Multiple sequence alignment - TraesCS6D01G044800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G044800 chr6D 100.000 2448 0 0 1 2448 20119816 20122263 0.000000e+00 4521.0
1 TraesCS6D01G044800 chr6D 100.000 235 0 0 2720 2954 20122535 20122769 4.520000e-118 435.0
2 TraesCS6D01G044800 chr6B 93.309 1614 79 12 573 2176 34093018 34094612 0.000000e+00 2355.0
3 TraesCS6D01G044800 chr6A 93.641 1148 55 7 538 1673 20162930 20164071 0.000000e+00 1700.0
4 TraesCS6D01G044800 chr6A 91.623 382 28 4 1796 2174 20164299 20164679 2.610000e-145 525.0
5 TraesCS6D01G044800 chr6A 89.219 269 22 5 2184 2448 20171217 20171482 2.190000e-86 329.0
6 TraesCS6D01G044800 chr4D 99.072 539 4 1 1 538 355864840 355864302 0.000000e+00 966.0
7 TraesCS6D01G044800 chr4D 83.178 107 17 1 2098 2203 490523569 490523675 2.420000e-16 97.1
8 TraesCS6D01G044800 chr3D 99.071 538 5 0 1 538 580567166 580566629 0.000000e+00 966.0
9 TraesCS6D01G044800 chr3D 82.828 99 14 3 2101 2197 39590397 39590300 5.250000e-13 86.1
10 TraesCS6D01G044800 chr2D 99.072 539 4 1 1 538 21291035 21290497 0.000000e+00 966.0
11 TraesCS6D01G044800 chr2D 98.706 541 6 1 1 540 468949185 468949725 0.000000e+00 959.0
12 TraesCS6D01G044800 chr2D 98.516 539 7 1 1 538 37086529 37087067 0.000000e+00 950.0
13 TraesCS6D01G044800 chr7D 99.071 538 4 1 1 537 587990050 587990587 0.000000e+00 965.0
14 TraesCS6D01G044800 chr7D 98.887 539 4 1 1 537 32445014 32445552 0.000000e+00 961.0
15 TraesCS6D01G044800 chr5D 98.891 541 5 1 1 540 398312177 398311637 0.000000e+00 965.0
16 TraesCS6D01G044800 chr5D 98.706 541 5 1 1 539 557621109 557621649 0.000000e+00 959.0
17 TraesCS6D01G044800 chr5B 87.129 101 13 0 2097 2197 24283112 24283012 6.690000e-22 115.0
18 TraesCS6D01G044800 chr4B 84.694 98 15 0 2100 2197 534799694 534799597 6.740000e-17 99.0
19 TraesCS6D01G044800 chr4B 84.536 97 15 0 2101 2197 232098794 232098698 2.420000e-16 97.1
20 TraesCS6D01G044800 chr4B 83.000 100 17 0 2098 2197 630317822 630317921 1.130000e-14 91.6
21 TraesCS6D01G044800 chr3B 82.828 99 13 4 2101 2197 224513588 224513684 5.250000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G044800 chr6D 20119816 20122769 2953 False 2478.0 4521 100.000 1 2954 2 chr6D.!!$F1 2953
1 TraesCS6D01G044800 chr6B 34093018 34094612 1594 False 2355.0 2355 93.309 573 2176 1 chr6B.!!$F1 1603
2 TraesCS6D01G044800 chr6A 20162930 20164679 1749 False 1112.5 1700 92.632 538 2174 2 chr6A.!!$F2 1636
3 TraesCS6D01G044800 chr4D 355864302 355864840 538 True 966.0 966 99.072 1 538 1 chr4D.!!$R1 537
4 TraesCS6D01G044800 chr3D 580566629 580567166 537 True 966.0 966 99.071 1 538 1 chr3D.!!$R2 537
5 TraesCS6D01G044800 chr2D 21290497 21291035 538 True 966.0 966 99.072 1 538 1 chr2D.!!$R1 537
6 TraesCS6D01G044800 chr2D 468949185 468949725 540 False 959.0 959 98.706 1 540 1 chr2D.!!$F2 539
7 TraesCS6D01G044800 chr2D 37086529 37087067 538 False 950.0 950 98.516 1 538 1 chr2D.!!$F1 537
8 TraesCS6D01G044800 chr7D 587990050 587990587 537 False 965.0 965 99.071 1 537 1 chr7D.!!$F2 536
9 TraesCS6D01G044800 chr7D 32445014 32445552 538 False 961.0 961 98.887 1 537 1 chr7D.!!$F1 536
10 TraesCS6D01G044800 chr5D 398311637 398312177 540 True 965.0 965 98.891 1 540 1 chr5D.!!$R1 539
11 TraesCS6D01G044800 chr5D 557621109 557621649 540 False 959.0 959 98.706 1 539 1 chr5D.!!$F1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
716 721 0.400213 TGGCAAGTCCAACTACCCTG 59.6 55.0 0.0 0.0 43.21 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2325 2488 0.03467 GGGTCTGCTTTGGAGATGCT 60.035 55.0 0.0 0.0 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
478 481 3.384146 TCACGCATATTTAGTCCCGGTTA 59.616 43.478 0.00 0.00 0.00 2.85
547 550 7.546778 TTTTTCTACCAGTGAAATTTTTGGC 57.453 32.000 13.94 0.00 34.04 4.52
615 618 6.927381 CCCTAAAAATCATTGGATTCATGAGC 59.073 38.462 0.00 0.00 42.87 4.26
658 661 8.819974 GTGCTTAATCAATTTCATATTGTTGGG 58.180 33.333 0.00 0.00 0.00 4.12
700 703 9.476202 GTCCCACAGATTATTATTTTTATTGGC 57.524 33.333 0.00 0.00 0.00 4.52
716 721 0.400213 TGGCAAGTCCAACTACCCTG 59.600 55.000 0.00 0.00 43.21 4.45
866 878 8.915057 AGTATATGCTTGCTGTTGAGATAATT 57.085 30.769 0.00 0.00 0.00 1.40
927 939 1.341089 GGATTCTTTGACCCCCTGTCC 60.341 57.143 0.00 0.00 43.78 4.02
972 984 4.462132 CACATCCATCCTCGATCTACTGAT 59.538 45.833 0.00 0.00 35.26 2.90
1137 1149 4.363990 AGCCAGTGCGTCCACGAG 62.364 66.667 2.58 0.00 46.62 4.18
1203 1215 5.615925 ACAACTCCTTCAAGTAAGTCAGT 57.384 39.130 0.00 0.00 32.89 3.41
1273 1289 5.292765 AGTACGATTCTTGATGCAGGTATG 58.707 41.667 0.00 0.00 0.00 2.39
1599 1615 1.092348 GGCACATCCCCGTAAGTTTC 58.908 55.000 0.00 0.00 0.00 2.78
1688 1800 0.515564 CCAAGTGTTAGGCCGAAACG 59.484 55.000 16.27 5.10 0.00 3.60
1699 1811 2.980562 CCGAAACGGCCAATATCGA 58.019 52.632 16.10 0.00 41.17 3.59
1700 1812 0.859232 CCGAAACGGCCAATATCGAG 59.141 55.000 16.10 5.46 41.17 4.04
1702 1814 1.521423 CGAAACGGCCAATATCGAGAC 59.479 52.381 2.24 0.00 35.65 3.36
1709 1869 2.028930 GGCCAATATCGAGACCACCTAG 60.029 54.545 0.00 0.00 0.00 3.02
1714 1874 0.820074 ATCGAGACCACCTAGCGGAG 60.820 60.000 3.58 0.00 0.00 4.63
1743 1903 1.270826 GGAGAAGAAAAACAGCCCTGC 59.729 52.381 0.00 0.00 0.00 4.85
1744 1904 1.956477 GAGAAGAAAAACAGCCCTGCA 59.044 47.619 0.00 0.00 0.00 4.41
1745 1905 1.683385 AGAAGAAAAACAGCCCTGCAC 59.317 47.619 0.00 0.00 0.00 4.57
1746 1906 0.752658 AAGAAAAACAGCCCTGCACC 59.247 50.000 0.00 0.00 0.00 5.01
1747 1907 1.115326 AGAAAAACAGCCCTGCACCC 61.115 55.000 0.00 0.00 0.00 4.61
1748 1908 2.099652 GAAAAACAGCCCTGCACCCC 62.100 60.000 0.00 0.00 0.00 4.95
1767 1927 2.037208 ACAGAAATTGGGGCCCCG 59.963 61.111 36.00 21.68 39.42 5.73
1768 1928 2.358619 CAGAAATTGGGGCCCCGA 59.641 61.111 34.27 34.27 39.42 5.14
1769 1929 1.076044 CAGAAATTGGGGCCCCGAT 60.076 57.895 35.53 35.53 41.81 4.18
1770 1930 1.076044 AGAAATTGGGGCCCCGATG 60.076 57.895 40.12 0.00 39.99 3.84
1771 1931 2.763710 AAATTGGGGCCCCGATGC 60.764 61.111 40.12 16.32 39.99 3.91
2086 2248 3.857093 CCAATTAAAGGACCGATTTTGCG 59.143 43.478 0.00 0.00 0.00 4.85
2148 2311 7.117236 TCCACGTATTAGATTTGTGTCAAGTTC 59.883 37.037 0.00 0.00 0.00 3.01
2160 2323 9.651913 ATTTGTGTCAAGTTCAACTTTGTAAAT 57.348 25.926 0.00 1.78 36.03 1.40
2210 2373 9.890629 ATATAAACATCTATACAATGCCGTCAT 57.109 29.630 0.00 0.00 33.53 3.06
2211 2374 6.942532 AAACATCTATACAATGCCGTCATT 57.057 33.333 0.00 0.00 43.31 2.57
2212 2375 9.719355 ATAAACATCTATACAATGCCGTCATTA 57.281 29.630 0.00 0.00 40.74 1.90
2213 2376 7.421530 AACATCTATACAATGCCGTCATTAC 57.578 36.000 0.00 0.00 40.74 1.89
2214 2377 6.759272 ACATCTATACAATGCCGTCATTACT 58.241 36.000 0.00 0.00 40.74 2.24
2215 2378 7.892609 ACATCTATACAATGCCGTCATTACTA 58.107 34.615 0.00 0.00 40.74 1.82
2216 2379 8.364894 ACATCTATACAATGCCGTCATTACTAA 58.635 33.333 0.00 0.00 40.74 2.24
2217 2380 9.203421 CATCTATACAATGCCGTCATTACTAAA 57.797 33.333 0.00 0.00 40.74 1.85
2218 2381 9.772973 ATCTATACAATGCCGTCATTACTAAAA 57.227 29.630 0.00 0.00 40.74 1.52
2219 2382 9.602568 TCTATACAATGCCGTCATTACTAAAAA 57.397 29.630 0.00 0.00 40.74 1.94
2223 2386 8.276252 ACAATGCCGTCATTACTAAAAATAGT 57.724 30.769 0.00 0.00 40.74 2.12
2224 2387 8.181573 ACAATGCCGTCATTACTAAAAATAGTG 58.818 33.333 0.00 0.00 40.74 2.74
2225 2388 8.394877 CAATGCCGTCATTACTAAAAATAGTGA 58.605 33.333 0.00 0.00 40.74 3.41
2226 2389 7.908827 TGCCGTCATTACTAAAAATAGTGAA 57.091 32.000 0.00 0.00 0.00 3.18
2227 2390 8.500753 TGCCGTCATTACTAAAAATAGTGAAT 57.499 30.769 0.00 0.00 0.00 2.57
2228 2391 8.394877 TGCCGTCATTACTAAAAATAGTGAATG 58.605 33.333 0.00 5.70 0.00 2.67
2229 2392 7.376072 GCCGTCATTACTAAAAATAGTGAATGC 59.624 37.037 0.00 0.00 0.00 3.56
2230 2393 8.394877 CCGTCATTACTAAAAATAGTGAATGCA 58.605 33.333 0.00 0.00 0.00 3.96
2231 2394 9.425893 CGTCATTACTAAAAATAGTGAATGCAG 57.574 33.333 0.00 0.00 0.00 4.41
2238 2401 9.331282 ACTAAAAATAGTGAATGCAGATAGGAC 57.669 33.333 0.00 0.00 0.00 3.85
2239 2402 9.553064 CTAAAAATAGTGAATGCAGATAGGACT 57.447 33.333 0.00 0.00 0.00 3.85
2240 2403 8.814038 AAAAATAGTGAATGCAGATAGGACTT 57.186 30.769 0.00 0.00 0.00 3.01
2241 2404 8.814038 AAAATAGTGAATGCAGATAGGACTTT 57.186 30.769 0.00 0.00 0.00 2.66
2242 2405 8.814038 AAATAGTGAATGCAGATAGGACTTTT 57.186 30.769 0.00 0.00 0.00 2.27
2243 2406 8.443953 AATAGTGAATGCAGATAGGACTTTTC 57.556 34.615 0.00 0.00 0.00 2.29
2244 2407 5.189180 AGTGAATGCAGATAGGACTTTTCC 58.811 41.667 0.00 0.00 43.22 3.13
2245 2408 4.943705 GTGAATGCAGATAGGACTTTTCCA 59.056 41.667 0.00 0.00 45.72 3.53
2246 2409 5.415701 GTGAATGCAGATAGGACTTTTCCAA 59.584 40.000 0.00 0.00 45.72 3.53
2247 2410 6.009589 TGAATGCAGATAGGACTTTTCCAAA 58.990 36.000 0.00 0.00 45.72 3.28
2248 2411 6.664816 TGAATGCAGATAGGACTTTTCCAAAT 59.335 34.615 0.00 0.00 45.72 2.32
2249 2412 5.902613 TGCAGATAGGACTTTTCCAAATG 57.097 39.130 0.00 0.00 45.72 2.32
2250 2413 4.706476 TGCAGATAGGACTTTTCCAAATGG 59.294 41.667 0.00 0.00 45.72 3.16
2251 2414 4.098501 GCAGATAGGACTTTTCCAAATGGG 59.901 45.833 0.00 0.00 45.72 4.00
2252 2415 4.646492 CAGATAGGACTTTTCCAAATGGGG 59.354 45.833 0.00 0.00 45.72 4.96
2253 2416 1.644509 AGGACTTTTCCAAATGGGGC 58.355 50.000 0.00 0.00 45.72 5.80
2254 2417 1.149923 AGGACTTTTCCAAATGGGGCT 59.850 47.619 0.00 0.00 45.72 5.19
2255 2418 1.977854 GGACTTTTCCAAATGGGGCTT 59.022 47.619 0.00 0.00 42.30 4.35
2256 2419 2.289631 GGACTTTTCCAAATGGGGCTTG 60.290 50.000 0.00 0.00 42.30 4.01
2257 2420 1.072173 ACTTTTCCAAATGGGGCTTGC 59.928 47.619 0.00 0.00 37.22 4.01
2258 2421 0.399833 TTTTCCAAATGGGGCTTGCC 59.600 50.000 2.49 2.49 37.22 4.52
2259 2422 1.825281 TTTCCAAATGGGGCTTGCCG 61.825 55.000 5.49 0.00 37.22 5.69
2260 2423 2.679642 CCAAATGGGGCTTGCCGA 60.680 61.111 5.49 0.00 0.00 5.54
2261 2424 2.713967 CCAAATGGGGCTTGCCGAG 61.714 63.158 5.49 0.00 0.00 4.63
2262 2425 1.978617 CAAATGGGGCTTGCCGAGT 60.979 57.895 5.49 0.00 0.00 4.18
2263 2426 1.228862 AAATGGGGCTTGCCGAGTT 60.229 52.632 5.49 0.00 0.00 3.01
2264 2427 1.250840 AAATGGGGCTTGCCGAGTTC 61.251 55.000 5.49 0.00 0.00 3.01
2265 2428 3.645268 ATGGGGCTTGCCGAGTTCC 62.645 63.158 5.49 1.47 0.00 3.62
2267 2430 4.035102 GGGCTTGCCGAGTTCCCT 62.035 66.667 5.49 0.00 34.19 4.20
2268 2431 2.747855 GGCTTGCCGAGTTCCCTG 60.748 66.667 0.00 0.00 0.00 4.45
2269 2432 2.032681 GCTTGCCGAGTTCCCTGT 59.967 61.111 0.00 0.00 0.00 4.00
2270 2433 2.328099 GCTTGCCGAGTTCCCTGTG 61.328 63.158 0.00 0.00 0.00 3.66
2271 2434 2.281484 TTGCCGAGTTCCCTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
2272 2435 3.113514 TTGCCGAGTTCCCTGTGCA 62.114 57.895 0.00 0.00 0.00 4.57
2273 2436 3.050275 GCCGAGTTCCCTGTGCAC 61.050 66.667 10.75 10.75 0.00 4.57
2274 2437 2.743718 CCGAGTTCCCTGTGCACT 59.256 61.111 19.41 0.00 0.00 4.40
2275 2438 1.374758 CCGAGTTCCCTGTGCACTC 60.375 63.158 19.41 4.09 34.68 3.51
2276 2439 1.367471 CGAGTTCCCTGTGCACTCA 59.633 57.895 19.41 0.00 37.40 3.41
2277 2440 0.036952 CGAGTTCCCTGTGCACTCAT 60.037 55.000 19.41 0.00 37.40 2.90
2278 2441 1.609061 CGAGTTCCCTGTGCACTCATT 60.609 52.381 19.41 0.00 37.40 2.57
2279 2442 2.353704 CGAGTTCCCTGTGCACTCATTA 60.354 50.000 19.41 0.00 37.40 1.90
2280 2443 3.003480 GAGTTCCCTGTGCACTCATTAC 58.997 50.000 19.41 10.66 37.48 1.89
2281 2444 2.639839 AGTTCCCTGTGCACTCATTACT 59.360 45.455 19.41 12.69 0.00 2.24
2282 2445 3.838317 AGTTCCCTGTGCACTCATTACTA 59.162 43.478 19.41 0.00 0.00 1.82
2283 2446 4.286032 AGTTCCCTGTGCACTCATTACTAA 59.714 41.667 19.41 0.00 0.00 2.24
2284 2447 4.901197 TCCCTGTGCACTCATTACTAAA 57.099 40.909 19.41 0.00 0.00 1.85
2285 2448 5.435686 TCCCTGTGCACTCATTACTAAAT 57.564 39.130 19.41 0.00 0.00 1.40
2286 2449 5.815581 TCCCTGTGCACTCATTACTAAATT 58.184 37.500 19.41 0.00 0.00 1.82
2287 2450 6.245408 TCCCTGTGCACTCATTACTAAATTT 58.755 36.000 19.41 0.00 0.00 1.82
2288 2451 6.150976 TCCCTGTGCACTCATTACTAAATTTG 59.849 38.462 19.41 0.00 0.00 2.32
2289 2452 5.801947 CCTGTGCACTCATTACTAAATTTGC 59.198 40.000 19.41 0.00 0.00 3.68
2290 2453 6.324561 TGTGCACTCATTACTAAATTTGCA 57.675 33.333 19.41 0.00 33.48 4.08
2291 2454 6.743110 TGTGCACTCATTACTAAATTTGCAA 58.257 32.000 19.41 0.00 35.82 4.08
2292 2455 6.862608 TGTGCACTCATTACTAAATTTGCAAG 59.137 34.615 19.41 0.00 35.82 4.01
2293 2456 6.863126 GTGCACTCATTACTAAATTTGCAAGT 59.137 34.615 10.32 0.00 35.82 3.16
2294 2457 7.061094 GTGCACTCATTACTAAATTTGCAAGTC 59.939 37.037 10.32 0.00 35.82 3.01
2295 2458 6.249260 GCACTCATTACTAAATTTGCAAGTCG 59.751 38.462 0.00 0.00 0.00 4.18
2296 2459 6.742718 CACTCATTACTAAATTTGCAAGTCGG 59.257 38.462 0.00 0.00 0.00 4.79
2297 2460 6.653320 ACTCATTACTAAATTTGCAAGTCGGA 59.347 34.615 0.00 0.00 0.00 4.55
2298 2461 7.072177 TCATTACTAAATTTGCAAGTCGGAG 57.928 36.000 0.00 0.00 0.00 4.63
2299 2462 6.876789 TCATTACTAAATTTGCAAGTCGGAGA 59.123 34.615 0.00 0.00 0.00 3.71
2300 2463 7.552687 TCATTACTAAATTTGCAAGTCGGAGAT 59.447 33.333 0.00 0.00 40.67 2.75
2301 2464 5.803020 ACTAAATTTGCAAGTCGGAGATC 57.197 39.130 0.00 0.00 40.67 2.75
2302 2465 3.747099 AAATTTGCAAGTCGGAGATCG 57.253 42.857 0.00 0.00 40.67 3.69
2303 2466 2.672961 ATTTGCAAGTCGGAGATCGA 57.327 45.000 0.00 0.00 46.77 3.59
2312 2475 2.871182 TCGGAGATCGACAATTGGAG 57.129 50.000 10.83 3.21 43.74 3.86
2313 2476 2.100197 TCGGAGATCGACAATTGGAGT 58.900 47.619 10.83 0.00 43.74 3.85
2314 2477 3.284617 TCGGAGATCGACAATTGGAGTA 58.715 45.455 10.83 0.00 43.74 2.59
2315 2478 3.889538 TCGGAGATCGACAATTGGAGTAT 59.110 43.478 10.83 0.00 43.74 2.12
2316 2479 4.341235 TCGGAGATCGACAATTGGAGTATT 59.659 41.667 10.83 0.00 43.74 1.89
2317 2480 5.533528 TCGGAGATCGACAATTGGAGTATTA 59.466 40.000 10.83 0.00 43.74 0.98
2318 2481 6.040054 TCGGAGATCGACAATTGGAGTATTAA 59.960 38.462 10.83 0.00 43.74 1.40
2319 2482 6.363626 CGGAGATCGACAATTGGAGTATTAAG 59.636 42.308 10.83 0.00 42.43 1.85
2320 2483 6.647067 GGAGATCGACAATTGGAGTATTAAGG 59.353 42.308 10.83 0.00 0.00 2.69
2321 2484 7.125792 AGATCGACAATTGGAGTATTAAGGT 57.874 36.000 10.83 0.00 0.00 3.50
2322 2485 7.565680 AGATCGACAATTGGAGTATTAAGGTT 58.434 34.615 10.83 0.00 0.00 3.50
2323 2486 8.701895 AGATCGACAATTGGAGTATTAAGGTTA 58.298 33.333 10.83 0.00 0.00 2.85
2324 2487 8.888579 ATCGACAATTGGAGTATTAAGGTTAG 57.111 34.615 10.83 0.00 0.00 2.34
2325 2488 8.070034 TCGACAATTGGAGTATTAAGGTTAGA 57.930 34.615 10.83 0.00 0.00 2.10
2326 2489 8.195436 TCGACAATTGGAGTATTAAGGTTAGAG 58.805 37.037 10.83 0.00 0.00 2.43
2327 2490 7.042658 CGACAATTGGAGTATTAAGGTTAGAGC 60.043 40.741 10.83 0.00 0.00 4.09
2328 2491 7.630082 ACAATTGGAGTATTAAGGTTAGAGCA 58.370 34.615 10.83 0.00 0.00 4.26
2329 2492 8.275040 ACAATTGGAGTATTAAGGTTAGAGCAT 58.725 33.333 10.83 0.00 0.00 3.79
2330 2493 8.778358 CAATTGGAGTATTAAGGTTAGAGCATC 58.222 37.037 0.00 0.00 0.00 3.91
2343 2506 1.377536 GAGCATCTCCAAAGCAGACC 58.622 55.000 0.00 0.00 0.00 3.85
2344 2507 0.034670 AGCATCTCCAAAGCAGACCC 60.035 55.000 0.00 0.00 0.00 4.46
2345 2508 0.034670 GCATCTCCAAAGCAGACCCT 60.035 55.000 0.00 0.00 0.00 4.34
2346 2509 2.016096 GCATCTCCAAAGCAGACCCTC 61.016 57.143 0.00 0.00 0.00 4.30
2347 2510 1.280133 CATCTCCAAAGCAGACCCTCA 59.720 52.381 0.00 0.00 0.00 3.86
2348 2511 1.434188 TCTCCAAAGCAGACCCTCAA 58.566 50.000 0.00 0.00 0.00 3.02
2349 2512 1.774254 TCTCCAAAGCAGACCCTCAAA 59.226 47.619 0.00 0.00 0.00 2.69
2350 2513 2.376518 TCTCCAAAGCAGACCCTCAAAT 59.623 45.455 0.00 0.00 0.00 2.32
2351 2514 2.751806 CTCCAAAGCAGACCCTCAAATC 59.248 50.000 0.00 0.00 0.00 2.17
2352 2515 1.470098 CCAAAGCAGACCCTCAAATCG 59.530 52.381 0.00 0.00 0.00 3.34
2353 2516 1.135575 CAAAGCAGACCCTCAAATCGC 60.136 52.381 0.00 0.00 0.00 4.58
2354 2517 0.678048 AAGCAGACCCTCAAATCGCC 60.678 55.000 0.00 0.00 0.00 5.54
2355 2518 2.115291 GCAGACCCTCAAATCGCCC 61.115 63.158 0.00 0.00 0.00 6.13
2356 2519 1.815421 CAGACCCTCAAATCGCCCG 60.815 63.158 0.00 0.00 0.00 6.13
2357 2520 3.202706 GACCCTCAAATCGCCCGC 61.203 66.667 0.00 0.00 0.00 6.13
2358 2521 3.969250 GACCCTCAAATCGCCCGCA 62.969 63.158 0.00 0.00 0.00 5.69
2359 2522 2.749839 CCCTCAAATCGCCCGCAA 60.750 61.111 0.00 0.00 0.00 4.85
2360 2523 2.339556 CCCTCAAATCGCCCGCAAA 61.340 57.895 0.00 0.00 0.00 3.68
2361 2524 1.154035 CCTCAAATCGCCCGCAAAC 60.154 57.895 0.00 0.00 0.00 2.93
2362 2525 1.511887 CTCAAATCGCCCGCAAACG 60.512 57.895 0.00 0.00 39.67 3.60
2363 2526 2.182614 CTCAAATCGCCCGCAAACGT 62.183 55.000 0.00 0.00 37.70 3.99
2364 2527 1.795962 CAAATCGCCCGCAAACGTC 60.796 57.895 0.00 0.00 37.70 4.34
2365 2528 2.973316 AAATCGCCCGCAAACGTCC 61.973 57.895 0.00 0.00 37.70 4.79
2366 2529 4.690719 ATCGCCCGCAAACGTCCA 62.691 61.111 0.00 0.00 37.70 4.02
2367 2530 4.912485 TCGCCCGCAAACGTCCAA 62.912 61.111 0.00 0.00 37.70 3.53
2368 2531 3.955101 CGCCCGCAAACGTCCAAA 61.955 61.111 0.00 0.00 37.70 3.28
2369 2532 2.354188 GCCCGCAAACGTCCAAAC 60.354 61.111 0.00 0.00 37.70 2.93
2370 2533 2.841160 GCCCGCAAACGTCCAAACT 61.841 57.895 0.00 0.00 37.70 2.66
2371 2534 1.008995 CCCGCAAACGTCCAAACTG 60.009 57.895 0.00 0.00 37.70 3.16
2372 2535 1.657181 CCGCAAACGTCCAAACTGC 60.657 57.895 0.00 0.00 37.70 4.40
2373 2536 3.902234 GCAAACGTCCAAACTGCG 58.098 55.556 0.00 0.00 0.00 5.18
2374 2537 1.063488 GCAAACGTCCAAACTGCGT 59.937 52.632 0.00 0.00 40.81 5.24
2376 2539 1.187715 CAAACGTCCAAACTGCGTTG 58.812 50.000 2.37 0.00 46.19 4.10
2377 2540 0.806241 AAACGTCCAAACTGCGTTGT 59.194 45.000 2.37 0.00 46.19 3.32
2378 2541 0.375803 AACGTCCAAACTGCGTTGTC 59.624 50.000 0.00 0.00 45.36 3.18
2379 2542 1.278637 CGTCCAAACTGCGTTGTCC 59.721 57.895 0.00 0.00 0.00 4.02
2380 2543 1.278637 GTCCAAACTGCGTTGTCCG 59.721 57.895 0.00 0.00 40.40 4.79
2381 2544 1.144276 TCCAAACTGCGTTGTCCGA 59.856 52.632 0.00 0.00 39.56 4.55
2382 2545 0.462225 TCCAAACTGCGTTGTCCGAA 60.462 50.000 0.00 0.00 39.56 4.30
2383 2546 0.591170 CCAAACTGCGTTGTCCGAAT 59.409 50.000 0.00 0.00 39.56 3.34
2384 2547 1.662876 CCAAACTGCGTTGTCCGAATG 60.663 52.381 0.00 0.00 39.56 2.67
2385 2548 0.040425 AAACTGCGTTGTCCGAATGC 60.040 50.000 0.00 0.00 39.56 3.56
2386 2549 1.163420 AACTGCGTTGTCCGAATGCA 61.163 50.000 0.00 0.00 39.59 3.96
2387 2550 3.252964 TGCGTTGTCCGAATGCAG 58.747 55.556 0.00 0.00 37.26 4.41
2388 2551 1.596752 TGCGTTGTCCGAATGCAGT 60.597 52.632 0.00 0.00 37.26 4.40
2389 2552 1.163420 TGCGTTGTCCGAATGCAGTT 61.163 50.000 0.00 0.00 37.26 3.16
2390 2553 0.793861 GCGTTGTCCGAATGCAGTTA 59.206 50.000 0.00 0.00 39.56 2.24
2391 2554 1.201921 GCGTTGTCCGAATGCAGTTAG 60.202 52.381 0.00 0.00 39.56 2.34
2392 2555 1.201921 CGTTGTCCGAATGCAGTTAGC 60.202 52.381 0.00 0.00 41.13 3.09
2393 2556 1.130561 GTTGTCCGAATGCAGTTAGCC 59.869 52.381 0.00 0.00 44.83 3.93
2394 2557 0.323302 TGTCCGAATGCAGTTAGCCA 59.677 50.000 0.00 0.00 44.83 4.75
2395 2558 1.065491 TGTCCGAATGCAGTTAGCCAT 60.065 47.619 0.00 0.00 44.83 4.40
2396 2559 1.599542 GTCCGAATGCAGTTAGCCATC 59.400 52.381 0.00 0.00 44.83 3.51
2397 2560 0.583438 CCGAATGCAGTTAGCCATCG 59.417 55.000 0.00 0.00 44.78 3.84
2398 2561 1.570813 CGAATGCAGTTAGCCATCGA 58.429 50.000 0.00 0.00 46.75 3.59
2399 2562 1.933181 CGAATGCAGTTAGCCATCGAA 59.067 47.619 0.00 0.00 46.75 3.71
2400 2563 2.285834 CGAATGCAGTTAGCCATCGAAC 60.286 50.000 0.00 0.00 46.75 3.95
2401 2564 1.290203 ATGCAGTTAGCCATCGAACG 58.710 50.000 0.00 0.00 44.83 3.95
2402 2565 0.037697 TGCAGTTAGCCATCGAACGT 60.038 50.000 0.00 0.00 44.83 3.99
2403 2566 0.645868 GCAGTTAGCCATCGAACGTC 59.354 55.000 0.00 0.00 37.23 4.34
2404 2567 0.914551 CAGTTAGCCATCGAACGTCG 59.085 55.000 0.00 0.00 42.10 5.12
2405 2568 0.524862 AGTTAGCCATCGAACGTCGT 59.475 50.000 0.00 0.00 41.35 4.34
2406 2569 0.912528 GTTAGCCATCGAACGTCGTC 59.087 55.000 0.00 0.00 41.35 4.20
2407 2570 0.521867 TTAGCCATCGAACGTCGTCG 60.522 55.000 0.00 3.24 41.35 5.12
2408 2571 2.908088 TAGCCATCGAACGTCGTCGC 62.908 60.000 4.78 6.44 41.35 5.19
2409 2572 3.245315 CCATCGAACGTCGTCGCC 61.245 66.667 4.78 0.00 41.35 5.54
2410 2573 3.245315 CATCGAACGTCGTCGCCC 61.245 66.667 4.78 0.00 41.35 6.13
2411 2574 3.740397 ATCGAACGTCGTCGCCCA 61.740 61.111 4.78 0.00 41.35 5.36
2412 2575 3.271706 ATCGAACGTCGTCGCCCAA 62.272 57.895 4.78 0.00 41.35 4.12
2413 2576 2.552585 ATCGAACGTCGTCGCCCAAT 62.553 55.000 4.78 0.00 41.35 3.16
2414 2577 1.514657 CGAACGTCGTCGCCCAATA 60.515 57.895 0.00 0.00 41.18 1.90
2415 2578 1.469126 CGAACGTCGTCGCCCAATAG 61.469 60.000 0.00 0.00 41.18 1.73
2416 2579 0.457337 GAACGTCGTCGCCCAATAGT 60.457 55.000 0.00 0.00 41.18 2.12
2417 2580 0.457337 AACGTCGTCGCCCAATAGTC 60.457 55.000 0.00 0.00 41.18 2.59
2418 2581 1.310933 ACGTCGTCGCCCAATAGTCT 61.311 55.000 0.99 0.00 41.18 3.24
2419 2582 0.866061 CGTCGTCGCCCAATAGTCTG 60.866 60.000 0.00 0.00 0.00 3.51
2420 2583 1.141019 TCGTCGCCCAATAGTCTGC 59.859 57.895 0.00 0.00 0.00 4.26
2421 2584 1.153647 CGTCGCCCAATAGTCTGCA 60.154 57.895 0.00 0.00 0.00 4.41
2422 2585 1.148157 CGTCGCCCAATAGTCTGCAG 61.148 60.000 7.63 7.63 0.00 4.41
2423 2586 0.175760 GTCGCCCAATAGTCTGCAGA 59.824 55.000 13.74 13.74 0.00 4.26
2424 2587 0.175760 TCGCCCAATAGTCTGCAGAC 59.824 55.000 34.82 34.82 45.08 3.51
2425 2588 0.811616 CGCCCAATAGTCTGCAGACC 60.812 60.000 37.09 21.62 45.85 3.85
2426 2589 0.253044 GCCCAATAGTCTGCAGACCA 59.747 55.000 37.09 28.14 45.85 4.02
2427 2590 1.340017 GCCCAATAGTCTGCAGACCAA 60.340 52.381 37.09 27.68 45.85 3.67
2428 2591 2.684927 GCCCAATAGTCTGCAGACCAAT 60.685 50.000 37.09 28.50 45.85 3.16
2429 2592 3.209410 CCCAATAGTCTGCAGACCAATC 58.791 50.000 37.09 17.23 45.85 2.67
2430 2593 3.209410 CCAATAGTCTGCAGACCAATCC 58.791 50.000 37.09 16.51 45.85 3.01
2431 2594 3.209410 CAATAGTCTGCAGACCAATCCC 58.791 50.000 37.09 15.79 45.85 3.85
2432 2595 1.951209 TAGTCTGCAGACCAATCCCA 58.049 50.000 37.09 15.06 45.85 4.37
2433 2596 1.293062 AGTCTGCAGACCAATCCCAT 58.707 50.000 37.09 17.79 45.85 4.00
2434 2597 1.637553 AGTCTGCAGACCAATCCCATT 59.362 47.619 37.09 17.09 45.85 3.16
2435 2598 2.846206 AGTCTGCAGACCAATCCCATTA 59.154 45.455 37.09 0.66 45.85 1.90
2436 2599 3.461085 AGTCTGCAGACCAATCCCATTAT 59.539 43.478 37.09 15.89 45.85 1.28
2437 2600 3.817647 GTCTGCAGACCAATCCCATTATC 59.182 47.826 32.55 5.54 39.07 1.75
2438 2601 3.152341 CTGCAGACCAATCCCATTATCC 58.848 50.000 8.42 0.00 0.00 2.59
2439 2602 2.154462 GCAGACCAATCCCATTATCCG 58.846 52.381 0.00 0.00 0.00 4.18
2440 2603 2.487265 GCAGACCAATCCCATTATCCGT 60.487 50.000 0.00 0.00 0.00 4.69
2441 2604 3.820557 CAGACCAATCCCATTATCCGTT 58.179 45.455 0.00 0.00 0.00 4.44
2442 2605 4.207165 CAGACCAATCCCATTATCCGTTT 58.793 43.478 0.00 0.00 0.00 3.60
2443 2606 4.644685 CAGACCAATCCCATTATCCGTTTT 59.355 41.667 0.00 0.00 0.00 2.43
2444 2607 5.127031 CAGACCAATCCCATTATCCGTTTTT 59.873 40.000 0.00 0.00 0.00 1.94
2738 2901 1.471119 CTAGACCGCCACCACTTAGA 58.529 55.000 0.00 0.00 0.00 2.10
2739 2902 1.822990 CTAGACCGCCACCACTTAGAA 59.177 52.381 0.00 0.00 0.00 2.10
2740 2903 0.320697 AGACCGCCACCACTTAGAAC 59.679 55.000 0.00 0.00 0.00 3.01
2741 2904 0.320697 GACCGCCACCACTTAGAACT 59.679 55.000 0.00 0.00 0.00 3.01
2742 2905 1.547372 GACCGCCACCACTTAGAACTA 59.453 52.381 0.00 0.00 0.00 2.24
2743 2906 1.274447 ACCGCCACCACTTAGAACTAC 59.726 52.381 0.00 0.00 0.00 2.73
2744 2907 1.625616 CGCCACCACTTAGAACTACG 58.374 55.000 0.00 0.00 0.00 3.51
2745 2908 1.200716 CGCCACCACTTAGAACTACGA 59.799 52.381 0.00 0.00 0.00 3.43
2746 2909 2.603953 GCCACCACTTAGAACTACGAC 58.396 52.381 0.00 0.00 0.00 4.34
2747 2910 2.029649 GCCACCACTTAGAACTACGACA 60.030 50.000 0.00 0.00 0.00 4.35
2748 2911 3.368116 GCCACCACTTAGAACTACGACAT 60.368 47.826 0.00 0.00 0.00 3.06
2749 2912 4.421948 CCACCACTTAGAACTACGACATC 58.578 47.826 0.00 0.00 0.00 3.06
2750 2913 4.082408 CCACCACTTAGAACTACGACATCA 60.082 45.833 0.00 0.00 0.00 3.07
2751 2914 4.857588 CACCACTTAGAACTACGACATCAC 59.142 45.833 0.00 0.00 0.00 3.06
2752 2915 4.082354 ACCACTTAGAACTACGACATCACC 60.082 45.833 0.00 0.00 0.00 4.02
2753 2916 4.096311 CACTTAGAACTACGACATCACCG 58.904 47.826 0.00 0.00 0.00 4.94
2754 2917 4.005650 ACTTAGAACTACGACATCACCGA 58.994 43.478 0.00 0.00 0.00 4.69
2755 2918 2.915738 AGAACTACGACATCACCGAC 57.084 50.000 0.00 0.00 0.00 4.79
2756 2919 1.471684 AGAACTACGACATCACCGACC 59.528 52.381 0.00 0.00 0.00 4.79
2757 2920 0.529378 AACTACGACATCACCGACCC 59.471 55.000 0.00 0.00 0.00 4.46
2758 2921 0.609957 ACTACGACATCACCGACCCA 60.610 55.000 0.00 0.00 0.00 4.51
2759 2922 0.744874 CTACGACATCACCGACCCAT 59.255 55.000 0.00 0.00 0.00 4.00
2760 2923 0.742505 TACGACATCACCGACCCATC 59.257 55.000 0.00 0.00 0.00 3.51
2761 2924 1.227263 CGACATCACCGACCCATCC 60.227 63.158 0.00 0.00 0.00 3.51
2762 2925 1.904771 GACATCACCGACCCATCCA 59.095 57.895 0.00 0.00 0.00 3.41
2763 2926 0.251916 GACATCACCGACCCATCCAA 59.748 55.000 0.00 0.00 0.00 3.53
2764 2927 0.695924 ACATCACCGACCCATCCAAA 59.304 50.000 0.00 0.00 0.00 3.28
2765 2928 1.074727 ACATCACCGACCCATCCAAAA 59.925 47.619 0.00 0.00 0.00 2.44
2766 2929 1.472480 CATCACCGACCCATCCAAAAC 59.528 52.381 0.00 0.00 0.00 2.43
2767 2930 0.250989 TCACCGACCCATCCAAAACC 60.251 55.000 0.00 0.00 0.00 3.27
2768 2931 1.076014 ACCGACCCATCCAAAACCC 59.924 57.895 0.00 0.00 0.00 4.11
2769 2932 1.680989 CCGACCCATCCAAAACCCC 60.681 63.158 0.00 0.00 0.00 4.95
2770 2933 1.075836 CGACCCATCCAAAACCCCA 59.924 57.895 0.00 0.00 0.00 4.96
2771 2934 1.248101 CGACCCATCCAAAACCCCAC 61.248 60.000 0.00 0.00 0.00 4.61
2772 2935 0.902984 GACCCATCCAAAACCCCACC 60.903 60.000 0.00 0.00 0.00 4.61
2773 2936 1.612146 CCCATCCAAAACCCCACCC 60.612 63.158 0.00 0.00 0.00 4.61
2774 2937 1.981853 CCATCCAAAACCCCACCCG 60.982 63.158 0.00 0.00 0.00 5.28
2775 2938 1.981853 CATCCAAAACCCCACCCGG 60.982 63.158 0.00 0.00 0.00 5.73
2790 2953 4.096003 CGGGCCCCACGTTCTCAT 62.096 66.667 18.66 0.00 0.00 2.90
2791 2954 2.124695 GGGCCCCACGTTCTCATC 60.125 66.667 12.23 0.00 0.00 2.92
2792 2955 2.124695 GGCCCCACGTTCTCATCC 60.125 66.667 0.00 0.00 0.00 3.51
2793 2956 2.511600 GCCCCACGTTCTCATCCG 60.512 66.667 0.00 0.00 0.00 4.18
2794 2957 3.014085 GCCCCACGTTCTCATCCGA 62.014 63.158 0.00 0.00 0.00 4.55
2795 2958 1.823295 CCCCACGTTCTCATCCGAT 59.177 57.895 0.00 0.00 0.00 4.18
2796 2959 0.249489 CCCCACGTTCTCATCCGATC 60.249 60.000 0.00 0.00 0.00 3.69
2797 2960 0.249489 CCCACGTTCTCATCCGATCC 60.249 60.000 0.00 0.00 0.00 3.36
2798 2961 0.249489 CCACGTTCTCATCCGATCCC 60.249 60.000 0.00 0.00 0.00 3.85
2799 2962 0.747255 CACGTTCTCATCCGATCCCT 59.253 55.000 0.00 0.00 0.00 4.20
2800 2963 1.033574 ACGTTCTCATCCGATCCCTC 58.966 55.000 0.00 0.00 0.00 4.30
2801 2964 1.323412 CGTTCTCATCCGATCCCTCT 58.677 55.000 0.00 0.00 0.00 3.69
2802 2965 1.683917 CGTTCTCATCCGATCCCTCTT 59.316 52.381 0.00 0.00 0.00 2.85
2803 2966 2.101582 CGTTCTCATCCGATCCCTCTTT 59.898 50.000 0.00 0.00 0.00 2.52
2804 2967 3.723260 GTTCTCATCCGATCCCTCTTTC 58.277 50.000 0.00 0.00 0.00 2.62
2805 2968 3.320610 TCTCATCCGATCCCTCTTTCT 57.679 47.619 0.00 0.00 0.00 2.52
2806 2969 3.226777 TCTCATCCGATCCCTCTTTCTC 58.773 50.000 0.00 0.00 0.00 2.87
2807 2970 3.117322 TCTCATCCGATCCCTCTTTCTCT 60.117 47.826 0.00 0.00 0.00 3.10
2808 2971 2.961741 TCATCCGATCCCTCTTTCTCTG 59.038 50.000 0.00 0.00 0.00 3.35
2809 2972 1.781786 TCCGATCCCTCTTTCTCTGG 58.218 55.000 0.00 0.00 0.00 3.86
2810 2973 1.288037 TCCGATCCCTCTTTCTCTGGA 59.712 52.381 0.00 0.00 0.00 3.86
2811 2974 2.091055 TCCGATCCCTCTTTCTCTGGAT 60.091 50.000 0.00 0.00 40.27 3.41
2812 2975 2.298729 CCGATCCCTCTTTCTCTGGATC 59.701 54.545 7.21 7.21 46.38 3.36
2813 2976 2.298729 CGATCCCTCTTTCTCTGGATCC 59.701 54.545 4.20 4.20 46.91 3.36
2814 2977 1.781786 TCCCTCTTTCTCTGGATCCG 58.218 55.000 7.39 2.06 0.00 4.18
2815 2978 0.105778 CCCTCTTTCTCTGGATCCGC 59.894 60.000 7.39 0.00 0.00 5.54
2816 2979 1.118838 CCTCTTTCTCTGGATCCGCT 58.881 55.000 7.39 0.00 0.00 5.52
2817 2980 1.484240 CCTCTTTCTCTGGATCCGCTT 59.516 52.381 7.39 0.00 0.00 4.68
2818 2981 2.093235 CCTCTTTCTCTGGATCCGCTTT 60.093 50.000 7.39 0.00 0.00 3.51
2819 2982 3.133003 CCTCTTTCTCTGGATCCGCTTTA 59.867 47.826 7.39 0.00 0.00 1.85
2820 2983 4.202305 CCTCTTTCTCTGGATCCGCTTTAT 60.202 45.833 7.39 0.00 0.00 1.40
2821 2984 4.950050 TCTTTCTCTGGATCCGCTTTATC 58.050 43.478 7.39 0.00 0.00 1.75
2822 2985 3.753294 TTCTCTGGATCCGCTTTATCC 57.247 47.619 7.39 0.00 42.84 2.59
2823 2986 1.971357 TCTCTGGATCCGCTTTATCCC 59.029 52.381 7.39 0.00 42.00 3.85
2824 2987 1.694150 CTCTGGATCCGCTTTATCCCA 59.306 52.381 7.39 0.00 42.00 4.37
2825 2988 1.416401 TCTGGATCCGCTTTATCCCAC 59.584 52.381 7.39 0.00 42.00 4.61
2826 2989 1.140852 CTGGATCCGCTTTATCCCACA 59.859 52.381 7.39 0.00 42.00 4.17
2827 2990 1.134220 TGGATCCGCTTTATCCCACAC 60.134 52.381 7.39 0.00 42.00 3.82
2828 2991 1.594331 GATCCGCTTTATCCCACACC 58.406 55.000 0.00 0.00 0.00 4.16
2829 2992 0.179056 ATCCGCTTTATCCCACACCG 60.179 55.000 0.00 0.00 0.00 4.94
2830 2993 2.469516 CCGCTTTATCCCACACCGC 61.470 63.158 0.00 0.00 0.00 5.68
2831 2994 2.469516 CGCTTTATCCCACACCGCC 61.470 63.158 0.00 0.00 0.00 6.13
2832 2995 1.377987 GCTTTATCCCACACCGCCA 60.378 57.895 0.00 0.00 0.00 5.69
2833 2996 1.654023 GCTTTATCCCACACCGCCAC 61.654 60.000 0.00 0.00 0.00 5.01
2834 2997 1.001887 TTTATCCCACACCGCCACC 60.002 57.895 0.00 0.00 0.00 4.61
2835 2998 2.806503 TTTATCCCACACCGCCACCG 62.807 60.000 0.00 0.00 0.00 4.94
2852 3015 3.917760 GCCGCGGCTCTACCATCT 61.918 66.667 41.71 0.00 39.03 2.90
2853 3016 2.336809 CCGCGGCTCTACCATCTC 59.663 66.667 14.67 0.00 39.03 2.75
2854 3017 2.050895 CGCGGCTCTACCATCTCG 60.051 66.667 0.00 0.00 39.03 4.04
2855 3018 2.336809 GCGGCTCTACCATCTCGG 59.663 66.667 0.00 0.00 39.03 4.63
2856 3019 2.336809 CGGCTCTACCATCTCGGC 59.663 66.667 0.00 0.00 39.03 5.54
2857 3020 2.196925 CGGCTCTACCATCTCGGCT 61.197 63.158 0.00 0.00 39.03 5.52
2858 3021 1.365633 GGCTCTACCATCTCGGCTG 59.634 63.158 0.00 0.00 39.03 4.85
2859 3022 1.300542 GCTCTACCATCTCGGCTGC 60.301 63.158 0.00 0.00 39.03 5.25
2860 3023 1.365633 CTCTACCATCTCGGCTGCC 59.634 63.158 9.11 9.11 39.03 4.85
2861 3024 1.075970 TCTACCATCTCGGCTGCCT 60.076 57.895 17.92 0.00 39.03 4.75
2862 3025 1.068753 CTACCATCTCGGCTGCCTG 59.931 63.158 17.92 10.52 39.03 4.85
2863 3026 2.985512 CTACCATCTCGGCTGCCTGC 62.986 65.000 17.92 0.00 39.03 4.85
2864 3027 4.172512 CCATCTCGGCTGCCTGCT 62.173 66.667 17.92 0.00 42.39 4.24
2865 3028 2.800541 CCATCTCGGCTGCCTGCTA 61.801 63.158 17.92 0.00 42.39 3.49
2866 3029 1.144716 CATCTCGGCTGCCTGCTAA 59.855 57.895 17.92 0.00 42.39 3.09
2867 3030 0.879400 CATCTCGGCTGCCTGCTAAG 60.879 60.000 17.92 6.36 42.39 2.18
2868 3031 2.657102 ATCTCGGCTGCCTGCTAAGC 62.657 60.000 17.92 0.00 42.39 3.09
2872 3035 2.044551 GCTGCCTGCTAAGCCCTT 60.045 61.111 0.00 0.00 38.95 3.95
2873 3036 2.117779 GCTGCCTGCTAAGCCCTTC 61.118 63.158 0.00 0.00 38.95 3.46
2874 3037 1.452833 CTGCCTGCTAAGCCCTTCC 60.453 63.158 0.00 0.00 0.00 3.46
2875 3038 1.919600 CTGCCTGCTAAGCCCTTCCT 61.920 60.000 0.00 0.00 0.00 3.36
2876 3039 1.452833 GCCTGCTAAGCCCTTCCTG 60.453 63.158 0.00 0.00 0.00 3.86
2877 3040 1.915078 GCCTGCTAAGCCCTTCCTGA 61.915 60.000 0.00 0.00 0.00 3.86
2878 3041 0.620556 CCTGCTAAGCCCTTCCTGAA 59.379 55.000 0.00 0.00 0.00 3.02
2879 3042 1.407989 CCTGCTAAGCCCTTCCTGAAG 60.408 57.143 0.00 0.00 38.14 3.02
2880 3043 0.035056 TGCTAAGCCCTTCCTGAAGC 60.035 55.000 1.25 0.00 37.11 3.86
2881 3044 0.254462 GCTAAGCCCTTCCTGAAGCT 59.746 55.000 1.25 0.00 37.11 3.74
2882 3045 1.745484 GCTAAGCCCTTCCTGAAGCTC 60.745 57.143 1.25 0.00 37.11 4.09
2883 3046 0.912486 TAAGCCCTTCCTGAAGCTCC 59.088 55.000 1.25 0.00 37.11 4.70
2884 3047 2.124942 GCCCTTCCTGAAGCTCCG 60.125 66.667 1.25 0.00 37.11 4.63
2885 3048 2.124942 CCCTTCCTGAAGCTCCGC 60.125 66.667 1.25 0.00 37.11 5.54
2886 3049 2.510238 CCTTCCTGAAGCTCCGCG 60.510 66.667 0.00 0.00 37.11 6.46
2887 3050 2.573869 CTTCCTGAAGCTCCGCGA 59.426 61.111 8.23 0.00 0.00 5.87
2888 3051 1.807573 CTTCCTGAAGCTCCGCGAC 60.808 63.158 8.23 0.00 0.00 5.19
2889 3052 3.296709 TTCCTGAAGCTCCGCGACC 62.297 63.158 8.23 0.00 0.00 4.79
2890 3053 3.764466 CCTGAAGCTCCGCGACCT 61.764 66.667 8.23 0.00 0.00 3.85
2891 3054 2.202676 CTGAAGCTCCGCGACCTC 60.203 66.667 8.23 0.00 0.00 3.85
2892 3055 2.676822 TGAAGCTCCGCGACCTCT 60.677 61.111 8.23 0.00 0.00 3.69
2893 3056 2.202676 GAAGCTCCGCGACCTCTG 60.203 66.667 8.23 0.00 0.00 3.35
2894 3057 4.443266 AAGCTCCGCGACCTCTGC 62.443 66.667 8.23 2.05 0.00 4.26
2902 3065 4.803426 CGACCTCTGCCGCTCCAC 62.803 72.222 0.00 0.00 0.00 4.02
2903 3066 4.459089 GACCTCTGCCGCTCCACC 62.459 72.222 0.00 0.00 0.00 4.61
2905 3068 2.759973 CCTCTGCCGCTCCACCTA 60.760 66.667 0.00 0.00 0.00 3.08
2906 3069 2.790791 CCTCTGCCGCTCCACCTAG 61.791 68.421 0.00 0.00 0.00 3.02
2907 3070 2.037367 TCTGCCGCTCCACCTAGT 59.963 61.111 0.00 0.00 0.00 2.57
2908 3071 2.010582 CTCTGCCGCTCCACCTAGTC 62.011 65.000 0.00 0.00 0.00 2.59
2909 3072 2.283604 TGCCGCTCCACCTAGTCA 60.284 61.111 0.00 0.00 0.00 3.41
2910 3073 2.184579 GCCGCTCCACCTAGTCAC 59.815 66.667 0.00 0.00 0.00 3.67
2911 3074 2.893398 CCGCTCCACCTAGTCACC 59.107 66.667 0.00 0.00 0.00 4.02
2912 3075 1.682684 CCGCTCCACCTAGTCACCT 60.683 63.158 0.00 0.00 0.00 4.00
2913 3076 1.668101 CCGCTCCACCTAGTCACCTC 61.668 65.000 0.00 0.00 0.00 3.85
2914 3077 0.965866 CGCTCCACCTAGTCACCTCA 60.966 60.000 0.00 0.00 0.00 3.86
2915 3078 1.267121 GCTCCACCTAGTCACCTCAA 58.733 55.000 0.00 0.00 0.00 3.02
2916 3079 1.066787 GCTCCACCTAGTCACCTCAAC 60.067 57.143 0.00 0.00 0.00 3.18
2917 3080 1.202582 CTCCACCTAGTCACCTCAACG 59.797 57.143 0.00 0.00 0.00 4.10
2918 3081 0.389948 CCACCTAGTCACCTCAACGC 60.390 60.000 0.00 0.00 0.00 4.84
2919 3082 0.603569 CACCTAGTCACCTCAACGCT 59.396 55.000 0.00 0.00 0.00 5.07
2920 3083 1.000955 CACCTAGTCACCTCAACGCTT 59.999 52.381 0.00 0.00 0.00 4.68
2921 3084 1.692519 ACCTAGTCACCTCAACGCTTT 59.307 47.619 0.00 0.00 0.00 3.51
2922 3085 2.069273 CCTAGTCACCTCAACGCTTTG 58.931 52.381 0.00 0.00 0.00 2.77
2923 3086 1.461127 CTAGTCACCTCAACGCTTTGC 59.539 52.381 0.00 0.00 32.17 3.68
2924 3087 1.166531 AGTCACCTCAACGCTTTGCC 61.167 55.000 0.00 0.00 32.17 4.52
2925 3088 1.148273 TCACCTCAACGCTTTGCCT 59.852 52.632 0.00 0.00 32.17 4.75
2926 3089 0.394938 TCACCTCAACGCTTTGCCTA 59.605 50.000 0.00 0.00 32.17 3.93
2927 3090 0.517316 CACCTCAACGCTTTGCCTAC 59.483 55.000 0.00 0.00 32.17 3.18
2928 3091 0.107831 ACCTCAACGCTTTGCCTACA 59.892 50.000 0.00 0.00 32.17 2.74
2929 3092 0.798776 CCTCAACGCTTTGCCTACAG 59.201 55.000 0.00 0.00 32.17 2.74
2930 3093 0.166814 CTCAACGCTTTGCCTACAGC 59.833 55.000 0.00 0.00 44.14 4.40
2939 3102 2.577059 GCCTACAGCGCCAGTACA 59.423 61.111 2.29 0.00 0.00 2.90
2940 3103 1.810030 GCCTACAGCGCCAGTACAC 60.810 63.158 2.29 0.00 0.00 2.90
2941 3104 1.589630 CCTACAGCGCCAGTACACA 59.410 57.895 2.29 0.00 0.00 3.72
2942 3105 0.736325 CCTACAGCGCCAGTACACAC 60.736 60.000 2.29 0.00 0.00 3.82
2943 3106 0.736325 CTACAGCGCCAGTACACACC 60.736 60.000 2.29 0.00 0.00 4.16
2944 3107 1.183030 TACAGCGCCAGTACACACCT 61.183 55.000 2.29 0.00 0.00 4.00
2945 3108 1.183030 ACAGCGCCAGTACACACCTA 61.183 55.000 2.29 0.00 0.00 3.08
2946 3109 0.175760 CAGCGCCAGTACACACCTAT 59.824 55.000 2.29 0.00 0.00 2.57
2947 3110 0.460311 AGCGCCAGTACACACCTATC 59.540 55.000 2.29 0.00 0.00 2.08
2948 3111 0.870307 GCGCCAGTACACACCTATCG 60.870 60.000 0.00 0.00 0.00 2.92
2949 3112 0.454600 CGCCAGTACACACCTATCGT 59.545 55.000 0.00 0.00 0.00 3.73
2950 3113 1.533338 CGCCAGTACACACCTATCGTC 60.533 57.143 0.00 0.00 0.00 4.20
2951 3114 1.202382 GCCAGTACACACCTATCGTCC 60.202 57.143 0.00 0.00 0.00 4.79
2952 3115 1.065102 CCAGTACACACCTATCGTCCG 59.935 57.143 0.00 0.00 0.00 4.79
2953 3116 1.741706 CAGTACACACCTATCGTCCGT 59.258 52.381 0.00 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
458 461 2.994186 AACCGGGACTAAATATGCGT 57.006 45.000 6.32 0.00 0.00 5.24
478 481 1.677552 CCTTTAGTCCCGGCTGTGT 59.322 57.895 0.00 0.00 0.00 3.72
568 571 1.529226 TGTTTGGATAACACCCAGCG 58.471 50.000 0.00 0.00 34.77 5.18
615 618 1.516161 CACCAGTGTGAGTGTCATGG 58.484 55.000 0.00 0.00 45.76 3.66
620 623 3.181455 TGATTAAGCACCAGTGTGAGTGT 60.181 43.478 0.00 0.00 45.76 3.55
621 624 3.402110 TGATTAAGCACCAGTGTGAGTG 58.598 45.455 0.00 0.00 45.76 3.51
622 625 3.769739 TGATTAAGCACCAGTGTGAGT 57.230 42.857 0.00 0.00 45.76 3.41
623 626 5.633830 AATTGATTAAGCACCAGTGTGAG 57.366 39.130 0.00 0.00 45.76 3.51
624 627 5.534278 TGAAATTGATTAAGCACCAGTGTGA 59.466 36.000 0.00 0.00 45.76 3.58
625 628 5.771469 TGAAATTGATTAAGCACCAGTGTG 58.229 37.500 0.00 0.00 45.65 3.82
700 703 5.046591 TCTGAATACAGGGTAGTTGGACTTG 60.047 44.000 0.00 0.00 43.60 3.16
849 861 5.220548 CGACCTCAATTATCTCAACAGCAAG 60.221 44.000 0.00 0.00 0.00 4.01
866 878 5.061179 TCGACTATAATGTCATCGACCTCA 58.939 41.667 0.00 0.00 36.92 3.86
927 939 2.030562 ACCTCAAACCGAGTGCCG 59.969 61.111 0.00 0.00 40.48 5.69
1203 1215 2.438021 GCCTGGTCCATGGACAAGTATA 59.562 50.000 36.73 19.52 42.97 1.47
1329 1345 3.883744 CTTGTCCTTCCGCGCCACT 62.884 63.158 0.00 0.00 0.00 4.00
1336 1352 2.747855 GGCTGCCTTGTCCTTCCG 60.748 66.667 12.43 0.00 0.00 4.30
1688 1800 0.759346 AGGTGGTCTCGATATTGGCC 59.241 55.000 0.00 0.00 0.00 5.36
1694 1806 0.471191 TCCGCTAGGTGGTCTCGATA 59.529 55.000 0.00 0.00 39.05 2.92
1696 1808 1.451567 CTCCGCTAGGTGGTCTCGA 60.452 63.158 0.00 0.00 39.05 4.04
1699 1811 2.760385 GGCTCCGCTAGGTGGTCT 60.760 66.667 0.00 0.00 39.05 3.85
1700 1812 1.972660 ATTGGCTCCGCTAGGTGGTC 61.973 60.000 0.00 0.00 39.05 4.02
1702 1814 0.815615 GAATTGGCTCCGCTAGGTGG 60.816 60.000 0.00 0.00 39.05 4.61
1709 1869 0.392998 TTCTCCAGAATTGGCTCCGC 60.393 55.000 0.00 0.00 44.63 5.54
1714 1874 5.200368 TGTTTTTCTTCTCCAGAATTGGC 57.800 39.130 0.00 0.00 44.63 4.52
1719 1879 3.117512 AGGGCTGTTTTTCTTCTCCAGAA 60.118 43.478 0.00 0.00 39.99 3.02
1721 1881 2.555757 CAGGGCTGTTTTTCTTCTCCAG 59.444 50.000 0.00 0.00 0.00 3.86
1732 1892 4.621087 GGGGGTGCAGGGCTGTTT 62.621 66.667 0.00 0.00 0.00 2.83
1748 1908 1.989508 GGGGCCCCAATTTCTGTGG 60.990 63.158 37.61 0.00 35.81 4.17
1771 1931 4.838152 CATCACCGGTGGCGGAGG 62.838 72.222 33.40 13.03 0.00 4.30
1842 2002 4.008933 GACACCACCTGCTCGGCT 62.009 66.667 0.00 0.00 35.61 5.52
2023 2185 6.999705 AATGCCACACATTCCCATTATATT 57.000 33.333 0.00 0.00 46.28 1.28
2086 2248 2.956333 AGGGAGTACAAACCAAGCAAAC 59.044 45.455 0.00 0.00 0.00 2.93
2184 2347 9.890629 ATGACGGCATTGTATAGATGTTTATAT 57.109 29.630 0.00 0.00 0.00 0.86
2185 2348 9.719355 AATGACGGCATTGTATAGATGTTTATA 57.281 29.630 17.62 0.00 42.91 0.98
2186 2349 8.621532 AATGACGGCATTGTATAGATGTTTAT 57.378 30.769 17.62 0.00 42.91 1.40
2187 2350 8.984764 GTAATGACGGCATTGTATAGATGTTTA 58.015 33.333 26.87 0.00 44.18 2.01
2188 2351 6.942532 AATGACGGCATTGTATAGATGTTT 57.057 33.333 17.62 0.00 42.91 2.83
2189 2352 7.217200 AGTAATGACGGCATTGTATAGATGTT 58.783 34.615 26.87 0.00 44.18 2.71
2190 2353 6.759272 AGTAATGACGGCATTGTATAGATGT 58.241 36.000 26.87 0.00 44.18 3.06
2191 2354 8.757164 TTAGTAATGACGGCATTGTATAGATG 57.243 34.615 26.87 0.00 44.18 2.90
2192 2355 9.772973 TTTTAGTAATGACGGCATTGTATAGAT 57.227 29.630 26.87 0.00 44.18 1.98
2193 2356 9.602568 TTTTTAGTAATGACGGCATTGTATAGA 57.397 29.630 26.87 8.63 44.18 1.98
2197 2360 9.386010 ACTATTTTTAGTAATGACGGCATTGTA 57.614 29.630 26.87 14.55 44.18 2.41
2198 2361 8.181573 CACTATTTTTAGTAATGACGGCATTGT 58.818 33.333 26.87 15.59 44.18 2.71
2199 2362 8.394877 TCACTATTTTTAGTAATGACGGCATTG 58.605 33.333 26.87 7.88 44.18 2.82
2200 2363 8.500753 TCACTATTTTTAGTAATGACGGCATT 57.499 30.769 22.30 22.30 46.11 3.56
2201 2364 8.500753 TTCACTATTTTTAGTAATGACGGCAT 57.499 30.769 0.00 0.00 35.92 4.40
2202 2365 7.908827 TTCACTATTTTTAGTAATGACGGCA 57.091 32.000 0.00 0.00 0.00 5.69
2203 2366 7.376072 GCATTCACTATTTTTAGTAATGACGGC 59.624 37.037 0.00 0.00 31.00 5.68
2204 2367 8.394877 TGCATTCACTATTTTTAGTAATGACGG 58.605 33.333 0.00 0.00 31.00 4.79
2205 2368 9.425893 CTGCATTCACTATTTTTAGTAATGACG 57.574 33.333 0.00 0.00 31.00 4.35
2212 2375 9.331282 GTCCTATCTGCATTCACTATTTTTAGT 57.669 33.333 0.00 0.00 0.00 2.24
2213 2376 9.553064 AGTCCTATCTGCATTCACTATTTTTAG 57.447 33.333 0.00 0.00 0.00 1.85
2214 2377 9.905713 AAGTCCTATCTGCATTCACTATTTTTA 57.094 29.630 0.00 0.00 0.00 1.52
2215 2378 8.814038 AAGTCCTATCTGCATTCACTATTTTT 57.186 30.769 0.00 0.00 0.00 1.94
2216 2379 8.814038 AAAGTCCTATCTGCATTCACTATTTT 57.186 30.769 0.00 0.00 0.00 1.82
2217 2380 8.814038 AAAAGTCCTATCTGCATTCACTATTT 57.186 30.769 0.00 0.00 0.00 1.40
2218 2381 7.500559 GGAAAAGTCCTATCTGCATTCACTATT 59.499 37.037 0.00 0.00 41.24 1.73
2219 2382 6.995091 GGAAAAGTCCTATCTGCATTCACTAT 59.005 38.462 0.00 0.00 41.24 2.12
2220 2383 6.070251 TGGAAAAGTCCTATCTGCATTCACTA 60.070 38.462 0.00 0.00 45.22 2.74
2221 2384 5.189180 GGAAAAGTCCTATCTGCATTCACT 58.811 41.667 0.00 0.00 41.24 3.41
2222 2385 4.943705 TGGAAAAGTCCTATCTGCATTCAC 59.056 41.667 0.00 0.00 45.22 3.18
2223 2386 5.178096 TGGAAAAGTCCTATCTGCATTCA 57.822 39.130 0.00 0.00 45.22 2.57
2224 2387 6.515272 TTTGGAAAAGTCCTATCTGCATTC 57.485 37.500 0.00 0.00 45.22 2.67
2225 2388 6.127253 CCATTTGGAAAAGTCCTATCTGCATT 60.127 38.462 0.00 0.00 45.22 3.56
2226 2389 5.361857 CCATTTGGAAAAGTCCTATCTGCAT 59.638 40.000 0.00 0.00 45.22 3.96
2227 2390 4.706476 CCATTTGGAAAAGTCCTATCTGCA 59.294 41.667 0.00 0.00 45.22 4.41
2228 2391 4.098501 CCCATTTGGAAAAGTCCTATCTGC 59.901 45.833 0.00 0.00 45.22 4.26
2229 2392 4.646492 CCCCATTTGGAAAAGTCCTATCTG 59.354 45.833 0.00 0.00 45.22 2.90
2230 2393 4.871822 CCCCATTTGGAAAAGTCCTATCT 58.128 43.478 0.00 0.00 45.22 1.98
2231 2394 3.384789 GCCCCATTTGGAAAAGTCCTATC 59.615 47.826 0.00 0.00 45.22 2.08
2232 2395 3.012844 AGCCCCATTTGGAAAAGTCCTAT 59.987 43.478 0.00 0.00 45.22 2.57
2233 2396 2.381961 AGCCCCATTTGGAAAAGTCCTA 59.618 45.455 0.00 0.00 45.22 2.94
2234 2397 1.149923 AGCCCCATTTGGAAAAGTCCT 59.850 47.619 0.00 0.00 45.22 3.85
2235 2398 1.644509 AGCCCCATTTGGAAAAGTCC 58.355 50.000 0.00 0.00 45.21 3.85
2236 2399 2.871637 GCAAGCCCCATTTGGAAAAGTC 60.872 50.000 0.00 0.00 37.39 3.01
2237 2400 1.072173 GCAAGCCCCATTTGGAAAAGT 59.928 47.619 0.00 0.00 37.39 2.66
2238 2401 1.611410 GGCAAGCCCCATTTGGAAAAG 60.611 52.381 0.00 0.00 37.39 2.27
2239 2402 0.399833 GGCAAGCCCCATTTGGAAAA 59.600 50.000 0.00 0.00 37.39 2.29
2240 2403 1.825281 CGGCAAGCCCCATTTGGAAA 61.825 55.000 5.34 0.00 37.39 3.13
2241 2404 2.282039 CGGCAAGCCCCATTTGGAA 61.282 57.895 5.34 0.00 37.39 3.53
2242 2405 2.679642 CGGCAAGCCCCATTTGGA 60.680 61.111 5.34 0.00 37.39 3.53
2243 2406 2.679642 TCGGCAAGCCCCATTTGG 60.680 61.111 5.34 0.00 0.00 3.28
2244 2407 1.535204 AACTCGGCAAGCCCCATTTG 61.535 55.000 5.34 0.00 0.00 2.32
2245 2408 1.228862 AACTCGGCAAGCCCCATTT 60.229 52.632 5.34 0.00 0.00 2.32
2246 2409 1.678970 GAACTCGGCAAGCCCCATT 60.679 57.895 5.34 0.00 0.00 3.16
2247 2410 2.044946 GAACTCGGCAAGCCCCAT 60.045 61.111 5.34 0.00 0.00 4.00
2248 2411 4.344865 GGAACTCGGCAAGCCCCA 62.345 66.667 5.34 0.00 0.00 4.96
2250 2413 4.035102 AGGGAACTCGGCAAGCCC 62.035 66.667 5.34 0.00 32.90 5.19
2251 2414 2.747855 CAGGGAACTCGGCAAGCC 60.748 66.667 0.00 0.00 40.21 4.35
2252 2415 2.032681 ACAGGGAACTCGGCAAGC 59.967 61.111 0.00 0.00 40.21 4.01
2253 2416 2.328099 GCACAGGGAACTCGGCAAG 61.328 63.158 0.00 0.00 40.21 4.01
2254 2417 2.281484 GCACAGGGAACTCGGCAA 60.281 61.111 0.00 0.00 40.21 4.52
2255 2418 3.555324 TGCACAGGGAACTCGGCA 61.555 61.111 0.00 0.00 42.42 5.69
2256 2419 3.050275 GTGCACAGGGAACTCGGC 61.050 66.667 13.17 0.00 40.21 5.54
2257 2420 1.374758 GAGTGCACAGGGAACTCGG 60.375 63.158 21.04 0.00 40.21 4.63
2258 2421 0.036952 ATGAGTGCACAGGGAACTCG 60.037 55.000 21.04 0.00 42.65 4.18
2259 2422 2.191128 AATGAGTGCACAGGGAACTC 57.809 50.000 21.04 3.38 40.21 3.01
2260 2423 2.639839 AGTAATGAGTGCACAGGGAACT 59.360 45.455 21.04 13.37 46.44 3.01
2261 2424 3.059352 AGTAATGAGTGCACAGGGAAC 57.941 47.619 21.04 11.25 0.00 3.62
2262 2425 4.901197 TTAGTAATGAGTGCACAGGGAA 57.099 40.909 21.04 0.00 0.00 3.97
2263 2426 4.901197 TTTAGTAATGAGTGCACAGGGA 57.099 40.909 21.04 0.00 0.00 4.20
2264 2427 6.324819 CAAATTTAGTAATGAGTGCACAGGG 58.675 40.000 21.04 0.00 0.00 4.45
2265 2428 5.801947 GCAAATTTAGTAATGAGTGCACAGG 59.198 40.000 21.04 0.00 31.85 4.00
2266 2429 6.380995 TGCAAATTTAGTAATGAGTGCACAG 58.619 36.000 21.04 0.00 34.53 3.66
2267 2430 6.324561 TGCAAATTTAGTAATGAGTGCACA 57.675 33.333 21.04 0.00 34.53 4.57
2268 2431 6.863126 ACTTGCAAATTTAGTAATGAGTGCAC 59.137 34.615 9.40 9.40 36.96 4.57
2269 2432 6.980593 ACTTGCAAATTTAGTAATGAGTGCA 58.019 32.000 0.00 6.85 36.16 4.57
2270 2433 6.249260 CGACTTGCAAATTTAGTAATGAGTGC 59.751 38.462 0.00 0.00 32.03 4.40
2271 2434 6.742718 CCGACTTGCAAATTTAGTAATGAGTG 59.257 38.462 0.00 0.00 0.00 3.51
2272 2435 6.653320 TCCGACTTGCAAATTTAGTAATGAGT 59.347 34.615 0.00 0.00 0.00 3.41
2273 2436 7.064609 TCTCCGACTTGCAAATTTAGTAATGAG 59.935 37.037 0.00 1.96 0.00 2.90
2274 2437 6.876789 TCTCCGACTTGCAAATTTAGTAATGA 59.123 34.615 0.00 0.00 0.00 2.57
2275 2438 7.072177 TCTCCGACTTGCAAATTTAGTAATG 57.928 36.000 0.00 0.00 0.00 1.90
2276 2439 7.254455 CGATCTCCGACTTGCAAATTTAGTAAT 60.254 37.037 0.00 0.00 41.76 1.89
2277 2440 6.035650 CGATCTCCGACTTGCAAATTTAGTAA 59.964 38.462 0.00 0.00 41.76 2.24
2278 2441 5.518847 CGATCTCCGACTTGCAAATTTAGTA 59.481 40.000 0.00 0.00 41.76 1.82
2279 2442 4.330074 CGATCTCCGACTTGCAAATTTAGT 59.670 41.667 0.00 0.00 41.76 2.24
2280 2443 4.566759 TCGATCTCCGACTTGCAAATTTAG 59.433 41.667 0.00 0.00 43.23 1.85
2281 2444 4.500127 TCGATCTCCGACTTGCAAATTTA 58.500 39.130 0.00 0.00 43.23 1.40
2282 2445 3.334691 TCGATCTCCGACTTGCAAATTT 58.665 40.909 0.00 0.00 43.23 1.82
2283 2446 2.972625 TCGATCTCCGACTTGCAAATT 58.027 42.857 0.00 0.00 43.23 1.82
2284 2447 2.672961 TCGATCTCCGACTTGCAAAT 57.327 45.000 0.00 0.00 43.23 2.32
2293 2456 2.100197 ACTCCAATTGTCGATCTCCGA 58.900 47.619 4.43 0.00 46.35 4.55
2294 2457 2.586258 ACTCCAATTGTCGATCTCCG 57.414 50.000 4.43 0.00 40.25 4.63
2295 2458 6.647067 CCTTAATACTCCAATTGTCGATCTCC 59.353 42.308 4.43 0.00 0.00 3.71
2296 2459 7.210873 ACCTTAATACTCCAATTGTCGATCTC 58.789 38.462 4.43 0.00 0.00 2.75
2297 2460 7.125792 ACCTTAATACTCCAATTGTCGATCT 57.874 36.000 4.43 0.00 0.00 2.75
2298 2461 7.787725 AACCTTAATACTCCAATTGTCGATC 57.212 36.000 4.43 0.00 0.00 3.69
2299 2462 8.701895 TCTAACCTTAATACTCCAATTGTCGAT 58.298 33.333 4.43 0.00 0.00 3.59
2300 2463 8.070034 TCTAACCTTAATACTCCAATTGTCGA 57.930 34.615 4.43 0.00 0.00 4.20
2301 2464 7.042658 GCTCTAACCTTAATACTCCAATTGTCG 60.043 40.741 4.43 0.00 0.00 4.35
2302 2465 7.769044 TGCTCTAACCTTAATACTCCAATTGTC 59.231 37.037 4.43 0.00 0.00 3.18
2303 2466 7.630082 TGCTCTAACCTTAATACTCCAATTGT 58.370 34.615 4.43 0.00 0.00 2.71
2304 2467 8.682936 ATGCTCTAACCTTAATACTCCAATTG 57.317 34.615 0.00 0.00 0.00 2.32
2305 2468 8.718656 AGATGCTCTAACCTTAATACTCCAATT 58.281 33.333 0.00 0.00 0.00 2.32
2306 2469 8.268878 AGATGCTCTAACCTTAATACTCCAAT 57.731 34.615 0.00 0.00 0.00 3.16
2307 2470 7.202011 GGAGATGCTCTAACCTTAATACTCCAA 60.202 40.741 0.00 0.00 38.84 3.53
2308 2471 6.267928 GGAGATGCTCTAACCTTAATACTCCA 59.732 42.308 0.00 0.00 38.84 3.86
2309 2472 6.267928 TGGAGATGCTCTAACCTTAATACTCC 59.732 42.308 0.00 0.00 39.27 3.85
2310 2473 7.291411 TGGAGATGCTCTAACCTTAATACTC 57.709 40.000 0.00 0.00 0.00 2.59
2311 2474 7.676683 TTGGAGATGCTCTAACCTTAATACT 57.323 36.000 0.00 0.00 0.00 2.12
2312 2475 7.041712 GCTTTGGAGATGCTCTAACCTTAATAC 60.042 40.741 0.00 0.00 30.99 1.89
2313 2476 6.992715 GCTTTGGAGATGCTCTAACCTTAATA 59.007 38.462 0.00 0.00 30.99 0.98
2314 2477 5.825151 GCTTTGGAGATGCTCTAACCTTAAT 59.175 40.000 0.00 0.00 30.99 1.40
2315 2478 5.186198 GCTTTGGAGATGCTCTAACCTTAA 58.814 41.667 0.00 0.00 30.99 1.85
2316 2479 4.225042 TGCTTTGGAGATGCTCTAACCTTA 59.775 41.667 0.00 0.00 30.99 2.69
2317 2480 3.009473 TGCTTTGGAGATGCTCTAACCTT 59.991 43.478 0.00 0.00 30.99 3.50
2318 2481 2.573462 TGCTTTGGAGATGCTCTAACCT 59.427 45.455 0.00 0.00 30.99 3.50
2319 2482 2.941720 CTGCTTTGGAGATGCTCTAACC 59.058 50.000 0.00 0.00 30.99 2.85
2320 2483 3.620821 GTCTGCTTTGGAGATGCTCTAAC 59.379 47.826 0.00 0.00 30.99 2.34
2321 2484 3.369892 GGTCTGCTTTGGAGATGCTCTAA 60.370 47.826 0.00 0.00 0.00 2.10
2322 2485 2.169352 GGTCTGCTTTGGAGATGCTCTA 59.831 50.000 0.00 0.00 0.00 2.43
2323 2486 1.065564 GGTCTGCTTTGGAGATGCTCT 60.066 52.381 0.00 0.00 0.00 4.09
2324 2487 1.377536 GGTCTGCTTTGGAGATGCTC 58.622 55.000 0.00 0.00 0.00 4.26
2325 2488 0.034670 GGGTCTGCTTTGGAGATGCT 60.035 55.000 0.00 0.00 0.00 3.79
2326 2489 0.034670 AGGGTCTGCTTTGGAGATGC 60.035 55.000 0.00 0.00 0.00 3.91
2327 2490 1.280133 TGAGGGTCTGCTTTGGAGATG 59.720 52.381 0.00 0.00 0.00 2.90
2328 2491 1.661463 TGAGGGTCTGCTTTGGAGAT 58.339 50.000 0.00 0.00 0.00 2.75
2329 2492 1.434188 TTGAGGGTCTGCTTTGGAGA 58.566 50.000 0.00 0.00 0.00 3.71
2330 2493 2.276732 TTTGAGGGTCTGCTTTGGAG 57.723 50.000 0.00 0.00 0.00 3.86
2331 2494 2.795329 GATTTGAGGGTCTGCTTTGGA 58.205 47.619 0.00 0.00 0.00 3.53
2332 2495 1.470098 CGATTTGAGGGTCTGCTTTGG 59.530 52.381 0.00 0.00 0.00 3.28
2333 2496 1.135575 GCGATTTGAGGGTCTGCTTTG 60.136 52.381 0.00 0.00 0.00 2.77
2334 2497 1.168714 GCGATTTGAGGGTCTGCTTT 58.831 50.000 0.00 0.00 0.00 3.51
2335 2498 0.678048 GGCGATTTGAGGGTCTGCTT 60.678 55.000 0.00 0.00 0.00 3.91
2336 2499 1.078143 GGCGATTTGAGGGTCTGCT 60.078 57.895 0.00 0.00 0.00 4.24
2337 2500 2.115291 GGGCGATTTGAGGGTCTGC 61.115 63.158 0.00 0.00 0.00 4.26
2338 2501 1.815421 CGGGCGATTTGAGGGTCTG 60.815 63.158 0.00 0.00 0.00 3.51
2339 2502 2.584608 CGGGCGATTTGAGGGTCT 59.415 61.111 0.00 0.00 0.00 3.85
2340 2503 3.202706 GCGGGCGATTTGAGGGTC 61.203 66.667 0.00 0.00 0.00 4.46
2341 2504 3.561120 TTGCGGGCGATTTGAGGGT 62.561 57.895 0.00 0.00 0.00 4.34
2342 2505 2.339556 TTTGCGGGCGATTTGAGGG 61.340 57.895 0.00 0.00 0.00 4.30
2343 2506 1.154035 GTTTGCGGGCGATTTGAGG 60.154 57.895 0.00 0.00 0.00 3.86
2344 2507 1.511887 CGTTTGCGGGCGATTTGAG 60.512 57.895 0.00 0.00 0.00 3.02
2345 2508 2.177654 GACGTTTGCGGGCGATTTGA 62.178 55.000 0.00 0.00 43.45 2.69
2346 2509 1.795962 GACGTTTGCGGGCGATTTG 60.796 57.895 0.00 0.00 43.45 2.32
2347 2510 2.559330 GACGTTTGCGGGCGATTT 59.441 55.556 0.00 0.00 43.45 2.17
2348 2511 3.428282 GGACGTTTGCGGGCGATT 61.428 61.111 0.00 0.00 43.45 3.34
2349 2512 4.690719 TGGACGTTTGCGGGCGAT 62.691 61.111 0.00 0.00 43.45 4.58
2350 2513 4.912485 TTGGACGTTTGCGGGCGA 62.912 61.111 0.00 0.00 43.45 5.54
2351 2514 3.955101 TTTGGACGTTTGCGGGCG 61.955 61.111 0.00 0.00 43.45 6.13
2352 2515 2.354188 GTTTGGACGTTTGCGGGC 60.354 61.111 0.00 0.00 43.45 6.13
2353 2516 1.008995 CAGTTTGGACGTTTGCGGG 60.009 57.895 0.00 0.00 43.45 6.13
2354 2517 1.657181 GCAGTTTGGACGTTTGCGG 60.657 57.895 0.00 0.00 43.45 5.69
2355 2518 3.902234 GCAGTTTGGACGTTTGCG 58.098 55.556 0.00 0.00 44.93 4.85
2356 2519 1.063488 ACGCAGTTTGGACGTTTGC 59.937 52.632 0.00 0.00 37.78 3.68
2369 2532 1.133253 CTGCATTCGGACAACGCAG 59.867 57.895 0.00 0.00 43.55 5.18
2370 2533 1.163420 AACTGCATTCGGACAACGCA 61.163 50.000 0.00 0.00 43.86 5.24
2371 2534 0.793861 TAACTGCATTCGGACAACGC 59.206 50.000 0.00 0.00 43.86 4.84
2372 2535 1.201921 GCTAACTGCATTCGGACAACG 60.202 52.381 0.00 0.00 42.45 4.10
2373 2536 1.130561 GGCTAACTGCATTCGGACAAC 59.869 52.381 0.00 0.00 45.15 3.32
2374 2537 1.271108 TGGCTAACTGCATTCGGACAA 60.271 47.619 0.00 0.00 45.15 3.18
2375 2538 0.323302 TGGCTAACTGCATTCGGACA 59.677 50.000 0.00 0.00 45.15 4.02
2376 2539 1.599542 GATGGCTAACTGCATTCGGAC 59.400 52.381 0.00 0.00 45.15 4.79
2377 2540 1.806247 CGATGGCTAACTGCATTCGGA 60.806 52.381 0.00 0.00 45.15 4.55
2378 2541 0.583438 CGATGGCTAACTGCATTCGG 59.417 55.000 0.00 0.00 45.15 4.30
2379 2542 1.570813 TCGATGGCTAACTGCATTCG 58.429 50.000 0.00 0.00 45.15 3.34
2380 2543 2.285834 CGTTCGATGGCTAACTGCATTC 60.286 50.000 0.00 0.00 45.15 2.67
2381 2544 1.665679 CGTTCGATGGCTAACTGCATT 59.334 47.619 0.00 0.00 45.15 3.56
2382 2545 1.290203 CGTTCGATGGCTAACTGCAT 58.710 50.000 0.00 0.00 45.15 3.96
2383 2546 0.037697 ACGTTCGATGGCTAACTGCA 60.038 50.000 0.00 0.00 45.15 4.41
2384 2547 0.645868 GACGTTCGATGGCTAACTGC 59.354 55.000 0.00 0.00 41.94 4.40
2385 2548 0.914551 CGACGTTCGATGGCTAACTG 59.085 55.000 0.00 0.00 43.74 3.16
2386 2549 0.524862 ACGACGTTCGATGGCTAACT 59.475 50.000 13.06 0.00 43.74 2.24
2387 2550 0.912528 GACGACGTTCGATGGCTAAC 59.087 55.000 0.13 0.00 43.74 2.34
2388 2551 0.521867 CGACGACGTTCGATGGCTAA 60.522 55.000 0.13 0.00 43.74 3.09
2389 2552 1.061411 CGACGACGTTCGATGGCTA 59.939 57.895 0.13 0.00 43.74 3.93
2390 2553 2.202440 CGACGACGTTCGATGGCT 60.202 61.111 0.13 0.00 43.74 4.75
2391 2554 3.898640 GCGACGACGTTCGATGGC 61.899 66.667 13.55 9.20 43.74 4.40
2392 2555 3.245315 GGCGACGACGTTCGATGG 61.245 66.667 13.55 4.04 43.74 3.51
2393 2556 3.245315 GGGCGACGACGTTCGATG 61.245 66.667 13.55 6.57 43.74 3.84
2394 2557 2.552585 ATTGGGCGACGACGTTCGAT 62.553 55.000 13.55 4.35 43.74 3.59
2395 2558 1.921045 TATTGGGCGACGACGTTCGA 61.921 55.000 13.55 2.15 43.74 3.71
2396 2559 1.469126 CTATTGGGCGACGACGTTCG 61.469 60.000 9.33 8.64 46.93 3.95
2397 2560 0.457337 ACTATTGGGCGACGACGTTC 60.457 55.000 9.33 0.00 41.98 3.95
2398 2561 0.457337 GACTATTGGGCGACGACGTT 60.457 55.000 9.33 0.00 41.98 3.99
2399 2562 1.138247 GACTATTGGGCGACGACGT 59.862 57.895 9.33 0.00 41.98 4.34
2400 2563 0.866061 CAGACTATTGGGCGACGACG 60.866 60.000 2.12 2.12 42.93 5.12
2401 2564 1.146358 GCAGACTATTGGGCGACGAC 61.146 60.000 0.00 0.00 0.00 4.34
2402 2565 1.141019 GCAGACTATTGGGCGACGA 59.859 57.895 0.00 0.00 0.00 4.20
2403 2566 1.148157 CTGCAGACTATTGGGCGACG 61.148 60.000 8.42 0.00 0.00 5.12
2404 2567 0.175760 TCTGCAGACTATTGGGCGAC 59.824 55.000 13.74 0.00 0.00 5.19
2405 2568 0.175760 GTCTGCAGACTATTGGGCGA 59.824 55.000 34.54 0.00 41.65 5.54
2406 2569 0.811616 GGTCTGCAGACTATTGGGCG 60.812 60.000 38.17 0.57 44.20 6.13
2407 2570 0.253044 TGGTCTGCAGACTATTGGGC 59.747 55.000 38.17 23.72 44.20 5.36
2408 2571 2.787473 TTGGTCTGCAGACTATTGGG 57.213 50.000 38.17 1.92 44.20 4.12
2409 2572 3.209410 GGATTGGTCTGCAGACTATTGG 58.791 50.000 38.17 2.71 44.20 3.16
2410 2573 3.209410 GGGATTGGTCTGCAGACTATTG 58.791 50.000 38.17 3.51 44.20 1.90
2411 2574 2.846206 TGGGATTGGTCTGCAGACTATT 59.154 45.455 38.17 30.41 44.20 1.73
2412 2575 2.481441 TGGGATTGGTCTGCAGACTAT 58.519 47.619 38.17 31.04 44.20 2.12
2413 2576 1.951209 TGGGATTGGTCTGCAGACTA 58.049 50.000 38.17 33.08 44.20 2.59
2414 2577 1.293062 ATGGGATTGGTCTGCAGACT 58.707 50.000 38.17 24.06 44.20 3.24
2415 2578 2.134789 AATGGGATTGGTCTGCAGAC 57.865 50.000 34.25 34.25 44.04 3.51
2416 2579 3.181440 GGATAATGGGATTGGTCTGCAGA 60.181 47.826 13.74 13.74 0.00 4.26
2417 2580 3.152341 GGATAATGGGATTGGTCTGCAG 58.848 50.000 7.63 7.63 0.00 4.41
2418 2581 2.487086 CGGATAATGGGATTGGTCTGCA 60.487 50.000 0.00 0.00 0.00 4.41
2419 2582 2.154462 CGGATAATGGGATTGGTCTGC 58.846 52.381 0.00 0.00 0.00 4.26
2420 2583 3.492102 ACGGATAATGGGATTGGTCTG 57.508 47.619 0.00 0.00 0.00 3.51
2421 2584 4.519906 AAACGGATAATGGGATTGGTCT 57.480 40.909 0.00 0.00 0.00 3.85
2422 2585 5.592104 AAAAACGGATAATGGGATTGGTC 57.408 39.130 0.00 0.00 0.00 4.02
2719 2882 1.471119 TCTAAGTGGTGGCGGTCTAG 58.529 55.000 0.00 0.00 0.00 2.43
2720 2883 1.547372 GTTCTAAGTGGTGGCGGTCTA 59.453 52.381 0.00 0.00 0.00 2.59
2721 2884 0.320697 GTTCTAAGTGGTGGCGGTCT 59.679 55.000 0.00 0.00 0.00 3.85
2722 2885 0.320697 AGTTCTAAGTGGTGGCGGTC 59.679 55.000 0.00 0.00 0.00 4.79
2723 2886 1.274447 GTAGTTCTAAGTGGTGGCGGT 59.726 52.381 0.00 0.00 0.00 5.68
2724 2887 1.734707 CGTAGTTCTAAGTGGTGGCGG 60.735 57.143 0.00 0.00 0.00 6.13
2725 2888 1.200716 TCGTAGTTCTAAGTGGTGGCG 59.799 52.381 0.00 0.00 0.00 5.69
2726 2889 2.029649 TGTCGTAGTTCTAAGTGGTGGC 60.030 50.000 0.00 0.00 0.00 5.01
2727 2890 3.928727 TGTCGTAGTTCTAAGTGGTGG 57.071 47.619 0.00 0.00 0.00 4.61
2728 2891 4.857588 GTGATGTCGTAGTTCTAAGTGGTG 59.142 45.833 0.00 0.00 0.00 4.17
2729 2892 4.082354 GGTGATGTCGTAGTTCTAAGTGGT 60.082 45.833 0.00 0.00 0.00 4.16
2730 2893 4.421948 GGTGATGTCGTAGTTCTAAGTGG 58.578 47.826 0.00 0.00 0.00 4.00
2731 2894 4.096311 CGGTGATGTCGTAGTTCTAAGTG 58.904 47.826 0.00 0.00 0.00 3.16
2732 2895 4.005650 TCGGTGATGTCGTAGTTCTAAGT 58.994 43.478 0.00 0.00 0.00 2.24
2733 2896 4.341099 GTCGGTGATGTCGTAGTTCTAAG 58.659 47.826 0.00 0.00 0.00 2.18
2734 2897 3.127548 GGTCGGTGATGTCGTAGTTCTAA 59.872 47.826 0.00 0.00 0.00 2.10
2735 2898 2.679837 GGTCGGTGATGTCGTAGTTCTA 59.320 50.000 0.00 0.00 0.00 2.10
2736 2899 1.471684 GGTCGGTGATGTCGTAGTTCT 59.528 52.381 0.00 0.00 0.00 3.01
2737 2900 1.468736 GGGTCGGTGATGTCGTAGTTC 60.469 57.143 0.00 0.00 0.00 3.01
2738 2901 0.529378 GGGTCGGTGATGTCGTAGTT 59.471 55.000 0.00 0.00 0.00 2.24
2739 2902 0.609957 TGGGTCGGTGATGTCGTAGT 60.610 55.000 0.00 0.00 0.00 2.73
2740 2903 0.744874 ATGGGTCGGTGATGTCGTAG 59.255 55.000 0.00 0.00 0.00 3.51
2741 2904 0.742505 GATGGGTCGGTGATGTCGTA 59.257 55.000 0.00 0.00 0.00 3.43
2742 2905 1.515954 GATGGGTCGGTGATGTCGT 59.484 57.895 0.00 0.00 0.00 4.34
2743 2906 1.227263 GGATGGGTCGGTGATGTCG 60.227 63.158 0.00 0.00 0.00 4.35
2744 2907 0.251916 TTGGATGGGTCGGTGATGTC 59.748 55.000 0.00 0.00 0.00 3.06
2745 2908 0.695924 TTTGGATGGGTCGGTGATGT 59.304 50.000 0.00 0.00 0.00 3.06
2746 2909 1.472480 GTTTTGGATGGGTCGGTGATG 59.528 52.381 0.00 0.00 0.00 3.07
2747 2910 1.615919 GGTTTTGGATGGGTCGGTGAT 60.616 52.381 0.00 0.00 0.00 3.06
2748 2911 0.250989 GGTTTTGGATGGGTCGGTGA 60.251 55.000 0.00 0.00 0.00 4.02
2749 2912 1.248101 GGGTTTTGGATGGGTCGGTG 61.248 60.000 0.00 0.00 0.00 4.94
2750 2913 1.076014 GGGTTTTGGATGGGTCGGT 59.924 57.895 0.00 0.00 0.00 4.69
2751 2914 1.680989 GGGGTTTTGGATGGGTCGG 60.681 63.158 0.00 0.00 0.00 4.79
2752 2915 1.075836 TGGGGTTTTGGATGGGTCG 59.924 57.895 0.00 0.00 0.00 4.79
2753 2916 0.902984 GGTGGGGTTTTGGATGGGTC 60.903 60.000 0.00 0.00 0.00 4.46
2754 2917 1.157513 GGTGGGGTTTTGGATGGGT 59.842 57.895 0.00 0.00 0.00 4.51
2755 2918 1.612146 GGGTGGGGTTTTGGATGGG 60.612 63.158 0.00 0.00 0.00 4.00
2756 2919 1.981853 CGGGTGGGGTTTTGGATGG 60.982 63.158 0.00 0.00 0.00 3.51
2757 2920 1.981853 CCGGGTGGGGTTTTGGATG 60.982 63.158 0.00 0.00 0.00 3.51
2758 2921 2.443324 CCGGGTGGGGTTTTGGAT 59.557 61.111 0.00 0.00 0.00 3.41
2773 2936 4.096003 ATGAGAACGTGGGGCCCG 62.096 66.667 19.83 9.63 0.00 6.13
2774 2937 2.124695 GATGAGAACGTGGGGCCC 60.125 66.667 18.17 18.17 0.00 5.80
2775 2938 2.124695 GGATGAGAACGTGGGGCC 60.125 66.667 0.00 0.00 0.00 5.80
2776 2939 2.311688 ATCGGATGAGAACGTGGGGC 62.312 60.000 0.00 0.00 0.00 5.80
2777 2940 0.249489 GATCGGATGAGAACGTGGGG 60.249 60.000 0.00 0.00 0.00 4.96
2778 2941 0.249489 GGATCGGATGAGAACGTGGG 60.249 60.000 0.00 0.00 0.00 4.61
2779 2942 0.249489 GGGATCGGATGAGAACGTGG 60.249 60.000 0.00 0.00 0.00 4.94
2780 2943 0.747255 AGGGATCGGATGAGAACGTG 59.253 55.000 0.00 0.00 0.00 4.49
2781 2944 1.033574 GAGGGATCGGATGAGAACGT 58.966 55.000 0.00 0.00 0.00 3.99
2782 2945 1.323412 AGAGGGATCGGATGAGAACG 58.677 55.000 0.00 0.00 0.00 3.95
2783 2946 3.386402 AGAAAGAGGGATCGGATGAGAAC 59.614 47.826 0.00 0.00 0.00 3.01
2784 2947 3.639094 GAGAAAGAGGGATCGGATGAGAA 59.361 47.826 0.00 0.00 0.00 2.87
2785 2948 3.117322 AGAGAAAGAGGGATCGGATGAGA 60.117 47.826 0.00 0.00 0.00 3.27
2786 2949 3.005684 CAGAGAAAGAGGGATCGGATGAG 59.994 52.174 0.00 0.00 0.00 2.90
2787 2950 2.961741 CAGAGAAAGAGGGATCGGATGA 59.038 50.000 0.00 0.00 0.00 2.92
2788 2951 2.036992 CCAGAGAAAGAGGGATCGGATG 59.963 54.545 0.00 0.00 0.00 3.51
2789 2952 2.091055 TCCAGAGAAAGAGGGATCGGAT 60.091 50.000 0.00 0.00 0.00 4.18
2790 2953 1.288037 TCCAGAGAAAGAGGGATCGGA 59.712 52.381 0.00 0.00 0.00 4.55
2791 2954 1.781786 TCCAGAGAAAGAGGGATCGG 58.218 55.000 0.00 0.00 0.00 4.18
2792 2955 3.658757 GATCCAGAGAAAGAGGGATCG 57.341 52.381 0.00 0.00 44.40 3.69
2794 2957 2.324541 CGGATCCAGAGAAAGAGGGAT 58.675 52.381 13.41 0.00 42.66 3.85
2795 2958 1.781786 CGGATCCAGAGAAAGAGGGA 58.218 55.000 13.41 0.00 0.00 4.20
2796 2959 0.105778 GCGGATCCAGAGAAAGAGGG 59.894 60.000 13.41 0.00 0.00 4.30
2797 2960 1.118838 AGCGGATCCAGAGAAAGAGG 58.881 55.000 13.41 0.00 0.00 3.69
2798 2961 2.977772 AAGCGGATCCAGAGAAAGAG 57.022 50.000 13.41 0.00 0.00 2.85
2799 2962 4.202264 GGATAAAGCGGATCCAGAGAAAGA 60.202 45.833 13.41 0.00 42.26 2.52
2800 2963 4.061596 GGATAAAGCGGATCCAGAGAAAG 58.938 47.826 13.41 0.00 42.26 2.62
2801 2964 3.181454 GGGATAAAGCGGATCCAGAGAAA 60.181 47.826 13.41 0.00 44.17 2.52
2802 2965 2.368875 GGGATAAAGCGGATCCAGAGAA 59.631 50.000 13.41 0.00 44.17 2.87
2803 2966 1.971357 GGGATAAAGCGGATCCAGAGA 59.029 52.381 13.41 0.00 44.17 3.10
2804 2967 1.694150 TGGGATAAAGCGGATCCAGAG 59.306 52.381 13.41 0.00 44.17 3.35
2805 2968 1.416401 GTGGGATAAAGCGGATCCAGA 59.584 52.381 13.41 0.00 44.17 3.86
2806 2969 1.140852 TGTGGGATAAAGCGGATCCAG 59.859 52.381 13.41 5.88 44.17 3.86
2807 2970 1.134220 GTGTGGGATAAAGCGGATCCA 60.134 52.381 13.41 0.00 44.17 3.41
2808 2971 1.594331 GTGTGGGATAAAGCGGATCC 58.406 55.000 0.00 0.00 42.00 3.36
2809 2972 1.594331 GGTGTGGGATAAAGCGGATC 58.406 55.000 0.00 0.00 0.00 3.36
2810 2973 0.179056 CGGTGTGGGATAAAGCGGAT 60.179 55.000 0.00 0.00 0.00 4.18
2811 2974 1.219664 CGGTGTGGGATAAAGCGGA 59.780 57.895 0.00 0.00 0.00 5.54
2812 2975 2.469516 GCGGTGTGGGATAAAGCGG 61.470 63.158 0.00 0.00 35.48 5.52
2813 2976 2.469516 GGCGGTGTGGGATAAAGCG 61.470 63.158 0.00 0.00 37.83 4.68
2814 2977 1.377987 TGGCGGTGTGGGATAAAGC 60.378 57.895 0.00 0.00 0.00 3.51
2815 2978 1.029947 GGTGGCGGTGTGGGATAAAG 61.030 60.000 0.00 0.00 0.00 1.85
2816 2979 1.001887 GGTGGCGGTGTGGGATAAA 60.002 57.895 0.00 0.00 0.00 1.40
2817 2980 2.672295 GGTGGCGGTGTGGGATAA 59.328 61.111 0.00 0.00 0.00 1.75
2818 2981 3.776781 CGGTGGCGGTGTGGGATA 61.777 66.667 0.00 0.00 0.00 2.59
2835 2998 3.850095 GAGATGGTAGAGCCGCGGC 62.850 68.421 42.34 42.34 41.21 6.53
2836 2999 2.336809 GAGATGGTAGAGCCGCGG 59.663 66.667 24.05 24.05 41.21 6.46
2837 3000 2.050895 CGAGATGGTAGAGCCGCG 60.051 66.667 0.00 0.00 41.21 6.46
2838 3001 2.336809 CCGAGATGGTAGAGCCGC 59.663 66.667 0.00 0.00 41.21 6.53
2839 3002 2.196925 AGCCGAGATGGTAGAGCCG 61.197 63.158 0.00 0.00 41.21 5.52
2840 3003 1.365633 CAGCCGAGATGGTAGAGCC 59.634 63.158 0.00 0.00 41.21 4.70
2841 3004 1.300542 GCAGCCGAGATGGTAGAGC 60.301 63.158 0.00 0.00 41.21 4.09
2842 3005 1.112315 AGGCAGCCGAGATGGTAGAG 61.112 60.000 5.55 0.00 41.21 2.43
2843 3006 1.075970 AGGCAGCCGAGATGGTAGA 60.076 57.895 5.55 0.00 41.21 2.59
2844 3007 1.068753 CAGGCAGCCGAGATGGTAG 59.931 63.158 5.55 0.00 41.21 3.18
2845 3008 3.094062 GCAGGCAGCCGAGATGGTA 62.094 63.158 5.55 0.00 41.21 3.25
2846 3009 4.479993 GCAGGCAGCCGAGATGGT 62.480 66.667 5.55 0.00 41.21 3.55
2852 3015 4.473520 GGCTTAGCAGGCAGCCGA 62.474 66.667 5.55 0.00 46.19 5.54
2858 3021 1.452833 CAGGAAGGGCTTAGCAGGC 60.453 63.158 6.53 0.00 45.20 4.85
2859 3022 0.620556 TTCAGGAAGGGCTTAGCAGG 59.379 55.000 6.53 0.00 0.00 4.85
2860 3023 2.016096 GCTTCAGGAAGGGCTTAGCAG 61.016 57.143 6.53 0.00 38.80 4.24
2861 3024 0.035056 GCTTCAGGAAGGGCTTAGCA 60.035 55.000 6.53 0.00 38.80 3.49
2862 3025 0.254462 AGCTTCAGGAAGGGCTTAGC 59.746 55.000 10.77 0.00 38.80 3.09
2863 3026 1.134250 GGAGCTTCAGGAAGGGCTTAG 60.134 57.143 10.77 0.00 38.80 2.18
2864 3027 0.912486 GGAGCTTCAGGAAGGGCTTA 59.088 55.000 10.77 0.00 38.80 3.09
2865 3028 1.688211 GGAGCTTCAGGAAGGGCTT 59.312 57.895 10.77 0.00 38.80 4.35
2866 3029 2.664081 CGGAGCTTCAGGAAGGGCT 61.664 63.158 10.77 3.58 38.80 5.19
2867 3030 2.124942 CGGAGCTTCAGGAAGGGC 60.125 66.667 10.77 0.00 38.80 5.19
2886 3049 4.459089 GGTGGAGCGGCAGAGGTC 62.459 72.222 1.45 0.00 37.86 3.85
2887 3050 3.602075 TAGGTGGAGCGGCAGAGGT 62.602 63.158 1.45 0.00 0.00 3.85
2888 3051 2.759973 TAGGTGGAGCGGCAGAGG 60.760 66.667 1.45 0.00 0.00 3.69
2889 3052 2.010582 GACTAGGTGGAGCGGCAGAG 62.011 65.000 1.45 0.00 0.00 3.35
2890 3053 2.037367 ACTAGGTGGAGCGGCAGA 59.963 61.111 1.45 0.00 0.00 4.26
2891 3054 2.351244 TGACTAGGTGGAGCGGCAG 61.351 63.158 1.45 0.00 0.00 4.85
2892 3055 2.283604 TGACTAGGTGGAGCGGCA 60.284 61.111 1.45 0.00 0.00 5.69
2893 3056 2.184579 GTGACTAGGTGGAGCGGC 59.815 66.667 0.00 0.00 0.00 6.53
2894 3057 1.668101 GAGGTGACTAGGTGGAGCGG 61.668 65.000 0.00 0.00 44.43 5.52
2895 3058 0.965866 TGAGGTGACTAGGTGGAGCG 60.966 60.000 0.00 0.00 44.43 5.03
2896 3059 1.066787 GTTGAGGTGACTAGGTGGAGC 60.067 57.143 0.00 0.00 44.43 4.70
2897 3060 1.202582 CGTTGAGGTGACTAGGTGGAG 59.797 57.143 0.00 0.00 44.43 3.86
2898 3061 1.254026 CGTTGAGGTGACTAGGTGGA 58.746 55.000 0.00 0.00 44.43 4.02
2899 3062 0.389948 GCGTTGAGGTGACTAGGTGG 60.390 60.000 0.00 0.00 44.43 4.61
2900 3063 0.603569 AGCGTTGAGGTGACTAGGTG 59.396 55.000 0.00 0.00 44.43 4.00
2901 3064 1.339097 AAGCGTTGAGGTGACTAGGT 58.661 50.000 0.00 0.00 44.43 3.08
2902 3065 2.069273 CAAAGCGTTGAGGTGACTAGG 58.931 52.381 6.52 0.00 44.43 3.02
2903 3066 1.461127 GCAAAGCGTTGAGGTGACTAG 59.539 52.381 16.93 0.00 44.43 2.57
2904 3067 1.508632 GCAAAGCGTTGAGGTGACTA 58.491 50.000 16.93 0.00 44.43 2.59
2906 3069 1.166531 AGGCAAAGCGTTGAGGTGAC 61.167 55.000 16.93 0.00 36.83 3.67
2907 3070 0.394938 TAGGCAAAGCGTTGAGGTGA 59.605 50.000 16.93 0.00 36.83 4.02
2908 3071 0.517316 GTAGGCAAAGCGTTGAGGTG 59.483 55.000 16.93 0.00 36.83 4.00
2909 3072 0.107831 TGTAGGCAAAGCGTTGAGGT 59.892 50.000 16.93 1.96 36.83 3.85
2910 3073 0.798776 CTGTAGGCAAAGCGTTGAGG 59.201 55.000 16.93 0.00 36.83 3.86
2911 3074 0.166814 GCTGTAGGCAAAGCGTTGAG 59.833 55.000 16.93 5.19 41.35 3.02
2912 3075 2.244000 GCTGTAGGCAAAGCGTTGA 58.756 52.632 16.93 0.00 41.35 3.18
2913 3076 4.847255 GCTGTAGGCAAAGCGTTG 57.153 55.556 8.11 8.11 41.35 4.10
2917 3080 3.044059 CTGGCGCTGTAGGCAAAGC 62.044 63.158 7.64 0.00 46.12 3.51
2918 3081 0.391130 TACTGGCGCTGTAGGCAAAG 60.391 55.000 7.64 0.00 46.12 2.77
2919 3082 0.672401 GTACTGGCGCTGTAGGCAAA 60.672 55.000 7.64 0.00 46.12 3.68
2920 3083 1.079405 GTACTGGCGCTGTAGGCAA 60.079 57.895 7.64 0.00 46.12 4.52
2921 3084 2.279810 TGTACTGGCGCTGTAGGCA 61.280 57.895 7.64 4.07 44.68 4.75
2922 3085 1.810030 GTGTACTGGCGCTGTAGGC 60.810 63.158 7.64 3.64 37.64 3.93
2923 3086 0.736325 GTGTGTACTGGCGCTGTAGG 60.736 60.000 7.64 0.00 0.00 3.18
2924 3087 0.736325 GGTGTGTACTGGCGCTGTAG 60.736 60.000 7.64 6.33 0.00 2.74
2925 3088 1.183030 AGGTGTGTACTGGCGCTGTA 61.183 55.000 7.64 8.57 0.00 2.74
2926 3089 1.183030 TAGGTGTGTACTGGCGCTGT 61.183 55.000 7.64 9.68 0.00 4.40
2927 3090 0.175760 ATAGGTGTGTACTGGCGCTG 59.824 55.000 7.64 2.99 0.00 5.18
2928 3091 0.460311 GATAGGTGTGTACTGGCGCT 59.540 55.000 7.64 0.00 0.00 5.92
2929 3092 0.870307 CGATAGGTGTGTACTGGCGC 60.870 60.000 0.00 0.00 0.00 6.53
2930 3093 0.454600 ACGATAGGTGTGTACTGGCG 59.545 55.000 0.00 0.00 43.77 5.69
2931 3094 1.202382 GGACGATAGGTGTGTACTGGC 60.202 57.143 0.00 0.00 43.77 4.85
2932 3095 1.065102 CGGACGATAGGTGTGTACTGG 59.935 57.143 0.00 0.00 43.77 4.00
2933 3096 1.741706 ACGGACGATAGGTGTGTACTG 59.258 52.381 0.00 0.00 43.77 2.74
2934 3097 2.119801 ACGGACGATAGGTGTGTACT 57.880 50.000 0.00 0.00 43.77 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.