Multiple sequence alignment - TraesCS6D01G047200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G047200 chr6D 100.000 4367 0 0 1 4367 21903203 21907569 0.000000e+00 8065.0
1 TraesCS6D01G047200 chr6D 79.586 1014 160 26 1091 2073 21914735 21913738 0.000000e+00 682.0
2 TraesCS6D01G047200 chr6D 79.175 970 128 38 1602 2511 21052945 21053900 4.830000e-169 604.0
3 TraesCS6D01G047200 chr6D 83.607 671 67 24 2515 3178 21053936 21054570 1.350000e-164 590.0
4 TraesCS6D01G047200 chr6D 93.197 294 20 0 1 294 54233066 54232773 2.410000e-117 433.0
5 TraesCS6D01G047200 chr6D 80.182 550 100 7 987 1533 21050323 21050866 1.890000e-108 403.0
6 TraesCS6D01G047200 chr6D 79.760 583 90 17 999 1557 21700413 21700991 8.800000e-107 398.0
7 TraesCS6D01G047200 chr6D 78.746 654 81 27 1597 2210 21701060 21701695 6.850000e-103 385.0
8 TraesCS6D01G047200 chr6D 86.804 341 38 6 2732 3067 20965507 20965169 1.480000e-99 374.0
9 TraesCS6D01G047200 chr6D 73.802 939 198 32 1124 2032 34577645 34578565 1.170000e-85 327.0
10 TraesCS6D01G047200 chr6D 76.274 687 95 40 2514 3176 21701994 21702636 1.970000e-78 303.0
11 TraesCS6D01G047200 chr6D 81.915 282 31 14 2515 2789 21890465 21890733 2.040000e-53 220.0
12 TraesCS6D01G047200 chr6D 92.308 130 6 3 4051 4177 21056047 21056175 9.650000e-42 182.0
13 TraesCS6D01G047200 chr6D 96.078 51 2 0 3890 3940 21056338 21056388 2.800000e-12 84.2
14 TraesCS6D01G047200 chr6B 92.876 1488 73 4 834 2305 36137427 36138897 0.000000e+00 2130.0
15 TraesCS6D01G047200 chr6B 93.973 1261 51 12 2463 3711 36141636 36142883 0.000000e+00 1884.0
16 TraesCS6D01G047200 chr6B 80.288 1319 198 37 965 2237 36039015 36040317 0.000000e+00 939.0
17 TraesCS6D01G047200 chr6B 77.606 1295 215 39 987 2230 36176057 36177327 0.000000e+00 715.0
18 TraesCS6D01G047200 chr6B 79.276 1105 164 34 1146 2210 36131651 36132730 0.000000e+00 712.0
19 TraesCS6D01G047200 chr6B 92.757 497 17 6 297 789 36136630 36137111 0.000000e+00 701.0
20 TraesCS6D01G047200 chr6B 85.547 685 65 18 2515 3178 36040746 36041417 0.000000e+00 686.0
21 TraesCS6D01G047200 chr6B 79.596 495 69 25 2515 2998 36133034 36133507 4.210000e-85 326.0
22 TraesCS6D01G047200 chr6B 73.326 941 195 37 1117 2038 29264472 29263569 3.300000e-76 296.0
23 TraesCS6D01G047200 chr6B 93.388 121 8 0 3886 4006 36143067 36143187 3.470000e-41 180.0
24 TraesCS6D01G047200 chr6B 95.455 110 5 0 4051 4160 36143295 36143404 4.490000e-40 176.0
25 TraesCS6D01G047200 chr6B 77.880 217 31 15 1087 1298 35588620 35588824 7.670000e-23 119.0
26 TraesCS6D01G047200 chr6B 74.046 393 57 27 1885 2238 35939966 35940352 7.670000e-23 119.0
27 TraesCS6D01G047200 chr6B 86.239 109 10 2 2303 2406 36138993 36139101 3.570000e-21 113.0
28 TraesCS6D01G047200 chr6B 98.148 54 1 0 4186 4239 36143403 36143456 1.290000e-15 95.3
29 TraesCS6D01G047200 chr6B 96.875 32 1 0 3903 3934 36043049 36043080 2.000000e-03 54.7
30 TraesCS6D01G047200 chr6A 80.943 1569 201 48 1013 2503 21320941 21322489 0.000000e+00 1151.0
31 TraesCS6D01G047200 chr6A 79.673 1225 152 47 1357 2503 21315889 21317094 0.000000e+00 793.0
32 TraesCS6D01G047200 chr6A 79.673 1225 152 47 1357 2503 21327530 21328735 0.000000e+00 793.0
33 TraesCS6D01G047200 chr6A 84.526 685 71 20 2515 3178 21317146 21317816 0.000000e+00 645.0
34 TraesCS6D01G047200 chr6A 84.526 685 71 20 2515 3178 21322541 21323211 0.000000e+00 645.0
35 TraesCS6D01G047200 chr6A 84.526 685 71 20 2515 3178 21328787 21329457 0.000000e+00 645.0
36 TraesCS6D01G047200 chr6A 82.005 439 73 4 1091 1526 21306386 21306821 6.900000e-98 368.0
37 TraesCS6D01G047200 chr6A 75.347 649 131 16 1131 1763 21505225 21505860 7.150000e-73 285.0
38 TraesCS6D01G047200 chr6A 85.944 249 20 10 304 541 21309081 21309325 7.250000e-63 252.0
39 TraesCS6D01G047200 chr6A 76.762 383 71 13 1662 2032 17380354 17379978 9.580000e-47 198.0
40 TraesCS6D01G047200 chr6A 75.630 357 77 6 1678 2032 38865557 38865905 7.510000e-38 169.0
41 TraesCS6D01G047200 chr6A 94.828 58 3 0 2161 2218 21307495 21307552 1.670000e-14 91.6
42 TraesCS6D01G047200 chr6A 77.987 159 23 7 2092 2238 21233115 21233273 6.020000e-14 89.8
43 TraesCS6D01G047200 chr6A 89.706 68 4 2 2161 2225 19885654 19885587 2.800000e-12 84.2
44 TraesCS6D01G047200 chr3B 93.537 294 19 0 1 294 203704513 203704806 5.190000e-119 438.0
45 TraesCS6D01G047200 chr4D 92.715 302 20 2 1 301 446655000 446654700 6.710000e-118 435.0
46 TraesCS6D01G047200 chr4D 93.197 294 20 0 1 294 19148675 19148382 2.410000e-117 433.0
47 TraesCS6D01G047200 chr4D 93.220 295 19 1 1 294 473144100 473144394 2.410000e-117 433.0
48 TraesCS6D01G047200 chr4D 100.000 45 0 0 789 833 411562039 411561995 2.800000e-12 84.2
49 TraesCS6D01G047200 chr4D 100.000 45 0 0 789 833 411563269 411563313 2.800000e-12 84.2
50 TraesCS6D01G047200 chr4D 97.778 45 1 0 789 833 333469169 333469213 1.300000e-10 78.7
51 TraesCS6D01G047200 chr7D 92.691 301 21 1 1 300 550996162 550996462 2.410000e-117 433.0
52 TraesCS6D01G047200 chr7D 92.453 53 4 0 1484 1536 609412295 609412243 4.680000e-10 76.8
53 TraesCS6D01G047200 chr4B 92.333 300 23 0 1 300 588749148 588749447 1.120000e-115 427.0
54 TraesCS6D01G047200 chr1D 92.593 297 19 2 1 295 364059619 364059914 1.450000e-114 424.0
55 TraesCS6D01G047200 chr1A 92.542 295 22 0 1 295 557420983 557421277 1.450000e-114 424.0
56 TraesCS6D01G047200 chr1A 97.778 45 1 0 789 833 319890472 319890516 1.300000e-10 78.7
57 TraesCS6D01G047200 chr2A 83.815 346 52 4 1121 1462 758526620 758526275 4.210000e-85 326.0
58 TraesCS6D01G047200 chr2B 83.526 346 53 4 1121 1462 771160315 771159970 1.960000e-83 320.0
59 TraesCS6D01G047200 chr2B 92.308 52 4 0 789 840 594023408 594023459 1.680000e-09 75.0
60 TraesCS6D01G047200 chr2D 78.537 410 73 10 1086 1484 56193025 56193430 5.600000e-64 255.0
61 TraesCS6D01G047200 chr2D 100.000 45 0 0 789 833 542064992 542064948 2.800000e-12 84.2
62 TraesCS6D01G047200 chr2D 100.000 45 0 0 789 833 542066216 542066260 2.800000e-12 84.2
63 TraesCS6D01G047200 chr7B 73.664 262 64 3 1138 1398 696191948 696191691 3.590000e-16 97.1
64 TraesCS6D01G047200 chr5D 97.778 45 1 0 789 833 257593563 257593607 1.300000e-10 78.7
65 TraesCS6D01G047200 chr5D 97.778 45 1 0 789 833 268276387 268276431 1.300000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G047200 chr6D 21903203 21907569 4366 False 8065.000000 8065 100.000000 1 4367 1 chr6D.!!$F2 4366
1 TraesCS6D01G047200 chr6D 21913738 21914735 997 True 682.000000 682 79.586000 1091 2073 1 chr6D.!!$R2 982
2 TraesCS6D01G047200 chr6D 21050323 21056388 6065 False 372.640000 604 86.270000 987 4177 5 chr6D.!!$F4 3190
3 TraesCS6D01G047200 chr6D 21700413 21702636 2223 False 362.000000 398 78.260000 999 3176 3 chr6D.!!$F5 2177
4 TraesCS6D01G047200 chr6D 34577645 34578565 920 False 327.000000 327 73.802000 1124 2032 1 chr6D.!!$F3 908
5 TraesCS6D01G047200 chr6B 36176057 36177327 1270 False 715.000000 715 77.606000 987 2230 1 chr6B.!!$F3 1243
6 TraesCS6D01G047200 chr6B 36131651 36143456 11805 False 701.922222 2130 90.189778 297 4239 9 chr6B.!!$F5 3942
7 TraesCS6D01G047200 chr6B 36039015 36043080 4065 False 559.900000 939 87.570000 965 3934 3 chr6B.!!$F4 2969
8 TraesCS6D01G047200 chr6B 29263569 29264472 903 True 296.000000 296 73.326000 1117 2038 1 chr6B.!!$R1 921
9 TraesCS6D01G047200 chr6A 21315889 21323211 7322 False 808.500000 1151 82.417000 1013 3178 4 chr6A.!!$F5 2165
10 TraesCS6D01G047200 chr6A 21327530 21329457 1927 False 719.000000 793 82.099500 1357 3178 2 chr6A.!!$F6 1821
11 TraesCS6D01G047200 chr6A 21505225 21505860 635 False 285.000000 285 75.347000 1131 1763 1 chr6A.!!$F2 632
12 TraesCS6D01G047200 chr6A 21306386 21309325 2939 False 237.200000 368 87.592333 304 2218 3 chr6A.!!$F4 1914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.098025 CAGTCAACCAAAACGCGTGT 59.902 50.0 14.98 3.14 0.0 4.49 F
949 5924 0.108472 TCTGCTCTGCTCACCAATCG 60.108 55.0 0.00 0.00 0.0 3.34 F
1403 6411 0.708802 TCCTTCTCCTTCCTACCCGT 59.291 55.0 0.00 0.00 0.0 5.28 F
3345 13460 0.889186 AGATGCTGGAAAAACGCCGT 60.889 50.0 0.00 0.00 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1027 6002 0.323908 CGAGGGTCCTCTCTGGTCTT 60.324 60.0 14.34 0.0 40.69 3.01 R
1912 9054 1.609208 AGCACAAACATCCCAGTGAC 58.391 50.0 0.00 0.0 33.99 3.67 R
3349 13464 0.107017 GGCTATGGGCTTGAGCTTGA 60.107 55.0 2.66 0.0 41.70 3.02 R
4280 15498 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.0 0.00 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.618968 TCTTCTCCCCCTTCCTCTGC 60.619 60.000 0.00 0.00 0.00 4.26
29 30 0.620121 CTTCTCCCCCTTCCTCTGCT 60.620 60.000 0.00 0.00 0.00 4.24
30 31 0.716591 TTCTCCCCCTTCCTCTGCTA 59.283 55.000 0.00 0.00 0.00 3.49
33 34 1.383803 CCCCCTTCCTCTGCTAGCT 60.384 63.158 17.23 0.00 0.00 3.32
35 36 0.398381 CCCCTTCCTCTGCTAGCTCT 60.398 60.000 17.23 0.00 0.00 4.09
36 37 1.494960 CCCTTCCTCTGCTAGCTCTT 58.505 55.000 17.23 0.00 0.00 2.85
37 38 2.672098 CCCTTCCTCTGCTAGCTCTTA 58.328 52.381 17.23 0.00 0.00 2.10
38 39 3.034635 CCCTTCCTCTGCTAGCTCTTAA 58.965 50.000 17.23 3.37 0.00 1.85
39 40 3.645687 CCCTTCCTCTGCTAGCTCTTAAT 59.354 47.826 17.23 0.00 0.00 1.40
41 42 4.262420 CCTTCCTCTGCTAGCTCTTAATCC 60.262 50.000 17.23 0.00 0.00 3.01
42 43 4.191804 TCCTCTGCTAGCTCTTAATCCT 57.808 45.455 17.23 0.00 0.00 3.24
43 44 3.894427 TCCTCTGCTAGCTCTTAATCCTG 59.106 47.826 17.23 0.00 0.00 3.86
44 45 3.640967 CCTCTGCTAGCTCTTAATCCTGT 59.359 47.826 17.23 0.00 0.00 4.00
45 46 4.501229 CCTCTGCTAGCTCTTAATCCTGTG 60.501 50.000 17.23 0.00 0.00 3.66
49 50 3.431486 GCTAGCTCTTAATCCTGTGTGCT 60.431 47.826 7.70 0.00 0.00 4.40
50 51 4.202161 GCTAGCTCTTAATCCTGTGTGCTA 60.202 45.833 7.70 0.00 0.00 3.49
51 52 4.826274 AGCTCTTAATCCTGTGTGCTAA 57.174 40.909 0.00 0.00 0.00 3.09
53 54 4.223923 AGCTCTTAATCCTGTGTGCTAAGT 59.776 41.667 0.00 0.00 0.00 2.24
66 67 1.731720 GCTAAGTGCAAGTGCTAGCT 58.268 50.000 17.23 0.00 38.50 3.32
69 70 1.972872 AAGTGCAAGTGCTAGCTGTT 58.027 45.000 17.23 6.29 42.66 3.16
70 71 2.839486 AGTGCAAGTGCTAGCTGTTA 57.161 45.000 17.23 0.00 42.66 2.41
71 72 3.126001 AGTGCAAGTGCTAGCTGTTAA 57.874 42.857 17.23 0.00 42.66 2.01
75 76 4.095483 GTGCAAGTGCTAGCTGTTAATCAT 59.905 41.667 17.23 0.00 42.66 2.45
76 77 5.294306 GTGCAAGTGCTAGCTGTTAATCATA 59.706 40.000 17.23 0.00 42.66 2.15
77 78 5.294306 TGCAAGTGCTAGCTGTTAATCATAC 59.706 40.000 17.23 1.12 42.66 2.39
79 80 5.878406 AGTGCTAGCTGTTAATCATACCT 57.122 39.130 17.23 0.00 0.00 3.08
81 82 5.363868 AGTGCTAGCTGTTAATCATACCTCA 59.636 40.000 17.23 0.00 0.00 3.86
82 83 6.042552 AGTGCTAGCTGTTAATCATACCTCAT 59.957 38.462 17.23 0.00 0.00 2.90
85 86 5.039920 AGCTGTTAATCATACCTCATGCA 57.960 39.130 0.00 0.00 34.35 3.96
90 91 6.413892 TGTTAATCATACCTCATGCAGTCAA 58.586 36.000 0.00 0.00 34.35 3.18
92 93 3.266510 TCATACCTCATGCAGTCAACC 57.733 47.619 0.00 0.00 34.35 3.77
93 94 2.571202 TCATACCTCATGCAGTCAACCA 59.429 45.455 0.00 0.00 34.35 3.67
94 95 3.008923 TCATACCTCATGCAGTCAACCAA 59.991 43.478 0.00 0.00 34.35 3.67
95 96 2.363306 ACCTCATGCAGTCAACCAAA 57.637 45.000 0.00 0.00 0.00 3.28
98 99 2.605338 CCTCATGCAGTCAACCAAAACG 60.605 50.000 0.00 0.00 0.00 3.60
102 103 1.199852 GCAGTCAACCAAAACGCGTG 61.200 55.000 14.98 1.65 0.00 5.34
103 104 0.098025 CAGTCAACCAAAACGCGTGT 59.902 50.000 14.98 3.14 0.00 4.49
104 105 1.328069 CAGTCAACCAAAACGCGTGTA 59.672 47.619 14.98 0.00 0.00 2.90
107 108 2.008329 TCAACCAAAACGCGTGTAGTT 58.992 42.857 14.98 12.46 0.00 2.24
108 109 2.105659 CAACCAAAACGCGTGTAGTTG 58.894 47.619 23.10 23.10 31.43 3.16
109 110 1.371595 ACCAAAACGCGTGTAGTTGT 58.628 45.000 14.98 2.72 31.43 3.32
110 111 2.548875 ACCAAAACGCGTGTAGTTGTA 58.451 42.857 14.98 0.00 31.43 2.41
111 112 3.132925 ACCAAAACGCGTGTAGTTGTAT 58.867 40.909 14.98 3.26 31.43 2.29
114 115 1.785768 AACGCGTGTAGTTGTATGCA 58.214 45.000 14.98 0.00 0.00 3.96
116 117 0.368907 CGCGTGTAGTTGTATGCACC 59.631 55.000 0.00 0.00 32.78 5.01
117 118 0.368907 GCGTGTAGTTGTATGCACCG 59.631 55.000 0.00 0.00 32.78 4.94
118 119 1.705256 CGTGTAGTTGTATGCACCGT 58.295 50.000 0.00 0.00 32.78 4.83
119 120 1.388768 CGTGTAGTTGTATGCACCGTG 59.611 52.381 0.00 0.00 32.78 4.94
120 121 2.679450 GTGTAGTTGTATGCACCGTGA 58.321 47.619 1.65 0.00 30.45 4.35
125 126 2.483877 AGTTGTATGCACCGTGACAATG 59.516 45.455 1.65 0.00 34.54 2.82
128 129 3.342909 TGCACCGTGACAATGCAG 58.657 55.556 6.65 0.00 44.17 4.41
131 132 2.112928 ACCGTGACAATGCAGGCA 59.887 55.556 0.00 0.00 0.00 4.75
132 133 1.528076 ACCGTGACAATGCAGGCAA 60.528 52.632 0.00 0.00 0.00 4.52
135 136 1.794151 CGTGACAATGCAGGCAACCA 61.794 55.000 0.00 0.00 37.17 3.67
136 137 0.388659 GTGACAATGCAGGCAACCAA 59.611 50.000 0.00 0.00 37.17 3.67
137 138 1.117994 TGACAATGCAGGCAACCAAA 58.882 45.000 0.00 0.00 37.17 3.28
139 140 0.829333 ACAATGCAGGCAACCAAACA 59.171 45.000 0.00 0.00 37.17 2.83
142 143 0.829333 ATGCAGGCAACCAAACAACA 59.171 45.000 0.00 0.00 37.17 3.33
143 144 0.829333 TGCAGGCAACCAAACAACAT 59.171 45.000 0.00 0.00 37.17 2.71
144 145 1.219646 GCAGGCAACCAAACAACATG 58.780 50.000 0.00 0.00 37.17 3.21
147 148 3.376218 GCAACCAAACAACATGCCA 57.624 47.368 0.00 0.00 0.00 4.92
148 149 1.661341 GCAACCAAACAACATGCCAA 58.339 45.000 0.00 0.00 0.00 4.52
150 151 2.031930 GCAACCAAACAACATGCCAAAG 59.968 45.455 0.00 0.00 0.00 2.77
151 152 3.269178 CAACCAAACAACATGCCAAAGT 58.731 40.909 0.00 0.00 0.00 2.66
152 153 3.625649 ACCAAACAACATGCCAAAGTT 57.374 38.095 0.00 0.00 0.00 2.66
154 155 3.055530 ACCAAACAACATGCCAAAGTTGA 60.056 39.130 17.00 0.00 46.01 3.18
155 156 4.128643 CCAAACAACATGCCAAAGTTGAT 58.871 39.130 17.00 5.61 46.01 2.57
156 157 4.211794 CCAAACAACATGCCAAAGTTGATC 59.788 41.667 17.00 0.00 46.01 2.92
158 159 2.299867 ACAACATGCCAAAGTTGATCCC 59.700 45.455 17.00 0.00 46.01 3.85
160 161 1.077663 ACATGCCAAAGTTGATCCCCT 59.922 47.619 0.00 0.00 0.00 4.79
162 163 3.245586 ACATGCCAAAGTTGATCCCCTAA 60.246 43.478 0.00 0.00 0.00 2.69
163 164 3.756082 TGCCAAAGTTGATCCCCTAAT 57.244 42.857 0.00 0.00 0.00 1.73
164 165 3.364549 TGCCAAAGTTGATCCCCTAATG 58.635 45.455 0.00 0.00 0.00 1.90
165 166 2.101415 GCCAAAGTTGATCCCCTAATGC 59.899 50.000 0.00 0.00 0.00 3.56
167 168 3.382546 CCAAAGTTGATCCCCTAATGCAG 59.617 47.826 0.00 0.00 0.00 4.41
168 169 3.303351 AAGTTGATCCCCTAATGCAGG 57.697 47.619 0.00 0.00 45.07 4.85
180 181 4.917887 CTAATGCAGGAAGTCGATATGC 57.082 45.455 0.00 0.00 37.40 3.14
182 183 2.229675 TGCAGGAAGTCGATATGCAG 57.770 50.000 8.32 0.00 41.65 4.41
183 184 1.202568 TGCAGGAAGTCGATATGCAGG 60.203 52.381 8.32 0.00 41.65 4.85
185 186 1.123077 AGGAAGTCGATATGCAGGCA 58.877 50.000 0.00 0.00 0.00 4.75
186 187 1.486310 AGGAAGTCGATATGCAGGCAA 59.514 47.619 0.00 0.00 0.00 4.52
187 188 1.599542 GGAAGTCGATATGCAGGCAAC 59.400 52.381 0.00 0.00 0.00 4.17
189 190 0.541392 AGTCGATATGCAGGCAACCA 59.459 50.000 0.00 0.00 37.17 3.67
190 191 1.065491 AGTCGATATGCAGGCAACCAA 60.065 47.619 0.00 0.00 37.17 3.67
191 192 1.742831 GTCGATATGCAGGCAACCAAA 59.257 47.619 0.00 0.00 37.17 3.28
193 194 1.472082 CGATATGCAGGCAACCAAACA 59.528 47.619 0.00 0.00 37.17 2.83
194 195 2.094803 CGATATGCAGGCAACCAAACAA 60.095 45.455 0.00 0.00 37.17 2.83
198 199 1.289276 GCAGGCAACCAAACAACTTG 58.711 50.000 0.00 0.00 34.52 3.16
200 201 0.901124 AGGCAACCAAACAACTTGCA 59.099 45.000 4.18 0.00 41.77 4.08
201 202 1.134729 AGGCAACCAAACAACTTGCAG 60.135 47.619 4.18 0.00 41.77 4.41
204 205 2.540931 GCAACCAAACAACTTGCAGATG 59.459 45.455 0.00 0.00 40.09 2.90
207 208 2.033299 ACCAAACAACTTGCAGATGTCG 59.967 45.455 2.18 0.00 29.45 4.35
208 209 2.046313 CAAACAACTTGCAGATGTCGC 58.954 47.619 2.18 0.00 29.45 5.19
209 210 1.308047 AACAACTTGCAGATGTCGCA 58.692 45.000 2.18 0.00 37.68 5.10
210 211 1.527034 ACAACTTGCAGATGTCGCAT 58.473 45.000 0.00 0.00 39.58 4.73
211 212 2.698803 ACAACTTGCAGATGTCGCATA 58.301 42.857 0.00 0.00 39.58 3.14
212 213 3.273434 ACAACTTGCAGATGTCGCATAT 58.727 40.909 0.00 0.00 39.58 1.78
213 214 3.064408 ACAACTTGCAGATGTCGCATATG 59.936 43.478 0.00 0.00 39.58 1.78
216 217 2.159327 TGCAGATGTCGCATATGAGG 57.841 50.000 6.97 0.00 33.55 3.86
218 219 1.607509 GCAGATGTCGCATATGAGGCT 60.608 52.381 12.39 0.00 0.00 4.58
219 220 2.067013 CAGATGTCGCATATGAGGCTG 58.933 52.381 12.39 8.38 0.00 4.85
220 221 1.690893 AGATGTCGCATATGAGGCTGT 59.309 47.619 12.39 1.22 0.00 4.40
221 222 2.103771 AGATGTCGCATATGAGGCTGTT 59.896 45.455 12.39 0.00 0.00 3.16
222 223 2.401583 TGTCGCATATGAGGCTGTTT 57.598 45.000 12.39 0.00 0.00 2.83
223 224 2.710377 TGTCGCATATGAGGCTGTTTT 58.290 42.857 12.39 0.00 0.00 2.43
224 225 3.081061 TGTCGCATATGAGGCTGTTTTT 58.919 40.909 12.39 0.00 0.00 1.94
241 242 3.662759 TTTTTCAGAGTCAGGTTGGGT 57.337 42.857 0.00 0.00 0.00 4.51
243 244 2.638480 TTCAGAGTCAGGTTGGGTTG 57.362 50.000 0.00 0.00 0.00 3.77
244 245 1.801242 TCAGAGTCAGGTTGGGTTGA 58.199 50.000 0.00 0.00 0.00 3.18
245 246 1.694150 TCAGAGTCAGGTTGGGTTGAG 59.306 52.381 0.00 0.00 0.00 3.02
246 247 1.694150 CAGAGTCAGGTTGGGTTGAGA 59.306 52.381 0.00 0.00 0.00 3.27
247 248 2.304180 CAGAGTCAGGTTGGGTTGAGAT 59.696 50.000 0.00 0.00 0.00 2.75
248 249 2.304180 AGAGTCAGGTTGGGTTGAGATG 59.696 50.000 0.00 0.00 0.00 2.90
251 252 1.774254 TCAGGTTGGGTTGAGATGTGT 59.226 47.619 0.00 0.00 0.00 3.72
252 253 2.976185 TCAGGTTGGGTTGAGATGTGTA 59.024 45.455 0.00 0.00 0.00 2.90
253 254 3.587061 TCAGGTTGGGTTGAGATGTGTAT 59.413 43.478 0.00 0.00 0.00 2.29
254 255 3.691118 CAGGTTGGGTTGAGATGTGTATG 59.309 47.826 0.00 0.00 0.00 2.39
256 257 3.081061 GTTGGGTTGAGATGTGTATGCA 58.919 45.455 0.00 0.00 0.00 3.96
259 260 2.095853 GGGTTGAGATGTGTATGCAACG 59.904 50.000 0.00 0.00 39.63 4.10
264 265 4.789977 TGTGTATGCAACGCAGGT 57.210 50.000 10.05 0.00 43.60 4.00
265 266 3.917072 TGTGTATGCAACGCAGGTA 57.083 47.368 10.05 0.00 43.60 3.08
267 268 1.001520 TGTGTATGCAACGCAGGTACT 59.998 47.619 10.05 0.00 43.60 2.73
270 271 3.869246 GTGTATGCAACGCAGGTACTATT 59.131 43.478 0.00 0.00 43.65 1.73
273 274 2.343101 TGCAACGCAGGTACTATTCAC 58.657 47.619 0.00 0.00 36.02 3.18
274 275 2.028476 TGCAACGCAGGTACTATTCACT 60.028 45.455 0.00 0.00 36.02 3.41
276 277 3.550678 GCAACGCAGGTACTATTCACTAC 59.449 47.826 0.00 0.00 36.02 2.73
279 280 3.181489 ACGCAGGTACTATTCACTACAGC 60.181 47.826 0.00 0.00 36.02 4.40
280 281 3.181490 CGCAGGTACTATTCACTACAGCA 60.181 47.826 0.00 0.00 36.02 4.41
281 282 4.676986 CGCAGGTACTATTCACTACAGCAA 60.677 45.833 0.00 0.00 36.02 3.91
283 284 5.109903 CAGGTACTATTCACTACAGCAACC 58.890 45.833 0.00 0.00 36.02 3.77
284 285 4.775780 AGGTACTATTCACTACAGCAACCA 59.224 41.667 0.00 0.00 36.02 3.67
290 291 1.937223 TCACTACAGCAACCAAACACG 59.063 47.619 0.00 0.00 0.00 4.49
291 292 0.661020 ACTACAGCAACCAAACACGC 59.339 50.000 0.00 0.00 0.00 5.34
293 294 1.448922 TACAGCAACCAAACACGCCC 61.449 55.000 0.00 0.00 0.00 6.13
296 297 2.791868 GCAACCAAACACGCCCCTT 61.792 57.895 0.00 0.00 0.00 3.95
298 299 1.380650 AACCAAACACGCCCCTTGT 60.381 52.632 0.00 0.00 0.00 3.16
299 300 1.671901 AACCAAACACGCCCCTTGTG 61.672 55.000 0.00 0.00 42.99 3.33
300 301 2.027460 CAAACACGCCCCTTGTGC 59.973 61.111 0.00 0.00 41.03 4.57
473 5157 2.958355 AGTTGGTGGAATGGAGTTTGTG 59.042 45.455 0.00 0.00 0.00 3.33
478 5162 3.244770 GGTGGAATGGAGTTTGTGAGGTA 60.245 47.826 0.00 0.00 0.00 3.08
482 5166 3.594603 ATGGAGTTTGTGAGGTAGTCG 57.405 47.619 0.00 0.00 0.00 4.18
484 5168 1.617357 GGAGTTTGTGAGGTAGTCGGT 59.383 52.381 0.00 0.00 0.00 4.69
490 5174 3.928727 TGTGAGGTAGTCGGTGTTAAG 57.071 47.619 0.00 0.00 0.00 1.85
491 5175 2.559668 TGTGAGGTAGTCGGTGTTAAGG 59.440 50.000 0.00 0.00 0.00 2.69
517 5204 6.667414 AGATGACCAGGAGGATCTATTGATAC 59.333 42.308 0.00 0.00 38.69 2.24
622 5310 3.117888 GGAGATGAGATGCCAACCCTTTA 60.118 47.826 0.00 0.00 0.00 1.85
662 5350 8.165239 TGCTTACAATCATTGACAGTTTAACT 57.835 30.769 3.79 0.00 0.00 2.24
769 5457 4.885325 GGCCTTCCGGACTATTATTTTGAA 59.115 41.667 1.83 0.00 34.48 2.69
779 5467 9.139726 CGGACTATTATTTTGAACGATAAAACG 57.860 33.333 0.00 0.00 39.31 3.60
790 5478 8.947304 TTGAACGATAAAACGGTTAAATTACC 57.053 30.769 0.00 0.00 37.61 2.85
792 5480 8.229137 TGAACGATAAAACGGTTAAATTACCTG 58.771 33.333 0.00 0.00 35.97 4.00
793 5481 7.671495 ACGATAAAACGGTTAAATTACCTGT 57.329 32.000 0.00 0.00 35.97 4.00
794 5482 7.742151 ACGATAAAACGGTTAAATTACCTGTC 58.258 34.615 0.00 0.00 35.97 3.51
795 5483 6.896088 CGATAAAACGGTTAAATTACCTGTCG 59.104 38.462 0.00 0.00 35.97 4.35
796 5484 7.201427 CGATAAAACGGTTAAATTACCTGTCGA 60.201 37.037 0.00 0.00 35.97 4.20
797 5485 5.851047 AAACGGTTAAATTACCTGTCGAG 57.149 39.130 0.00 0.00 35.97 4.04
798 5486 4.525912 ACGGTTAAATTACCTGTCGAGT 57.474 40.909 0.00 0.00 35.97 4.18
799 5487 4.240096 ACGGTTAAATTACCTGTCGAGTG 58.760 43.478 0.00 0.00 35.97 3.51
801 5489 4.090930 CGGTTAAATTACCTGTCGAGTGTG 59.909 45.833 0.00 0.00 35.97 3.82
802 5490 5.232463 GGTTAAATTACCTGTCGAGTGTGA 58.768 41.667 0.00 0.00 35.23 3.58
803 5491 5.119743 GGTTAAATTACCTGTCGAGTGTGAC 59.880 44.000 0.00 0.00 39.37 3.67
804 5492 3.314541 AATTACCTGTCGAGTGTGACC 57.685 47.619 0.00 0.00 38.11 4.02
805 5493 0.963962 TTACCTGTCGAGTGTGACCC 59.036 55.000 0.00 0.00 38.11 4.46
806 5494 0.178984 TACCTGTCGAGTGTGACCCA 60.179 55.000 0.00 0.00 38.11 4.51
807 5495 1.046472 ACCTGTCGAGTGTGACCCAA 61.046 55.000 0.00 0.00 38.11 4.12
808 5496 0.600255 CCTGTCGAGTGTGACCCAAC 60.600 60.000 0.00 0.00 38.11 3.77
811 5499 1.611977 TGTCGAGTGTGACCCAACTAG 59.388 52.381 0.00 0.00 38.11 2.57
812 5500 1.067776 GTCGAGTGTGACCCAACTAGG 60.068 57.143 0.00 0.00 32.61 3.02
824 5512 3.094484 CCAACTAGGGGCATAAAACCA 57.906 47.619 0.00 0.00 0.00 3.67
825 5513 3.436243 CCAACTAGGGGCATAAAACCAA 58.564 45.455 0.00 0.00 0.00 3.67
826 5514 4.030216 CCAACTAGGGGCATAAAACCAAT 58.970 43.478 0.00 0.00 0.00 3.16
827 5515 4.469586 CCAACTAGGGGCATAAAACCAATT 59.530 41.667 0.00 0.00 0.00 2.32
830 5518 7.433680 CAACTAGGGGCATAAAACCAATTATC 58.566 38.462 0.00 0.00 0.00 1.75
831 5519 6.075315 ACTAGGGGCATAAAACCAATTATCC 58.925 40.000 0.00 0.00 0.00 2.59
832 5520 4.231273 AGGGGCATAAAACCAATTATCCC 58.769 43.478 0.00 0.00 34.84 3.85
868 5827 2.111251 GGAAGCCCCTCCGCATAC 59.889 66.667 0.00 0.00 0.00 2.39
875 5834 0.463833 CCCCTCCGCATACTCCAAAC 60.464 60.000 0.00 0.00 0.00 2.93
894 5853 1.080354 TGTAGCTACAGGTGCCCCT 59.920 57.895 22.67 0.00 44.02 4.79
901 5860 4.760047 CAGGTGCCCCTCGTTCCG 62.760 72.222 0.00 0.00 39.89 4.30
949 5924 0.108472 TCTGCTCTGCTCACCAATCG 60.108 55.000 0.00 0.00 0.00 3.34
965 5940 3.130340 CCAATCGAACCCACCAAAATAGG 59.870 47.826 0.00 0.00 0.00 2.57
966 5941 3.732048 ATCGAACCCACCAAAATAGGT 57.268 42.857 0.00 0.00 44.48 3.08
967 5942 3.512219 TCGAACCCACCAAAATAGGTT 57.488 42.857 0.00 0.00 45.18 3.50
969 5944 3.822167 TCGAACCCACCAAAATAGGTTTC 59.178 43.478 0.00 0.00 42.60 2.78
970 5945 3.057104 CGAACCCACCAAAATAGGTTTCC 60.057 47.826 0.00 0.00 42.60 3.13
971 5946 3.621682 ACCCACCAAAATAGGTTTCCA 57.378 42.857 0.00 0.00 40.77 3.53
972 5947 3.930035 ACCCACCAAAATAGGTTTCCAA 58.070 40.909 0.00 0.00 40.77 3.53
973 5948 3.901222 ACCCACCAAAATAGGTTTCCAAG 59.099 43.478 0.00 0.00 40.77 3.61
974 5949 3.306710 CCCACCAAAATAGGTTTCCAAGC 60.307 47.826 0.00 0.00 40.77 4.01
975 5950 3.574614 CACCAAAATAGGTTTCCAAGCG 58.425 45.455 0.00 0.00 40.77 4.68
976 5951 2.560981 ACCAAAATAGGTTTCCAAGCGG 59.439 45.455 0.00 0.00 39.34 5.52
977 5952 2.823154 CCAAAATAGGTTTCCAAGCGGA 59.177 45.455 0.00 0.00 40.60 5.54
1035 6010 2.224159 GGACCAGGGCAAGACCAGA 61.224 63.158 0.00 0.00 42.05 3.86
1074 6049 2.264794 GGCATCCTCGACCAACGT 59.735 61.111 0.00 0.00 43.13 3.99
1083 6061 2.776072 GACCAACGTCGCCATTCG 59.224 61.111 0.00 0.00 40.15 3.34
1403 6411 0.708802 TCCTTCTCCTTCCTACCCGT 59.291 55.000 0.00 0.00 0.00 5.28
1561 7003 1.649271 GGGGTGGGCTCCTCATTCAT 61.649 60.000 0.00 0.00 30.72 2.57
1573 8601 5.467035 TCCTCATTCATTTGAAAACCCAC 57.533 39.130 0.00 0.00 37.61 4.61
1575 8633 5.010922 TCCTCATTCATTTGAAAACCCACAG 59.989 40.000 0.00 0.00 37.61 3.66
1580 8638 2.343163 TTTGAAAACCCACAGCGGCG 62.343 55.000 0.51 0.51 0.00 6.46
1591 8661 4.083862 AGCGGCGGTCCTTCCTTC 62.084 66.667 5.44 0.00 0.00 3.46
1592 8662 4.083862 GCGGCGGTCCTTCCTTCT 62.084 66.667 9.78 0.00 0.00 2.85
1596 8666 1.677637 GGCGGTCCTTCCTTCTCGAT 61.678 60.000 0.00 0.00 0.00 3.59
1659 8732 2.325583 TCGCACATTGGGGAGATAAC 57.674 50.000 0.00 0.00 0.00 1.89
1708 8781 3.053291 GCACCGGACAATGGCGAA 61.053 61.111 9.46 0.00 0.00 4.70
1744 8853 1.131883 CAGGCTTTGCTTCATTCTCCG 59.868 52.381 0.00 0.00 0.00 4.63
1856 8971 1.847968 CTGACCTCCCACCCCAAGT 60.848 63.158 0.00 0.00 0.00 3.16
1936 9078 2.173519 CTGGGATGTTTGTGCTTCCAT 58.826 47.619 0.00 0.00 35.21 3.41
1939 9081 4.352009 TGGGATGTTTGTGCTTCCATATT 58.648 39.130 0.00 0.00 35.21 1.28
1985 9130 0.893727 AGGCGAAACAATGGTGGGAC 60.894 55.000 0.00 0.00 0.00 4.46
2067 9212 2.147150 GGTTCAACAGAGAGGCACTTC 58.853 52.381 0.00 0.00 41.55 3.01
2097 9263 2.115427 TCACAGGGAGACACTTTCACA 58.885 47.619 0.00 0.00 0.00 3.58
2247 9436 3.585289 TGTCCAAGTTATCACCCAGCTTA 59.415 43.478 0.00 0.00 0.00 3.09
2248 9437 3.939592 GTCCAAGTTATCACCCAGCTTAC 59.060 47.826 0.00 0.00 0.00 2.34
2312 9610 9.539825 TTGTTTACACTATTCGGTAGTTTAACA 57.460 29.630 0.00 9.51 41.73 2.41
2405 9723 7.156876 TGCCATCATAAGGACAAGTAAAAAG 57.843 36.000 0.00 0.00 0.00 2.27
2407 9725 6.564328 CCATCATAAGGACAAGTAAAAAGGC 58.436 40.000 0.00 0.00 0.00 4.35
2420 9740 8.107095 ACAAGTAAAAAGGCATCTTCCATACTA 58.893 33.333 0.00 0.00 31.40 1.82
2511 12341 7.422399 TGCTTTTTGTGGTCAAACTAATAGAC 58.578 34.615 0.00 0.00 42.28 2.59
3170 13224 9.691362 GTGTTTGATACTTTGTGGTCAATAAAT 57.309 29.630 0.00 0.00 33.32 1.40
3193 13288 2.746279 TTTGCTGTCCTTCTTCCCAA 57.254 45.000 0.00 0.00 0.00 4.12
3196 13291 2.334977 TGCTGTCCTTCTTCCCAAGTA 58.665 47.619 0.00 0.00 0.00 2.24
3345 13460 0.889186 AGATGCTGGAAAAACGCCGT 60.889 50.000 0.00 0.00 0.00 5.68
3349 13464 1.358759 CTGGAAAAACGCCGTGCTT 59.641 52.632 0.00 0.00 0.00 3.91
3427 13558 1.938577 CAGGGCTGATTCGTTGATGAG 59.061 52.381 0.00 0.00 0.00 2.90
3429 13560 1.936547 GGGCTGATTCGTTGATGAGAC 59.063 52.381 0.00 0.00 0.00 3.36
3431 13562 2.263077 GCTGATTCGTTGATGAGACGT 58.737 47.619 0.00 0.00 41.08 4.34
3573 13705 8.728088 AGTGTTTTTATCTTGCGTTTGATTAG 57.272 30.769 0.00 0.00 0.00 1.73
3580 13712 0.525761 TGCGTTTGATTAGCCTTGCC 59.474 50.000 0.00 0.00 0.00 4.52
3592 13724 1.889170 AGCCTTGCCAAAAGCTAAGAC 59.111 47.619 0.02 0.00 44.23 3.01
3647 13893 5.614324 TGTCAGGTATTCAGATGTAAGGG 57.386 43.478 0.00 0.00 0.00 3.95
3648 13894 5.030147 TGTCAGGTATTCAGATGTAAGGGT 58.970 41.667 0.00 0.00 0.00 4.34
3649 13895 5.128827 TGTCAGGTATTCAGATGTAAGGGTC 59.871 44.000 0.00 0.00 0.00 4.46
3656 13933 5.825593 TTCAGATGTAAGGGTCAGACTTT 57.174 39.130 0.00 0.00 0.00 2.66
3661 13938 6.017192 AGATGTAAGGGTCAGACTTTCAGTA 58.983 40.000 0.00 0.00 30.55 2.74
3663 13940 4.282703 TGTAAGGGTCAGACTTTCAGTACC 59.717 45.833 0.00 0.00 0.00 3.34
3665 13942 1.067071 GGGTCAGACTTTCAGTACCGG 60.067 57.143 0.00 0.00 0.00 5.28
3711 13988 1.067635 CATATTATTTGGCGGCCCTGC 60.068 52.381 17.97 0.00 0.00 4.85
3715 13992 0.750182 TATTTGGCGGCCCTGCTAAC 60.750 55.000 17.97 0.00 34.90 2.34
3716 13993 2.499303 ATTTGGCGGCCCTGCTAACT 62.499 55.000 17.97 0.00 34.90 2.24
3717 13994 1.843462 TTTGGCGGCCCTGCTAACTA 61.843 55.000 17.97 0.00 34.90 2.24
3718 13995 2.203029 GGCGGCCCTGCTAACTAC 60.203 66.667 8.12 0.00 34.52 2.73
3723 14000 2.365582 CGGCCCTGCTAACTACAAAAT 58.634 47.619 0.00 0.00 0.00 1.82
3724 14001 2.097466 CGGCCCTGCTAACTACAAAATG 59.903 50.000 0.00 0.00 0.00 2.32
3778 14088 5.105473 AGGGTTGATTTCTTCATGATTGCAG 60.105 40.000 0.00 0.00 33.34 4.41
3948 15068 2.824341 CGTCAGTACCTTACTTCAGGGT 59.176 50.000 0.00 0.00 38.42 4.34
3949 15069 3.257624 CGTCAGTACCTTACTTCAGGGTT 59.742 47.826 0.00 0.00 38.42 4.11
3951 15071 3.007614 TCAGTACCTTACTTCAGGGTTGC 59.992 47.826 0.00 0.00 38.42 4.17
3962 15082 1.761784 TCAGGGTTGCAATGTGCTTTT 59.238 42.857 0.59 0.00 45.31 2.27
3981 15101 5.278463 GCTTTTCTGTTTCAGGATTGCAGTA 60.278 40.000 0.00 0.00 31.51 2.74
4031 15246 8.286191 AGCTTTAGATTGTTCTTAGGATTTGG 57.714 34.615 0.00 0.00 33.17 3.28
4032 15247 7.890655 AGCTTTAGATTGTTCTTAGGATTTGGT 59.109 33.333 0.00 0.00 33.17 3.67
4033 15248 9.174166 GCTTTAGATTGTTCTTAGGATTTGGTA 57.826 33.333 0.00 0.00 33.17 3.25
4038 15253 9.838339 AGATTGTTCTTAGGATTTGGTACATAG 57.162 33.333 0.00 0.00 39.30 2.23
4039 15254 7.859325 TTGTTCTTAGGATTTGGTACATAGC 57.141 36.000 0.00 0.00 39.30 2.97
4040 15255 6.354130 TGTTCTTAGGATTTGGTACATAGCC 58.646 40.000 0.00 0.00 45.96 3.93
4044 15259 3.857157 GGATTTGGTACATAGCCAGGA 57.143 47.619 0.00 0.00 44.98 3.86
4045 15260 4.373156 GGATTTGGTACATAGCCAGGAT 57.627 45.455 0.00 0.00 44.98 3.24
4046 15261 4.729868 GGATTTGGTACATAGCCAGGATT 58.270 43.478 0.00 0.00 44.98 3.01
4047 15262 5.140454 GGATTTGGTACATAGCCAGGATTT 58.860 41.667 0.00 0.00 44.98 2.17
4048 15263 5.598417 GGATTTGGTACATAGCCAGGATTTT 59.402 40.000 0.00 0.00 44.98 1.82
4049 15264 6.239036 GGATTTGGTACATAGCCAGGATTTTC 60.239 42.308 0.00 0.00 44.98 2.29
4169 15387 5.523916 TCTCAGAACAAACTTACAGCAGAAC 59.476 40.000 0.00 0.00 0.00 3.01
4171 15389 4.576463 CAGAACAAACTTACAGCAGAACCT 59.424 41.667 0.00 0.00 0.00 3.50
4172 15390 4.576463 AGAACAAACTTACAGCAGAACCTG 59.424 41.667 0.00 0.00 38.78 4.00
4173 15391 4.150897 ACAAACTTACAGCAGAACCTGA 57.849 40.909 0.00 0.00 36.67 3.86
4175 15393 3.409026 AACTTACAGCAGAACCTGAGG 57.591 47.619 0.00 0.00 36.67 3.86
4176 15394 2.330216 ACTTACAGCAGAACCTGAGGT 58.670 47.619 0.00 0.00 37.65 3.85
4245 15463 3.713858 CAACAGAAATGGTGCACAGAA 57.286 42.857 20.43 3.64 0.00 3.02
4246 15464 3.374745 CAACAGAAATGGTGCACAGAAC 58.625 45.455 20.43 0.95 0.00 3.01
4247 15465 2.653726 ACAGAAATGGTGCACAGAACA 58.346 42.857 20.43 7.64 0.00 3.18
4249 15467 3.067180 ACAGAAATGGTGCACAGAACAAG 59.933 43.478 20.43 5.83 0.00 3.16
4250 15468 3.067180 CAGAAATGGTGCACAGAACAAGT 59.933 43.478 20.43 0.00 0.00 3.16
4251 15469 4.275689 CAGAAATGGTGCACAGAACAAGTA 59.724 41.667 20.43 0.00 0.00 2.24
4252 15470 4.516698 AGAAATGGTGCACAGAACAAGTAG 59.483 41.667 20.43 0.00 0.00 2.57
4253 15471 2.254546 TGGTGCACAGAACAAGTAGG 57.745 50.000 20.43 0.00 0.00 3.18
4254 15472 1.765904 TGGTGCACAGAACAAGTAGGA 59.234 47.619 20.43 0.00 0.00 2.94
4255 15473 2.171659 TGGTGCACAGAACAAGTAGGAA 59.828 45.455 20.43 0.00 0.00 3.36
4256 15474 2.808543 GGTGCACAGAACAAGTAGGAAG 59.191 50.000 20.43 0.00 0.00 3.46
4257 15475 2.224314 GTGCACAGAACAAGTAGGAAGC 59.776 50.000 13.17 0.00 0.00 3.86
4258 15476 2.158827 TGCACAGAACAAGTAGGAAGCA 60.159 45.455 0.00 0.00 0.00 3.91
4259 15477 2.481952 GCACAGAACAAGTAGGAAGCAG 59.518 50.000 0.00 0.00 0.00 4.24
4260 15478 2.481952 CACAGAACAAGTAGGAAGCAGC 59.518 50.000 0.00 0.00 0.00 5.25
4261 15479 2.370189 ACAGAACAAGTAGGAAGCAGCT 59.630 45.455 0.00 0.00 0.00 4.24
4262 15480 3.578716 ACAGAACAAGTAGGAAGCAGCTA 59.421 43.478 0.00 0.00 0.00 3.32
4263 15481 4.180057 CAGAACAAGTAGGAAGCAGCTAG 58.820 47.826 0.00 0.00 0.00 3.42
4273 15491 3.257933 GCAGCTAGCCACACACAC 58.742 61.111 12.13 0.00 37.23 3.82
4274 15492 1.597854 GCAGCTAGCCACACACACA 60.598 57.895 12.13 0.00 37.23 3.72
4275 15493 1.845809 GCAGCTAGCCACACACACAC 61.846 60.000 12.13 0.00 37.23 3.82
4276 15494 0.532640 CAGCTAGCCACACACACACA 60.533 55.000 12.13 0.00 0.00 3.72
4277 15495 0.532862 AGCTAGCCACACACACACAC 60.533 55.000 12.13 0.00 0.00 3.82
4278 15496 0.813610 GCTAGCCACACACACACACA 60.814 55.000 2.29 0.00 0.00 3.72
4279 15497 0.937304 CTAGCCACACACACACACAC 59.063 55.000 0.00 0.00 0.00 3.82
4280 15498 0.808060 TAGCCACACACACACACACG 60.808 55.000 0.00 0.00 0.00 4.49
4281 15499 2.403186 CCACACACACACACACGC 59.597 61.111 0.00 0.00 0.00 5.34
4282 15500 2.394563 CCACACACACACACACGCA 61.395 57.895 0.00 0.00 0.00 5.24
4283 15501 1.225991 CACACACACACACACGCAC 60.226 57.895 0.00 0.00 0.00 5.34
4284 15502 1.669437 ACACACACACACACGCACA 60.669 52.632 0.00 0.00 0.00 4.57
4285 15503 1.225991 CACACACACACACGCACAC 60.226 57.895 0.00 0.00 0.00 3.82
4289 15507 1.225991 CACACACACGCACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4291 15509 1.225991 CACACACGCACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4292 15510 1.669437 ACACACGCACACACACACA 60.669 52.632 0.00 0.00 0.00 3.72
4293 15511 1.225991 CACACGCACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4294 15512 1.669437 ACACGCACACACACACACA 60.669 52.632 0.00 0.00 0.00 3.72
4295 15513 1.225991 CACGCACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4296 15514 1.669437 ACGCACACACACACACACA 60.669 52.632 0.00 0.00 0.00 3.72
4297 15515 1.225991 CGCACACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4299 15517 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
4300 15518 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4301 15519 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4303 15521 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4304 15522 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4305 15523 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4306 15524 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4307 15525 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4308 15526 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4309 15527 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4310 15528 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4311 15529 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4313 15531 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4314 15532 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4315 15533 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4317 15535 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4318 15536 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4319 15537 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4322 15540 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4323 15541 1.468127 CACACACACACACACACACAT 59.532 47.619 0.00 0.00 0.00 3.21
4324 15542 2.675348 CACACACACACACACACACATA 59.325 45.455 0.00 0.00 0.00 2.29
4325 15543 2.675844 ACACACACACACACACACATAC 59.324 45.455 0.00 0.00 0.00 2.39
4326 15544 2.675348 CACACACACACACACACATACA 59.325 45.455 0.00 0.00 0.00 2.29
4327 15545 2.935849 ACACACACACACACACATACAG 59.064 45.455 0.00 0.00 0.00 2.74
4328 15546 2.287644 CACACACACACACACATACAGG 59.712 50.000 0.00 0.00 0.00 4.00
4329 15547 1.264020 CACACACACACACATACAGGC 59.736 52.381 0.00 0.00 0.00 4.85
4330 15548 1.134250 ACACACACACACATACAGGCA 60.134 47.619 0.00 0.00 0.00 4.75
4333 15551 1.264020 CACACACACATACAGGCACAC 59.736 52.381 0.00 0.00 0.00 3.82
4335 15553 2.153645 CACACACATACAGGCACACAT 58.846 47.619 0.00 0.00 0.00 3.21
4336 15554 3.244387 ACACACACATACAGGCACACATA 60.244 43.478 0.00 0.00 0.00 2.29
4338 15556 3.244387 ACACACATACAGGCACACATACA 60.244 43.478 0.00 0.00 0.00 2.29
4339 15557 3.940852 CACACATACAGGCACACATACAT 59.059 43.478 0.00 0.00 0.00 2.29
4341 15559 5.006649 CACACATACAGGCACACATACATAC 59.993 44.000 0.00 0.00 0.00 2.39
4342 15560 5.115480 CACATACAGGCACACATACATACA 58.885 41.667 0.00 0.00 0.00 2.29
4343 15561 5.759763 CACATACAGGCACACATACATACAT 59.240 40.000 0.00 0.00 0.00 2.29
4344 15562 6.928492 CACATACAGGCACACATACATACATA 59.072 38.462 0.00 0.00 0.00 2.29
4345 15563 6.929049 ACATACAGGCACACATACATACATAC 59.071 38.462 0.00 0.00 0.00 2.39
4346 15564 5.351948 ACAGGCACACATACATACATACA 57.648 39.130 0.00 0.00 0.00 2.29
4349 15567 7.679783 ACAGGCACACATACATACATACATAT 58.320 34.615 0.00 0.00 0.00 1.78
4350 15568 7.819415 ACAGGCACACATACATACATACATATC 59.181 37.037 0.00 0.00 0.00 1.63
4354 15572 9.423061 GCACACATACATACATACATATCTCAA 57.577 33.333 0.00 0.00 0.00 3.02
4356 15574 9.645059 ACACATACATACATACATATCTCAAGC 57.355 33.333 0.00 0.00 0.00 4.01
4357 15575 9.866798 CACATACATACATACATATCTCAAGCT 57.133 33.333 0.00 0.00 0.00 3.74
4358 15576 9.866798 ACATACATACATACATATCTCAAGCTG 57.133 33.333 0.00 0.00 0.00 4.24
4363 15581 9.303537 CATACATACATATCTCAAGCTGATCTG 57.696 37.037 0.00 0.00 0.00 2.90
4364 15582 7.536159 ACATACATATCTCAAGCTGATCTGA 57.464 36.000 3.42 0.00 0.00 3.27
4365 15583 7.604549 ACATACATATCTCAAGCTGATCTGAG 58.395 38.462 6.78 6.78 0.00 3.35
4366 15584 7.233144 ACATACATATCTCAAGCTGATCTGAGT 59.767 37.037 11.87 4.08 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.373224 GAAGGGGGAGAAGAAATGCAG 58.627 52.381 0.00 0.00 0.00 4.41
6 7 2.849318 CAGAGGAAGGGGGAGAAGAAAT 59.151 50.000 0.00 0.00 0.00 2.17
7 8 2.269940 CAGAGGAAGGGGGAGAAGAAA 58.730 52.381 0.00 0.00 0.00 2.52
10 11 0.620121 AGCAGAGGAAGGGGGAGAAG 60.620 60.000 0.00 0.00 0.00 2.85
12 13 0.263172 CTAGCAGAGGAAGGGGGAGA 59.737 60.000 0.00 0.00 0.00 3.71
28 29 4.399004 AGCACACAGGATTAAGAGCTAG 57.601 45.455 0.00 0.00 0.00 3.42
29 30 5.422331 ACTTAGCACACAGGATTAAGAGCTA 59.578 40.000 0.00 0.00 32.70 3.32
30 31 4.223923 ACTTAGCACACAGGATTAAGAGCT 59.776 41.667 0.00 0.00 35.06 4.09
33 34 4.253685 GCACTTAGCACACAGGATTAAGA 58.746 43.478 0.00 0.00 44.79 2.10
49 50 2.839486 ACAGCTAGCACTTGCACTTA 57.161 45.000 18.83 0.00 45.16 2.24
50 51 1.972872 AACAGCTAGCACTTGCACTT 58.027 45.000 18.83 0.00 45.16 3.16
51 52 2.839486 TAACAGCTAGCACTTGCACT 57.161 45.000 18.83 0.00 45.16 4.40
53 54 3.673902 TGATTAACAGCTAGCACTTGCA 58.326 40.909 18.83 3.14 45.16 4.08
56 57 6.127054 TGAGGTATGATTAACAGCTAGCACTT 60.127 38.462 18.83 9.72 0.00 3.16
57 58 5.363868 TGAGGTATGATTAACAGCTAGCACT 59.636 40.000 18.83 2.82 0.00 4.40
60 61 5.121454 GCATGAGGTATGATTAACAGCTAGC 59.879 44.000 6.62 6.62 39.21 3.42
62 63 6.173427 TGCATGAGGTATGATTAACAGCTA 57.827 37.500 0.00 0.00 39.21 3.32
63 64 5.039920 TGCATGAGGTATGATTAACAGCT 57.960 39.130 0.00 0.00 39.21 4.24
64 65 4.818546 ACTGCATGAGGTATGATTAACAGC 59.181 41.667 0.00 0.00 39.21 4.40
65 66 6.051074 TGACTGCATGAGGTATGATTAACAG 58.949 40.000 0.00 0.00 39.21 3.16
66 67 5.988287 TGACTGCATGAGGTATGATTAACA 58.012 37.500 0.00 0.00 39.21 2.41
69 70 5.104569 TGGTTGACTGCATGAGGTATGATTA 60.105 40.000 0.00 0.00 39.21 1.75
70 71 4.202441 GGTTGACTGCATGAGGTATGATT 58.798 43.478 0.00 0.00 39.21 2.57
71 72 3.200605 TGGTTGACTGCATGAGGTATGAT 59.799 43.478 0.00 0.00 39.21 2.45
75 76 3.500448 TTTGGTTGACTGCATGAGGTA 57.500 42.857 0.00 0.00 0.00 3.08
76 77 2.362077 GTTTTGGTTGACTGCATGAGGT 59.638 45.455 0.00 0.00 0.00 3.85
77 78 2.605338 CGTTTTGGTTGACTGCATGAGG 60.605 50.000 0.00 0.00 0.00 3.86
79 80 1.268999 GCGTTTTGGTTGACTGCATGA 60.269 47.619 0.00 0.00 0.00 3.07
81 82 0.317770 CGCGTTTTGGTTGACTGCAT 60.318 50.000 0.00 0.00 0.00 3.96
82 83 1.063327 CGCGTTTTGGTTGACTGCA 59.937 52.632 0.00 0.00 0.00 4.41
85 86 1.595794 CTACACGCGTTTTGGTTGACT 59.404 47.619 10.22 0.00 0.00 3.41
90 91 1.371595 ACAACTACACGCGTTTTGGT 58.628 45.000 10.22 7.18 0.00 3.67
92 93 2.900046 GCATACAACTACACGCGTTTTG 59.100 45.455 10.22 13.29 0.00 2.44
93 94 2.544686 TGCATACAACTACACGCGTTTT 59.455 40.909 10.22 1.15 0.00 2.43
94 95 2.096614 GTGCATACAACTACACGCGTTT 60.097 45.455 10.22 5.90 0.00 3.60
95 96 1.458064 GTGCATACAACTACACGCGTT 59.542 47.619 10.22 3.81 0.00 4.84
98 99 0.368907 CGGTGCATACAACTACACGC 59.631 55.000 0.00 0.00 33.81 5.34
102 103 2.679450 TGTCACGGTGCATACAACTAC 58.321 47.619 2.51 0.00 0.00 2.73
103 104 3.388345 TTGTCACGGTGCATACAACTA 57.612 42.857 2.51 0.00 0.00 2.24
104 105 2.248280 TTGTCACGGTGCATACAACT 57.752 45.000 2.51 0.00 0.00 3.16
107 108 0.801872 GCATTGTCACGGTGCATACA 59.198 50.000 2.51 0.00 38.68 2.29
108 109 0.801872 TGCATTGTCACGGTGCATAC 59.198 50.000 2.51 0.00 43.30 2.39
109 110 1.085893 CTGCATTGTCACGGTGCATA 58.914 50.000 7.30 0.00 46.52 3.14
110 111 1.588824 CCTGCATTGTCACGGTGCAT 61.589 55.000 7.30 0.00 46.52 3.96
111 112 2.260154 CCTGCATTGTCACGGTGCA 61.260 57.895 2.51 6.72 45.69 4.57
114 115 1.528076 TTGCCTGCATTGTCACGGT 60.528 52.632 0.00 0.00 0.00 4.83
116 117 1.081242 GGTTGCCTGCATTGTCACG 60.081 57.895 0.00 0.00 0.00 4.35
117 118 0.388659 TTGGTTGCCTGCATTGTCAC 59.611 50.000 0.00 0.00 0.00 3.67
118 119 1.117994 TTTGGTTGCCTGCATTGTCA 58.882 45.000 0.00 0.00 0.00 3.58
119 120 1.202510 TGTTTGGTTGCCTGCATTGTC 60.203 47.619 0.00 0.00 0.00 3.18
120 121 0.829333 TGTTTGGTTGCCTGCATTGT 59.171 45.000 0.00 0.00 0.00 2.71
125 126 1.219646 CATGTTGTTTGGTTGCCTGC 58.780 50.000 0.00 0.00 0.00 4.85
127 128 3.684693 GCATGTTGTTTGGTTGCCT 57.315 47.368 0.00 0.00 0.00 4.75
128 129 2.615774 GGCATGTTGTTTGGTTGCC 58.384 52.632 0.00 0.00 45.31 4.52
131 132 3.625649 ACTTTGGCATGTTGTTTGGTT 57.374 38.095 0.00 0.00 0.00 3.67
132 133 3.055530 TCAACTTTGGCATGTTGTTTGGT 60.056 39.130 23.57 0.00 42.71 3.67
135 136 4.379652 GGATCAACTTTGGCATGTTGTTT 58.620 39.130 23.57 16.44 42.71 2.83
136 137 3.244181 GGGATCAACTTTGGCATGTTGTT 60.244 43.478 23.57 18.68 42.71 2.83
137 138 2.299867 GGGATCAACTTTGGCATGTTGT 59.700 45.455 23.57 15.58 42.71 3.32
139 140 1.901833 GGGGATCAACTTTGGCATGTT 59.098 47.619 0.00 0.00 0.00 2.71
142 143 3.756082 TTAGGGGATCAACTTTGGCAT 57.244 42.857 0.00 0.00 0.00 4.40
143 144 3.364549 CATTAGGGGATCAACTTTGGCA 58.635 45.455 0.00 0.00 0.00 4.92
144 145 2.101415 GCATTAGGGGATCAACTTTGGC 59.899 50.000 0.00 0.00 0.00 4.52
146 147 3.382546 CCTGCATTAGGGGATCAACTTTG 59.617 47.826 0.00 0.00 43.33 2.77
147 148 3.635591 CCTGCATTAGGGGATCAACTTT 58.364 45.455 0.00 0.00 43.33 2.66
148 149 3.303351 CCTGCATTAGGGGATCAACTT 57.697 47.619 0.00 0.00 43.33 2.66
160 161 4.309933 CTGCATATCGACTTCCTGCATTA 58.690 43.478 8.89 0.00 41.55 1.90
162 163 2.549563 CCTGCATATCGACTTCCTGCAT 60.550 50.000 8.89 0.00 41.55 3.96
163 164 1.202568 CCTGCATATCGACTTCCTGCA 60.203 52.381 8.34 8.34 40.29 4.41
164 165 1.506493 CCTGCATATCGACTTCCTGC 58.494 55.000 0.00 0.00 0.00 4.85
165 166 1.202568 TGCCTGCATATCGACTTCCTG 60.203 52.381 0.00 0.00 0.00 3.86
167 168 1.599542 GTTGCCTGCATATCGACTTCC 59.400 52.381 0.00 0.00 0.00 3.46
168 169 1.599542 GGTTGCCTGCATATCGACTTC 59.400 52.381 0.00 0.00 0.00 3.01
169 170 1.065491 TGGTTGCCTGCATATCGACTT 60.065 47.619 0.00 0.00 0.00 3.01
170 171 0.541392 TGGTTGCCTGCATATCGACT 59.459 50.000 0.00 0.00 0.00 4.18
171 172 1.378531 TTGGTTGCCTGCATATCGAC 58.621 50.000 0.00 0.00 0.00 4.20
172 173 1.742831 GTTTGGTTGCCTGCATATCGA 59.257 47.619 0.00 0.00 0.00 3.59
174 175 3.056607 AGTTGTTTGGTTGCCTGCATATC 60.057 43.478 0.00 0.00 0.00 1.63
177 178 1.122227 AGTTGTTTGGTTGCCTGCAT 58.878 45.000 0.00 0.00 0.00 3.96
178 179 0.901124 AAGTTGTTTGGTTGCCTGCA 59.099 45.000 0.00 0.00 0.00 4.41
180 181 1.289276 GCAAGTTGTTTGGTTGCCTG 58.711 50.000 4.48 0.00 40.61 4.85
182 183 1.134848 TCTGCAAGTTGTTTGGTTGCC 60.135 47.619 4.48 0.00 44.90 4.52
183 184 2.292103 TCTGCAAGTTGTTTGGTTGC 57.708 45.000 4.48 0.00 45.56 4.17
185 186 3.489059 CGACATCTGCAAGTTGTTTGGTT 60.489 43.478 4.48 0.00 46.23 3.67
186 187 2.033299 CGACATCTGCAAGTTGTTTGGT 59.967 45.455 4.48 0.00 46.23 3.67
187 188 2.653890 CGACATCTGCAAGTTGTTTGG 58.346 47.619 4.48 0.00 46.23 3.28
189 190 1.675483 TGCGACATCTGCAAGTTGTTT 59.325 42.857 4.48 0.00 46.23 2.83
190 191 1.308047 TGCGACATCTGCAAGTTGTT 58.692 45.000 4.48 0.00 46.23 2.83
193 194 3.534554 TCATATGCGACATCTGCAAGTT 58.465 40.909 0.00 0.00 46.87 2.66
194 195 3.129109 CTCATATGCGACATCTGCAAGT 58.871 45.455 0.00 0.00 46.87 3.16
198 199 0.795085 GCCTCATATGCGACATCTGC 59.205 55.000 0.00 0.00 0.00 4.26
200 201 1.690893 ACAGCCTCATATGCGACATCT 59.309 47.619 0.00 0.00 0.00 2.90
201 202 2.160822 ACAGCCTCATATGCGACATC 57.839 50.000 0.00 0.00 0.00 3.06
204 205 3.764885 AAAAACAGCCTCATATGCGAC 57.235 42.857 0.00 0.00 0.00 5.19
221 222 3.662759 ACCCAACCTGACTCTGAAAAA 57.337 42.857 0.00 0.00 0.00 1.94
222 223 3.053991 TCAACCCAACCTGACTCTGAAAA 60.054 43.478 0.00 0.00 0.00 2.29
223 224 2.507886 TCAACCCAACCTGACTCTGAAA 59.492 45.455 0.00 0.00 0.00 2.69
224 225 2.104792 CTCAACCCAACCTGACTCTGAA 59.895 50.000 0.00 0.00 0.00 3.02
228 229 2.039084 ACATCTCAACCCAACCTGACTC 59.961 50.000 0.00 0.00 0.00 3.36
231 232 1.774254 ACACATCTCAACCCAACCTGA 59.226 47.619 0.00 0.00 0.00 3.86
233 234 3.873801 GCATACACATCTCAACCCAACCT 60.874 47.826 0.00 0.00 0.00 3.50
234 235 2.423538 GCATACACATCTCAACCCAACC 59.576 50.000 0.00 0.00 0.00 3.77
235 236 3.081061 TGCATACACATCTCAACCCAAC 58.919 45.455 0.00 0.00 0.00 3.77
238 239 2.095853 CGTTGCATACACATCTCAACCC 59.904 50.000 0.00 0.00 35.03 4.11
239 240 2.476185 GCGTTGCATACACATCTCAACC 60.476 50.000 0.00 0.00 35.03 3.77
240 241 2.159430 TGCGTTGCATACACATCTCAAC 59.841 45.455 0.00 0.00 31.71 3.18
241 242 2.416202 CTGCGTTGCATACACATCTCAA 59.584 45.455 0.00 0.00 38.13 3.02
243 244 1.328680 CCTGCGTTGCATACACATCTC 59.671 52.381 0.00 0.00 38.13 2.75
244 245 1.339055 ACCTGCGTTGCATACACATCT 60.339 47.619 0.00 0.00 38.13 2.90
245 246 1.086696 ACCTGCGTTGCATACACATC 58.913 50.000 0.00 0.00 38.13 3.06
246 247 2.006888 GTACCTGCGTTGCATACACAT 58.993 47.619 0.00 0.00 38.13 3.21
247 248 1.001520 AGTACCTGCGTTGCATACACA 59.998 47.619 5.62 0.00 38.13 3.72
248 249 1.722011 AGTACCTGCGTTGCATACAC 58.278 50.000 5.62 0.00 38.13 2.90
251 252 4.116961 GTGAATAGTACCTGCGTTGCATA 58.883 43.478 0.00 0.00 38.13 3.14
252 253 2.936498 GTGAATAGTACCTGCGTTGCAT 59.064 45.455 0.00 0.00 38.13 3.96
253 254 2.028476 AGTGAATAGTACCTGCGTTGCA 60.028 45.455 0.00 0.00 36.92 4.08
254 255 2.618053 AGTGAATAGTACCTGCGTTGC 58.382 47.619 0.00 0.00 0.00 4.17
256 257 4.677250 GCTGTAGTGAATAGTACCTGCGTT 60.677 45.833 0.00 0.00 32.74 4.84
259 260 4.386867 TGCTGTAGTGAATAGTACCTGC 57.613 45.455 0.00 0.00 34.55 4.85
261 262 4.775780 TGGTTGCTGTAGTGAATAGTACCT 59.224 41.667 0.00 0.00 32.74 3.08
264 265 6.425721 GTGTTTGGTTGCTGTAGTGAATAGTA 59.574 38.462 0.00 0.00 0.00 1.82
265 266 5.238650 GTGTTTGGTTGCTGTAGTGAATAGT 59.761 40.000 0.00 0.00 0.00 2.12
267 268 4.212425 CGTGTTTGGTTGCTGTAGTGAATA 59.788 41.667 0.00 0.00 0.00 1.75
270 271 1.937223 CGTGTTTGGTTGCTGTAGTGA 59.063 47.619 0.00 0.00 0.00 3.41
273 274 0.040425 GGCGTGTTTGGTTGCTGTAG 60.040 55.000 0.00 0.00 0.00 2.74
274 275 1.448922 GGGCGTGTTTGGTTGCTGTA 61.449 55.000 0.00 0.00 0.00 2.74
276 277 2.027460 GGGCGTGTTTGGTTGCTG 59.973 61.111 0.00 0.00 0.00 4.41
279 280 1.067250 CAAGGGGCGTGTTTGGTTG 59.933 57.895 0.00 0.00 0.00 3.77
280 281 1.380650 ACAAGGGGCGTGTTTGGTT 60.381 52.632 0.00 0.00 0.00 3.67
281 282 2.124693 CACAAGGGGCGTGTTTGGT 61.125 57.895 0.00 0.00 0.00 3.67
283 284 2.027460 GCACAAGGGGCGTGTTTG 59.973 61.111 0.00 0.00 36.71 2.93
284 285 3.223589 GGCACAAGGGGCGTGTTT 61.224 61.111 0.00 0.00 36.71 2.83
290 291 2.440980 GATCAGGGCACAAGGGGC 60.441 66.667 0.00 0.00 0.00 5.80
291 292 1.077212 CAGATCAGGGCACAAGGGG 60.077 63.158 0.00 0.00 0.00 4.79
293 294 0.325933 TGTCAGATCAGGGCACAAGG 59.674 55.000 0.00 0.00 0.00 3.61
296 297 1.629861 TCATTGTCAGATCAGGGCACA 59.370 47.619 0.00 0.00 0.00 4.57
298 299 3.284617 CAATCATTGTCAGATCAGGGCA 58.715 45.455 0.00 0.00 0.00 5.36
299 300 3.285484 ACAATCATTGTCAGATCAGGGC 58.715 45.455 0.00 0.00 40.56 5.19
300 301 4.439700 GCAACAATCATTGTCAGATCAGGG 60.440 45.833 2.74 0.00 44.59 4.45
302 303 5.562506 AGCAACAATCATTGTCAGATCAG 57.437 39.130 2.74 0.00 44.59 2.90
383 5067 3.359033 TCGCAGAGCCTTAGTTAACCTA 58.641 45.455 0.88 0.00 0.00 3.08
384 5068 2.176889 TCGCAGAGCCTTAGTTAACCT 58.823 47.619 0.88 0.00 0.00 3.50
385 5069 2.667473 TCGCAGAGCCTTAGTTAACC 57.333 50.000 0.88 0.00 0.00 2.85
473 5157 3.350833 TCTCCTTAACACCGACTACCTC 58.649 50.000 0.00 0.00 0.00 3.85
478 5162 2.496470 GGTCATCTCCTTAACACCGACT 59.504 50.000 0.00 0.00 0.00 4.18
482 5166 2.838202 TCCTGGTCATCTCCTTAACACC 59.162 50.000 0.00 0.00 0.00 4.16
484 5168 3.107601 CCTCCTGGTCATCTCCTTAACA 58.892 50.000 0.00 0.00 0.00 2.41
490 5174 2.397044 AGATCCTCCTGGTCATCTCC 57.603 55.000 0.00 0.00 34.23 3.71
491 5175 5.083122 TCAATAGATCCTCCTGGTCATCTC 58.917 45.833 7.70 0.00 31.69 2.75
517 5204 5.911752 AGATAGATCAACACTGCAACTAGG 58.088 41.667 0.00 0.00 0.00 3.02
573 5261 8.568794 AGGCTAACTTTTAAATTCTTCACTGAC 58.431 33.333 0.00 0.00 0.00 3.51
587 5275 6.586344 CATCTCATCTCCAGGCTAACTTTTA 58.414 40.000 0.00 0.00 0.00 1.52
668 5356 7.684317 TTACAGTAATATCCTCCCATGTTCA 57.316 36.000 0.00 0.00 0.00 3.18
727 5415 8.430431 GGAAGGCCTCAAGTAAGTAGTAATAAT 58.570 37.037 5.23 0.00 0.00 1.28
728 5416 7.417116 CGGAAGGCCTCAAGTAAGTAGTAATAA 60.417 40.741 5.23 0.00 0.00 1.40
729 5417 6.040166 CGGAAGGCCTCAAGTAAGTAGTAATA 59.960 42.308 5.23 0.00 0.00 0.98
730 5418 5.163437 CGGAAGGCCTCAAGTAAGTAGTAAT 60.163 44.000 5.23 0.00 0.00 1.89
731 5419 4.159135 CGGAAGGCCTCAAGTAAGTAGTAA 59.841 45.833 5.23 0.00 0.00 2.24
732 5420 3.698040 CGGAAGGCCTCAAGTAAGTAGTA 59.302 47.826 5.23 0.00 0.00 1.82
733 5421 2.496470 CGGAAGGCCTCAAGTAAGTAGT 59.504 50.000 5.23 0.00 0.00 2.73
734 5422 3.166489 CGGAAGGCCTCAAGTAAGTAG 57.834 52.381 5.23 0.00 0.00 2.57
751 5439 8.945481 TTTATCGTTCAAAATAATAGTCCGGA 57.055 30.769 0.00 0.00 0.00 5.14
769 5457 7.411804 CGACAGGTAATTTAACCGTTTTATCGT 60.412 37.037 0.00 0.00 44.77 3.73
779 5467 5.119743 GTCACACTCGACAGGTAATTTAACC 59.880 44.000 0.00 0.00 40.06 2.85
789 5477 0.600255 GTTGGGTCACACTCGACAGG 60.600 60.000 0.00 0.00 37.66 4.00
790 5478 0.389391 AGTTGGGTCACACTCGACAG 59.611 55.000 0.00 0.00 35.37 3.51
792 5480 1.067776 CCTAGTTGGGTCACACTCGAC 60.068 57.143 0.00 0.00 33.01 4.20
793 5481 1.254026 CCTAGTTGGGTCACACTCGA 58.746 55.000 0.00 0.00 0.00 4.04
794 5482 3.814577 CCTAGTTGGGTCACACTCG 57.185 57.895 0.00 0.00 0.00 4.18
804 5492 3.094484 TGGTTTTATGCCCCTAGTTGG 57.906 47.619 0.00 0.00 0.00 3.77
805 5493 5.675684 AATTGGTTTTATGCCCCTAGTTG 57.324 39.130 0.00 0.00 0.00 3.16
806 5494 6.553476 GGATAATTGGTTTTATGCCCCTAGTT 59.447 38.462 0.00 0.00 0.00 2.24
807 5495 6.075315 GGATAATTGGTTTTATGCCCCTAGT 58.925 40.000 0.00 0.00 0.00 2.57
808 5496 5.480422 GGGATAATTGGTTTTATGCCCCTAG 59.520 44.000 4.02 0.00 41.63 3.02
811 5499 3.006430 CGGGATAATTGGTTTTATGCCCC 59.994 47.826 8.55 0.00 43.44 5.80
812 5500 3.892588 TCGGGATAATTGGTTTTATGCCC 59.107 43.478 8.55 0.00 43.44 5.36
813 5501 5.469479 CATCGGGATAATTGGTTTTATGCC 58.531 41.667 5.06 5.06 43.12 4.40
814 5502 4.923281 GCATCGGGATAATTGGTTTTATGC 59.077 41.667 0.00 0.00 31.31 3.14
815 5503 6.151691 CAGCATCGGGATAATTGGTTTTATG 58.848 40.000 0.00 0.00 0.00 1.90
816 5504 5.243730 CCAGCATCGGGATAATTGGTTTTAT 59.756 40.000 0.00 0.00 0.00 1.40
817 5505 4.582656 CCAGCATCGGGATAATTGGTTTTA 59.417 41.667 0.00 0.00 0.00 1.52
819 5507 2.958355 CCAGCATCGGGATAATTGGTTT 59.042 45.455 0.00 0.00 0.00 3.27
820 5508 2.586425 CCAGCATCGGGATAATTGGTT 58.414 47.619 0.00 0.00 0.00 3.67
821 5509 2.276732 CCAGCATCGGGATAATTGGT 57.723 50.000 0.00 0.00 0.00 3.67
842 5801 1.986210 AGGGGCTTCCTGCAAATGC 60.986 57.895 0.00 0.00 46.07 3.56
901 5860 1.487976 TGAGGAGTGATGGGATTCAGC 59.512 52.381 0.00 0.00 0.00 4.26
949 5924 3.898741 TGGAAACCTATTTTGGTGGGTTC 59.101 43.478 0.00 0.00 41.46 3.62
972 5947 2.659610 GTGGTGAGAAGCTCCGCT 59.340 61.111 0.00 0.00 42.56 5.52
973 5948 2.435059 GGTGGTGAGAAGCTCCGC 60.435 66.667 0.00 0.00 39.38 5.54
974 5949 2.125912 CGGTGGTGAGAAGCTCCG 60.126 66.667 4.33 4.33 32.74 4.63
975 5950 2.266055 CCGGTGGTGAGAAGCTCC 59.734 66.667 0.00 0.00 0.00 4.70
976 5951 2.435059 GCCGGTGGTGAGAAGCTC 60.435 66.667 1.90 0.00 0.00 4.09
977 5952 4.379243 CGCCGGTGGTGAGAAGCT 62.379 66.667 7.26 0.00 34.74 3.74
1027 6002 0.323908 CGAGGGTCCTCTCTGGTCTT 60.324 60.000 14.34 0.00 40.69 3.01
1035 6010 0.535553 GATCTACGCGAGGGTCCTCT 60.536 60.000 15.93 0.00 40.69 3.69
1074 6049 3.833645 CGGGGAGACGAATGGCGA 61.834 66.667 0.00 0.00 44.57 5.54
1083 6061 4.459089 GGCAGCAGACGGGGAGAC 62.459 72.222 0.00 0.00 0.00 3.36
1218 6209 2.754658 ACGAGGCGACGGAAGGAT 60.755 61.111 11.12 0.00 37.61 3.24
1561 7003 1.439644 GCCGCTGTGGGTTTTCAAA 59.560 52.632 9.65 0.00 38.63 2.69
1573 8601 4.394712 AAGGAAGGACCGCCGCTG 62.395 66.667 1.37 0.00 44.74 5.18
1575 8633 4.083862 AGAAGGAAGGACCGCCGC 62.084 66.667 1.37 0.00 44.74 6.53
1580 8638 0.528684 CGCATCGAGAAGGAAGGACC 60.529 60.000 0.00 0.00 39.35 4.46
1591 8661 4.292178 GGCCTCCTCCGCATCGAG 62.292 72.222 0.00 0.00 0.00 4.04
1613 8686 5.749588 CAGATCACTGTGAATGATGTCTCTC 59.250 44.000 15.31 3.74 36.92 3.20
1708 8781 1.133976 GCCTGCAATCCATGGAGTACT 60.134 52.381 21.33 0.00 45.38 2.73
1744 8853 1.959226 CATATGCGTGCCGGTACCC 60.959 63.158 17.62 8.92 0.00 3.69
1875 8996 3.440173 CCACAATGGATATACCCGCAATC 59.560 47.826 0.00 0.00 40.96 2.67
1877 8998 2.439880 TCCACAATGGATATACCCGCAA 59.560 45.455 0.00 0.00 42.67 4.85
1912 9054 1.609208 AGCACAAACATCCCAGTGAC 58.391 50.000 0.00 0.00 33.99 3.67
2067 9212 3.515502 TGTCTCCCTGTGATACAAGAAGG 59.484 47.826 0.00 0.00 28.09 3.46
2247 9436 6.765036 CAGTAATGAACTATGAAGCATCAGGT 59.235 38.462 0.00 0.00 36.00 4.00
2248 9437 6.765036 ACAGTAATGAACTATGAAGCATCAGG 59.235 38.462 0.00 0.00 36.00 3.86
2300 9489 6.915843 ACAAGCAGAAAAATGTTAAACTACCG 59.084 34.615 0.00 0.00 0.00 4.02
2370 9671 7.560991 TGTCCTTATGATGGCAATTAGAACAAT 59.439 33.333 0.00 0.00 0.00 2.71
2371 9672 6.889177 TGTCCTTATGATGGCAATTAGAACAA 59.111 34.615 0.00 0.00 0.00 2.83
2405 9723 6.155393 AGCCTACTTATAGTATGGAAGATGCC 59.845 42.308 0.57 0.00 29.08 4.40
2407 9725 7.397476 TCCAGCCTACTTATAGTATGGAAGATG 59.603 40.741 5.58 0.00 37.82 2.90
2511 12341 4.142337 TGCATGCCTGACTTGAACAATATG 60.142 41.667 16.68 0.00 0.00 1.78
2810 12720 9.299963 CAACTGATTTCAAATCAAACTGTTACA 57.700 29.630 13.84 0.00 0.00 2.41
2898 12850 5.350091 GCTCTGTCATCCTAGAAAAACTGAC 59.650 44.000 0.00 0.00 34.91 3.51
3170 13224 3.157087 GGGAAGAAGGACAGCAAATTGA 58.843 45.455 0.00 0.00 0.00 2.57
3193 13288 7.885297 TCAGTAAATTGCTTGCAGAAAATACT 58.115 30.769 0.00 0.41 0.00 2.12
3196 13291 6.643770 CACTCAGTAAATTGCTTGCAGAAAAT 59.356 34.615 0.00 0.00 0.00 1.82
3345 13460 0.251474 ATGGGCTTGAGCTTGAAGCA 60.251 50.000 24.75 11.78 46.43 3.91
3349 13464 0.107017 GGCTATGGGCTTGAGCTTGA 60.107 55.000 2.66 0.00 41.70 3.02
3427 13558 2.345641 CGTCACCATCTTGATCAACGTC 59.654 50.000 3.38 0.00 0.00 4.34
3429 13560 2.345641 GTCGTCACCATCTTGATCAACG 59.654 50.000 3.38 4.98 0.00 4.10
3431 13562 2.673893 CGGTCGTCACCATCTTGATCAA 60.674 50.000 8.12 8.12 44.02 2.57
3489 13621 2.905736 ACATACCAAAGGGCAAAAGCAT 59.094 40.909 0.00 0.00 37.90 3.79
3544 13676 5.705609 AACGCAAGATAAAAACACTCCAT 57.294 34.783 0.00 0.00 43.62 3.41
3554 13686 6.321717 CAAGGCTAATCAAACGCAAGATAAA 58.678 36.000 0.00 0.00 43.62 1.40
3573 13705 1.067565 GGTCTTAGCTTTTGGCAAGGC 60.068 52.381 16.00 16.00 44.79 4.35
3580 13712 2.918131 GCTTGCACGGTCTTAGCTTTTG 60.918 50.000 0.00 0.00 0.00 2.44
3592 13724 0.381801 AAACTTGACTGCTTGCACGG 59.618 50.000 0.00 0.00 0.00 4.94
3656 13933 5.108187 ACAATAGAGTAGACCGGTACTGA 57.892 43.478 14.77 3.26 33.18 3.41
3661 13938 5.713861 ACTGTAAACAATAGAGTAGACCGGT 59.286 40.000 6.92 6.92 0.00 5.28
3663 13940 6.849502 TGACTGTAAACAATAGAGTAGACCG 58.150 40.000 0.00 0.00 0.00 4.79
3717 13994 9.643693 GTCATGATGGAAATTAAGTCATTTTGT 57.356 29.630 0.00 0.00 0.00 2.83
3718 13995 9.865321 AGTCATGATGGAAATTAAGTCATTTTG 57.135 29.630 0.00 0.00 0.00 2.44
3862 14184 7.667219 ACTGATCAAAGACACACAGGATAAATT 59.333 33.333 0.00 0.00 0.00 1.82
3870 14192 5.936686 ATCAACTGATCAAAGACACACAG 57.063 39.130 0.00 0.00 0.00 3.66
3877 14199 8.571461 AATTAGCTCAATCAACTGATCAAAGA 57.429 30.769 0.00 0.00 32.75 2.52
3948 15068 4.567558 CTGAAACAGAAAAGCACATTGCAA 59.432 37.500 0.00 0.00 38.78 4.08
3949 15069 4.114073 CTGAAACAGAAAAGCACATTGCA 58.886 39.130 0.22 0.00 38.78 4.08
3951 15071 4.935702 TCCTGAAACAGAAAAGCACATTG 58.064 39.130 0.00 0.00 32.44 2.82
3962 15082 3.325870 CGTACTGCAATCCTGAAACAGA 58.674 45.455 0.00 0.00 32.44 3.41
3981 15101 3.753294 TTTTCTCTGAAAGGAGAGCGT 57.247 42.857 0.00 0.00 42.37 5.07
4015 15230 6.826741 GGCTATGTACCAAATCCTAAGAACAA 59.173 38.462 0.00 0.00 0.00 2.83
4017 15232 6.354130 TGGCTATGTACCAAATCCTAAGAAC 58.646 40.000 0.00 0.00 33.12 3.01
4018 15233 6.409234 CCTGGCTATGTACCAAATCCTAAGAA 60.409 42.308 0.00 0.00 36.56 2.52
4019 15234 5.071788 CCTGGCTATGTACCAAATCCTAAGA 59.928 44.000 0.00 0.00 36.56 2.10
4020 15235 5.071788 TCCTGGCTATGTACCAAATCCTAAG 59.928 44.000 0.00 0.00 36.56 2.18
4021 15236 4.972568 TCCTGGCTATGTACCAAATCCTAA 59.027 41.667 0.00 0.00 36.56 2.69
4022 15237 4.562767 TCCTGGCTATGTACCAAATCCTA 58.437 43.478 0.00 0.00 36.56 2.94
4023 15238 3.393687 TCCTGGCTATGTACCAAATCCT 58.606 45.455 0.00 0.00 36.56 3.24
4024 15239 3.857157 TCCTGGCTATGTACCAAATCC 57.143 47.619 0.00 0.00 36.56 3.01
4025 15240 6.513393 CGAAAATCCTGGCTATGTACCAAATC 60.513 42.308 0.00 0.00 36.56 2.17
4026 15241 5.299279 CGAAAATCCTGGCTATGTACCAAAT 59.701 40.000 0.00 0.00 36.56 2.32
4027 15242 4.638421 CGAAAATCCTGGCTATGTACCAAA 59.362 41.667 0.00 0.00 36.56 3.28
4028 15243 4.196193 CGAAAATCCTGGCTATGTACCAA 58.804 43.478 0.00 0.00 36.56 3.67
4029 15244 3.433031 CCGAAAATCCTGGCTATGTACCA 60.433 47.826 0.00 0.00 35.40 3.25
4030 15245 3.139077 CCGAAAATCCTGGCTATGTACC 58.861 50.000 0.00 0.00 0.00 3.34
4031 15246 3.805207 ACCGAAAATCCTGGCTATGTAC 58.195 45.455 0.00 0.00 0.00 2.90
4032 15247 3.709653 AGACCGAAAATCCTGGCTATGTA 59.290 43.478 0.00 0.00 0.00 2.29
4033 15248 2.505819 AGACCGAAAATCCTGGCTATGT 59.494 45.455 0.00 0.00 0.00 2.29
4034 15249 3.199880 AGACCGAAAATCCTGGCTATG 57.800 47.619 0.00 0.00 0.00 2.23
4035 15250 3.054361 ACAAGACCGAAAATCCTGGCTAT 60.054 43.478 0.00 0.00 0.00 2.97
4036 15251 2.304761 ACAAGACCGAAAATCCTGGCTA 59.695 45.455 0.00 0.00 0.00 3.93
4037 15252 1.073923 ACAAGACCGAAAATCCTGGCT 59.926 47.619 0.00 0.00 0.00 4.75
4038 15253 1.534729 ACAAGACCGAAAATCCTGGC 58.465 50.000 0.00 0.00 0.00 4.85
4039 15254 3.568007 TCAAACAAGACCGAAAATCCTGG 59.432 43.478 0.00 0.00 0.00 4.45
4040 15255 4.275936 ACTCAAACAAGACCGAAAATCCTG 59.724 41.667 0.00 0.00 0.00 3.86
4041 15256 4.461198 ACTCAAACAAGACCGAAAATCCT 58.539 39.130 0.00 0.00 0.00 3.24
4042 15257 4.274950 TGACTCAAACAAGACCGAAAATCC 59.725 41.667 0.00 0.00 0.00 3.01
4043 15258 5.418310 TGACTCAAACAAGACCGAAAATC 57.582 39.130 0.00 0.00 0.00 2.17
4044 15259 4.261197 GCTGACTCAAACAAGACCGAAAAT 60.261 41.667 0.00 0.00 0.00 1.82
4045 15260 3.064820 GCTGACTCAAACAAGACCGAAAA 59.935 43.478 0.00 0.00 0.00 2.29
4046 15261 2.612212 GCTGACTCAAACAAGACCGAAA 59.388 45.455 0.00 0.00 0.00 3.46
4047 15262 2.158957 AGCTGACTCAAACAAGACCGAA 60.159 45.455 0.00 0.00 0.00 4.30
4048 15263 1.412710 AGCTGACTCAAACAAGACCGA 59.587 47.619 0.00 0.00 0.00 4.69
4049 15264 1.528586 CAGCTGACTCAAACAAGACCG 59.471 52.381 8.42 0.00 0.00 4.79
4193 15411 5.769662 ACAATCTAACCATGAGCACAAAGAA 59.230 36.000 0.00 0.00 0.00 2.52
4243 15461 2.933260 GCTAGCTGCTTCCTACTTGTTC 59.067 50.000 7.79 0.00 38.95 3.18
4245 15463 1.208293 GGCTAGCTGCTTCCTACTTGT 59.792 52.381 15.72 0.00 42.39 3.16
4246 15464 1.208052 TGGCTAGCTGCTTCCTACTTG 59.792 52.381 15.72 0.00 42.39 3.16
4247 15465 1.208293 GTGGCTAGCTGCTTCCTACTT 59.792 52.381 15.72 0.00 42.39 2.24
4249 15467 0.537188 TGTGGCTAGCTGCTTCCTAC 59.463 55.000 15.72 8.05 42.39 3.18
4250 15468 0.537188 GTGTGGCTAGCTGCTTCCTA 59.463 55.000 15.72 1.26 42.39 2.94
4251 15469 1.298014 GTGTGGCTAGCTGCTTCCT 59.702 57.895 15.72 0.00 42.39 3.36
4252 15470 1.003355 TGTGTGGCTAGCTGCTTCC 60.003 57.895 15.72 10.53 42.39 3.46
4253 15471 0.603707 TGTGTGTGGCTAGCTGCTTC 60.604 55.000 15.72 0.00 42.39 3.86
4254 15472 0.886490 GTGTGTGTGGCTAGCTGCTT 60.886 55.000 15.72 0.00 42.39 3.91
4255 15473 1.302033 GTGTGTGTGGCTAGCTGCT 60.302 57.895 15.72 7.57 42.39 4.24
4256 15474 1.597854 TGTGTGTGTGGCTAGCTGC 60.598 57.895 15.72 8.34 41.94 5.25
4257 15475 0.532640 TGTGTGTGTGTGGCTAGCTG 60.533 55.000 15.72 0.00 0.00 4.24
4258 15476 0.532862 GTGTGTGTGTGTGGCTAGCT 60.533 55.000 15.72 0.00 0.00 3.32
4259 15477 0.813610 TGTGTGTGTGTGTGGCTAGC 60.814 55.000 6.04 6.04 0.00 3.42
4260 15478 0.937304 GTGTGTGTGTGTGTGGCTAG 59.063 55.000 0.00 0.00 0.00 3.42
4261 15479 0.808060 CGTGTGTGTGTGTGTGGCTA 60.808 55.000 0.00 0.00 0.00 3.93
4262 15480 2.106074 CGTGTGTGTGTGTGTGGCT 61.106 57.895 0.00 0.00 0.00 4.75
4263 15481 2.403186 CGTGTGTGTGTGTGTGGC 59.597 61.111 0.00 0.00 0.00 5.01
4265 15483 1.225991 GTGCGTGTGTGTGTGTGTG 60.226 57.895 0.00 0.00 0.00 3.82
4266 15484 1.669437 TGTGCGTGTGTGTGTGTGT 60.669 52.632 0.00 0.00 0.00 3.72
4267 15485 1.225991 GTGTGCGTGTGTGTGTGTG 60.226 57.895 0.00 0.00 0.00 3.82
4273 15491 1.225991 GTGTGTGTGTGCGTGTGTG 60.226 57.895 0.00 0.00 0.00 3.82
4274 15492 1.669437 TGTGTGTGTGTGCGTGTGT 60.669 52.632 0.00 0.00 0.00 3.72
4275 15493 1.225991 GTGTGTGTGTGTGCGTGTG 60.226 57.895 0.00 0.00 0.00 3.82
4276 15494 1.669437 TGTGTGTGTGTGTGCGTGT 60.669 52.632 0.00 0.00 0.00 4.49
4277 15495 1.225991 GTGTGTGTGTGTGTGCGTG 60.226 57.895 0.00 0.00 0.00 5.34
4278 15496 1.669437 TGTGTGTGTGTGTGTGCGT 60.669 52.632 0.00 0.00 0.00 5.24
4279 15497 1.225991 GTGTGTGTGTGTGTGTGCG 60.226 57.895 0.00 0.00 0.00 5.34
4280 15498 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
4281 15499 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4282 15500 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4283 15501 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4284 15502 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4285 15503 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4289 15507 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4291 15509 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4292 15510 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4293 15511 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4294 15512 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4295 15513 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4296 15514 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4297 15515 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4299 15517 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4300 15518 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4301 15519 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4303 15521 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4304 15522 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
4305 15523 2.675348 TGTATGTGTGTGTGTGTGTGTG 59.325 45.455 0.00 0.00 0.00 3.82
4306 15524 2.935849 CTGTATGTGTGTGTGTGTGTGT 59.064 45.455 0.00 0.00 0.00 3.72
4307 15525 2.287644 CCTGTATGTGTGTGTGTGTGTG 59.712 50.000 0.00 0.00 0.00 3.82
4308 15526 2.560504 CCTGTATGTGTGTGTGTGTGT 58.439 47.619 0.00 0.00 0.00 3.72
4309 15527 1.264020 GCCTGTATGTGTGTGTGTGTG 59.736 52.381 0.00 0.00 0.00 3.82
4310 15528 1.134250 TGCCTGTATGTGTGTGTGTGT 60.134 47.619 0.00 0.00 0.00 3.72
4311 15529 1.264020 GTGCCTGTATGTGTGTGTGTG 59.736 52.381 0.00 0.00 0.00 3.82
4313 15531 1.264020 GTGTGCCTGTATGTGTGTGTG 59.736 52.381 0.00 0.00 0.00 3.82
4314 15532 1.134250 TGTGTGCCTGTATGTGTGTGT 60.134 47.619 0.00 0.00 0.00 3.72
4315 15533 1.592064 TGTGTGCCTGTATGTGTGTG 58.408 50.000 0.00 0.00 0.00 3.82
4317 15535 3.333804 TGTATGTGTGCCTGTATGTGTG 58.666 45.455 0.00 0.00 0.00 3.82
4318 15536 3.694043 TGTATGTGTGCCTGTATGTGT 57.306 42.857 0.00 0.00 0.00 3.72
4319 15537 5.115480 TGTATGTATGTGTGCCTGTATGTG 58.885 41.667 0.00 0.00 0.00 3.21
4322 15540 7.061566 TGTATGTATGTATGTGTGCCTGTAT 57.938 36.000 0.00 0.00 0.00 2.29
4323 15541 6.472686 TGTATGTATGTATGTGTGCCTGTA 57.527 37.500 0.00 0.00 0.00 2.74
4324 15542 5.351948 TGTATGTATGTATGTGTGCCTGT 57.648 39.130 0.00 0.00 0.00 4.00
4325 15543 8.037166 AGATATGTATGTATGTATGTGTGCCTG 58.963 37.037 0.00 0.00 0.00 4.85
4326 15544 8.138928 AGATATGTATGTATGTATGTGTGCCT 57.861 34.615 0.00 0.00 0.00 4.75
4327 15545 8.034804 TGAGATATGTATGTATGTATGTGTGCC 58.965 37.037 0.00 0.00 0.00 5.01
4328 15546 8.986477 TGAGATATGTATGTATGTATGTGTGC 57.014 34.615 0.00 0.00 0.00 4.57
4330 15548 9.645059 GCTTGAGATATGTATGTATGTATGTGT 57.355 33.333 0.00 0.00 0.00 3.72
4336 15554 9.033711 AGATCAGCTTGAGATATGTATGTATGT 57.966 33.333 0.00 0.00 0.00 2.29
4338 15556 9.252635 TCAGATCAGCTTGAGATATGTATGTAT 57.747 33.333 6.95 0.00 36.41 2.29
4339 15557 8.641498 TCAGATCAGCTTGAGATATGTATGTA 57.359 34.615 6.95 0.00 36.41 2.29
4341 15559 7.604549 ACTCAGATCAGCTTGAGATATGTATG 58.395 38.462 17.92 7.63 36.41 2.39
4342 15560 7.779754 ACTCAGATCAGCTTGAGATATGTAT 57.220 36.000 17.92 1.50 36.41 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.