Multiple sequence alignment - TraesCS6D01G048100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G048100 | chr6D | 100.000 | 3052 | 0 | 0 | 3164 | 6215 | 22763563 | 22760512 | 0.000000e+00 | 5637.0 |
1 | TraesCS6D01G048100 | chr6D | 100.000 | 2741 | 0 | 0 | 1 | 2741 | 22766726 | 22763986 | 0.000000e+00 | 5062.0 |
2 | TraesCS6D01G048100 | chr6D | 88.783 | 1150 | 103 | 20 | 3882 | 5015 | 23397926 | 23399065 | 0.000000e+00 | 1386.0 |
3 | TraesCS6D01G048100 | chr6D | 87.865 | 1096 | 120 | 9 | 4118 | 5211 | 23642048 | 23640964 | 0.000000e+00 | 1275.0 |
4 | TraesCS6D01G048100 | chr6D | 86.941 | 1095 | 129 | 8 | 4118 | 5211 | 23632004 | 23630923 | 0.000000e+00 | 1218.0 |
5 | TraesCS6D01G048100 | chr6D | 83.784 | 296 | 33 | 11 | 5906 | 6196 | 23767256 | 23767541 | 3.690000e-67 | 267.0 |
6 | TraesCS6D01G048100 | chr6D | 89.806 | 206 | 21 | 0 | 5003 | 5208 | 23415080 | 23415285 | 1.330000e-66 | 265.0 |
7 | TraesCS6D01G048100 | chr6D | 96.753 | 154 | 5 | 0 | 1 | 154 | 251890336 | 251890183 | 2.220000e-64 | 257.0 |
8 | TraesCS6D01G048100 | chr6D | 85.625 | 160 | 23 | 0 | 284 | 443 | 22766359 | 22766200 | 1.070000e-37 | 169.0 |
9 | TraesCS6D01G048100 | chr6D | 85.625 | 160 | 23 | 0 | 368 | 527 | 22766443 | 22766284 | 1.070000e-37 | 169.0 |
10 | TraesCS6D01G048100 | chr6D | 91.089 | 101 | 9 | 0 | 4002 | 4102 | 23748858 | 23748758 | 3.020000e-28 | 137.0 |
11 | TraesCS6D01G048100 | chr6D | 92.308 | 91 | 7 | 0 | 4012 | 4102 | 23642187 | 23642097 | 5.060000e-26 | 130.0 |
12 | TraesCS6D01G048100 | chr6D | 83.465 | 127 | 14 | 6 | 3731 | 3854 | 23397804 | 23397926 | 1.830000e-20 | 111.0 |
13 | TraesCS6D01G048100 | chrUn | 95.648 | 1861 | 52 | 9 | 880 | 2737 | 80168806 | 80170640 | 0.000000e+00 | 2961.0 |
14 | TraesCS6D01G048100 | chrUn | 92.023 | 1053 | 32 | 16 | 5205 | 6215 | 80171190 | 80172232 | 0.000000e+00 | 1432.0 |
15 | TraesCS6D01G048100 | chrUn | 98.699 | 538 | 7 | 0 | 3233 | 3770 | 80170639 | 80171176 | 0.000000e+00 | 955.0 |
16 | TraesCS6D01G048100 | chrUn | 84.262 | 413 | 41 | 11 | 494 | 893 | 80168374 | 80168775 | 1.260000e-101 | 381.0 |
17 | TraesCS6D01G048100 | chrUn | 92.045 | 176 | 12 | 2 | 1 | 176 | 69001834 | 69002007 | 4.810000e-61 | 246.0 |
18 | TraesCS6D01G048100 | chr6A | 89.057 | 1453 | 108 | 21 | 3782 | 5208 | 22171615 | 22173042 | 0.000000e+00 | 1755.0 |
19 | TraesCS6D01G048100 | chr6A | 87.420 | 1097 | 123 | 11 | 4118 | 5211 | 22200830 | 22199746 | 0.000000e+00 | 1247.0 |
20 | TraesCS6D01G048100 | chr6A | 87.238 | 1097 | 126 | 10 | 4116 | 5211 | 22193318 | 22192235 | 0.000000e+00 | 1238.0 |
21 | TraesCS6D01G048100 | chr6A | 82.944 | 557 | 66 | 18 | 4657 | 5209 | 22351505 | 22350974 | 5.640000e-130 | 475.0 |
22 | TraesCS6D01G048100 | chr6A | 85.117 | 383 | 32 | 15 | 5830 | 6198 | 22439199 | 22439570 | 9.840000e-98 | 368.0 |
23 | TraesCS6D01G048100 | chr6A | 82.684 | 231 | 20 | 5 | 5908 | 6120 | 22437652 | 22437880 | 2.960000e-43 | 187.0 |
24 | TraesCS6D01G048100 | chr6A | 88.889 | 108 | 9 | 3 | 3998 | 4102 | 22200986 | 22200879 | 5.060000e-26 | 130.0 |
25 | TraesCS6D01G048100 | chr6A | 77.720 | 193 | 22 | 14 | 5999 | 6176 | 21757468 | 21757282 | 1.430000e-16 | 99.0 |
26 | TraesCS6D01G048100 | chr6A | 92.308 | 39 | 3 | 0 | 5818 | 5856 | 22179660 | 22179698 | 8.700000e-04 | 56.5 |
27 | TraesCS6D01G048100 | chr6A | 100.000 | 28 | 0 | 0 | 5829 | 5856 | 22177786 | 22177813 | 1.100000e-02 | 52.8 |
28 | TraesCS6D01G048100 | chr6B | 85.170 | 1234 | 141 | 27 | 3996 | 5205 | 46661951 | 46663166 | 0.000000e+00 | 1227.0 |
29 | TraesCS6D01G048100 | chr6B | 86.758 | 1095 | 130 | 12 | 4118 | 5211 | 37644831 | 37643751 | 0.000000e+00 | 1205.0 |
30 | TraesCS6D01G048100 | chr6B | 86.739 | 1101 | 122 | 12 | 4118 | 5208 | 37035621 | 37036707 | 0.000000e+00 | 1203.0 |
31 | TraesCS6D01G048100 | chr6B | 87.392 | 928 | 60 | 18 | 1714 | 2600 | 54657776 | 54656865 | 0.000000e+00 | 1013.0 |
32 | TraesCS6D01G048100 | chr6B | 93.200 | 250 | 14 | 1 | 1303 | 1552 | 54658027 | 54657781 | 1.270000e-96 | 364.0 |
33 | TraesCS6D01G048100 | chr6B | 79.907 | 214 | 29 | 10 | 5906 | 6116 | 38753994 | 38754196 | 1.810000e-30 | 145.0 |
34 | TraesCS6D01G048100 | chr6B | 92.079 | 101 | 8 | 0 | 4002 | 4102 | 38625755 | 38625655 | 6.490000e-30 | 143.0 |
35 | TraesCS6D01G048100 | chr6B | 91.753 | 97 | 8 | 0 | 3996 | 4092 | 37035472 | 37035568 | 1.090000e-27 | 135.0 |
36 | TraesCS6D01G048100 | chr6B | 90.099 | 101 | 10 | 0 | 3996 | 4096 | 37784602 | 37784502 | 1.410000e-26 | 132.0 |
37 | TraesCS6D01G048100 | chr6B | 87.719 | 114 | 12 | 1 | 3980 | 4093 | 46653942 | 46654053 | 1.410000e-26 | 132.0 |
38 | TraesCS6D01G048100 | chr6B | 90.291 | 103 | 6 | 4 | 792 | 893 | 54660561 | 54660462 | 1.410000e-26 | 132.0 |
39 | TraesCS6D01G048100 | chr6B | 90.722 | 97 | 9 | 0 | 3996 | 4092 | 38541449 | 38541353 | 5.060000e-26 | 130.0 |
40 | TraesCS6D01G048100 | chr6B | 94.444 | 36 | 2 | 0 | 5821 | 5856 | 37672036 | 37672071 | 8.700000e-04 | 56.5 |
41 | TraesCS6D01G048100 | chr1D | 79.855 | 551 | 76 | 13 | 179 | 694 | 18292905 | 18292355 | 2.740000e-98 | 370.0 |
42 | TraesCS6D01G048100 | chr1D | 96.753 | 154 | 5 | 0 | 1 | 154 | 190996685 | 190996838 | 2.220000e-64 | 257.0 |
43 | TraesCS6D01G048100 | chr1D | 84.884 | 172 | 21 | 3 | 360 | 526 | 18292809 | 18292638 | 1.070000e-37 | 169.0 |
44 | TraesCS6D01G048100 | chr1D | 84.314 | 153 | 22 | 2 | 3570 | 3720 | 481485468 | 481485316 | 1.400000e-31 | 148.0 |
45 | TraesCS6D01G048100 | chr1D | 90.000 | 90 | 6 | 2 | 444 | 530 | 18292809 | 18292720 | 5.090000e-21 | 113.0 |
46 | TraesCS6D01G048100 | chr2D | 78.352 | 522 | 81 | 13 | 1006 | 1505 | 637468952 | 637469463 | 6.050000e-80 | 309.0 |
47 | TraesCS6D01G048100 | chr2B | 78.311 | 521 | 83 | 13 | 1006 | 1505 | 794820542 | 794821053 | 6.050000e-80 | 309.0 |
48 | TraesCS6D01G048100 | chr2A | 77.055 | 523 | 80 | 20 | 1012 | 1514 | 762521237 | 762520735 | 1.330000e-66 | 265.0 |
49 | TraesCS6D01G048100 | chr2A | 79.495 | 317 | 46 | 11 | 1012 | 1323 | 762518151 | 762517849 | 2.270000e-49 | 207.0 |
50 | TraesCS6D01G048100 | chr7D | 96.203 | 158 | 6 | 0 | 1 | 158 | 354118511 | 354118668 | 6.180000e-65 | 259.0 |
51 | TraesCS6D01G048100 | chr7D | 81.323 | 257 | 44 | 3 | 277 | 530 | 563632550 | 563632295 | 8.170000e-49 | 206.0 |
52 | TraesCS6D01G048100 | chr7D | 84.706 | 170 | 21 | 3 | 362 | 526 | 563632551 | 563632382 | 1.390000e-36 | 165.0 |
53 | TraesCS6D01G048100 | chr5D | 95.679 | 162 | 6 | 1 | 1 | 161 | 17167581 | 17167420 | 6.180000e-65 | 259.0 |
54 | TraesCS6D01G048100 | chr5D | 96.154 | 156 | 6 | 0 | 1 | 156 | 536439570 | 536439415 | 8.000000e-64 | 255.0 |
55 | TraesCS6D01G048100 | chr3D | 96.753 | 154 | 5 | 0 | 1 | 154 | 97860934 | 97861087 | 2.220000e-64 | 257.0 |
56 | TraesCS6D01G048100 | chr3D | 77.876 | 452 | 66 | 16 | 277 | 694 | 528950215 | 528950666 | 3.720000e-62 | 250.0 |
57 | TraesCS6D01G048100 | chr3D | 84.971 | 173 | 21 | 3 | 359 | 526 | 528950211 | 528950383 | 2.980000e-38 | 171.0 |
58 | TraesCS6D01G048100 | chr3D | 89.773 | 88 | 6 | 2 | 443 | 527 | 528950211 | 528950298 | 6.590000e-20 | 110.0 |
59 | TraesCS6D01G048100 | chr4D | 95.000 | 160 | 8 | 0 | 3 | 162 | 134670396 | 134670237 | 1.030000e-62 | 252.0 |
60 | TraesCS6D01G048100 | chr4D | 92.045 | 176 | 12 | 2 | 1 | 176 | 175459313 | 175459486 | 4.810000e-61 | 246.0 |
61 | TraesCS6D01G048100 | chr1A | 86.897 | 145 | 19 | 0 | 3565 | 3709 | 578013516 | 578013660 | 4.990000e-36 | 163.0 |
62 | TraesCS6D01G048100 | chr3A | 78.281 | 221 | 26 | 13 | 6004 | 6207 | 99592215 | 99592000 | 8.460000e-24 | 122.0 |
63 | TraesCS6D01G048100 | chr5B | 77.500 | 160 | 28 | 7 | 179 | 336 | 636398609 | 636398762 | 8.580000e-14 | 89.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G048100 | chr6D | 22760512 | 22766726 | 6214 | True | 2759.250000 | 5637 | 92.812500 | 1 | 6215 | 4 | chr6D.!!$R4 | 6214 |
1 | TraesCS6D01G048100 | chr6D | 23630923 | 23632004 | 1081 | True | 1218.000000 | 1218 | 86.941000 | 4118 | 5211 | 1 | chr6D.!!$R1 | 1093 |
2 | TraesCS6D01G048100 | chr6D | 23397804 | 23399065 | 1261 | False | 748.500000 | 1386 | 86.124000 | 3731 | 5015 | 2 | chr6D.!!$F3 | 1284 |
3 | TraesCS6D01G048100 | chr6D | 23640964 | 23642187 | 1223 | True | 702.500000 | 1275 | 90.086500 | 4012 | 5211 | 2 | chr6D.!!$R5 | 1199 |
4 | TraesCS6D01G048100 | chrUn | 80168374 | 80172232 | 3858 | False | 1432.250000 | 2961 | 92.658000 | 494 | 6215 | 4 | chrUn.!!$F2 | 5721 |
5 | TraesCS6D01G048100 | chr6A | 22171615 | 22173042 | 1427 | False | 1755.000000 | 1755 | 89.057000 | 3782 | 5208 | 1 | chr6A.!!$F1 | 1426 |
6 | TraesCS6D01G048100 | chr6A | 22192235 | 22193318 | 1083 | True | 1238.000000 | 1238 | 87.238000 | 4116 | 5211 | 1 | chr6A.!!$R2 | 1095 |
7 | TraesCS6D01G048100 | chr6A | 22199746 | 22200986 | 1240 | True | 688.500000 | 1247 | 88.154500 | 3998 | 5211 | 2 | chr6A.!!$R4 | 1213 |
8 | TraesCS6D01G048100 | chr6A | 22350974 | 22351505 | 531 | True | 475.000000 | 475 | 82.944000 | 4657 | 5209 | 1 | chr6A.!!$R3 | 552 |
9 | TraesCS6D01G048100 | chr6A | 22437652 | 22439570 | 1918 | False | 277.500000 | 368 | 83.900500 | 5830 | 6198 | 2 | chr6A.!!$F3 | 368 |
10 | TraesCS6D01G048100 | chr6B | 46661951 | 46663166 | 1215 | False | 1227.000000 | 1227 | 85.170000 | 3996 | 5205 | 1 | chr6B.!!$F4 | 1209 |
11 | TraesCS6D01G048100 | chr6B | 37643751 | 37644831 | 1080 | True | 1205.000000 | 1205 | 86.758000 | 4118 | 5211 | 1 | chr6B.!!$R1 | 1093 |
12 | TraesCS6D01G048100 | chr6B | 37035472 | 37036707 | 1235 | False | 669.000000 | 1203 | 89.246000 | 3996 | 5208 | 2 | chr6B.!!$F5 | 1212 |
13 | TraesCS6D01G048100 | chr6B | 54656865 | 54660561 | 3696 | True | 503.000000 | 1013 | 90.294333 | 792 | 2600 | 3 | chr6B.!!$R5 | 1808 |
14 | TraesCS6D01G048100 | chr1D | 18292355 | 18292905 | 550 | True | 217.333333 | 370 | 84.913000 | 179 | 694 | 3 | chr1D.!!$R2 | 515 |
15 | TraesCS6D01G048100 | chr2D | 637468952 | 637469463 | 511 | False | 309.000000 | 309 | 78.352000 | 1006 | 1505 | 1 | chr2D.!!$F1 | 499 |
16 | TraesCS6D01G048100 | chr2B | 794820542 | 794821053 | 511 | False | 309.000000 | 309 | 78.311000 | 1006 | 1505 | 1 | chr2B.!!$F1 | 499 |
17 | TraesCS6D01G048100 | chr2A | 762517849 | 762521237 | 3388 | True | 236.000000 | 265 | 78.275000 | 1012 | 1514 | 2 | chr2A.!!$R1 | 502 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
405 | 407 | 0.110056 | CAACAAGTCATGCTGCGACC | 60.110 | 55.000 | 4.39 | 0.0 | 33.70 | 4.79 | F |
672 | 675 | 0.165944 | GTCAGCGGGACAATCAAACG | 59.834 | 55.000 | 6.68 | 0.0 | 46.19 | 3.60 | F |
691 | 694 | 0.321653 | GGCTGTCAACCCGACTGATT | 60.322 | 55.000 | 3.62 | 0.0 | 45.60 | 2.57 | F |
1801 | 3866 | 0.667184 | GCAACCAATTCAACCCTGCG | 60.667 | 55.000 | 0.00 | 0.0 | 0.00 | 5.18 | F |
2423 | 4527 | 1.545582 | GATAGGAGCAGCTAGGAGCAG | 59.454 | 57.143 | 0.00 | 0.0 | 45.56 | 4.24 | F |
4005 | 7033 | 0.610785 | ACGGCAAACCCATTCCGATT | 60.611 | 50.000 | 6.52 | 0.0 | 44.23 | 3.34 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1623 | 3683 | 1.006220 | CGTGTGTAGGCTGTGCTCA | 60.006 | 57.895 | 0.00 | 0.0 | 0.00 | 4.26 | R |
2503 | 4636 | 0.253610 | AAGTTGGACGGGTGACACAA | 59.746 | 50.000 | 8.08 | 0.0 | 0.00 | 3.33 | R |
2684 | 5093 | 3.462483 | TTGGAAAAGCACTGTACGAGA | 57.538 | 42.857 | 0.00 | 0.0 | 0.00 | 4.04 | R |
3354 | 6361 | 1.550524 | TGCGCTAAGAAGTGATCACCT | 59.449 | 47.619 | 22.21 | 9.8 | 35.06 | 4.00 | R |
4027 | 7055 | 0.036875 | AACAGGGCCAAGCAGAGTAC | 59.963 | 55.000 | 6.18 | 0.0 | 0.00 | 2.73 | R |
5666 | 8828 | 0.323178 | ATGGGAGCTCTGCACCTTTG | 60.323 | 55.000 | 14.64 | 0.0 | 39.22 | 2.77 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
33 | 34 | 6.707290 | TGATGACATGATATGAGATGCATGA | 58.293 | 36.000 | 2.46 | 0.00 | 40.29 | 3.07 |
34 | 35 | 6.594159 | TGATGACATGATATGAGATGCATGAC | 59.406 | 38.462 | 2.46 | 0.00 | 40.29 | 3.06 |
35 | 36 | 5.860611 | TGACATGATATGAGATGCATGACA | 58.139 | 37.500 | 2.46 | 4.19 | 40.29 | 3.58 |
36 | 37 | 6.472887 | TGACATGATATGAGATGCATGACAT | 58.527 | 36.000 | 2.46 | 11.89 | 43.54 | 3.06 |
37 | 38 | 6.371548 | TGACATGATATGAGATGCATGACATG | 59.628 | 38.462 | 19.21 | 11.27 | 45.76 | 3.21 |
39 | 40 | 6.940298 | ACATGATATGAGATGCATGACATGAA | 59.060 | 34.615 | 19.76 | 9.39 | 44.65 | 2.57 |
40 | 41 | 6.796705 | TGATATGAGATGCATGACATGAAC | 57.203 | 37.500 | 19.76 | 8.86 | 39.84 | 3.18 |
44 | 45 | 5.708877 | TGAGATGCATGACATGAACAAAA | 57.291 | 34.783 | 19.76 | 0.00 | 39.84 | 2.44 |
45 | 46 | 6.275494 | TGAGATGCATGACATGAACAAAAT | 57.725 | 33.333 | 19.76 | 2.33 | 39.84 | 1.82 |
46 | 47 | 6.096695 | TGAGATGCATGACATGAACAAAATG | 58.903 | 36.000 | 19.76 | 0.00 | 39.84 | 2.32 |
47 | 48 | 4.868171 | AGATGCATGACATGAACAAAATGC | 59.132 | 37.500 | 19.76 | 7.16 | 39.84 | 3.56 |
50 | 51 | 4.814771 | TGCATGACATGAACAAAATGCAAA | 59.185 | 33.333 | 19.76 | 2.32 | 45.25 | 3.68 |
51 | 52 | 5.296035 | TGCATGACATGAACAAAATGCAAAA | 59.704 | 32.000 | 19.76 | 1.85 | 45.25 | 2.44 |
54 | 55 | 6.732531 | TGACATGAACAAAATGCAAAACAA | 57.267 | 29.167 | 0.00 | 0.00 | 0.00 | 2.83 |
55 | 56 | 7.137490 | TGACATGAACAAAATGCAAAACAAA | 57.863 | 28.000 | 0.00 | 0.00 | 0.00 | 2.83 |
56 | 57 | 7.587629 | TGACATGAACAAAATGCAAAACAAAA | 58.412 | 26.923 | 0.00 | 0.00 | 0.00 | 2.44 |
57 | 58 | 7.749570 | TGACATGAACAAAATGCAAAACAAAAG | 59.250 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
58 | 59 | 7.814642 | ACATGAACAAAATGCAAAACAAAAGA | 58.185 | 26.923 | 0.00 | 0.00 | 0.00 | 2.52 |
59 | 60 | 7.750014 | ACATGAACAAAATGCAAAACAAAAGAC | 59.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
60 | 61 | 7.194607 | TGAACAAAATGCAAAACAAAAGACA | 57.805 | 28.000 | 0.00 | 0.00 | 0.00 | 3.41 |
62 | 63 | 8.131100 | TGAACAAAATGCAAAACAAAAGACAAA | 58.869 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
64 | 65 | 9.473640 | AACAAAATGCAAAACAAAAGACAAAAT | 57.526 | 22.222 | 0.00 | 0.00 | 0.00 | 1.82 |
65 | 66 | 9.127006 | ACAAAATGCAAAACAAAAGACAAAATC | 57.873 | 25.926 | 0.00 | 0.00 | 0.00 | 2.17 |
67 | 68 | 5.462034 | TGCAAAACAAAAGACAAAATCCG | 57.538 | 34.783 | 0.00 | 0.00 | 0.00 | 4.18 |
69 | 70 | 5.062809 | TGCAAAACAAAAGACAAAATCCGAC | 59.937 | 36.000 | 0.00 | 0.00 | 0.00 | 4.79 |
70 | 71 | 5.501736 | GCAAAACAAAAGACAAAATCCGACC | 60.502 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
71 | 72 | 4.993029 | AACAAAAGACAAAATCCGACCA | 57.007 | 36.364 | 0.00 | 0.00 | 0.00 | 4.02 |
72 | 73 | 5.529581 | AACAAAAGACAAAATCCGACCAT | 57.470 | 34.783 | 0.00 | 0.00 | 0.00 | 3.55 |
73 | 74 | 4.870363 | ACAAAAGACAAAATCCGACCATG | 58.130 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
75 | 76 | 5.068460 | ACAAAAGACAAAATCCGACCATGAA | 59.932 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
76 | 77 | 5.782893 | AAAGACAAAATCCGACCATGAAA | 57.217 | 34.783 | 0.00 | 0.00 | 0.00 | 2.69 |
77 | 78 | 5.376854 | AAGACAAAATCCGACCATGAAAG | 57.623 | 39.130 | 0.00 | 0.00 | 0.00 | 2.62 |
78 | 79 | 3.758554 | AGACAAAATCCGACCATGAAAGG | 59.241 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
79 | 80 | 3.756434 | GACAAAATCCGACCATGAAAGGA | 59.244 | 43.478 | 0.00 | 0.00 | 37.17 | 3.36 |
80 | 81 | 4.148838 | ACAAAATCCGACCATGAAAGGAA | 58.851 | 39.130 | 0.00 | 0.00 | 36.25 | 3.36 |
82 | 83 | 5.949354 | ACAAAATCCGACCATGAAAGGAATA | 59.051 | 36.000 | 0.00 | 0.00 | 36.25 | 1.75 |
83 | 84 | 6.607198 | ACAAAATCCGACCATGAAAGGAATAT | 59.393 | 34.615 | 0.00 | 0.00 | 36.25 | 1.28 |
84 | 85 | 6.884280 | AAATCCGACCATGAAAGGAATATC | 57.116 | 37.500 | 0.00 | 0.00 | 36.25 | 1.63 |
85 | 86 | 5.567037 | ATCCGACCATGAAAGGAATATCA | 57.433 | 39.130 | 0.00 | 0.00 | 36.25 | 2.15 |
86 | 87 | 5.567037 | TCCGACCATGAAAGGAATATCAT | 57.433 | 39.130 | 0.00 | 0.00 | 36.74 | 2.45 |
88 | 89 | 7.073457 | TCCGACCATGAAAGGAATATCATAA | 57.927 | 36.000 | 0.00 | 0.00 | 34.61 | 1.90 |
89 | 90 | 6.934645 | TCCGACCATGAAAGGAATATCATAAC | 59.065 | 38.462 | 0.00 | 0.00 | 34.61 | 1.89 |
90 | 91 | 6.710295 | CCGACCATGAAAGGAATATCATAACA | 59.290 | 38.462 | 0.00 | 0.00 | 34.61 | 2.41 |
99 | 100 | 9.268268 | GAAAGGAATATCATAACACATAACCGA | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
101 | 102 | 9.621629 | AAGGAATATCATAACACATAACCGAAA | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 3.46 |
102 | 103 | 9.621629 | AGGAATATCATAACACATAACCGAAAA | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
106 | 107 | 5.885881 | TCATAACACATAACCGAAAATGGC | 58.114 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
108 | 109 | 4.592485 | AACACATAACCGAAAATGGCAA | 57.408 | 36.364 | 0.00 | 0.00 | 0.00 | 4.52 |
110 | 111 | 3.823873 | ACACATAACCGAAAATGGCAAGA | 59.176 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
111 | 112 | 4.082787 | ACACATAACCGAAAATGGCAAGAG | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
112 | 113 | 4.079253 | ACATAACCGAAAATGGCAAGAGT | 58.921 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
113 | 114 | 4.522789 | ACATAACCGAAAATGGCAAGAGTT | 59.477 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
115 | 116 | 1.613437 | ACCGAAAATGGCAAGAGTTGG | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
116 | 117 | 1.885887 | CCGAAAATGGCAAGAGTTGGA | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
117 | 118 | 2.095059 | CCGAAAATGGCAAGAGTTGGAG | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
119 | 120 | 3.004734 | CGAAAATGGCAAGAGTTGGAGTT | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
120 | 121 | 4.215399 | CGAAAATGGCAAGAGTTGGAGTTA | 59.785 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
121 | 122 | 5.453567 | AAAATGGCAAGAGTTGGAGTTAC | 57.546 | 39.130 | 0.00 | 0.00 | 0.00 | 2.50 |
122 | 123 | 3.788227 | ATGGCAAGAGTTGGAGTTACA | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
124 | 125 | 3.892284 | TGGCAAGAGTTGGAGTTACAAA | 58.108 | 40.909 | 0.00 | 0.00 | 31.17 | 2.83 |
126 | 127 | 5.626142 | TGGCAAGAGTTGGAGTTACAAATA | 58.374 | 37.500 | 0.00 | 0.00 | 31.17 | 1.40 |
127 | 128 | 6.245408 | TGGCAAGAGTTGGAGTTACAAATAT | 58.755 | 36.000 | 0.00 | 0.00 | 31.17 | 1.28 |
129 | 130 | 6.374333 | GGCAAGAGTTGGAGTTACAAATATGA | 59.626 | 38.462 | 0.00 | 0.00 | 31.17 | 2.15 |
131 | 132 | 8.296713 | GCAAGAGTTGGAGTTACAAATATGAAA | 58.703 | 33.333 | 0.00 | 0.00 | 31.17 | 2.69 |
144 | 145 | 7.095695 | ACAAATATGAAAAGTTACATCCGGG | 57.904 | 36.000 | 0.00 | 0.00 | 0.00 | 5.73 |
145 | 146 | 6.096282 | ACAAATATGAAAAGTTACATCCGGGG | 59.904 | 38.462 | 0.00 | 0.00 | 0.00 | 5.73 |
146 | 147 | 3.732048 | ATGAAAAGTTACATCCGGGGT | 57.268 | 42.857 | 0.00 | 2.79 | 0.00 | 4.95 |
147 | 148 | 2.785562 | TGAAAAGTTACATCCGGGGTG | 58.214 | 47.619 | 5.55 | 5.55 | 0.00 | 4.61 |
148 | 149 | 2.106857 | TGAAAAGTTACATCCGGGGTGT | 59.893 | 45.455 | 18.45 | 18.45 | 0.00 | 4.16 |
149 | 150 | 2.963599 | AAAGTTACATCCGGGGTGTT | 57.036 | 45.000 | 19.71 | 0.00 | 0.00 | 3.32 |
150 | 151 | 4.202440 | TGAAAAGTTACATCCGGGGTGTTA | 60.202 | 41.667 | 19.71 | 6.65 | 0.00 | 2.41 |
152 | 153 | 2.259012 | AGTTACATCCGGGGTGTTACA | 58.741 | 47.619 | 26.16 | 4.90 | 33.02 | 2.41 |
153 | 154 | 2.235402 | AGTTACATCCGGGGTGTTACAG | 59.765 | 50.000 | 26.16 | 0.00 | 33.02 | 2.74 |
155 | 156 | 1.354101 | ACATCCGGGGTGTTACAGAA | 58.646 | 50.000 | 7.23 | 0.00 | 0.00 | 3.02 |
156 | 157 | 1.002773 | ACATCCGGGGTGTTACAGAAC | 59.997 | 52.381 | 7.23 | 0.00 | 36.00 | 3.01 |
157 | 158 | 0.616891 | ATCCGGGGTGTTACAGAACC | 59.383 | 55.000 | 0.00 | 0.00 | 34.38 | 3.62 |
158 | 159 | 1.375013 | CCGGGGTGTTACAGAACCG | 60.375 | 63.158 | 13.11 | 13.11 | 40.89 | 4.44 |
159 | 160 | 2.030958 | CGGGGTGTTACAGAACCGC | 61.031 | 63.158 | 8.84 | 3.95 | 43.90 | 5.68 |
160 | 161 | 1.071814 | GGGGTGTTACAGAACCGCA | 59.928 | 57.895 | 4.22 | 0.00 | 45.97 | 5.69 |
161 | 162 | 0.953960 | GGGGTGTTACAGAACCGCAG | 60.954 | 60.000 | 4.22 | 0.00 | 45.97 | 5.18 |
163 | 164 | 0.882927 | GGTGTTACAGAACCGCAGCA | 60.883 | 55.000 | 0.00 | 0.00 | 34.38 | 4.41 |
165 | 166 | 1.218875 | TGTTACAGAACCGCAGCACG | 61.219 | 55.000 | 0.00 | 0.00 | 43.15 | 5.34 |
198 | 200 | 3.248029 | CGGAGCTGCAGTCAACAC | 58.752 | 61.111 | 16.64 | 0.00 | 0.00 | 3.32 |
199 | 201 | 1.595109 | CGGAGCTGCAGTCAACACA | 60.595 | 57.895 | 16.64 | 0.00 | 0.00 | 3.72 |
226 | 228 | 3.931190 | TACTCGCTGGCGGACCTCA | 62.931 | 63.158 | 14.94 | 0.00 | 40.25 | 3.86 |
261 | 263 | 1.311859 | CAGTGCAGTGTTCATGGTGT | 58.688 | 50.000 | 13.67 | 0.00 | 0.00 | 4.16 |
264 | 266 | 1.405105 | GTGCAGTGTTCATGGTGTTGT | 59.595 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
266 | 268 | 1.675483 | GCAGTGTTCATGGTGTTGTGA | 59.325 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
299 | 301 | 2.202797 | CACGCGGCAGAGCTACAT | 60.203 | 61.111 | 12.47 | 0.00 | 34.40 | 2.29 |
304 | 306 | 1.647545 | GCGGCAGAGCTACATTGCAA | 61.648 | 55.000 | 0.00 | 0.00 | 39.54 | 4.08 |
306 | 308 | 1.167851 | GGCAGAGCTACATTGCAACA | 58.832 | 50.000 | 0.00 | 0.00 | 39.54 | 3.33 |
308 | 310 | 1.536766 | GCAGAGCTACATTGCAACACA | 59.463 | 47.619 | 0.00 | 0.00 | 37.75 | 3.72 |
335 | 337 | 1.447838 | CGACCAATGGACCTCACCG | 60.448 | 63.158 | 6.16 | 0.00 | 0.00 | 4.94 |
352 | 354 | 3.760917 | GGCGACGGGAGCTATAGT | 58.239 | 61.111 | 0.84 | 0.00 | 34.52 | 2.12 |
353 | 355 | 1.286260 | GGCGACGGGAGCTATAGTG | 59.714 | 63.158 | 0.84 | 0.00 | 34.52 | 2.74 |
354 | 356 | 1.286260 | GCGACGGGAGCTATAGTGG | 59.714 | 63.158 | 0.84 | 0.00 | 0.00 | 4.00 |
355 | 357 | 1.170919 | GCGACGGGAGCTATAGTGGA | 61.171 | 60.000 | 0.84 | 0.00 | 0.00 | 4.02 |
356 | 358 | 0.875728 | CGACGGGAGCTATAGTGGAG | 59.124 | 60.000 | 0.84 | 0.00 | 0.00 | 3.86 |
357 | 359 | 0.599060 | GACGGGAGCTATAGTGGAGC | 59.401 | 60.000 | 0.84 | 0.00 | 40.42 | 4.70 |
358 | 360 | 1.173444 | ACGGGAGCTATAGTGGAGCG | 61.173 | 60.000 | 0.84 | 0.00 | 44.98 | 5.03 |
359 | 361 | 1.290639 | GGGAGCTATAGTGGAGCGC | 59.709 | 63.158 | 0.00 | 0.00 | 44.98 | 5.92 |
360 | 362 | 1.464376 | GGGAGCTATAGTGGAGCGCA | 61.464 | 60.000 | 11.47 | 0.00 | 44.98 | 6.09 |
361 | 363 | 0.605589 | GGAGCTATAGTGGAGCGCAT | 59.394 | 55.000 | 11.47 | 0.00 | 44.98 | 4.73 |
362 | 364 | 1.403514 | GGAGCTATAGTGGAGCGCATC | 60.404 | 57.143 | 11.47 | 4.01 | 44.98 | 3.91 |
363 | 365 | 0.242286 | AGCTATAGTGGAGCGCATCG | 59.758 | 55.000 | 11.47 | 0.00 | 44.98 | 3.84 |
390 | 392 | 2.956194 | CGGAGCTGCATTGCAACA | 59.044 | 55.556 | 13.18 | 0.00 | 38.41 | 3.33 |
391 | 393 | 1.286570 | CGGAGCTGCATTGCAACAA | 59.713 | 52.632 | 13.18 | 0.00 | 38.41 | 2.83 |
392 | 394 | 0.731514 | CGGAGCTGCATTGCAACAAG | 60.732 | 55.000 | 13.18 | 0.36 | 38.41 | 3.16 |
393 | 395 | 0.316204 | GGAGCTGCATTGCAACAAGT | 59.684 | 50.000 | 13.18 | 0.00 | 38.41 | 3.16 |
394 | 396 | 1.668047 | GGAGCTGCATTGCAACAAGTC | 60.668 | 52.381 | 13.18 | 2.31 | 38.41 | 3.01 |
395 | 397 | 1.001048 | GAGCTGCATTGCAACAAGTCA | 60.001 | 47.619 | 13.18 | 0.00 | 38.41 | 3.41 |
396 | 398 | 1.616865 | AGCTGCATTGCAACAAGTCAT | 59.383 | 42.857 | 13.18 | 0.00 | 38.41 | 3.06 |
397 | 399 | 1.724623 | GCTGCATTGCAACAAGTCATG | 59.275 | 47.619 | 13.18 | 0.00 | 38.41 | 3.07 |
398 | 400 | 1.724623 | CTGCATTGCAACAAGTCATGC | 59.275 | 47.619 | 13.18 | 6.64 | 38.41 | 4.06 |
399 | 401 | 1.341852 | TGCATTGCAACAAGTCATGCT | 59.658 | 42.857 | 17.13 | 0.00 | 42.97 | 3.79 |
400 | 402 | 1.724623 | GCATTGCAACAAGTCATGCTG | 59.275 | 47.619 | 0.00 | 0.00 | 42.97 | 4.41 |
402 | 404 | 4.141883 | GCAACAAGTCATGCTGCG | 57.858 | 55.556 | 0.00 | 0.00 | 40.94 | 5.18 |
403 | 405 | 1.575922 | GCAACAAGTCATGCTGCGA | 59.424 | 52.632 | 0.00 | 0.00 | 40.94 | 5.10 |
404 | 406 | 0.727122 | GCAACAAGTCATGCTGCGAC | 60.727 | 55.000 | 0.00 | 0.00 | 40.94 | 5.19 |
405 | 407 | 0.110056 | CAACAAGTCATGCTGCGACC | 60.110 | 55.000 | 4.39 | 0.00 | 33.70 | 4.79 |
406 | 408 | 1.568612 | AACAAGTCATGCTGCGACCG | 61.569 | 55.000 | 4.39 | 0.20 | 33.70 | 4.79 |
407 | 409 | 2.434884 | AAGTCATGCTGCGACCGG | 60.435 | 61.111 | 0.00 | 0.00 | 33.70 | 5.28 |
408 | 410 | 3.240134 | AAGTCATGCTGCGACCGGT | 62.240 | 57.895 | 6.92 | 6.92 | 33.70 | 5.28 |
409 | 411 | 3.490759 | GTCATGCTGCGACCGGTG | 61.491 | 66.667 | 14.63 | 5.62 | 0.00 | 4.94 |
410 | 412 | 4.758251 | TCATGCTGCGACCGGTGG | 62.758 | 66.667 | 14.63 | 13.66 | 0.00 | 4.61 |
411 | 413 | 4.758251 | CATGCTGCGACCGGTGGA | 62.758 | 66.667 | 21.99 | 9.35 | 0.00 | 4.02 |
412 | 414 | 4.760047 | ATGCTGCGACCGGTGGAC | 62.760 | 66.667 | 21.99 | 12.08 | 0.00 | 4.02 |
415 | 417 | 4.436998 | CTGCGACCGGTGGACCTC | 62.437 | 72.222 | 21.99 | 2.70 | 0.00 | 3.85 |
417 | 419 | 4.736896 | GCGACCGGTGGACCTCAC | 62.737 | 72.222 | 21.99 | 0.00 | 45.34 | 3.51 |
439 | 441 | 4.648626 | GGTGGGAGCTGCAGTGCA | 62.649 | 66.667 | 18.58 | 18.58 | 36.92 | 4.57 |
471 | 473 | 4.994471 | CGGTGGAGCTGCAGTGCA | 62.994 | 66.667 | 18.58 | 18.58 | 36.92 | 4.57 |
472 | 474 | 2.595463 | GGTGGAGCTGCAGTGCAA | 60.595 | 61.111 | 20.22 | 0.00 | 38.41 | 4.08 |
473 | 475 | 2.641559 | GTGGAGCTGCAGTGCAAC | 59.358 | 61.111 | 20.22 | 15.35 | 38.41 | 4.17 |
474 | 476 | 2.974148 | TGGAGCTGCAGTGCAACG | 60.974 | 61.111 | 20.22 | 9.72 | 45.86 | 4.10 |
475 | 477 | 4.395583 | GGAGCTGCAGTGCAACGC | 62.396 | 66.667 | 20.22 | 19.46 | 45.86 | 4.84 |
476 | 478 | 4.731503 | GAGCTGCAGTGCAACGCG | 62.732 | 66.667 | 20.22 | 3.53 | 45.86 | 6.01 |
479 | 481 | 4.707840 | CTGCAGTGCAACGCGTCG | 62.708 | 66.667 | 20.22 | 0.56 | 45.86 | 5.12 |
481 | 483 | 4.993945 | GCAGTGCAACGCGTCGTG | 62.994 | 66.667 | 14.44 | 9.85 | 45.86 | 4.35 |
482 | 484 | 4.993945 | CAGTGCAACGCGTCGTGC | 62.994 | 66.667 | 25.08 | 25.08 | 45.86 | 5.34 |
484 | 486 | 4.993945 | GTGCAACGCGTCGTGCTG | 62.994 | 66.667 | 29.68 | 18.43 | 39.99 | 4.41 |
544 | 546 | 4.155733 | TACAGCGGCGATGGTGGG | 62.156 | 66.667 | 29.60 | 3.68 | 41.54 | 4.61 |
555 | 557 | 0.839946 | GATGGTGGGTGCTATGACCT | 59.160 | 55.000 | 0.00 | 0.00 | 36.14 | 3.85 |
558 | 560 | 1.815421 | GTGGGTGCTATGACCTGCG | 60.815 | 63.158 | 0.00 | 0.00 | 36.14 | 5.18 |
561 | 563 | 2.731571 | GGTGCTATGACCTGCGGGA | 61.732 | 63.158 | 21.41 | 0.00 | 36.25 | 5.14 |
593 | 595 | 4.379243 | CGACGGCTGCTGGAAGGT | 62.379 | 66.667 | 13.87 | 0.00 | 0.00 | 3.50 |
597 | 599 | 2.743928 | GGCTGCTGGAAGGTGACG | 60.744 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
603 | 605 | 0.320421 | GCTGGAAGGTGACGTTGCTA | 60.320 | 55.000 | 10.65 | 0.00 | 0.00 | 3.49 |
624 | 627 | 1.446272 | GAGAAACGCGGGGACAGAG | 60.446 | 63.158 | 12.47 | 0.00 | 0.00 | 3.35 |
626 | 629 | 1.005394 | GAAACGCGGGGACAGAGAA | 60.005 | 57.895 | 12.47 | 0.00 | 0.00 | 2.87 |
637 | 640 | 1.671901 | GACAGAGAAGCTCGGAGGGG | 61.672 | 65.000 | 7.20 | 0.00 | 35.36 | 4.79 |
659 | 662 | 4.175489 | ATCCGACGTCCGTCAGCG | 62.175 | 66.667 | 18.69 | 6.54 | 44.77 | 5.18 |
672 | 675 | 0.165944 | GTCAGCGGGACAATCAAACG | 59.834 | 55.000 | 6.68 | 0.00 | 46.19 | 3.60 |
689 | 692 | 2.741092 | GGCTGTCAACCCGACTGA | 59.259 | 61.111 | 3.62 | 0.00 | 45.60 | 3.41 |
690 | 693 | 1.296715 | GGCTGTCAACCCGACTGAT | 59.703 | 57.895 | 3.62 | 0.00 | 45.60 | 2.90 |
691 | 694 | 0.321653 | GGCTGTCAACCCGACTGATT | 60.322 | 55.000 | 3.62 | 0.00 | 45.60 | 2.57 |
692 | 695 | 1.523758 | GCTGTCAACCCGACTGATTT | 58.476 | 50.000 | 3.62 | 0.00 | 45.60 | 2.17 |
694 | 697 | 2.350772 | GCTGTCAACCCGACTGATTTTG | 60.351 | 50.000 | 3.62 | 0.00 | 45.60 | 2.44 |
695 | 698 | 2.878406 | CTGTCAACCCGACTGATTTTGT | 59.122 | 45.455 | 0.00 | 0.00 | 45.60 | 2.83 |
697 | 700 | 2.031157 | GTCAACCCGACTGATTTTGTGG | 60.031 | 50.000 | 0.00 | 0.00 | 41.81 | 4.17 |
698 | 701 | 0.958822 | AACCCGACTGATTTTGTGGC | 59.041 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
699 | 702 | 0.893727 | ACCCGACTGATTTTGTGGCC | 60.894 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
700 | 703 | 1.595093 | CCCGACTGATTTTGTGGCCC | 61.595 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
703 | 706 | 1.200020 | CGACTGATTTTGTGGCCCTTC | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
704 | 707 | 2.238521 | GACTGATTTTGTGGCCCTTCA | 58.761 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
705 | 708 | 2.627699 | GACTGATTTTGTGGCCCTTCAA | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
815 | 830 | 3.284449 | GGCGCCAAGAAACACCGT | 61.284 | 61.111 | 24.80 | 0.00 | 0.00 | 4.83 |
980 | 1048 | 5.240623 | GGTACATTGGTCACACAAGAATCAA | 59.759 | 40.000 | 0.00 | 0.00 | 33.23 | 2.57 |
983 | 1051 | 3.855255 | TGGTCACACAAGAATCAAGGA | 57.145 | 42.857 | 0.00 | 0.00 | 0.00 | 3.36 |
984 | 1052 | 4.163441 | TGGTCACACAAGAATCAAGGAA | 57.837 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
985 | 1053 | 4.531854 | TGGTCACACAAGAATCAAGGAAA | 58.468 | 39.130 | 0.00 | 0.00 | 0.00 | 3.13 |
986 | 1054 | 5.139727 | TGGTCACACAAGAATCAAGGAAAT | 58.860 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
987 | 1055 | 5.241506 | TGGTCACACAAGAATCAAGGAAATC | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
988 | 1056 | 5.474876 | GGTCACACAAGAATCAAGGAAATCT | 59.525 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
989 | 1057 | 6.015940 | GGTCACACAAGAATCAAGGAAATCTT | 60.016 | 38.462 | 0.00 | 0.00 | 35.79 | 2.40 |
1003 | 1071 | 2.653234 | AATCTTCCAGCTAGCCATGG | 57.347 | 50.000 | 15.30 | 15.30 | 37.97 | 3.66 |
1056 | 1124 | 1.489481 | TCGTGGCTGATGAGATCCTT | 58.511 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1158 | 1376 | 4.379243 | CTGCGCCACCTCCGTCTT | 62.379 | 66.667 | 4.18 | 0.00 | 0.00 | 3.01 |
1184 | 1547 | 1.078848 | CAGGCCTGGAACTTCCTCG | 60.079 | 63.158 | 26.14 | 0.00 | 37.46 | 4.63 |
1207 | 1686 | 2.699954 | CCACTTGCCTCTACGACAAAT | 58.300 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
1506 | 3566 | 3.027412 | GGTCTACAAGGCTCTCATCTCA | 58.973 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1623 | 3683 | 3.126001 | TGCGACAAGGAGATTTTCAGT | 57.874 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
1667 | 3727 | 6.457257 | GCGGACAACAAAGTGTACTTTCTTAA | 60.457 | 38.462 | 7.02 | 0.00 | 43.72 | 1.85 |
1689 | 3749 | 4.913335 | ATACACATCGTACTTCACCGAT | 57.087 | 40.909 | 0.00 | 0.00 | 44.07 | 4.18 |
1801 | 3866 | 0.667184 | GCAACCAATTCAACCCTGCG | 60.667 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2252 | 4323 | 1.551883 | GCCCAAGCATGAGTTGGATTT | 59.448 | 47.619 | 22.68 | 0.00 | 46.53 | 2.17 |
2272 | 4343 | 2.722094 | TGATTTTCCTGGAATGGACGG | 58.278 | 47.619 | 10.45 | 0.00 | 35.58 | 4.79 |
2313 | 4384 | 1.935873 | GCGATGCAAATGCTCTCTACA | 59.064 | 47.619 | 6.97 | 0.00 | 42.66 | 2.74 |
2315 | 4386 | 3.545624 | GCGATGCAAATGCTCTCTACAAG | 60.546 | 47.826 | 6.97 | 0.00 | 42.66 | 3.16 |
2316 | 4387 | 3.620374 | CGATGCAAATGCTCTCTACAAGT | 59.380 | 43.478 | 6.97 | 0.00 | 42.66 | 3.16 |
2317 | 4388 | 4.260132 | CGATGCAAATGCTCTCTACAAGTC | 60.260 | 45.833 | 6.97 | 0.00 | 42.66 | 3.01 |
2319 | 4390 | 4.388485 | TGCAAATGCTCTCTACAAGTCAA | 58.612 | 39.130 | 6.97 | 0.00 | 42.66 | 3.18 |
2320 | 4391 | 4.214119 | TGCAAATGCTCTCTACAAGTCAAC | 59.786 | 41.667 | 6.97 | 0.00 | 42.66 | 3.18 |
2423 | 4527 | 1.545582 | GATAGGAGCAGCTAGGAGCAG | 59.454 | 57.143 | 0.00 | 0.00 | 45.56 | 4.24 |
2503 | 4636 | 3.267551 | TGGATATACCATGCATGCCTCAT | 59.732 | 43.478 | 21.69 | 10.97 | 44.64 | 2.90 |
2640 | 5049 | 6.054941 | ACTGTGCGTCAATTAATATGGATCA | 58.945 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2658 | 5067 | 6.962182 | TGGATCAGAAGGAGTATGTCATTTT | 58.038 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2659 | 5068 | 7.050377 | TGGATCAGAAGGAGTATGTCATTTTC | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2660 | 5069 | 7.050377 | GGATCAGAAGGAGTATGTCATTTTCA | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
2675 | 5084 | 6.855914 | TGTCATTTTCATCTAACAACTTTCGC | 59.144 | 34.615 | 0.00 | 0.00 | 0.00 | 4.70 |
2684 | 5093 | 6.385649 | TCTAACAACTTTCGCTGGAAATTT | 57.614 | 33.333 | 0.00 | 0.00 | 41.12 | 1.82 |
2685 | 5094 | 6.435428 | TCTAACAACTTTCGCTGGAAATTTC | 58.565 | 36.000 | 9.83 | 9.83 | 41.12 | 2.17 |
2691 | 5100 | 4.151867 | ACTTTCGCTGGAAATTTCTCGTAC | 59.848 | 41.667 | 17.42 | 1.61 | 41.12 | 3.67 |
2737 | 5146 | 4.760204 | ACAAAATTAGAGCTTTACCGTGCT | 59.240 | 37.500 | 0.00 | 0.00 | 42.82 | 4.40 |
3184 | 5593 | 3.422796 | GAGAGAGAGAGGTGGTTGTACA | 58.577 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3185 | 5594 | 3.158676 | AGAGAGAGAGGTGGTTGTACAC | 58.841 | 50.000 | 0.00 | 0.00 | 40.60 | 2.90 |
3186 | 5595 | 2.891580 | GAGAGAGAGGTGGTTGTACACA | 59.108 | 50.000 | 0.00 | 0.00 | 43.08 | 3.72 |
3187 | 5596 | 3.305720 | AGAGAGAGGTGGTTGTACACAA | 58.694 | 45.455 | 0.00 | 0.00 | 43.08 | 3.33 |
3188 | 5597 | 3.709653 | AGAGAGAGGTGGTTGTACACAAA | 59.290 | 43.478 | 0.00 | 0.00 | 43.08 | 2.83 |
3189 | 5598 | 3.805207 | AGAGAGGTGGTTGTACACAAAC | 58.195 | 45.455 | 3.13 | 3.13 | 43.57 | 2.93 |
3190 | 5599 | 3.454812 | AGAGAGGTGGTTGTACACAAACT | 59.545 | 43.478 | 11.20 | 0.00 | 43.65 | 2.66 |
3191 | 5600 | 3.541632 | AGAGGTGGTTGTACACAAACTG | 58.458 | 45.455 | 11.20 | 0.00 | 43.65 | 3.16 |
3192 | 5601 | 3.054655 | AGAGGTGGTTGTACACAAACTGT | 60.055 | 43.478 | 11.20 | 0.00 | 43.65 | 3.55 |
3193 | 5602 | 3.275999 | AGGTGGTTGTACACAAACTGTC | 58.724 | 45.455 | 11.20 | 2.81 | 43.65 | 3.51 |
3194 | 5603 | 3.011119 | GGTGGTTGTACACAAACTGTCA | 58.989 | 45.455 | 11.20 | 0.00 | 43.65 | 3.58 |
3195 | 5604 | 3.440872 | GGTGGTTGTACACAAACTGTCAA | 59.559 | 43.478 | 11.20 | 0.00 | 43.65 | 3.18 |
3196 | 5605 | 4.097286 | GGTGGTTGTACACAAACTGTCAAT | 59.903 | 41.667 | 11.20 | 0.00 | 43.65 | 2.57 |
3197 | 5606 | 5.034152 | GTGGTTGTACACAAACTGTCAATG | 58.966 | 41.667 | 11.20 | 0.00 | 43.65 | 2.82 |
3198 | 5607 | 4.944317 | TGGTTGTACACAAACTGTCAATGA | 59.056 | 37.500 | 11.20 | 0.00 | 43.65 | 2.57 |
3199 | 5608 | 5.416013 | TGGTTGTACACAAACTGTCAATGAA | 59.584 | 36.000 | 11.20 | 0.00 | 43.65 | 2.57 |
3200 | 5609 | 5.741982 | GGTTGTACACAAACTGTCAATGAAC | 59.258 | 40.000 | 2.86 | 0.00 | 40.28 | 3.18 |
3201 | 5610 | 6.318628 | GTTGTACACAAACTGTCAATGAACA | 58.681 | 36.000 | 0.00 | 0.00 | 37.63 | 3.18 |
3202 | 5611 | 6.502136 | TGTACACAAACTGTCAATGAACAA | 57.498 | 33.333 | 0.00 | 0.00 | 33.91 | 2.83 |
3203 | 5612 | 7.094508 | TGTACACAAACTGTCAATGAACAAT | 57.905 | 32.000 | 0.00 | 0.00 | 33.91 | 2.71 |
3204 | 5613 | 7.542890 | TGTACACAAACTGTCAATGAACAATT | 58.457 | 30.769 | 0.00 | 0.00 | 33.91 | 2.32 |
3205 | 5614 | 8.678199 | TGTACACAAACTGTCAATGAACAATTA | 58.322 | 29.630 | 0.00 | 0.00 | 33.91 | 1.40 |
3206 | 5615 | 7.985634 | ACACAAACTGTCAATGAACAATTAC | 57.014 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3207 | 5616 | 7.771183 | ACACAAACTGTCAATGAACAATTACT | 58.229 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
3208 | 5617 | 8.898761 | ACACAAACTGTCAATGAACAATTACTA | 58.101 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3209 | 5618 | 9.729023 | CACAAACTGTCAATGAACAATTACTAA | 57.271 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3210 | 5619 | 9.730420 | ACAAACTGTCAATGAACAATTACTAAC | 57.270 | 29.630 | 0.00 | 0.00 | 0.00 | 2.34 |
3211 | 5620 | 9.729023 | CAAACTGTCAATGAACAATTACTAACA | 57.271 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
3213 | 5622 | 9.950680 | AACTGTCAATGAACAATTACTAACAAG | 57.049 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
3214 | 5623 | 9.120538 | ACTGTCAATGAACAATTACTAACAAGT | 57.879 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
3215 | 5624 | 9.385902 | CTGTCAATGAACAATTACTAACAAGTG | 57.614 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3216 | 5625 | 8.349245 | TGTCAATGAACAATTACTAACAAGTGG | 58.651 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
3217 | 5626 | 7.326063 | GTCAATGAACAATTACTAACAAGTGGC | 59.674 | 37.037 | 0.00 | 0.00 | 0.00 | 5.01 |
3218 | 5627 | 6.892658 | ATGAACAATTACTAACAAGTGGCA | 57.107 | 33.333 | 0.00 | 0.00 | 0.00 | 4.92 |
3219 | 5628 | 6.067263 | TGAACAATTACTAACAAGTGGCAC | 57.933 | 37.500 | 10.29 | 10.29 | 0.00 | 5.01 |
3220 | 5629 | 5.590663 | TGAACAATTACTAACAAGTGGCACA | 59.409 | 36.000 | 21.41 | 0.00 | 0.00 | 4.57 |
3221 | 5630 | 6.095580 | TGAACAATTACTAACAAGTGGCACAA | 59.904 | 34.615 | 21.41 | 2.60 | 44.16 | 3.33 |
3222 | 5631 | 6.458232 | ACAATTACTAACAAGTGGCACAAA | 57.542 | 33.333 | 21.41 | 0.00 | 44.16 | 2.83 |
3223 | 5632 | 7.049799 | ACAATTACTAACAAGTGGCACAAAT | 57.950 | 32.000 | 21.41 | 2.28 | 44.16 | 2.32 |
3224 | 5633 | 7.496747 | ACAATTACTAACAAGTGGCACAAATT | 58.503 | 30.769 | 21.41 | 12.40 | 44.16 | 1.82 |
3225 | 5634 | 7.651704 | ACAATTACTAACAAGTGGCACAAATTC | 59.348 | 33.333 | 21.41 | 0.00 | 44.16 | 2.17 |
3226 | 5635 | 6.952773 | TTACTAACAAGTGGCACAAATTCT | 57.047 | 33.333 | 21.41 | 1.38 | 44.16 | 2.40 |
3227 | 5636 | 8.630054 | ATTACTAACAAGTGGCACAAATTCTA | 57.370 | 30.769 | 21.41 | 2.53 | 44.16 | 2.10 |
3228 | 5637 | 6.952773 | ACTAACAAGTGGCACAAATTCTAA | 57.047 | 33.333 | 21.41 | 0.00 | 44.16 | 2.10 |
3229 | 5638 | 7.341445 | ACTAACAAGTGGCACAAATTCTAAA | 57.659 | 32.000 | 21.41 | 0.00 | 44.16 | 1.85 |
3230 | 5639 | 7.425606 | ACTAACAAGTGGCACAAATTCTAAAG | 58.574 | 34.615 | 21.41 | 7.45 | 44.16 | 1.85 |
3231 | 5640 | 4.620982 | ACAAGTGGCACAAATTCTAAAGC | 58.379 | 39.130 | 21.41 | 0.00 | 44.16 | 3.51 |
3232 | 5641 | 3.559238 | AGTGGCACAAATTCTAAAGCG | 57.441 | 42.857 | 21.41 | 0.00 | 44.16 | 4.68 |
3233 | 5642 | 1.985684 | GTGGCACAAATTCTAAAGCGC | 59.014 | 47.619 | 13.86 | 0.00 | 44.16 | 5.92 |
3317 | 5726 | 3.187022 | CACATGTCAATGTTCGAGCTTGA | 59.813 | 43.478 | 0.00 | 0.00 | 44.94 | 3.02 |
3450 | 6457 | 6.718522 | TTTGGTTCCCTTTCGAAACTAATT | 57.281 | 33.333 | 6.47 | 0.00 | 30.38 | 1.40 |
3584 | 6591 | 6.660521 | AGACCAGCTGTGAATTTCATAAATCA | 59.339 | 34.615 | 13.81 | 0.00 | 0.00 | 2.57 |
3770 | 6777 | 4.270376 | GCATTTCCGCGGGCCATC | 62.270 | 66.667 | 27.83 | 8.62 | 0.00 | 3.51 |
3776 | 6783 | 4.215742 | CCGCGGGCCATCTCGTTA | 62.216 | 66.667 | 20.10 | 0.00 | 0.00 | 3.18 |
3782 | 6789 | 2.540973 | GCGGGCCATCTCGTTAAAAATC | 60.541 | 50.000 | 4.39 | 0.00 | 0.00 | 2.17 |
3784 | 6791 | 2.361119 | GGGCCATCTCGTTAAAAATCCC | 59.639 | 50.000 | 4.39 | 0.00 | 0.00 | 3.85 |
3785 | 6792 | 3.288092 | GGCCATCTCGTTAAAAATCCCT | 58.712 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
3786 | 6793 | 3.066760 | GGCCATCTCGTTAAAAATCCCTG | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
3787 | 6794 | 3.945285 | GCCATCTCGTTAAAAATCCCTGA | 59.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
3788 | 6795 | 4.580580 | GCCATCTCGTTAAAAATCCCTGAT | 59.419 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3789 | 6796 | 5.506317 | GCCATCTCGTTAAAAATCCCTGATG | 60.506 | 44.000 | 0.00 | 0.00 | 0.00 | 3.07 |
3790 | 6797 | 5.590259 | CCATCTCGTTAAAAATCCCTGATGT | 59.410 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3792 | 6799 | 5.183228 | TCTCGTTAAAAATCCCTGATGTCC | 58.817 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
3793 | 6800 | 4.912586 | TCGTTAAAAATCCCTGATGTCCA | 58.087 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
3794 | 6801 | 4.941263 | TCGTTAAAAATCCCTGATGTCCAG | 59.059 | 41.667 | 0.00 | 0.00 | 42.55 | 3.86 |
3876 | 6890 | 2.844839 | GCAGGTAGCGGGAGGGAT | 60.845 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3881 | 6895 | 1.465200 | GGTAGCGGGAGGGATCACTC | 61.465 | 65.000 | 17.19 | 17.19 | 36.76 | 3.51 |
3912 | 6926 | 3.519930 | GCCTCCCGTCGTCCTCTC | 61.520 | 72.222 | 0.00 | 0.00 | 0.00 | 3.20 |
3913 | 6927 | 2.045242 | CCTCCCGTCGTCCTCTCA | 60.045 | 66.667 | 0.00 | 0.00 | 0.00 | 3.27 |
3928 | 6942 | 0.613853 | TCTCATCCCCCGTCGTCTTT | 60.614 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3930 | 6944 | 1.687123 | CTCATCCCCCGTCGTCTTTAT | 59.313 | 52.381 | 0.00 | 0.00 | 0.00 | 1.40 |
3939 | 6953 | 4.217767 | CCCCGTCGTCTTTATCATCTGATA | 59.782 | 45.833 | 0.00 | 0.00 | 36.05 | 2.15 |
3942 | 6956 | 6.081049 | CCGTCGTCTTTATCATCTGATAGAC | 58.919 | 44.000 | 10.91 | 10.91 | 38.18 | 2.59 |
3955 | 6969 | 2.430694 | CTGATAGACCGATGGACACCAA | 59.569 | 50.000 | 0.00 | 0.00 | 36.95 | 3.67 |
4005 | 7033 | 0.610785 | ACGGCAAACCCATTCCGATT | 60.611 | 50.000 | 6.52 | 0.00 | 44.23 | 3.34 |
4010 | 7038 | 2.731027 | GCAAACCCATTCCGATTTCGTC | 60.731 | 50.000 | 0.00 | 0.00 | 37.74 | 4.20 |
4029 | 7057 | 2.676121 | TTCGGGAAGGCCGTCGTA | 60.676 | 61.111 | 12.79 | 0.00 | 33.83 | 3.43 |
4102 | 7130 | 3.441290 | CGCCTCCTCGTCCTCGTT | 61.441 | 66.667 | 0.00 | 0.00 | 38.33 | 3.85 |
4103 | 7131 | 2.971452 | GCCTCCTCGTCCTCGTTT | 59.029 | 61.111 | 0.00 | 0.00 | 38.33 | 3.60 |
4105 | 7133 | 1.874345 | GCCTCCTCGTCCTCGTTTCA | 61.874 | 60.000 | 0.00 | 0.00 | 38.33 | 2.69 |
4108 | 7136 | 2.263077 | CTCCTCGTCCTCGTTTCAATG | 58.737 | 52.381 | 0.00 | 0.00 | 38.33 | 2.82 |
4109 | 7137 | 1.616865 | TCCTCGTCCTCGTTTCAATGT | 59.383 | 47.619 | 0.00 | 0.00 | 38.33 | 2.71 |
4110 | 7138 | 1.993370 | CCTCGTCCTCGTTTCAATGTC | 59.007 | 52.381 | 0.00 | 0.00 | 38.33 | 3.06 |
4111 | 7139 | 1.993370 | CTCGTCCTCGTTTCAATGTCC | 59.007 | 52.381 | 0.00 | 0.00 | 38.33 | 4.02 |
4112 | 7140 | 0.713883 | CGTCCTCGTTTCAATGTCCG | 59.286 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4113 | 7141 | 0.442699 | GTCCTCGTTTCAATGTCCGC | 59.557 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
4230 | 7291 | 4.758251 | CTCGCCATGGTGACCGCA | 62.758 | 66.667 | 24.20 | 3.56 | 0.00 | 5.69 |
4275 | 7336 | 3.082579 | GCTCCTGCGATTCCTCGGT | 62.083 | 63.158 | 0.00 | 0.00 | 45.15 | 4.69 |
4288 | 7349 | 3.610791 | CTCGGTTCAGCGTCGCTCA | 62.611 | 63.158 | 18.76 | 0.00 | 36.40 | 4.26 |
4629 | 7698 | 1.443872 | CCCGTTCGACCTCTTCACG | 60.444 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
4752 | 7821 | 1.200716 | CTGCCCTACAAGAACGACGTA | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 3.57 |
4754 | 7823 | 1.200948 | GCCCTACAAGAACGACGTACT | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
4785 | 7854 | 5.768662 | AGCTGATGCATTCTACATGCTTATT | 59.231 | 36.000 | 0.00 | 0.00 | 44.79 | 1.40 |
4868 | 7937 | 3.405831 | CAGAGTTCATCAGGAAGCACAA | 58.594 | 45.455 | 0.00 | 0.00 | 35.82 | 3.33 |
4876 | 7945 | 2.281484 | GGAAGCACAAGCCGGTGA | 60.281 | 61.111 | 1.90 | 0.00 | 43.56 | 4.02 |
4947 | 8048 | 3.129502 | TTCGAGGCGTCGTCGGAT | 61.130 | 61.111 | 26.11 | 0.00 | 46.85 | 4.18 |
4951 | 8052 | 1.081376 | GAGGCGTCGTCGGATATGG | 60.081 | 63.158 | 3.90 | 0.00 | 37.56 | 2.74 |
4982 | 8084 | 1.064017 | TGTCACCAGGGCTTTCAAAGT | 60.064 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
5025 | 8127 | 3.882326 | AGCGGAGATGGGCATGGG | 61.882 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
5043 | 8145 | 1.758514 | GCAGGTCTCCATCTCCCGA | 60.759 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
5059 | 8161 | 0.249322 | CCGAGTGTACCATAAGGCCG | 60.249 | 60.000 | 0.00 | 0.00 | 39.06 | 6.13 |
5128 | 8268 | 4.540153 | GCATGGATGGTAGTGCGT | 57.460 | 55.556 | 0.00 | 0.00 | 0.00 | 5.24 |
5138 | 8278 | 4.023536 | GGATGGTAGTGCGTTTGAGAAAAA | 60.024 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
5554 | 8694 | 4.882671 | TGTTGAAAGACAAGCTGAACTC | 57.117 | 40.909 | 0.00 | 0.00 | 39.30 | 3.01 |
5627 | 8789 | 5.066913 | ACTCTTTTCACATTTTCCCTCCT | 57.933 | 39.130 | 0.00 | 0.00 | 0.00 | 3.69 |
5666 | 8828 | 3.883489 | AGCAAACCACCTACAGTTTTCTC | 59.117 | 43.478 | 0.00 | 0.00 | 34.02 | 2.87 |
5979 | 9783 | 3.620488 | TCAGTCTTCCACAAGCAAAAGT | 58.380 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
5990 | 9794 | 6.600032 | TCCACAAGCAAAAGTAAGTCTTGTTA | 59.400 | 34.615 | 3.50 | 0.00 | 43.09 | 2.41 |
6002 | 9806 | 9.520515 | AAGTAAGTCTTGTTATGAATTCCACAT | 57.479 | 29.630 | 2.27 | 0.00 | 34.77 | 3.21 |
6058 | 9862 | 3.816994 | ACCACCTACTGTTTTCTCCAAC | 58.183 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
6063 | 9867 | 2.844122 | ACTGTTTTCTCCAACGCAAC | 57.156 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
6072 | 9876 | 2.243957 | CCAACGCAACGTGCAGAGA | 61.244 | 57.895 | 9.95 | 0.00 | 45.36 | 3.10 |
6073 | 9877 | 1.202568 | CAACGCAACGTGCAGAGAG | 59.797 | 57.895 | 9.95 | 0.00 | 45.36 | 3.20 |
6074 | 9878 | 1.067416 | AACGCAACGTGCAGAGAGA | 59.933 | 52.632 | 9.95 | 0.00 | 45.36 | 3.10 |
6178 | 10004 | 0.244450 | CGCCATGTGCAAAGGAACAT | 59.756 | 50.000 | 4.63 | 0.00 | 44.50 | 2.71 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 7.066284 | ATGCATCTCATATCATGTCATCATGTG | 59.934 | 37.037 | 0.00 | 0.00 | 41.56 | 3.21 |
10 | 11 | 6.594159 | TGTCATGCATCTCATATCATGTCATC | 59.406 | 38.462 | 0.00 | 0.00 | 37.95 | 2.92 |
11 | 12 | 6.472887 | TGTCATGCATCTCATATCATGTCAT | 58.527 | 36.000 | 0.00 | 0.00 | 37.95 | 3.06 |
14 | 15 | 6.472887 | TCATGTCATGCATCTCATATCATGT | 58.527 | 36.000 | 8.03 | 0.00 | 41.17 | 3.21 |
15 | 16 | 6.985188 | TCATGTCATGCATCTCATATCATG | 57.015 | 37.500 | 8.03 | 10.74 | 41.42 | 3.07 |
17 | 18 | 6.292923 | TGTTCATGTCATGCATCTCATATCA | 58.707 | 36.000 | 8.03 | 8.85 | 35.19 | 2.15 |
18 | 19 | 6.796705 | TGTTCATGTCATGCATCTCATATC | 57.203 | 37.500 | 8.03 | 7.09 | 35.19 | 1.63 |
19 | 20 | 7.576861 | TTTGTTCATGTCATGCATCTCATAT | 57.423 | 32.000 | 8.03 | 0.00 | 35.19 | 1.78 |
20 | 21 | 7.393841 | TTTTGTTCATGTCATGCATCTCATA | 57.606 | 32.000 | 8.03 | 0.00 | 35.19 | 2.15 |
21 | 22 | 5.907866 | TTTGTTCATGTCATGCATCTCAT | 57.092 | 34.783 | 8.03 | 1.47 | 35.19 | 2.90 |
22 | 23 | 5.708877 | TTTTGTTCATGTCATGCATCTCA | 57.291 | 34.783 | 8.03 | 0.00 | 35.19 | 3.27 |
23 | 24 | 5.005394 | GCATTTTGTTCATGTCATGCATCTC | 59.995 | 40.000 | 8.03 | 0.00 | 35.19 | 2.75 |
25 | 26 | 4.627900 | TGCATTTTGTTCATGTCATGCATC | 59.372 | 37.500 | 8.03 | 2.04 | 38.64 | 3.91 |
26 | 27 | 4.570930 | TGCATTTTGTTCATGTCATGCAT | 58.429 | 34.783 | 8.03 | 0.00 | 38.64 | 3.96 |
27 | 28 | 3.991367 | TGCATTTTGTTCATGTCATGCA | 58.009 | 36.364 | 8.03 | 12.50 | 40.84 | 3.96 |
28 | 29 | 4.994220 | TTGCATTTTGTTCATGTCATGC | 57.006 | 36.364 | 8.03 | 2.31 | 0.00 | 4.06 |
29 | 30 | 6.716438 | TGTTTTGCATTTTGTTCATGTCATG | 58.284 | 32.000 | 6.47 | 6.47 | 0.00 | 3.07 |
33 | 34 | 7.750014 | GTCTTTTGTTTTGCATTTTGTTCATGT | 59.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.21 |
34 | 35 | 7.749570 | TGTCTTTTGTTTTGCATTTTGTTCATG | 59.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
35 | 36 | 7.814642 | TGTCTTTTGTTTTGCATTTTGTTCAT | 58.185 | 26.923 | 0.00 | 0.00 | 0.00 | 2.57 |
36 | 37 | 7.194607 | TGTCTTTTGTTTTGCATTTTGTTCA | 57.805 | 28.000 | 0.00 | 0.00 | 0.00 | 3.18 |
37 | 38 | 8.499514 | TTTGTCTTTTGTTTTGCATTTTGTTC | 57.500 | 26.923 | 0.00 | 0.00 | 0.00 | 3.18 |
39 | 40 | 9.127006 | GATTTTGTCTTTTGTTTTGCATTTTGT | 57.873 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
40 | 41 | 8.585436 | GGATTTTGTCTTTTGTTTTGCATTTTG | 58.415 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
44 | 45 | 5.814705 | TCGGATTTTGTCTTTTGTTTTGCAT | 59.185 | 32.000 | 0.00 | 0.00 | 0.00 | 3.96 |
45 | 46 | 5.062809 | GTCGGATTTTGTCTTTTGTTTTGCA | 59.937 | 36.000 | 0.00 | 0.00 | 0.00 | 4.08 |
46 | 47 | 5.489335 | GTCGGATTTTGTCTTTTGTTTTGC | 58.511 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
47 | 48 | 5.578727 | TGGTCGGATTTTGTCTTTTGTTTTG | 59.421 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
50 | 51 | 4.993029 | TGGTCGGATTTTGTCTTTTGTT | 57.007 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
51 | 52 | 4.582656 | TCATGGTCGGATTTTGTCTTTTGT | 59.417 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
54 | 55 | 5.278957 | CCTTTCATGGTCGGATTTTGTCTTT | 60.279 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
55 | 56 | 4.218417 | CCTTTCATGGTCGGATTTTGTCTT | 59.782 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
56 | 57 | 3.758554 | CCTTTCATGGTCGGATTTTGTCT | 59.241 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
57 | 58 | 3.756434 | TCCTTTCATGGTCGGATTTTGTC | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
58 | 59 | 3.761897 | TCCTTTCATGGTCGGATTTTGT | 58.238 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
59 | 60 | 4.782019 | TTCCTTTCATGGTCGGATTTTG | 57.218 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
60 | 61 | 6.833416 | TGATATTCCTTTCATGGTCGGATTTT | 59.167 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
62 | 63 | 5.940617 | TGATATTCCTTTCATGGTCGGATT | 58.059 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
64 | 65 | 5.567037 | ATGATATTCCTTTCATGGTCGGA | 57.433 | 39.130 | 0.00 | 0.00 | 31.51 | 4.55 |
65 | 66 | 6.710295 | TGTTATGATATTCCTTTCATGGTCGG | 59.290 | 38.462 | 0.00 | 0.00 | 34.52 | 4.79 |
67 | 68 | 8.450578 | TGTGTTATGATATTCCTTTCATGGTC | 57.549 | 34.615 | 0.00 | 0.00 | 34.52 | 4.02 |
72 | 73 | 9.051679 | CGGTTATGTGTTATGATATTCCTTTCA | 57.948 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
73 | 74 | 9.268268 | TCGGTTATGTGTTATGATATTCCTTTC | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
75 | 76 | 9.621629 | TTTCGGTTATGTGTTATGATATTCCTT | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
76 | 77 | 9.621629 | TTTTCGGTTATGTGTTATGATATTCCT | 57.378 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
80 | 81 | 8.296713 | GCCATTTTCGGTTATGTGTTATGATAT | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
82 | 83 | 6.096141 | TGCCATTTTCGGTTATGTGTTATGAT | 59.904 | 34.615 | 0.00 | 0.00 | 0.00 | 2.45 |
83 | 84 | 5.416013 | TGCCATTTTCGGTTATGTGTTATGA | 59.584 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
84 | 85 | 5.645624 | TGCCATTTTCGGTTATGTGTTATG | 58.354 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
85 | 86 | 5.906113 | TGCCATTTTCGGTTATGTGTTAT | 57.094 | 34.783 | 0.00 | 0.00 | 0.00 | 1.89 |
86 | 87 | 5.473846 | TCTTGCCATTTTCGGTTATGTGTTA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
88 | 89 | 3.823873 | TCTTGCCATTTTCGGTTATGTGT | 59.176 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
89 | 90 | 4.082787 | ACTCTTGCCATTTTCGGTTATGTG | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
90 | 91 | 4.079253 | ACTCTTGCCATTTTCGGTTATGT | 58.921 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
95 | 96 | 1.613437 | CCAACTCTTGCCATTTTCGGT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
99 | 100 | 4.892934 | TGTAACTCCAACTCTTGCCATTTT | 59.107 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
101 | 102 | 4.098914 | TGTAACTCCAACTCTTGCCATT | 57.901 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
102 | 103 | 3.788227 | TGTAACTCCAACTCTTGCCAT | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
103 | 104 | 3.569194 | TTGTAACTCCAACTCTTGCCA | 57.431 | 42.857 | 0.00 | 0.00 | 0.00 | 4.92 |
104 | 105 | 6.374333 | TCATATTTGTAACTCCAACTCTTGCC | 59.626 | 38.462 | 0.00 | 0.00 | 0.00 | 4.52 |
105 | 106 | 7.377766 | TCATATTTGTAACTCCAACTCTTGC | 57.622 | 36.000 | 0.00 | 0.00 | 0.00 | 4.01 |
108 | 109 | 9.574516 | ACTTTTCATATTTGTAACTCCAACTCT | 57.425 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
117 | 118 | 9.498307 | CCGGATGTAACTTTTCATATTTGTAAC | 57.502 | 33.333 | 0.00 | 0.00 | 0.00 | 2.50 |
119 | 120 | 7.283580 | CCCCGGATGTAACTTTTCATATTTGTA | 59.716 | 37.037 | 0.73 | 0.00 | 0.00 | 2.41 |
120 | 121 | 6.096282 | CCCCGGATGTAACTTTTCATATTTGT | 59.904 | 38.462 | 0.73 | 0.00 | 0.00 | 2.83 |
121 | 122 | 6.096282 | ACCCCGGATGTAACTTTTCATATTTG | 59.904 | 38.462 | 0.73 | 0.00 | 0.00 | 2.32 |
122 | 123 | 6.096282 | CACCCCGGATGTAACTTTTCATATTT | 59.904 | 38.462 | 0.73 | 0.00 | 0.00 | 1.40 |
124 | 125 | 5.130350 | CACCCCGGATGTAACTTTTCATAT | 58.870 | 41.667 | 0.73 | 0.00 | 0.00 | 1.78 |
126 | 127 | 3.245122 | ACACCCCGGATGTAACTTTTCAT | 60.245 | 43.478 | 0.73 | 0.00 | 0.00 | 2.57 |
127 | 128 | 2.106857 | ACACCCCGGATGTAACTTTTCA | 59.893 | 45.455 | 0.73 | 0.00 | 0.00 | 2.69 |
129 | 130 | 2.963599 | ACACCCCGGATGTAACTTTT | 57.036 | 45.000 | 0.73 | 0.00 | 0.00 | 2.27 |
131 | 132 | 2.638855 | TGTAACACCCCGGATGTAACTT | 59.361 | 45.455 | 0.73 | 0.00 | 0.00 | 2.66 |
133 | 134 | 2.234414 | TCTGTAACACCCCGGATGTAAC | 59.766 | 50.000 | 0.73 | 0.05 | 0.00 | 2.50 |
136 | 137 | 1.002773 | GTTCTGTAACACCCCGGATGT | 59.997 | 52.381 | 0.73 | 3.79 | 35.56 | 3.06 |
139 | 140 | 1.818959 | CGGTTCTGTAACACCCCGGA | 61.819 | 60.000 | 0.73 | 0.00 | 37.34 | 5.14 |
140 | 141 | 1.375013 | CGGTTCTGTAACACCCCGG | 60.375 | 63.158 | 0.00 | 0.00 | 37.34 | 5.73 |
141 | 142 | 2.030958 | GCGGTTCTGTAACACCCCG | 61.031 | 63.158 | 0.00 | 0.00 | 37.34 | 5.73 |
144 | 145 | 0.882927 | TGCTGCGGTTCTGTAACACC | 60.883 | 55.000 | 0.00 | 0.00 | 37.34 | 4.16 |
145 | 146 | 0.234884 | GTGCTGCGGTTCTGTAACAC | 59.765 | 55.000 | 0.00 | 0.00 | 37.34 | 3.32 |
146 | 147 | 1.218875 | CGTGCTGCGGTTCTGTAACA | 61.219 | 55.000 | 0.00 | 0.00 | 37.34 | 2.41 |
147 | 148 | 1.491563 | CGTGCTGCGGTTCTGTAAC | 59.508 | 57.895 | 0.00 | 0.00 | 36.85 | 2.50 |
148 | 149 | 3.945436 | CGTGCTGCGGTTCTGTAA | 58.055 | 55.556 | 0.00 | 0.00 | 36.85 | 2.41 |
161 | 162 | 4.157120 | ATACCCACCGCTCCGTGC | 62.157 | 66.667 | 0.00 | 0.00 | 38.57 | 5.34 |
163 | 164 | 3.467226 | CCATACCCACCGCTCCGT | 61.467 | 66.667 | 0.00 | 0.00 | 0.00 | 4.69 |
165 | 166 | 4.910585 | CGCCATACCCACCGCTCC | 62.911 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
166 | 167 | 4.910585 | CCGCCATACCCACCGCTC | 62.911 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
168 | 169 | 4.910585 | CTCCGCCATACCCACCGC | 62.911 | 72.222 | 0.00 | 0.00 | 0.00 | 5.68 |
169 | 170 | 4.910585 | GCTCCGCCATACCCACCG | 62.911 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
170 | 171 | 3.480133 | AGCTCCGCCATACCCACC | 61.480 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
171 | 172 | 2.203070 | CAGCTCCGCCATACCCAC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
172 | 173 | 4.175337 | GCAGCTCCGCCATACCCA | 62.175 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
173 | 174 | 4.175337 | TGCAGCTCCGCCATACCC | 62.175 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
174 | 175 | 2.590007 | CTGCAGCTCCGCCATACC | 60.590 | 66.667 | 0.00 | 0.00 | 0.00 | 2.73 |
175 | 176 | 1.884926 | GACTGCAGCTCCGCCATAC | 60.885 | 63.158 | 15.27 | 0.00 | 0.00 | 2.39 |
176 | 177 | 1.898330 | TTGACTGCAGCTCCGCCATA | 61.898 | 55.000 | 15.27 | 0.00 | 0.00 | 2.74 |
177 | 178 | 3.258228 | TTGACTGCAGCTCCGCCAT | 62.258 | 57.895 | 15.27 | 0.00 | 0.00 | 4.40 |
198 | 200 | 1.328680 | GCCAGCGAGTACAACATCATG | 59.671 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
199 | 201 | 1.656652 | GCCAGCGAGTACAACATCAT | 58.343 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
250 | 252 | 1.304254 | CGGTCACAACACCATGAACA | 58.696 | 50.000 | 0.00 | 0.00 | 36.01 | 3.18 |
283 | 285 | 1.811266 | CAATGTAGCTCTGCCGCGT | 60.811 | 57.895 | 4.92 | 0.00 | 34.40 | 6.01 |
285 | 287 | 1.647545 | TTGCAATGTAGCTCTGCCGC | 61.648 | 55.000 | 0.00 | 0.00 | 35.13 | 6.53 |
290 | 292 | 2.674852 | CGATGTGTTGCAATGTAGCTCT | 59.325 | 45.455 | 0.59 | 0.00 | 34.99 | 4.09 |
296 | 298 | 0.953727 | AGCACGATGTGTTGCAATGT | 59.046 | 45.000 | 0.59 | 0.00 | 35.75 | 2.71 |
322 | 324 | 3.000819 | TCGCCGGTGAGGTCCATT | 61.001 | 61.111 | 15.21 | 0.00 | 43.70 | 3.16 |
323 | 325 | 3.771160 | GTCGCCGGTGAGGTCCAT | 61.771 | 66.667 | 20.25 | 0.00 | 43.70 | 3.41 |
335 | 337 | 1.286260 | CACTATAGCTCCCGTCGCC | 59.714 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
345 | 347 | 2.730626 | CGATGCGCTCCACTATAGC | 58.269 | 57.895 | 9.73 | 0.00 | 36.60 | 2.97 |
371 | 373 | 2.674033 | TTGCAATGCAGCTCCGCT | 60.674 | 55.556 | 8.31 | 0.00 | 40.61 | 5.52 |
372 | 374 | 2.505557 | GTTGCAATGCAGCTCCGC | 60.506 | 61.111 | 14.79 | 0.00 | 40.61 | 5.54 |
373 | 375 | 0.731514 | CTTGTTGCAATGCAGCTCCG | 60.732 | 55.000 | 21.80 | 7.39 | 40.35 | 4.63 |
374 | 376 | 0.316204 | ACTTGTTGCAATGCAGCTCC | 59.684 | 50.000 | 21.80 | 6.49 | 40.35 | 4.70 |
375 | 377 | 1.001048 | TGACTTGTTGCAATGCAGCTC | 60.001 | 47.619 | 21.80 | 12.28 | 40.35 | 4.09 |
376 | 378 | 1.034356 | TGACTTGTTGCAATGCAGCT | 58.966 | 45.000 | 21.80 | 2.79 | 40.35 | 4.24 |
377 | 379 | 1.724623 | CATGACTTGTTGCAATGCAGC | 59.275 | 47.619 | 15.18 | 15.18 | 40.61 | 5.25 |
378 | 380 | 1.724623 | GCATGACTTGTTGCAATGCAG | 59.275 | 47.619 | 8.31 | 7.34 | 40.61 | 4.41 |
379 | 381 | 1.341852 | AGCATGACTTGTTGCAATGCA | 59.658 | 42.857 | 18.22 | 2.72 | 41.35 | 3.96 |
380 | 382 | 1.724623 | CAGCATGACTTGTTGCAATGC | 59.275 | 47.619 | 0.59 | 6.62 | 41.35 | 3.56 |
386 | 388 | 0.110056 | GGTCGCAGCATGACTTGTTG | 60.110 | 55.000 | 0.00 | 1.39 | 39.69 | 3.33 |
387 | 389 | 1.568612 | CGGTCGCAGCATGACTTGTT | 61.569 | 55.000 | 0.00 | 0.00 | 39.69 | 2.83 |
388 | 390 | 2.029288 | CGGTCGCAGCATGACTTGT | 61.029 | 57.895 | 0.00 | 0.00 | 39.69 | 3.16 |
389 | 391 | 2.743752 | CCGGTCGCAGCATGACTTG | 61.744 | 63.158 | 0.00 | 0.00 | 39.69 | 3.16 |
390 | 392 | 2.434884 | CCGGTCGCAGCATGACTT | 60.435 | 61.111 | 0.00 | 0.00 | 39.69 | 3.01 |
391 | 393 | 3.695606 | ACCGGTCGCAGCATGACT | 61.696 | 61.111 | 0.00 | 0.00 | 39.69 | 3.41 |
392 | 394 | 3.490759 | CACCGGTCGCAGCATGAC | 61.491 | 66.667 | 2.59 | 0.00 | 39.69 | 3.06 |
393 | 395 | 4.758251 | CCACCGGTCGCAGCATGA | 62.758 | 66.667 | 2.59 | 0.00 | 39.69 | 3.07 |
394 | 396 | 4.758251 | TCCACCGGTCGCAGCATG | 62.758 | 66.667 | 2.59 | 0.00 | 40.87 | 4.06 |
395 | 397 | 4.760047 | GTCCACCGGTCGCAGCAT | 62.760 | 66.667 | 2.59 | 0.00 | 0.00 | 3.79 |
398 | 400 | 4.436998 | GAGGTCCACCGGTCGCAG | 62.437 | 72.222 | 2.59 | 0.00 | 42.08 | 5.18 |
400 | 402 | 4.736896 | GTGAGGTCCACCGGTCGC | 62.737 | 72.222 | 2.59 | 0.00 | 42.08 | 5.19 |
422 | 424 | 4.648626 | TGCACTGCAGCTCCCACC | 62.649 | 66.667 | 15.27 | 0.00 | 33.32 | 4.61 |
454 | 456 | 4.994471 | TGCACTGCAGCTCCACCG | 62.994 | 66.667 | 15.27 | 0.00 | 33.32 | 4.94 |
455 | 457 | 2.595463 | TTGCACTGCAGCTCCACC | 60.595 | 61.111 | 15.27 | 0.00 | 40.61 | 4.61 |
456 | 458 | 2.641559 | GTTGCACTGCAGCTCCAC | 59.358 | 61.111 | 15.27 | 3.93 | 40.61 | 4.02 |
457 | 459 | 2.974148 | CGTTGCACTGCAGCTCCA | 60.974 | 61.111 | 15.27 | 5.48 | 40.61 | 3.86 |
458 | 460 | 4.395583 | GCGTTGCACTGCAGCTCC | 62.396 | 66.667 | 15.27 | 2.49 | 40.61 | 4.70 |
459 | 461 | 4.731503 | CGCGTTGCACTGCAGCTC | 62.732 | 66.667 | 15.27 | 6.22 | 40.61 | 4.09 |
462 | 464 | 4.707840 | CGACGCGTTGCACTGCAG | 62.708 | 66.667 | 15.53 | 13.48 | 40.61 | 4.41 |
464 | 466 | 4.993945 | CACGACGCGTTGCACTGC | 62.994 | 66.667 | 26.19 | 3.92 | 38.32 | 4.40 |
465 | 467 | 4.993945 | GCACGACGCGTTGCACTG | 62.994 | 66.667 | 26.42 | 18.48 | 38.32 | 3.66 |
482 | 484 | 4.436998 | GAGGTCCACCGGTCGCAG | 62.437 | 72.222 | 2.59 | 0.00 | 42.08 | 5.18 |
484 | 486 | 4.736896 | GTGAGGTCCACCGGTCGC | 62.737 | 72.222 | 2.59 | 0.00 | 42.08 | 5.19 |
526 | 528 | 2.890474 | CCACCATCGCCGCTGTAC | 60.890 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
538 | 540 | 1.990424 | CAGGTCATAGCACCCACCA | 59.010 | 57.895 | 0.00 | 0.00 | 37.09 | 4.17 |
539 | 541 | 1.452108 | GCAGGTCATAGCACCCACC | 60.452 | 63.158 | 0.00 | 0.00 | 37.09 | 4.61 |
541 | 543 | 2.584064 | CGCAGGTCATAGCACCCA | 59.416 | 61.111 | 0.00 | 0.00 | 37.09 | 4.51 |
555 | 557 | 2.260869 | GCAAAGCTCAACTCCCGCA | 61.261 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
587 | 589 | 1.000506 | TCAGTAGCAACGTCACCTTCC | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
593 | 595 | 2.390938 | CGTTTCTCAGTAGCAACGTCA | 58.609 | 47.619 | 0.00 | 0.00 | 44.14 | 4.35 |
597 | 599 | 0.438830 | CCGCGTTTCTCAGTAGCAAC | 59.561 | 55.000 | 4.92 | 0.00 | 0.00 | 4.17 |
603 | 605 | 2.342648 | GTCCCCGCGTTTCTCAGT | 59.657 | 61.111 | 4.92 | 0.00 | 0.00 | 3.41 |
613 | 615 | 2.185608 | GAGCTTCTCTGTCCCCGC | 59.814 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
614 | 616 | 2.492090 | CGAGCTTCTCTGTCCCCG | 59.508 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
624 | 627 | 4.168291 | CAGGCCCCTCCGAGCTTC | 62.168 | 72.222 | 0.00 | 0.00 | 40.77 | 3.86 |
626 | 629 | 4.488911 | ATCAGGCCCCTCCGAGCT | 62.489 | 66.667 | 0.00 | 0.00 | 40.77 | 4.09 |
637 | 640 | 3.753070 | GACGGACGTCGGATCAGGC | 62.753 | 68.421 | 27.46 | 5.13 | 44.45 | 4.85 |
659 | 662 | 0.521735 | GACAGCCGTTTGATTGTCCC | 59.478 | 55.000 | 0.00 | 0.00 | 35.15 | 4.46 |
661 | 664 | 2.604614 | GGTTGACAGCCGTTTGATTGTC | 60.605 | 50.000 | 0.00 | 0.00 | 40.17 | 3.18 |
662 | 665 | 1.336755 | GGTTGACAGCCGTTTGATTGT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
684 | 687 | 2.238521 | TGAAGGGCCACAAAATCAGTC | 58.761 | 47.619 | 6.18 | 0.00 | 0.00 | 3.51 |
686 | 689 | 3.749665 | TTTGAAGGGCCACAAAATCAG | 57.250 | 42.857 | 20.70 | 0.00 | 33.90 | 2.90 |
687 | 690 | 4.494091 | TTTTTGAAGGGCCACAAAATCA | 57.506 | 36.364 | 28.39 | 18.62 | 42.67 | 2.57 |
755 | 770 | 4.814294 | GGTACCGCTGGTCCGCTG | 62.814 | 72.222 | 0.00 | 1.06 | 37.09 | 5.18 |
757 | 772 | 4.382320 | TTGGTACCGCTGGTCCGC | 62.382 | 66.667 | 7.57 | 0.00 | 37.09 | 5.54 |
758 | 773 | 2.433664 | GTTGGTACCGCTGGTCCG | 60.434 | 66.667 | 7.57 | 0.00 | 37.09 | 4.79 |
759 | 774 | 1.079336 | GAGTTGGTACCGCTGGTCC | 60.079 | 63.158 | 12.77 | 6.43 | 37.09 | 4.46 |
760 | 775 | 1.079336 | GGAGTTGGTACCGCTGGTC | 60.079 | 63.158 | 12.77 | 2.83 | 37.09 | 4.02 |
761 | 776 | 2.939261 | CGGAGTTGGTACCGCTGGT | 61.939 | 63.158 | 12.77 | 5.58 | 42.55 | 4.00 |
762 | 777 | 2.125673 | CGGAGTTGGTACCGCTGG | 60.126 | 66.667 | 12.77 | 2.50 | 42.55 | 4.85 |
787 | 802 | 2.454832 | CTTGGCGCCAGGACTCTTGA | 62.455 | 60.000 | 33.27 | 12.36 | 0.00 | 3.02 |
815 | 830 | 5.128171 | AGCAAACTATAATCCGAGTACACCA | 59.872 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
983 | 1051 | 2.941480 | CCATGGCTAGCTGGAAGATTT | 58.059 | 47.619 | 16.22 | 0.00 | 34.07 | 2.17 |
984 | 1052 | 1.478288 | GCCATGGCTAGCTGGAAGATT | 60.478 | 52.381 | 29.98 | 0.00 | 38.26 | 2.40 |
985 | 1053 | 0.110104 | GCCATGGCTAGCTGGAAGAT | 59.890 | 55.000 | 29.98 | 1.54 | 38.26 | 2.40 |
986 | 1054 | 1.528824 | GCCATGGCTAGCTGGAAGA | 59.471 | 57.895 | 29.98 | 0.00 | 38.26 | 2.87 |
987 | 1055 | 1.890979 | CGCCATGGCTAGCTGGAAG | 60.891 | 63.158 | 33.07 | 11.50 | 39.32 | 3.46 |
988 | 1056 | 2.190313 | CGCCATGGCTAGCTGGAA | 59.810 | 61.111 | 33.07 | 4.99 | 39.32 | 3.53 |
989 | 1057 | 3.865383 | CCGCCATGGCTAGCTGGA | 61.865 | 66.667 | 33.07 | 5.73 | 39.32 | 3.86 |
1151 | 1369 | 4.069232 | CTGGAGCGCCAAGACGGA | 62.069 | 66.667 | 11.38 | 0.00 | 45.41 | 4.69 |
1207 | 1686 | 2.371841 | AGGTGGTCTTGCAGTAATCACA | 59.628 | 45.455 | 9.70 | 0.00 | 0.00 | 3.58 |
1506 | 3566 | 1.592223 | GCCGTCAGCTACCAACTCT | 59.408 | 57.895 | 0.00 | 0.00 | 38.99 | 3.24 |
1623 | 3683 | 1.006220 | CGTGTGTAGGCTGTGCTCA | 60.006 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
1667 | 3727 | 4.707030 | TCGGTGAAGTACGATGTGTATT | 57.293 | 40.909 | 0.00 | 0.00 | 35.02 | 1.89 |
1689 | 3749 | 3.017442 | CTCATACTCTTCACGTCCCTCA | 58.983 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1801 | 3866 | 3.467803 | GCCCACCTATCTGTAACATGTC | 58.532 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2252 | 4323 | 2.620367 | CCCGTCCATTCCAGGAAAATCA | 60.620 | 50.000 | 5.81 | 0.00 | 39.92 | 2.57 |
2272 | 4343 | 2.545322 | CCGGCTCTACGAATAACTTCCC | 60.545 | 54.545 | 0.00 | 0.00 | 35.47 | 3.97 |
2313 | 4384 | 2.040813 | AGATGCCACCTGATGTTGACTT | 59.959 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
2315 | 4386 | 2.119801 | AGATGCCACCTGATGTTGAC | 57.880 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2316 | 4387 | 2.840038 | ACTAGATGCCACCTGATGTTGA | 59.160 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2317 | 4388 | 3.201290 | GACTAGATGCCACCTGATGTTG | 58.799 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2319 | 4390 | 2.433604 | CTGACTAGATGCCACCTGATGT | 59.566 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2320 | 4391 | 2.224233 | CCTGACTAGATGCCACCTGATG | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.07 |
2423 | 4527 | 4.839668 | ACAACTCATCCTCTCTATACGC | 57.160 | 45.455 | 0.00 | 0.00 | 0.00 | 4.42 |
2503 | 4636 | 0.253610 | AAGTTGGACGGGTGACACAA | 59.746 | 50.000 | 8.08 | 0.00 | 0.00 | 3.33 |
2600 | 5009 | 5.862323 | ACGCACAGTCAGTACAACTTTATAG | 59.138 | 40.000 | 0.00 | 0.00 | 0.00 | 1.31 |
2617 | 5026 | 6.424812 | TCTGATCCATATTAATTGACGCACAG | 59.575 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
2640 | 5049 | 9.606631 | GTTAGATGAAAATGACATACTCCTTCT | 57.393 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
2652 | 5061 | 7.077605 | CAGCGAAAGTTGTTAGATGAAAATGA | 58.922 | 34.615 | 0.00 | 0.00 | 37.56 | 2.57 |
2658 | 5067 | 4.265904 | TCCAGCGAAAGTTGTTAGATGA | 57.734 | 40.909 | 0.00 | 0.00 | 41.08 | 2.92 |
2659 | 5068 | 5.356882 | TTTCCAGCGAAAGTTGTTAGATG | 57.643 | 39.130 | 0.00 | 0.00 | 41.08 | 2.90 |
2660 | 5069 | 6.575162 | AATTTCCAGCGAAAGTTGTTAGAT | 57.425 | 33.333 | 0.00 | 0.00 | 41.22 | 1.98 |
2675 | 5084 | 3.997021 | AGCACTGTACGAGAAATTTCCAG | 59.003 | 43.478 | 14.61 | 15.21 | 0.00 | 3.86 |
2684 | 5093 | 3.462483 | TTGGAAAAGCACTGTACGAGA | 57.538 | 42.857 | 0.00 | 0.00 | 0.00 | 4.04 |
2685 | 5094 | 3.607078 | GCTTTGGAAAAGCACTGTACGAG | 60.607 | 47.826 | 17.52 | 0.00 | 42.56 | 4.18 |
3163 | 5572 | 3.191791 | GTGTACAACCACCTCTCTCTCTC | 59.808 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
3164 | 5573 | 3.158676 | GTGTACAACCACCTCTCTCTCT | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3165 | 5574 | 2.891580 | TGTGTACAACCACCTCTCTCTC | 59.108 | 50.000 | 0.00 | 0.00 | 34.35 | 3.20 |
3166 | 5575 | 2.958818 | TGTGTACAACCACCTCTCTCT | 58.041 | 47.619 | 0.00 | 0.00 | 34.35 | 3.10 |
3167 | 5576 | 3.746045 | TTGTGTACAACCACCTCTCTC | 57.254 | 47.619 | 0.00 | 0.00 | 34.35 | 3.20 |
3168 | 5577 | 3.454812 | AGTTTGTGTACAACCACCTCTCT | 59.545 | 43.478 | 0.00 | 0.00 | 35.28 | 3.10 |
3169 | 5578 | 3.560068 | CAGTTTGTGTACAACCACCTCTC | 59.440 | 47.826 | 0.00 | 0.00 | 35.28 | 3.20 |
3170 | 5579 | 3.054655 | ACAGTTTGTGTACAACCACCTCT | 60.055 | 43.478 | 0.00 | 0.00 | 37.75 | 3.69 |
3171 | 5580 | 3.275999 | ACAGTTTGTGTACAACCACCTC | 58.724 | 45.455 | 0.00 | 0.00 | 37.75 | 3.85 |
3172 | 5581 | 3.275999 | GACAGTTTGTGTACAACCACCT | 58.724 | 45.455 | 0.00 | 0.00 | 40.56 | 4.00 |
3173 | 5582 | 3.011119 | TGACAGTTTGTGTACAACCACC | 58.989 | 45.455 | 0.00 | 0.00 | 40.56 | 4.61 |
3174 | 5583 | 4.688511 | TTGACAGTTTGTGTACAACCAC | 57.311 | 40.909 | 0.00 | 0.00 | 40.56 | 4.16 |
3175 | 5584 | 4.944317 | TCATTGACAGTTTGTGTACAACCA | 59.056 | 37.500 | 0.00 | 0.00 | 40.56 | 3.67 |
3176 | 5585 | 5.493133 | TCATTGACAGTTTGTGTACAACC | 57.507 | 39.130 | 0.00 | 0.00 | 40.56 | 3.77 |
3177 | 5586 | 6.318628 | TGTTCATTGACAGTTTGTGTACAAC | 58.681 | 36.000 | 0.00 | 0.00 | 40.56 | 3.32 |
3178 | 5587 | 6.502136 | TGTTCATTGACAGTTTGTGTACAA | 57.498 | 33.333 | 0.00 | 0.00 | 40.56 | 2.41 |
3179 | 5588 | 6.502136 | TTGTTCATTGACAGTTTGTGTACA | 57.498 | 33.333 | 0.00 | 0.00 | 40.56 | 2.90 |
3180 | 5589 | 7.985634 | AATTGTTCATTGACAGTTTGTGTAC | 57.014 | 32.000 | 0.00 | 0.00 | 40.56 | 2.90 |
3181 | 5590 | 8.898761 | AGTAATTGTTCATTGACAGTTTGTGTA | 58.101 | 29.630 | 0.00 | 0.00 | 40.56 | 2.90 |
3182 | 5591 | 7.771183 | AGTAATTGTTCATTGACAGTTTGTGT | 58.229 | 30.769 | 0.00 | 0.00 | 44.49 | 3.72 |
3183 | 5592 | 9.729023 | TTAGTAATTGTTCATTGACAGTTTGTG | 57.271 | 29.630 | 0.00 | 0.00 | 32.63 | 3.33 |
3184 | 5593 | 9.730420 | GTTAGTAATTGTTCATTGACAGTTTGT | 57.270 | 29.630 | 0.00 | 0.00 | 32.63 | 2.83 |
3185 | 5594 | 9.729023 | TGTTAGTAATTGTTCATTGACAGTTTG | 57.271 | 29.630 | 0.00 | 0.00 | 32.63 | 2.93 |
3187 | 5596 | 9.950680 | CTTGTTAGTAATTGTTCATTGACAGTT | 57.049 | 29.630 | 0.00 | 0.00 | 34.44 | 3.16 |
3188 | 5597 | 9.120538 | ACTTGTTAGTAATTGTTCATTGACAGT | 57.879 | 29.630 | 0.00 | 0.00 | 31.21 | 3.55 |
3189 | 5598 | 9.385902 | CACTTGTTAGTAATTGTTCATTGACAG | 57.614 | 33.333 | 0.00 | 0.00 | 31.96 | 3.51 |
3190 | 5599 | 8.349245 | CCACTTGTTAGTAATTGTTCATTGACA | 58.651 | 33.333 | 0.00 | 0.00 | 31.96 | 3.58 |
3191 | 5600 | 7.326063 | GCCACTTGTTAGTAATTGTTCATTGAC | 59.674 | 37.037 | 0.00 | 0.00 | 31.96 | 3.18 |
3192 | 5601 | 7.013750 | TGCCACTTGTTAGTAATTGTTCATTGA | 59.986 | 33.333 | 0.00 | 0.00 | 31.96 | 2.57 |
3193 | 5602 | 7.114811 | GTGCCACTTGTTAGTAATTGTTCATTG | 59.885 | 37.037 | 0.00 | 0.00 | 31.96 | 2.82 |
3194 | 5603 | 7.145323 | GTGCCACTTGTTAGTAATTGTTCATT | 58.855 | 34.615 | 0.00 | 0.00 | 31.96 | 2.57 |
3195 | 5604 | 6.264292 | TGTGCCACTTGTTAGTAATTGTTCAT | 59.736 | 34.615 | 0.00 | 0.00 | 31.96 | 2.57 |
3196 | 5605 | 5.590663 | TGTGCCACTTGTTAGTAATTGTTCA | 59.409 | 36.000 | 0.00 | 0.00 | 31.96 | 3.18 |
3197 | 5606 | 6.067263 | TGTGCCACTTGTTAGTAATTGTTC | 57.933 | 37.500 | 0.00 | 0.00 | 31.96 | 3.18 |
3198 | 5607 | 6.458232 | TTGTGCCACTTGTTAGTAATTGTT | 57.542 | 33.333 | 0.00 | 0.00 | 31.96 | 2.83 |
3199 | 5608 | 6.458232 | TTTGTGCCACTTGTTAGTAATTGT | 57.542 | 33.333 | 0.00 | 0.00 | 31.96 | 2.71 |
3200 | 5609 | 7.867403 | AGAATTTGTGCCACTTGTTAGTAATTG | 59.133 | 33.333 | 0.00 | 0.00 | 31.96 | 2.32 |
3201 | 5610 | 7.951591 | AGAATTTGTGCCACTTGTTAGTAATT | 58.048 | 30.769 | 0.00 | 0.00 | 31.96 | 1.40 |
3202 | 5611 | 7.524717 | AGAATTTGTGCCACTTGTTAGTAAT | 57.475 | 32.000 | 0.00 | 0.00 | 31.96 | 1.89 |
3203 | 5612 | 6.952773 | AGAATTTGTGCCACTTGTTAGTAA | 57.047 | 33.333 | 0.00 | 0.00 | 31.96 | 2.24 |
3204 | 5613 | 8.453238 | TTTAGAATTTGTGCCACTTGTTAGTA | 57.547 | 30.769 | 0.00 | 0.00 | 31.96 | 1.82 |
3205 | 5614 | 6.952773 | TTAGAATTTGTGCCACTTGTTAGT | 57.047 | 33.333 | 0.00 | 0.00 | 34.00 | 2.24 |
3206 | 5615 | 6.363357 | GCTTTAGAATTTGTGCCACTTGTTAG | 59.637 | 38.462 | 0.00 | 0.00 | 0.00 | 2.34 |
3207 | 5616 | 6.212955 | GCTTTAGAATTTGTGCCACTTGTTA | 58.787 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3208 | 5617 | 5.049828 | GCTTTAGAATTTGTGCCACTTGTT | 58.950 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
3209 | 5618 | 4.620982 | GCTTTAGAATTTGTGCCACTTGT | 58.379 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
3210 | 5619 | 3.670055 | CGCTTTAGAATTTGTGCCACTTG | 59.330 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3211 | 5620 | 3.857010 | GCGCTTTAGAATTTGTGCCACTT | 60.857 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3212 | 5621 | 2.351738 | GCGCTTTAGAATTTGTGCCACT | 60.352 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3213 | 5622 | 1.985684 | GCGCTTTAGAATTTGTGCCAC | 59.014 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
3214 | 5623 | 1.611006 | TGCGCTTTAGAATTTGTGCCA | 59.389 | 42.857 | 9.73 | 0.00 | 35.36 | 4.92 |
3215 | 5624 | 2.346099 | TGCGCTTTAGAATTTGTGCC | 57.654 | 45.000 | 9.73 | 0.00 | 35.36 | 5.01 |
3216 | 5625 | 3.120121 | CAGTTGCGCTTTAGAATTTGTGC | 59.880 | 43.478 | 9.73 | 0.00 | 36.59 | 4.57 |
3217 | 5626 | 3.120121 | GCAGTTGCGCTTTAGAATTTGTG | 59.880 | 43.478 | 9.73 | 0.00 | 0.00 | 3.33 |
3218 | 5627 | 3.308530 | GCAGTTGCGCTTTAGAATTTGT | 58.691 | 40.909 | 9.73 | 0.00 | 0.00 | 2.83 |
3219 | 5628 | 3.605486 | GAGCAGTTGCGCTTTAGAATTTG | 59.395 | 43.478 | 9.73 | 0.00 | 44.01 | 2.32 |
3220 | 5629 | 3.826466 | GAGCAGTTGCGCTTTAGAATTT | 58.174 | 40.909 | 9.73 | 0.00 | 44.01 | 1.82 |
3221 | 5630 | 3.477899 | GAGCAGTTGCGCTTTAGAATT | 57.522 | 42.857 | 9.73 | 0.00 | 44.01 | 2.17 |
3277 | 5686 | 7.605691 | TGACATGTGTTTTTCCTGAAATTTTGT | 59.394 | 29.630 | 1.15 | 0.00 | 0.00 | 2.83 |
3352 | 6359 | 3.181486 | TGCGCTAAGAAGTGATCACCTAG | 60.181 | 47.826 | 22.21 | 16.94 | 35.06 | 3.02 |
3354 | 6361 | 1.550524 | TGCGCTAAGAAGTGATCACCT | 59.449 | 47.619 | 22.21 | 9.80 | 35.06 | 4.00 |
3770 | 6777 | 4.941263 | TGGACATCAGGGATTTTTAACGAG | 59.059 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
3784 | 6791 | 8.747034 | GGCTATTGGGCTATACTGGACATCAG | 62.747 | 50.000 | 0.00 | 0.00 | 42.08 | 2.90 |
3785 | 6792 | 4.020218 | GCTATTGGGCTATACTGGACATCA | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 3.07 |
3786 | 6793 | 4.508662 | GCTATTGGGCTATACTGGACATC | 58.491 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
3787 | 6794 | 3.264450 | GGCTATTGGGCTATACTGGACAT | 59.736 | 47.826 | 0.00 | 0.00 | 37.53 | 3.06 |
3788 | 6795 | 2.637872 | GGCTATTGGGCTATACTGGACA | 59.362 | 50.000 | 0.00 | 0.00 | 37.53 | 4.02 |
3789 | 6796 | 2.027100 | GGGCTATTGGGCTATACTGGAC | 60.027 | 54.545 | 0.00 | 0.00 | 40.65 | 4.02 |
3790 | 6797 | 2.266279 | GGGCTATTGGGCTATACTGGA | 58.734 | 52.381 | 0.00 | 0.00 | 40.65 | 3.86 |
3792 | 6799 | 4.307032 | AATGGGCTATTGGGCTATACTG | 57.693 | 45.455 | 0.00 | 0.00 | 40.55 | 2.74 |
3793 | 6800 | 5.101529 | ACTAATGGGCTATTGGGCTATACT | 58.898 | 41.667 | 11.41 | 0.00 | 40.55 | 2.12 |
3794 | 6801 | 5.429130 | GACTAATGGGCTATTGGGCTATAC | 58.571 | 45.833 | 11.41 | 0.00 | 40.55 | 1.47 |
3864 | 6878 | 1.528542 | CGAGTGATCCCTCCCGCTA | 60.529 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
3867 | 6881 | 3.917760 | GGCGAGTGATCCCTCCCG | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
3869 | 6883 | 4.593864 | GCGGCGAGTGATCCCTCC | 62.594 | 72.222 | 12.98 | 0.00 | 0.00 | 4.30 |
3870 | 6884 | 4.593864 | GGCGGCGAGTGATCCCTC | 62.594 | 72.222 | 12.98 | 0.00 | 0.00 | 4.30 |
3901 | 6915 | 2.491022 | GGGGGATGAGAGGACGACG | 61.491 | 68.421 | 0.00 | 0.00 | 0.00 | 5.12 |
3905 | 6919 | 2.491022 | CGACGGGGGATGAGAGGAC | 61.491 | 68.421 | 0.00 | 0.00 | 0.00 | 3.85 |
3909 | 6923 | 0.613853 | AAAGACGACGGGGGATGAGA | 60.614 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3910 | 6924 | 1.108776 | TAAAGACGACGGGGGATGAG | 58.891 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3911 | 6925 | 1.684983 | GATAAAGACGACGGGGGATGA | 59.315 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
3912 | 6926 | 1.411246 | TGATAAAGACGACGGGGGATG | 59.589 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3913 | 6927 | 1.784358 | TGATAAAGACGACGGGGGAT | 58.216 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3928 | 6942 | 5.416013 | GTGTCCATCGGTCTATCAGATGATA | 59.584 | 44.000 | 6.27 | 2.71 | 46.47 | 2.15 |
3930 | 6944 | 3.570125 | GTGTCCATCGGTCTATCAGATGA | 59.430 | 47.826 | 6.27 | 0.00 | 46.47 | 2.92 |
3939 | 6953 | 2.747177 | TCTATTGGTGTCCATCGGTCT | 58.253 | 47.619 | 0.00 | 0.00 | 31.53 | 3.85 |
3942 | 6956 | 3.377172 | GGTTTTCTATTGGTGTCCATCGG | 59.623 | 47.826 | 0.00 | 0.00 | 31.53 | 4.18 |
3955 | 6969 | 1.670811 | CATCGCGGCAAGGTTTTCTAT | 59.329 | 47.619 | 6.13 | 0.00 | 0.00 | 1.98 |
3991 | 7014 | 2.089201 | GGACGAAATCGGAATGGGTTT | 58.911 | 47.619 | 7.81 | 0.00 | 44.95 | 3.27 |
4027 | 7055 | 0.036875 | AACAGGGCCAAGCAGAGTAC | 59.963 | 55.000 | 6.18 | 0.00 | 0.00 | 2.73 |
4029 | 7057 | 1.073897 | GAACAGGGCCAAGCAGAGT | 59.926 | 57.895 | 6.18 | 0.00 | 0.00 | 3.24 |
4099 | 7127 | 0.857311 | GCATCGCGGACATTGAAACG | 60.857 | 55.000 | 6.13 | 0.00 | 0.00 | 3.60 |
4266 | 7327 | 1.153823 | CGACGCTGAACCGAGGAAT | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
4275 | 7336 | 1.729484 | CTCGTTGAGCGACGCTGAA | 60.729 | 57.895 | 29.85 | 23.58 | 45.68 | 3.02 |
4339 | 7400 | 1.064296 | CGAAGGACGTCTGCGCTAT | 59.936 | 57.895 | 16.46 | 0.00 | 37.77 | 2.97 |
4397 | 7458 | 4.124351 | CGGTGGCCGCGAACTCTA | 62.124 | 66.667 | 8.23 | 0.00 | 41.17 | 2.43 |
4752 | 7821 | 3.437795 | GCATCAGCTTGCCGCAGT | 61.438 | 61.111 | 0.00 | 0.00 | 42.61 | 4.40 |
4754 | 7823 | 2.274232 | GAATGCATCAGCTTGCCGCA | 62.274 | 55.000 | 7.90 | 3.78 | 42.06 | 5.69 |
4868 | 7937 | 1.375326 | GGAACCTTCTTCACCGGCT | 59.625 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
4876 | 7945 | 3.167414 | CCCCACCGGAACCTTCTT | 58.833 | 61.111 | 9.46 | 0.00 | 0.00 | 2.52 |
4947 | 8048 | 2.554344 | GGTGACACCAAGCTTTCCCATA | 60.554 | 50.000 | 20.14 | 0.00 | 38.42 | 2.74 |
4982 | 8084 | 2.351244 | ATGCCTGAGAAGTCGCCGA | 61.351 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
5022 | 8124 | 1.690633 | GGAGATGGAGACCTGCCCA | 60.691 | 63.158 | 0.00 | 0.00 | 36.79 | 5.36 |
5025 | 8127 | 1.743321 | CTCGGGAGATGGAGACCTGC | 61.743 | 65.000 | 0.00 | 0.00 | 38.80 | 4.85 |
5026 | 8128 | 0.396417 | ACTCGGGAGATGGAGACCTG | 60.396 | 60.000 | 2.08 | 0.00 | 38.80 | 4.00 |
5059 | 8161 | 2.105128 | CTCGTCCACCTCGATGGC | 59.895 | 66.667 | 0.00 | 0.00 | 39.85 | 4.40 |
5128 | 8268 | 2.100087 | GCGGTGGTTCCTTTTTCTCAAA | 59.900 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
5138 | 8278 | 4.095590 | CCAAATGCGGTGGTTCCT | 57.904 | 55.556 | 0.00 | 0.00 | 0.00 | 3.36 |
5157 | 8297 | 1.376609 | GCCGATCCGCCACAAAATCT | 61.377 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5554 | 8694 | 0.829182 | AGGCTCCCTTTTGCTTGTGG | 60.829 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
5666 | 8828 | 0.323178 | ATGGGAGCTCTGCACCTTTG | 60.323 | 55.000 | 14.64 | 0.00 | 39.22 | 2.77 |
5808 | 8970 | 6.709643 | CAGGATTCGTCTTGATACATGTTTC | 58.290 | 40.000 | 2.30 | 6.49 | 0.00 | 2.78 |
5979 | 9783 | 9.685276 | ATGATGTGGAATTCATAACAAGACTTA | 57.315 | 29.630 | 7.93 | 0.00 | 30.93 | 2.24 |
5990 | 9794 | 8.472413 | CAGTAAGGAAAATGATGTGGAATTCAT | 58.528 | 33.333 | 7.93 | 0.00 | 34.08 | 2.57 |
6002 | 9806 | 7.558161 | CATGTATGCTCAGTAAGGAAAATGA | 57.442 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6072 | 9876 | 5.259632 | CACCCTTGATTTTGAGAAGGATCT | 58.740 | 41.667 | 0.00 | 0.00 | 38.93 | 2.75 |
6073 | 9877 | 4.142293 | GCACCCTTGATTTTGAGAAGGATC | 60.142 | 45.833 | 0.00 | 0.00 | 38.93 | 3.36 |
6074 | 9878 | 3.766051 | GCACCCTTGATTTTGAGAAGGAT | 59.234 | 43.478 | 0.00 | 0.00 | 38.93 | 3.24 |
6091 | 9895 | 0.603975 | GTTGACTGGACTCTGCACCC | 60.604 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6129 | 9934 | 9.116067 | GTATCAGTCTGTCTCTCAATTAGTAGT | 57.884 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
6178 | 10004 | 5.247110 | ACAGAGTAAGATGGCAGAAAGAAGA | 59.753 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.