAACAAAAAGTAAAGGA 58.969 34.615 0.00 0.00 0.00 3.36
3154 3213 6.237728 GCCGACAAAGAAACAAAAAGTAAAGG 60.238 38.462 0.00 0.00 0.00 3.11
3155 3214 6.530181 AGCCGACAAAGAAACAAAAAGTAAAG 59.470 34.615 0.00 0.00 0.00 1.85
3156 3215 6.391537 AGCCGACAAAGAAACAAAAAGTAAA 58.608 32.000 0.00 0.00 0.00 2.01
3157 3216 5.956642 AGCCGACAAAGAAACAAAAAGTAA 58.043 33.333 0.00 0.00 0.00 2.24
3158 3217 5.355910 AGAGCCGACAAAGAAACAAAAAGTA 59.644 36.000 0.00 0.00 0.00 2.24
3159 3218 4.157840 AGAGCCGACAAAGAAACAAAAAGT 59.842 37.500 0.00 0.00 0.00 2.66
3160 3219 4.672409 AGAGCCGACAAAGAAACAAAAAG 58.328 39.130 0.00 0.00 0.00 2.27
3161 3220 4.712122 AGAGCCGACAAAGAAACAAAAA 57.288 36.364 0.00 0.00 0.00 1.94
3162 3221 5.821516 TTAGAGCCGACAAAGAAACAAAA 57.178 34.783 0.00 0.00 0.00 2.44
3163 3222 6.038825 TCAATTAGAGCCGACAAAGAAACAAA 59.961 34.615 0.00 0.00 0.00 2.83
3164 3223 5.529430 TCAATTAGAGCCGACAAAGAAACAA 59.471 36.000 0.00 0.00 0.00 2.83
3165 3224 5.060506 TCAATTAGAGCCGACAAAGAAACA 58.939 37.500 0.00 0.00 0.00 2.83
3166 3225 5.607119 TCAATTAGAGCCGACAAAGAAAC 57.393 39.130 0.00 0.00 0.00 2.78
3167 3226 6.817765 AATCAATTAGAGCCGACAAAGAAA 57.182 33.333 0.00 0.00 0.00 2.52
3168 3227 6.655003 AGAAATCAATTAGAGCCGACAAAGAA 59.345 34.615 0.00 0.00 0.00 2.52
3169 3228 6.173339 AGAAATCAATTAGAGCCGACAAAGA 58.827 36.000 0.00 0.00 0.00 2.52
3170 3229 6.428385 AGAAATCAATTAGAGCCGACAAAG 57.572 37.500 0.00 0.00 0.00 2.77
3171 3230 6.817765 AAGAAATCAATTAGAGCCGACAAA 57.182 33.333 0.00 0.00 0.00 2.83
3172 3231 6.655003 AGAAAGAAATCAATTAGAGCCGACAA 59.345 34.615 0.00 0.00 0.00 3.18
3173 3232 6.173339 AGAAAGAAATCAATTAGAGCCGACA 58.827 36.000 0.00 0.00 0.00 4.35
3174 3233 6.670077 AGAAAGAAATCAATTAGAGCCGAC 57.330 37.500 0.00 0.00 0.00 4.79
3175 3234 6.878923 TCAAGAAAGAAATCAATTAGAGCCGA 59.121 34.615 0.00 0.00 0.00 5.54
3176 3235 6.963805 GTCAAGAAAGAAATCAATTAGAGCCG 59.036 38.462 0.00 0.00 0.00 5.52
3177 3236 7.752686 GTGTCAAGAAAGAAATCAATTAGAGCC 59.247 37.037 0.00 0.00 0.00 4.70
3178 3237 8.292448 TGTGTCAAGAAAGAAATCAATTAGAGC 58.708 33.333 0.00 0.00 0.00 4.09
3181 3240 9.903682 ACATGTGTCAAGAAAGAAATCAATTAG 57.096 29.630 0.00 0.00 0.00 1.73
3182 3241 9.897744 GACATGTGTCAAGAAAGAAATCAATTA 57.102 29.630 1.15 0.00 44.18 1.40
3183 3242 8.807667 GACATGTGTCAAGAAAGAAATCAATT 57.192 30.769 1.15 0.00 44.18 2.32
3223 3282 9.290988 TGTGTGACCTAAAAATGTACATTATGT 57.709 29.630 21.07 13.18 0.00 2.29
3226 3285 9.508642 TCATGTGTGACCTAAAAATGTACATTA 57.491 29.630 21.07 5.50 0.00 1.90
3227 3286 8.402798 TCATGTGTGACCTAAAAATGTACATT 57.597 30.769 15.47 15.47 0.00 2.71
3228 3287 7.994425 TCATGTGTGACCTAAAAATGTACAT 57.006 32.000 1.41 1.41 0.00 2.29
3229 3288 7.809546 TTCATGTGTGACCTAAAAATGTACA 57.190 32.000 0.00 0.00 33.11 2.90
3230 3289 8.132362 TGTTTCATGTGTGACCTAAAAATGTAC 58.868 33.333 0.00 0.00 33.11 2.90
3231 3290 8.226819 TGTTTCATGTGTGACCTAAAAATGTA 57.773 30.769 0.00 0.00 33.11 2.29
3232 3291 7.106439 TGTTTCATGTGTGACCTAAAAATGT 57.894 32.000 0.00 0.00 33.11 2.71
3233 3292 8.592105 AATGTTTCATGTGTGACCTAAAAATG 57.408 30.769 0.00 0.00 33.11 2.32
3234 3293 9.612066 AAAATGTTTCATGTGTGACCTAAAAAT 57.388 25.926 0.00 0.00 33.11 1.82
3235 3294 9.442047 AAAAATGTTTCATGTGTGACCTAAAAA 57.558 25.926 0.00 0.00 33.11 1.94
3316 3375 7.607250 ACCATGTACTCAAAAAGTGTTGAAAA 58.393 30.769 0.00 0.00 39.11 2.29
3317 3376 7.164230 ACCATGTACTCAAAAAGTGTTGAAA 57.836 32.000 0.00 0.00 39.11 2.69
3318 3377 6.767524 ACCATGTACTCAAAAAGTGTTGAA 57.232 33.333 0.00 0.00 39.11 2.69
3319 3378 7.337184 TGTTACCATGTACTCAAAAAGTGTTGA 59.663 33.333 0.00 0.00 39.11 3.18
3320 3379 7.476667 TGTTACCATGTACTCAAAAAGTGTTG 58.523 34.615 0.00 0.00 39.11 3.33
3321 3380 7.633193 TGTTACCATGTACTCAAAAAGTGTT 57.367 32.000 0.00 0.00 39.11 3.32
3322 3381 7.817418 ATGTTACCATGTACTCAAAAAGTGT 57.183 32.000 0.00 0.00 39.11 3.55
3323 3382 8.567948 AGAATGTTACCATGTACTCAAAAAGTG 58.432 33.333 0.00 0.00 39.11 3.16
3324 3383 8.691661 AGAATGTTACCATGTACTCAAAAAGT 57.308 30.769 0.00 0.00 42.33 2.66
3325 3384 9.612620 GAAGAATGTTACCATGTACTCAAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
3326 3385 8.573035 GGAAGAATGTTACCATGTACTCAAAAA 58.427 33.333 0.00 0.00 0.00 1.94
3327 3386 7.721842 TGGAAGAATGTTACCATGTACTCAAAA 59.278 33.333 0.00 0.00 0.00 2.44
3328 3387 7.227873 TGGAAGAATGTTACCATGTACTCAAA 58.772 34.615 0.00 0.00 0.00 2.69
3329 3388 6.774673 TGGAAGAATGTTACCATGTACTCAA 58.225 36.000 0.00 0.00 0.00 3.02
3330 3389 6.367374 TGGAAGAATGTTACCATGTACTCA 57.633 37.500 0.00 0.00 0.00 3.41
3331 3390 7.681939 TTTGGAAGAATGTTACCATGTACTC 57.318 36.000 0.00 0.00 32.31 2.59
3332 3391 9.920946 ATATTTGGAAGAATGTTACCATGTACT 57.079 29.630 0.00 0.00 32.31 2.73
3335 3394 9.354673 CCTATATTTGGAAGAATGTTACCATGT 57.645 33.333 0.00 0.00 32.31 3.21
3336 3395 9.354673 ACCTATATTTGGAAGAATGTTACCATG 57.645 33.333 0.00 0.00 32.31 3.66
3337 3396 9.936329 AACCTATATTTGGAAGAATGTTACCAT 57.064 29.630 0.00 0.00 32.31 3.55
3338 3397 9.762381 AAACCTATATTTGGAAGAATGTTACCA 57.238 29.630 2.01 0.00 0.00 3.25
3340 3399 9.516314 GCAAACCTATATTTGGAAGAATGTTAC 57.484 33.333 0.84 0.00 39.52 2.50
3341 3400 9.249053 TGCAAACCTATATTTGGAAGAATGTTA 57.751 29.630 0.84 0.00 37.02 2.41
3342 3401 8.133024 TGCAAACCTATATTTGGAAGAATGTT 57.867 30.769 0.84 0.00 37.02 2.71
3343 3402 7.716799 TGCAAACCTATATTTGGAAGAATGT 57.283 32.000 0.84 0.00 37.02 2.71
3344 3403 9.603921 AAATGCAAACCTATATTTGGAAGAATG 57.396 29.630 0.00 0.00 42.26 2.67
3346 3405 9.651913 GAAAATGCAAACCTATATTTGGAAGAA 57.348 29.630 0.00 0.00 42.26 2.52
3347 3406 9.034800 AGAAAATGCAAACCTATATTTGGAAGA 57.965 29.630 0.00 0.00 42.26 2.87
3348 3407 9.657419 AAGAAAATGCAAACCTATATTTGGAAG 57.343 29.630 0.00 0.00 42.26 3.46
3604 3663 6.992063 ACATGTGTTTGTGGCATTTAAAAA 57.008 29.167 0.00 0.00 0.00 1.94
3605 3664 6.992063 AACATGTGTTTGTGGCATTTAAAA 57.008 29.167 0.00 0.00 33.93 1.52
3606 3665 6.992063 AAACATGTGTTTGTGGCATTTAAA 57.008 29.167 10.11 0.00 45.55 1.52
3607 3666 6.595326 TCAAAACATGTGTTTGTGGCATTTAA 59.405 30.769 21.90 7.16 46.47 1.52
3608 3667 6.108687 TCAAAACATGTGTTTGTGGCATTTA 58.891 32.000 21.90 7.62 46.47 1.40
3609 3668 4.940046 TCAAAACATGTGTTTGTGGCATTT 59.060 33.333 21.90 6.31 46.47 2.32
3610 3669 4.511527 TCAAAACATGTGTTTGTGGCATT 58.488 34.783 21.90 1.30 46.47 3.56
3611 3670 4.134379 TCAAAACATGTGTTTGTGGCAT 57.866 36.364 21.90 0.00 46.47 4.40
3612 3671 3.599730 TCAAAACATGTGTTTGTGGCA 57.400 38.095 21.90 9.26 46.47 4.92
3613 3672 4.935885 TTTCAAAACATGTGTTTGTGGC 57.064 36.364 21.90 0.00 46.47 5.01
3614 3673 6.659361 TGATTTCAAAACATGTGTTTGTGG 57.341 33.333 21.90 5.63 46.47 4.17
3650 3709 9.360093 TCGTACACTCAAAATGTTGAAAAATTT 57.640 25.926 0.00 0.00 43.18 1.82
3651 3710 8.918961 TCGTACACTCAAAATGTTGAAAAATT 57.081 26.923 0.00 0.00 43.18 1.82
3652 3711 8.918961 TTCGTACACTCAAAATGTTGAAAAAT 57.081 26.923 0.00 0.00 43.18 1.82
3653 3712 8.640291 GTTTCGTACACTCAAAATGTTGAAAAA 58.360 29.630 0.00 0.00 43.18 1.94
3654 3713 7.808381 TGTTTCGTACACTCAAAATGTTGAAAA 59.192 29.630 0.00 0.00 43.18 2.29
3655 3714 7.306213 TGTTTCGTACACTCAAAATGTTGAAA 58.694 30.769 0.00 0.00 43.18 2.69
3656 3715 6.843208 TGTTTCGTACACTCAAAATGTTGAA 58.157 32.000 0.00 0.00 43.18 2.69
3657 3716 6.424176 TGTTTCGTACACTCAAAATGTTGA 57.576 33.333 0.00 0.00 41.57 3.18
3658 3717 7.678194 ATTGTTTCGTACACTCAAAATGTTG 57.322 32.000 0.00 0.00 36.21 3.33
3659 3718 8.696410 AAATTGTTTCGTACACTCAAAATGTT 57.304 26.923 0.00 0.00 36.21 2.71
3660 3719 8.696410 AAAATTGTTTCGTACACTCAAAATGT 57.304 26.923 0.00 0.00 36.21 2.71
3690 3749 9.733219 TGTACGTAATATATTCGTGTGATTCAA 57.267 29.630 22.25 6.98 38.27 2.69
3691 3750 9.902196 ATGTACGTAATATATTCGTGTGATTCA 57.098 29.630 22.25 14.99 38.27 2.57
3739 3798 9.474920 CAAGAAAAATGTTAGTGGCATCTAAAA 57.525 29.630 9.92 6.64 32.70 1.52
3740 3799 7.598493 GCAAGAAAAATGTTAGTGGCATCTAAA 59.402 33.333 9.92 4.01 32.70 1.85
3741 3800 7.090173 GCAAGAAAAATGTTAGTGGCATCTAA 58.910 34.615 0.00 0.00 0.00 2.10
3742 3801 6.350110 GGCAAGAAAAATGTTAGTGGCATCTA 60.350 38.462 0.00 0.00 0.00 1.98
3743 3802 5.473039 GCAAGAAAAATGTTAGTGGCATCT 58.527 37.500 0.00 0.00 0.00 2.90
3744 3803 4.627035 GGCAAGAAAAATGTTAGTGGCATC 59.373 41.667 0.00 0.00 0.00 3.91
3745 3804 4.040217 TGGCAAGAAAAATGTTAGTGGCAT 59.960 37.500 0.00 0.00 35.46 4.40
3746 3805 3.386078 TGGCAAGAAAAATGTTAGTGGCA 59.614 39.130 0.00 0.00 37.69 4.92
3747 3806 3.988819 TGGCAAGAAAAATGTTAGTGGC 58.011 40.909 0.00 0.00 0.00 5.01
3748 3807 7.012232 ACAAATTGGCAAGAAAAATGTTAGTGG 59.988 33.333 5.96 0.00 0.00 4.00
3749 3808 7.918643 ACAAATTGGCAAGAAAAATGTTAGTG 58.081 30.769 5.96 0.00 0.00 2.74
3750 3809 8.504812 AACAAATTGGCAAGAAAAATGTTAGT 57.495 26.923 5.96 0.00 0.00 2.24
3751 3810 8.610896 TGAACAAATTGGCAAGAAAAATGTTAG 58.389 29.630 5.96 0.00 0.00 2.34
3752 3811 8.498054 TGAACAAATTGGCAAGAAAAATGTTA 57.502 26.923 5.96 0.00 0.00 2.41
3753 3812 7.388460 TGAACAAATTGGCAAGAAAAATGTT 57.612 28.000 5.96 9.85 0.00 2.71
3754 3813 6.038492 CCTGAACAAATTGGCAAGAAAAATGT 59.962 34.615 5.96 1.66 0.00 2.71
3755 3814 6.038492 ACCTGAACAAATTGGCAAGAAAAATG 59.962 34.615 5.96 1.05 0.00 2.32
3756 3815 6.121590 ACCTGAACAAATTGGCAAGAAAAAT 58.878 32.000 5.96 0.00 0.00 1.82
3757 3816 5.495640 ACCTGAACAAATTGGCAAGAAAAA 58.504 33.333 5.96 0.00 0.00 1.94
3758 3817 5.096443 ACCTGAACAAATTGGCAAGAAAA 57.904 34.783 5.96 0.00 0.00 2.29
3759 3818 4.751767 ACCTGAACAAATTGGCAAGAAA 57.248 36.364 5.96 0.00 0.00 2.52
3760 3819 4.751767 AACCTGAACAAATTGGCAAGAA 57.248 36.364 5.96 0.00 0.00 2.52
3761 3820 4.442753 GGAAACCTGAACAAATTGGCAAGA 60.443 41.667 5.96 0.00 0.00 3.02
3762 3821 3.809279 GGAAACCTGAACAAATTGGCAAG 59.191 43.478 5.96 0.00 0.00 4.01
3763 3822 3.198635 TGGAAACCTGAACAAATTGGCAA 59.801 39.130 0.68 0.68 0.00 4.52
3764 3823 2.768527 TGGAAACCTGAACAAATTGGCA 59.231 40.909 0.00 0.00 0.00 4.92
3765 3824 3.467374 TGGAAACCTGAACAAATTGGC 57.533 42.857 0.00 0.00 0.00 4.52
3766 3825 6.940831 AATTTGGAAACCTGAACAAATTGG 57.059 33.333 11.90 0.00 46.07 3.16
3767 3826 7.760437 ACAAATTTGGAAACCTGAACAAATTG 58.240 30.769 21.74 10.31 46.71 2.32
3769 3828 7.066887 GGAACAAATTTGGAAACCTGAACAAAT 59.933 33.333 21.74 0.00 43.20 2.32
3770 3829 6.372937 GGAACAAATTTGGAAACCTGAACAAA 59.627 34.615 21.74 0.00 37.25 2.83
3771 3830 5.877564 GGAACAAATTTGGAAACCTGAACAA 59.122 36.000 21.74 0.00 0.00 2.83
3772 3831 5.188751 AGGAACAAATTTGGAAACCTGAACA 59.811 36.000 21.74 0.00 0.00 3.18
3773 3832 5.670485 AGGAACAAATTTGGAAACCTGAAC 58.330 37.500 21.74 1.25 0.00 3.18
3774 3833 5.948742 AGGAACAAATTTGGAAACCTGAA 57.051 34.783 21.74 0.00 0.00 3.02
3775 3834 7.610580 AATAGGAACAAATTTGGAAACCTGA 57.389 32.000 21.74 12.13 0.00 3.86
3776 3835 8.675705 AAAATAGGAACAAATTTGGAAACCTG 57.324 30.769 21.74 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.