Multiple sequence alignment - TraesCS6D01G043800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G043800 chr6D 100.000 3356 0 0 1 3356 18097025 18100380 0.000000e+00 6198.0
1 TraesCS6D01G043800 chr6D 87.571 177 18 3 735 910 406204731 406204904 5.680000e-48 202.0
2 TraesCS6D01G043800 chr2B 93.451 1420 62 10 964 2363 7776655 7778063 0.000000e+00 2078.0
3 TraesCS6D01G043800 chr2B 89.684 1580 107 14 915 2450 31300915 31302482 0.000000e+00 1964.0
4 TraesCS6D01G043800 chr2B 83.000 1400 171 28 983 2344 11475 10105 0.000000e+00 1205.0
5 TraesCS6D01G043800 chr2B 82.500 1400 180 27 975 2336 319425 318053 0.000000e+00 1168.0
6 TraesCS6D01G043800 chr2B 84.956 565 84 1 2789 3353 757060243 757060806 3.760000e-159 571.0
7 TraesCS6D01G043800 chr2B 86.341 410 45 8 193 598 7775855 7776257 1.430000e-118 436.0
8 TraesCS6D01G043800 chr2B 84.211 323 32 6 345 650 31300275 31300595 2.530000e-76 296.0
9 TraesCS6D01G043800 chr2B 74.944 447 102 10 2899 3340 26327721 26327280 2.640000e-46 196.0
10 TraesCS6D01G043800 chr2B 88.112 143 16 1 2592 2734 92596566 92596707 5.760000e-38 169.0
11 TraesCS6D01G043800 chr2D 89.668 1568 103 23 924 2458 2613818 2615359 0.000000e+00 1943.0
12 TraesCS6D01G043800 chr2D 92.281 1140 49 9 964 2089 2905056 2903942 0.000000e+00 1581.0
13 TraesCS6D01G043800 chr2D 93.036 359 23 2 2087 2443 2903305 2902947 1.070000e-144 523.0
14 TraesCS6D01G043800 chr2D 87.281 228 17 6 338 563 2613168 2613385 2.000000e-62 250.0
15 TraesCS6D01G043800 chr2D 90.643 171 14 2 735 904 73402882 73403051 3.370000e-55 226.0
16 TraesCS6D01G043800 chr2D 86.747 83 2 3 2281 2363 2902495 2902422 2.150000e-12 84.2
17 TraesCS6D01G043800 chr2A 81.773 1410 200 29 975 2348 1685665 1687053 0.000000e+00 1127.0
18 TraesCS6D01G043800 chr2A 82.836 134 23 0 1420 1553 32265539 32265672 1.640000e-23 121.0
19 TraesCS6D01G043800 chr7D 86.891 595 72 5 2763 3356 193494828 193495417 0.000000e+00 662.0
20 TraesCS6D01G043800 chr7D 86.919 581 76 0 2763 3343 621744732 621745312 0.000000e+00 652.0
21 TraesCS6D01G043800 chr7D 81.176 170 24 3 2597 2759 621744498 621744666 2.720000e-26 130.0
22 TraesCS6D01G043800 chr7D 92.308 39 3 0 2457 2495 574013856 574013818 4.680000e-04 56.5
23 TraesCS6D01G043800 chr5D 85.637 557 79 1 2789 3345 485379567 485379012 4.830000e-163 584.0
24 TraesCS6D01G043800 chr5D 90.058 171 13 3 734 903 230416827 230416994 5.640000e-53 219.0
25 TraesCS6D01G043800 chr4A 84.228 596 85 7 2763 3356 34028529 34029117 3.760000e-159 571.0
26 TraesCS6D01G043800 chr4A 82.099 162 23 5 2580 2741 34028295 34028450 2.100000e-27 134.0
27 TraesCS6D01G043800 chr4A 94.667 75 2 2 2457 2530 498991089 498991016 7.610000e-22 115.0
28 TraesCS6D01G043800 chr3B 82.003 589 101 2 2763 3346 704560264 704560852 2.330000e-136 496.0
29 TraesCS6D01G043800 chr3B 88.506 174 17 3 733 905 428703656 428703827 1.220000e-49 207.0
30 TraesCS6D01G043800 chr3B 78.832 137 25 4 1409 1545 20378958 20379090 4.610000e-14 89.8
31 TraesCS6D01G043800 chr3B 88.406 69 8 0 1423 1491 20278381 20278449 2.150000e-12 84.2
32 TraesCS6D01G043800 chr3D 82.832 565 83 8 2789 3353 326222806 326223356 8.360000e-136 494.0
33 TraesCS6D01G043800 chr3D 82.060 563 99 2 2792 3353 459089754 459089193 2.340000e-131 479.0
34 TraesCS6D01G043800 chr3D 88.000 75 5 2 2455 2529 130926498 130926428 5.970000e-13 86.1
35 TraesCS6D01G043800 chr5B 81.239 565 100 6 2789 3353 27802826 27802268 5.110000e-123 451.0
36 TraesCS6D01G043800 chr6A 90.361 166 14 2 738 902 5939077 5939241 2.030000e-52 217.0
37 TraesCS6D01G043800 chr6A 88.732 142 15 1 2588 2729 183214475 183214615 4.450000e-39 172.0
38 TraesCS6D01G043800 chr1D 89.535 172 13 3 735 905 289575097 289575264 2.620000e-51 213.0
39 TraesCS6D01G043800 chr1D 88.953 172 14 3 735 905 289532109 289532276 1.220000e-49 207.0
40 TraesCS6D01G043800 chr5A 88.953 172 17 2 738 908 567110803 567110973 9.430000e-51 211.0
41 TraesCS6D01G043800 chr5A 85.271 129 17 2 2600 2727 651519863 651519736 7.560000e-27 132.0
42 TraesCS6D01G043800 chr4B 89.697 165 15 1 737 901 527317258 527317420 3.390000e-50 209.0
43 TraesCS6D01G043800 chr4D 80.226 177 29 6 2552 2726 14840852 14840680 9.770000e-26 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G043800 chr6D 18097025 18100380 3355 False 6198.0 6198 100.0000 1 3356 1 chr6D.!!$F1 3355
1 TraesCS6D01G043800 chr2B 7775855 7778063 2208 False 1257.0 2078 89.8960 193 2363 2 chr2B.!!$F3 2170
2 TraesCS6D01G043800 chr2B 10105 11475 1370 True 1205.0 1205 83.0000 983 2344 1 chr2B.!!$R1 1361
3 TraesCS6D01G043800 chr2B 318053 319425 1372 True 1168.0 1168 82.5000 975 2336 1 chr2B.!!$R2 1361
4 TraesCS6D01G043800 chr2B 31300275 31302482 2207 False 1130.0 1964 86.9475 345 2450 2 chr2B.!!$F4 2105
5 TraesCS6D01G043800 chr2B 757060243 757060806 563 False 571.0 571 84.9560 2789 3353 1 chr2B.!!$F2 564
6 TraesCS6D01G043800 chr2D 2613168 2615359 2191 False 1096.5 1943 88.4745 338 2458 2 chr2D.!!$F2 2120
7 TraesCS6D01G043800 chr2D 2902422 2905056 2634 True 729.4 1581 90.6880 964 2443 3 chr2D.!!$R1 1479
8 TraesCS6D01G043800 chr2A 1685665 1687053 1388 False 1127.0 1127 81.7730 975 2348 1 chr2A.!!$F1 1373
9 TraesCS6D01G043800 chr7D 193494828 193495417 589 False 662.0 662 86.8910 2763 3356 1 chr7D.!!$F1 593
10 TraesCS6D01G043800 chr7D 621744498 621745312 814 False 391.0 652 84.0475 2597 3343 2 chr7D.!!$F2 746
11 TraesCS6D01G043800 chr5D 485379012 485379567 555 True 584.0 584 85.6370 2789 3345 1 chr5D.!!$R1 556
12 TraesCS6D01G043800 chr4A 34028295 34029117 822 False 352.5 571 83.1635 2580 3356 2 chr4A.!!$F1 776
13 TraesCS6D01G043800 chr3B 704560264 704560852 588 False 496.0 496 82.0030 2763 3346 1 chr3B.!!$F4 583
14 TraesCS6D01G043800 chr3D 326222806 326223356 550 False 494.0 494 82.8320 2789 3353 1 chr3D.!!$F1 564
15 TraesCS6D01G043800 chr3D 459089193 459089754 561 True 479.0 479 82.0600 2792 3353 1 chr3D.!!$R2 561
16 TraesCS6D01G043800 chr5B 27802268 27802826 558 True 451.0 451 81.2390 2789 3353 1 chr5B.!!$R1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.101040 GCATGCACGCACCACATTAT 59.899 50.0 14.21 0.0 0.0 1.28 F
683 1127 0.394352 AGTGAGCCGGCCCAATTAAG 60.394 55.0 26.15 0.0 0.0 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1826 2473 0.384309 GGACATGTCATAGCCGTCGA 59.616 55.0 26.47 0.0 0.0 4.20 R
2551 3875 0.108585 ACCACGTTGCTGTTGGAGAT 59.891 50.0 0.00 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.355543 CCATCCGTTCCAATTTACAGTG 57.644 45.455 0.00 0.00 0.00 3.66
22 23 3.427503 CCATCCGTTCCAATTTACAGTGC 60.428 47.826 0.00 0.00 0.00 4.40
23 24 1.801771 TCCGTTCCAATTTACAGTGCG 59.198 47.619 0.00 0.00 0.00 5.34
24 25 1.602191 CGTTCCAATTTACAGTGCGC 58.398 50.000 0.00 0.00 0.00 6.09
25 26 1.069568 CGTTCCAATTTACAGTGCGCA 60.070 47.619 5.66 5.66 0.00 6.09
26 27 2.414029 CGTTCCAATTTACAGTGCGCAT 60.414 45.455 15.91 0.00 0.00 4.73
27 28 3.181515 CGTTCCAATTTACAGTGCGCATA 60.182 43.478 15.91 0.00 0.00 3.14
28 29 4.342772 GTTCCAATTTACAGTGCGCATAG 58.657 43.478 15.91 12.36 0.00 2.23
29 30 3.867857 TCCAATTTACAGTGCGCATAGA 58.132 40.909 15.91 0.00 0.00 1.98
30 31 4.450976 TCCAATTTACAGTGCGCATAGAT 58.549 39.130 15.91 0.00 0.00 1.98
31 32 4.273235 TCCAATTTACAGTGCGCATAGATG 59.727 41.667 15.91 13.20 0.00 2.90
50 51 9.170734 CATAGATGCTAGCATTATTACCAATGT 57.829 33.333 30.08 4.91 38.04 2.71
51 52 9.745018 ATAGATGCTAGCATTATTACCAATGTT 57.255 29.630 30.08 4.43 38.04 2.71
52 53 8.469309 AGATGCTAGCATTATTACCAATGTTT 57.531 30.769 30.08 3.71 38.04 2.83
53 54 8.355169 AGATGCTAGCATTATTACCAATGTTTG 58.645 33.333 30.08 0.00 38.04 2.93
54 55 7.403312 TGCTAGCATTATTACCAATGTTTGT 57.597 32.000 14.93 0.00 38.04 2.83
55 56 7.479980 TGCTAGCATTATTACCAATGTTTGTC 58.520 34.615 14.93 0.00 38.04 3.18
56 57 7.339212 TGCTAGCATTATTACCAATGTTTGTCT 59.661 33.333 14.93 0.00 38.04 3.41
57 58 7.857885 GCTAGCATTATTACCAATGTTTGTCTC 59.142 37.037 10.63 0.00 38.04 3.36
58 59 7.701539 AGCATTATTACCAATGTTTGTCTCA 57.298 32.000 0.00 0.00 38.04 3.27
59 60 7.538575 AGCATTATTACCAATGTTTGTCTCAC 58.461 34.615 0.00 0.00 38.04 3.51
60 61 7.394359 AGCATTATTACCAATGTTTGTCTCACT 59.606 33.333 0.00 0.00 38.04 3.41
61 62 7.698130 GCATTATTACCAATGTTTGTCTCACTC 59.302 37.037 0.00 0.00 38.04 3.51
62 63 8.950210 CATTATTACCAATGTTTGTCTCACTCT 58.050 33.333 0.00 0.00 32.33 3.24
63 64 8.547967 TTATTACCAATGTTTGTCTCACTCTC 57.452 34.615 0.00 0.00 0.00 3.20
64 65 4.422073 ACCAATGTTTGTCTCACTCTCA 57.578 40.909 0.00 0.00 0.00 3.27
65 66 4.978099 ACCAATGTTTGTCTCACTCTCAT 58.022 39.130 0.00 0.00 0.00 2.90
66 67 4.758674 ACCAATGTTTGTCTCACTCTCATG 59.241 41.667 0.00 0.00 0.00 3.07
67 68 4.758674 CCAATGTTTGTCTCACTCTCATGT 59.241 41.667 0.00 0.00 0.00 3.21
68 69 5.334646 CCAATGTTTGTCTCACTCTCATGTG 60.335 44.000 0.00 0.00 39.15 3.21
69 70 3.133691 TGTTTGTCTCACTCTCATGTGC 58.866 45.455 0.00 0.00 37.81 4.57
70 71 3.133691 GTTTGTCTCACTCTCATGTGCA 58.866 45.455 0.00 0.00 37.81 4.57
71 72 3.690475 TTGTCTCACTCTCATGTGCAT 57.310 42.857 0.00 0.00 37.81 3.96
72 73 2.968675 TGTCTCACTCTCATGTGCATG 58.031 47.619 5.86 5.86 40.09 4.06
73 74 2.301009 TGTCTCACTCTCATGTGCATGT 59.699 45.455 11.38 0.00 39.72 3.21
74 75 2.671888 GTCTCACTCTCATGTGCATGTG 59.328 50.000 11.38 9.43 39.72 3.21
75 76 1.397343 CTCACTCTCATGTGCATGTGC 59.603 52.381 11.38 0.00 39.72 4.57
76 77 1.002773 TCACTCTCATGTGCATGTGCT 59.997 47.619 11.38 0.00 42.66 4.40
77 78 2.234414 TCACTCTCATGTGCATGTGCTA 59.766 45.455 11.38 0.00 42.66 3.49
78 79 3.004862 CACTCTCATGTGCATGTGCTAA 58.995 45.455 11.38 0.00 42.66 3.09
79 80 3.626217 CACTCTCATGTGCATGTGCTAAT 59.374 43.478 11.38 0.00 42.66 1.73
80 81 3.626217 ACTCTCATGTGCATGTGCTAATG 59.374 43.478 11.38 9.66 42.66 1.90
81 82 3.613030 TCTCATGTGCATGTGCTAATGT 58.387 40.909 11.38 0.00 42.66 2.71
82 83 4.768583 TCTCATGTGCATGTGCTAATGTA 58.231 39.130 11.38 1.86 42.66 2.29
83 84 5.184711 TCTCATGTGCATGTGCTAATGTAA 58.815 37.500 11.38 1.60 42.66 2.41
84 85 5.065090 TCTCATGTGCATGTGCTAATGTAAC 59.935 40.000 11.38 0.00 42.66 2.50
85 86 4.699257 TCATGTGCATGTGCTAATGTAACA 59.301 37.500 11.38 0.91 42.66 2.41
86 87 4.418013 TGTGCATGTGCTAATGTAACAC 57.582 40.909 6.55 0.00 42.66 3.32
87 88 3.190327 TGTGCATGTGCTAATGTAACACC 59.810 43.478 6.55 0.00 42.66 4.16
88 89 2.752354 TGCATGTGCTAATGTAACACCC 59.248 45.455 6.55 0.00 42.66 4.61
89 90 2.752354 GCATGTGCTAATGTAACACCCA 59.248 45.455 0.00 0.00 38.21 4.51
90 91 3.381272 GCATGTGCTAATGTAACACCCAT 59.619 43.478 0.00 0.00 38.21 4.00
91 92 4.498009 GCATGTGCTAATGTAACACCCATC 60.498 45.833 0.00 0.00 38.21 3.51
92 93 4.568072 TGTGCTAATGTAACACCCATCT 57.432 40.909 0.00 0.00 33.30 2.90
93 94 4.917385 TGTGCTAATGTAACACCCATCTT 58.083 39.130 0.00 0.00 33.30 2.40
94 95 5.321102 TGTGCTAATGTAACACCCATCTTT 58.679 37.500 0.00 0.00 33.30 2.52
95 96 5.772672 TGTGCTAATGTAACACCCATCTTTT 59.227 36.000 0.00 0.00 33.30 2.27
96 97 6.072175 TGTGCTAATGTAACACCCATCTTTTC 60.072 38.462 0.00 0.00 33.30 2.29
97 98 6.007076 TGCTAATGTAACACCCATCTTTTCA 58.993 36.000 0.00 0.00 0.00 2.69
98 99 6.150976 TGCTAATGTAACACCCATCTTTTCAG 59.849 38.462 0.00 0.00 0.00 3.02
99 100 5.391312 AATGTAACACCCATCTTTTCAGC 57.609 39.130 0.00 0.00 0.00 4.26
100 101 4.098914 TGTAACACCCATCTTTTCAGCT 57.901 40.909 0.00 0.00 0.00 4.24
101 102 5.235850 TGTAACACCCATCTTTTCAGCTA 57.764 39.130 0.00 0.00 0.00 3.32
102 103 5.626142 TGTAACACCCATCTTTTCAGCTAA 58.374 37.500 0.00 0.00 0.00 3.09
103 104 5.705441 TGTAACACCCATCTTTTCAGCTAAG 59.295 40.000 0.00 0.00 0.00 2.18
104 105 3.690460 ACACCCATCTTTTCAGCTAAGG 58.310 45.455 0.00 0.00 0.00 2.69
105 106 3.019564 CACCCATCTTTTCAGCTAAGGG 58.980 50.000 0.00 0.00 40.88 3.95
106 107 2.649816 ACCCATCTTTTCAGCTAAGGGT 59.350 45.455 0.00 0.00 43.19 4.34
107 108 3.850173 ACCCATCTTTTCAGCTAAGGGTA 59.150 43.478 0.00 0.00 45.96 3.69
108 109 4.291249 ACCCATCTTTTCAGCTAAGGGTAA 59.709 41.667 0.00 0.00 45.96 2.85
109 110 5.044105 ACCCATCTTTTCAGCTAAGGGTAAT 60.044 40.000 0.00 0.00 45.96 1.89
110 111 5.532779 CCCATCTTTTCAGCTAAGGGTAATC 59.467 44.000 0.00 0.00 0.00 1.75
111 112 5.237344 CCATCTTTTCAGCTAAGGGTAATCG 59.763 44.000 0.00 0.00 0.00 3.34
112 113 5.416271 TCTTTTCAGCTAAGGGTAATCGT 57.584 39.130 0.00 0.00 0.00 3.73
113 114 5.801380 TCTTTTCAGCTAAGGGTAATCGTT 58.199 37.500 0.00 0.00 0.00 3.85
114 115 5.642063 TCTTTTCAGCTAAGGGTAATCGTTG 59.358 40.000 0.00 0.00 0.00 4.10
115 116 4.546829 TTCAGCTAAGGGTAATCGTTGT 57.453 40.909 0.00 0.00 0.00 3.32
116 117 4.119442 TCAGCTAAGGGTAATCGTTGTC 57.881 45.455 0.00 0.00 0.00 3.18
117 118 3.118884 TCAGCTAAGGGTAATCGTTGTCC 60.119 47.826 0.00 0.00 0.00 4.02
118 119 2.835764 AGCTAAGGGTAATCGTTGTCCA 59.164 45.455 0.00 0.00 0.00 4.02
119 120 3.262405 AGCTAAGGGTAATCGTTGTCCAA 59.738 43.478 0.00 0.00 0.00 3.53
120 121 3.621715 GCTAAGGGTAATCGTTGTCCAAG 59.378 47.826 0.00 0.00 0.00 3.61
121 122 4.622220 GCTAAGGGTAATCGTTGTCCAAGA 60.622 45.833 0.00 0.00 0.00 3.02
122 123 3.329929 AGGGTAATCGTTGTCCAAGAC 57.670 47.619 0.00 0.00 0.00 3.01
123 124 2.904434 AGGGTAATCGTTGTCCAAGACT 59.096 45.455 0.00 0.00 33.15 3.24
124 125 3.000727 GGGTAATCGTTGTCCAAGACTG 58.999 50.000 0.00 0.00 33.15 3.51
125 126 2.415512 GGTAATCGTTGTCCAAGACTGC 59.584 50.000 0.00 0.00 33.15 4.40
126 127 2.254546 AATCGTTGTCCAAGACTGCA 57.745 45.000 0.00 0.00 33.15 4.41
127 128 2.479566 ATCGTTGTCCAAGACTGCAT 57.520 45.000 0.00 0.00 33.15 3.96
128 129 1.511850 TCGTTGTCCAAGACTGCATG 58.488 50.000 0.00 0.00 33.15 4.06
129 130 0.110056 CGTTGTCCAAGACTGCATGC 60.110 55.000 11.82 11.82 33.15 4.06
130 131 0.953727 GTTGTCCAAGACTGCATGCA 59.046 50.000 21.29 21.29 33.15 3.96
131 132 0.953727 TTGTCCAAGACTGCATGCAC 59.046 50.000 18.46 8.42 33.15 4.57
132 133 1.229975 TGTCCAAGACTGCATGCACG 61.230 55.000 18.46 15.38 33.15 5.34
133 134 2.177531 CCAAGACTGCATGCACGC 59.822 61.111 18.46 11.66 0.00 5.34
134 135 2.619165 CCAAGACTGCATGCACGCA 61.619 57.895 18.46 7.45 40.32 5.24
135 136 1.441515 CAAGACTGCATGCACGCAC 60.442 57.895 18.46 8.32 36.86 5.34
136 137 2.620112 AAGACTGCATGCACGCACC 61.620 57.895 18.46 0.00 36.86 5.01
137 138 3.356267 GACTGCATGCACGCACCA 61.356 61.111 18.46 0.00 36.86 4.17
138 139 3.599792 GACTGCATGCACGCACCAC 62.600 63.158 18.46 0.00 36.86 4.16
139 140 3.662153 CTGCATGCACGCACCACA 61.662 61.111 18.46 0.00 36.86 4.17
140 141 2.984718 TGCATGCACGCACCACAT 60.985 55.556 18.46 0.00 36.86 3.21
141 142 2.259204 GCATGCACGCACCACATT 59.741 55.556 14.21 0.00 0.00 2.71
142 143 1.239968 TGCATGCACGCACCACATTA 61.240 50.000 18.46 0.00 36.86 1.90
143 144 0.101040 GCATGCACGCACCACATTAT 59.899 50.000 14.21 0.00 0.00 1.28
144 145 1.333308 GCATGCACGCACCACATTATA 59.667 47.619 14.21 0.00 0.00 0.98
145 146 2.602933 GCATGCACGCACCACATTATAG 60.603 50.000 14.21 0.00 0.00 1.31
146 147 2.682155 TGCACGCACCACATTATAGA 57.318 45.000 0.00 0.00 0.00 1.98
147 148 2.979240 TGCACGCACCACATTATAGAA 58.021 42.857 0.00 0.00 0.00 2.10
148 149 3.540617 TGCACGCACCACATTATAGAAT 58.459 40.909 0.00 0.00 0.00 2.40
149 150 3.944650 TGCACGCACCACATTATAGAATT 59.055 39.130 0.00 0.00 0.00 2.17
150 151 4.397730 TGCACGCACCACATTATAGAATTT 59.602 37.500 0.00 0.00 0.00 1.82
151 152 4.734854 GCACGCACCACATTATAGAATTTG 59.265 41.667 0.00 0.00 0.00 2.32
152 153 5.273170 CACGCACCACATTATAGAATTTGG 58.727 41.667 12.65 12.65 45.07 3.28
153 154 4.338118 ACGCACCACATTATAGAATTTGGG 59.662 41.667 17.31 8.97 44.22 4.12
154 155 4.620982 GCACCACATTATAGAATTTGGGC 58.379 43.478 17.31 13.74 44.22 5.36
155 156 4.099266 GCACCACATTATAGAATTTGGGCA 59.901 41.667 17.31 0.00 44.22 5.36
156 157 5.395103 GCACCACATTATAGAATTTGGGCAA 60.395 40.000 17.31 0.00 44.22 4.52
157 158 6.638610 CACCACATTATAGAATTTGGGCAAA 58.361 36.000 17.31 0.00 44.22 3.68
158 159 7.102346 CACCACATTATAGAATTTGGGCAAAA 58.898 34.615 17.31 0.00 44.22 2.44
159 160 7.605691 CACCACATTATAGAATTTGGGCAAAAA 59.394 33.333 17.31 0.00 44.22 1.94
160 161 7.823799 ACCACATTATAGAATTTGGGCAAAAAG 59.176 33.333 17.31 0.00 44.22 2.27
161 162 7.201635 CCACATTATAGAATTTGGGCAAAAAGC 60.202 37.037 7.28 0.00 38.67 3.51
162 163 7.550196 CACATTATAGAATTTGGGCAAAAAGCT 59.450 33.333 0.00 0.00 44.79 3.74
163 164 8.757877 ACATTATAGAATTTGGGCAAAAAGCTA 58.242 29.630 0.00 0.00 44.79 3.32
164 165 9.252962 CATTATAGAATTTGGGCAAAAAGCTAG 57.747 33.333 0.00 0.00 44.79 3.42
165 166 6.857437 ATAGAATTTGGGCAAAAAGCTAGT 57.143 33.333 0.00 0.00 44.79 2.57
166 167 7.954666 ATAGAATTTGGGCAAAAAGCTAGTA 57.045 32.000 0.00 0.00 44.79 1.82
167 168 6.272822 AGAATTTGGGCAAAAAGCTAGTAG 57.727 37.500 0.00 0.00 44.79 2.57
168 169 5.185828 AGAATTTGGGCAAAAAGCTAGTAGG 59.814 40.000 0.00 0.00 44.79 3.18
169 170 1.834188 TGGGCAAAAAGCTAGTAGGC 58.166 50.000 0.00 0.00 44.79 3.93
170 171 1.354368 TGGGCAAAAAGCTAGTAGGCT 59.646 47.619 0.00 0.00 45.30 4.58
182 183 5.810095 AGCTAGTAGGCTTTCTCAAAATGT 58.190 37.500 0.00 0.00 39.86 2.71
183 184 5.645497 AGCTAGTAGGCTTTCTCAAAATGTG 59.355 40.000 0.00 0.00 39.86 3.21
184 185 5.643777 GCTAGTAGGCTTTCTCAAAATGTGA 59.356 40.000 0.00 0.00 34.17 3.58
185 186 8.274688 AGCTAGTAGGCTTTCTCAAAATGTGAG 61.275 40.741 0.00 0.00 46.50 3.51
214 215 2.473984 GCTTGCTCAAAATGTGAAGCAC 59.526 45.455 0.00 0.00 38.95 4.40
241 242 4.223032 TGTGGTTTTGTGCTTCCCTAAAAA 59.777 37.500 0.00 0.00 0.00 1.94
242 243 4.569162 GTGGTTTTGTGCTTCCCTAAAAAC 59.431 41.667 0.00 0.00 39.08 2.43
243 244 3.799963 GGTTTTGTGCTTCCCTAAAAACG 59.200 43.478 0.00 0.00 40.14 3.60
244 245 4.440387 GGTTTTGTGCTTCCCTAAAAACGA 60.440 41.667 0.00 0.00 40.14 3.85
287 288 5.140177 CGTGAAAGCACAACTATTCTTCAC 58.860 41.667 0.00 0.00 45.41 3.18
316 317 2.874086 TGAAGCACTGATGTGTGTGAAG 59.126 45.455 0.00 0.00 45.44 3.02
317 318 2.916702 AGCACTGATGTGTGTGAAGA 57.083 45.000 0.00 0.00 45.44 2.87
318 319 2.763933 AGCACTGATGTGTGTGAAGAG 58.236 47.619 0.00 0.00 45.44 2.85
319 320 1.196354 GCACTGATGTGTGTGAAGAGC 59.804 52.381 0.00 0.00 45.44 4.09
427 429 9.778993 TCTGTAAACGAATGTAACTATACTGAC 57.221 33.333 0.00 0.00 32.98 3.51
482 484 2.841215 GCGTATGCCTACCCAAATACA 58.159 47.619 0.00 0.00 33.98 2.29
639 832 8.905702 GCATTTCAAGTGTGACAAATTAAGTAG 58.094 33.333 0.00 0.00 31.90 2.57
669 1113 5.237815 TGTATTTCAAGTGGCACTAGTGAG 58.762 41.667 27.08 8.90 0.00 3.51
680 1124 1.224592 CTAGTGAGCCGGCCCAATT 59.775 57.895 26.15 12.36 0.00 2.32
683 1127 0.394352 AGTGAGCCGGCCCAATTAAG 60.394 55.000 26.15 0.00 0.00 1.85
686 1130 1.134220 TGAGCCGGCCCAATTAAGTAG 60.134 52.381 26.15 0.00 0.00 2.57
687 1131 1.140252 GAGCCGGCCCAATTAAGTAGA 59.860 52.381 26.15 0.00 0.00 2.59
688 1132 1.141053 AGCCGGCCCAATTAAGTAGAG 59.859 52.381 26.15 0.00 0.00 2.43
689 1133 1.134189 GCCGGCCCAATTAAGTAGAGT 60.134 52.381 18.11 0.00 0.00 3.24
690 1134 2.103601 GCCGGCCCAATTAAGTAGAGTA 59.896 50.000 18.11 0.00 0.00 2.59
691 1135 3.432608 GCCGGCCCAATTAAGTAGAGTAA 60.433 47.826 18.11 0.00 0.00 2.24
693 1137 5.374071 CCGGCCCAATTAAGTAGAGTAAAT 58.626 41.667 0.00 0.00 0.00 1.40
694 1138 5.238650 CCGGCCCAATTAAGTAGAGTAAATG 59.761 44.000 0.00 0.00 0.00 2.32
695 1139 5.277828 CGGCCCAATTAAGTAGAGTAAATGC 60.278 44.000 0.00 0.00 0.00 3.56
696 1140 5.592688 GGCCCAATTAAGTAGAGTAAATGCA 59.407 40.000 0.00 0.00 0.00 3.96
697 1141 6.265422 GGCCCAATTAAGTAGAGTAAATGCAT 59.735 38.462 0.00 0.00 0.00 3.96
698 1142 7.141363 GCCCAATTAAGTAGAGTAAATGCATG 58.859 38.462 0.00 0.00 0.00 4.06
700 1144 7.013655 CCCAATTAAGTAGAGTAAATGCATGCT 59.986 37.037 20.33 0.40 0.00 3.79
701 1145 8.408601 CCAATTAAGTAGAGTAAATGCATGCTT 58.591 33.333 20.33 10.16 0.00 3.91
702 1146 9.443283 CAATTAAGTAGAGTAAATGCATGCTTC 57.557 33.333 20.33 6.97 0.00 3.86
703 1147 8.737168 ATTAAGTAGAGTAAATGCATGCTTCA 57.263 30.769 20.33 0.00 0.00 3.02
704 1148 6.428385 AAGTAGAGTAAATGCATGCTTCAC 57.572 37.500 20.33 13.59 0.00 3.18
705 1149 5.491070 AGTAGAGTAAATGCATGCTTCACA 58.509 37.500 20.33 0.00 0.00 3.58
706 1150 5.939883 AGTAGAGTAAATGCATGCTTCACAA 59.060 36.000 20.33 0.00 0.00 3.33
707 1151 5.710513 AGAGTAAATGCATGCTTCACAAA 57.289 34.783 20.33 0.00 0.00 2.83
708 1152 6.276832 AGAGTAAATGCATGCTTCACAAAT 57.723 33.333 20.33 0.00 0.00 2.32
709 1153 6.694447 AGAGTAAATGCATGCTTCACAAATT 58.306 32.000 20.33 5.27 0.00 1.82
710 1154 7.829725 AGAGTAAATGCATGCTTCACAAATTA 58.170 30.769 20.33 4.30 0.00 1.40
711 1155 8.306038 AGAGTAAATGCATGCTTCACAAATTAA 58.694 29.630 20.33 0.00 0.00 1.40
712 1156 8.470040 AGTAAATGCATGCTTCACAAATTAAG 57.530 30.769 20.33 0.00 0.00 1.85
713 1157 8.090214 AGTAAATGCATGCTTCACAAATTAAGT 58.910 29.630 20.33 0.00 0.00 2.24
714 1158 9.352784 GTAAATGCATGCTTCACAAATTAAGTA 57.647 29.630 20.33 0.00 0.00 2.24
715 1159 8.470040 AAATGCATGCTTCACAAATTAAGTAG 57.530 30.769 20.33 0.00 0.00 2.57
742 1186 6.512342 ACATACTCCGCTTGTATATACTCC 57.488 41.667 13.89 2.01 0.00 3.85
746 1227 3.428532 TCCGCTTGTATATACTCCCTCC 58.571 50.000 13.89 0.00 0.00 4.30
749 1230 3.255149 CGCTTGTATATACTCCCTCCGTT 59.745 47.826 13.89 0.00 0.00 4.44
750 1231 4.615452 CGCTTGTATATACTCCCTCCGTTC 60.615 50.000 13.89 0.00 0.00 3.95
751 1232 4.321824 GCTTGTATATACTCCCTCCGTTCC 60.322 50.000 13.89 0.00 0.00 3.62
754 1235 6.204852 TGTATATACTCCCTCCGTTCCTAA 57.795 41.667 13.89 0.00 0.00 2.69
761 1242 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
763 1244 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
766 1247 7.015001 TCCCTCCGTTCCTAAATATAAGTCTTC 59.985 40.741 0.00 0.00 0.00 2.87
767 1248 7.153315 CCTCCGTTCCTAAATATAAGTCTTCC 58.847 42.308 0.00 0.00 0.00 3.46
768 1249 7.015389 CCTCCGTTCCTAAATATAAGTCTTCCT 59.985 40.741 0.00 0.00 0.00 3.36
771 1252 8.305317 CCGTTCCTAAATATAAGTCTTCCTAGG 58.695 40.741 0.82 0.82 0.00 3.02
772 1253 9.075678 CGTTCCTAAATATAAGTCTTCCTAGGA 57.924 37.037 7.62 7.62 33.51 2.94
786 1267 9.577222 AGTCTTCCTAGGAATTACACTATAGAC 57.423 37.037 24.48 21.14 33.28 2.59
787 1268 9.577222 GTCTTCCTAGGAATTACACTATAGACT 57.423 37.037 24.48 0.00 33.28 3.24
795 1276 9.228949 AGGAATTACACTATAGACTACATACGG 57.771 37.037 6.78 0.00 0.00 4.02
796 1277 9.224267 GGAATTACACTATAGACTACATACGGA 57.776 37.037 6.78 0.00 0.00 4.69
798 1279 7.664082 TTACACTATAGACTACATACGGAGC 57.336 40.000 6.78 0.00 0.00 4.70
800 1281 6.060136 ACACTATAGACTACATACGGAGCAA 58.940 40.000 6.78 0.00 0.00 3.91
801 1282 6.544931 ACACTATAGACTACATACGGAGCAAA 59.455 38.462 6.78 0.00 0.00 3.68
803 1284 8.082852 CACTATAGACTACATACGGAGCAAAAT 58.917 37.037 6.78 0.00 0.00 1.82
804 1285 8.082852 ACTATAGACTACATACGGAGCAAAATG 58.917 37.037 6.78 0.00 0.00 2.32
805 1286 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
806 1287 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
807 1288 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
809 1290 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
810 1291 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
811 1292 4.154195 ACATACGGAGCAAAATGAGTGAAC 59.846 41.667 0.00 0.00 0.00 3.18
812 1293 1.880027 ACGGAGCAAAATGAGTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
813 1294 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
814 1295 3.244422 ACGGAGCAAAATGAGTGAACCTA 60.244 43.478 0.00 0.00 0.00 3.08
816 1297 4.034510 CGGAGCAAAATGAGTGAACCTATC 59.965 45.833 0.00 0.00 0.00 2.08
817 1298 4.943705 GGAGCAAAATGAGTGAACCTATCA 59.056 41.667 0.00 0.00 35.05 2.15
819 1300 6.238593 GGAGCAAAATGAGTGAACCTATCATC 60.239 42.308 0.00 0.00 40.97 2.92
821 1302 7.568349 AGCAAAATGAGTGAACCTATCATCTA 58.432 34.615 0.00 0.00 40.97 1.98
823 1304 8.677300 GCAAAATGAGTGAACCTATCATCTAAA 58.323 33.333 0.00 0.00 40.97 1.85
827 1308 9.606631 AATGAGTGAACCTATCATCTAAAAGAC 57.393 33.333 0.00 0.00 40.97 3.01
828 1309 7.258441 TGAGTGAACCTATCATCTAAAAGACG 58.742 38.462 0.00 0.00 40.97 4.18
830 1311 7.259161 AGTGAACCTATCATCTAAAAGACGTC 58.741 38.462 7.70 7.70 40.97 4.34
831 1312 7.122948 AGTGAACCTATCATCTAAAAGACGTCT 59.877 37.037 13.58 13.58 40.97 4.18
832 1313 8.404000 GTGAACCTATCATCTAAAAGACGTCTA 58.596 37.037 20.39 2.37 40.97 2.59
833 1314 8.404000 TGAACCTATCATCTAAAAGACGTCTAC 58.596 37.037 20.39 0.00 31.50 2.59
834 1315 7.876936 ACCTATCATCTAAAAGACGTCTACA 57.123 36.000 20.39 6.00 0.00 2.74
836 1317 9.570468 ACCTATCATCTAAAAGACGTCTACATA 57.430 33.333 20.39 11.13 0.00 2.29
837 1318 9.828852 CCTATCATCTAAAAGACGTCTACATAC 57.171 37.037 20.39 0.00 0.00 2.39
841 1322 7.648112 TCATCTAAAAGACGTCTACATACATGC 59.352 37.037 20.39 0.00 0.00 4.06
843 1324 4.365899 AAAGACGTCTACATACATGCGA 57.634 40.909 20.39 0.00 0.00 5.10
844 1325 4.365899 AAGACGTCTACATACATGCGAA 57.634 40.909 20.39 0.00 0.00 4.70
845 1326 4.569761 AGACGTCTACATACATGCGAAT 57.430 40.909 18.46 0.00 0.00 3.34
848 1329 5.008316 AGACGTCTACATACATGCGAATGTA 59.992 40.000 18.57 18.57 40.79 2.29
855 1336 6.735678 ACATACATGCGAATGTAGTTTTCA 57.264 33.333 20.67 0.00 39.99 2.69
856 1337 7.320443 ACATACATGCGAATGTAGTTTTCAT 57.680 32.000 20.67 1.26 39.99 2.57
857 1338 8.432110 ACATACATGCGAATGTAGTTTTCATA 57.568 30.769 20.67 0.00 39.99 2.15
859 1340 6.985188 ACATGCGAATGTAGTTTTCATAGT 57.015 33.333 7.43 0.00 32.14 2.12
860 1341 6.775088 ACATGCGAATGTAGTTTTCATAGTG 58.225 36.000 7.43 0.00 32.14 2.74
861 1342 5.794687 TGCGAATGTAGTTTTCATAGTGG 57.205 39.130 0.00 0.00 0.00 4.00
862 1343 5.483811 TGCGAATGTAGTTTTCATAGTGGA 58.516 37.500 0.00 0.00 0.00 4.02
864 1345 6.597672 TGCGAATGTAGTTTTCATAGTGGAAT 59.402 34.615 0.00 0.00 0.00 3.01
944 1534 4.079615 ACCATGATCCATTCCACATCAAGA 60.080 41.667 0.00 0.00 30.43 3.02
945 1535 4.277672 CCATGATCCATTCCACATCAAGAC 59.722 45.833 0.00 0.00 30.43 3.01
948 1538 3.694043 TCCATTCCACATCAAGACGAA 57.306 42.857 0.00 0.00 0.00 3.85
1008 1598 2.141517 CTAGCAATCCCGATGAGCTTG 58.858 52.381 9.37 5.31 35.51 4.01
1080 1673 3.998672 GTGCCCGGGAAGACGACA 61.999 66.667 29.31 7.84 35.47 4.35
1090 1683 1.344942 GAAGACGACAGCGACGCAAT 61.345 55.000 23.70 9.31 41.64 3.56
1192 1785 2.124570 CCGTGGAGGCCATCAAGG 60.125 66.667 5.01 10.76 35.28 3.61
1581 2192 0.615331 ATGATGTCTTGGTGCCGTCT 59.385 50.000 0.00 0.00 0.00 4.18
1728 2339 1.153745 GCTCAAGCTCATCGACCGT 60.154 57.895 0.00 0.00 38.21 4.83
1777 2424 2.355363 CAACGTTCGAGGCCACGA 60.355 61.111 21.89 21.89 39.76 4.35
2049 2708 1.221293 GCTGCTGAGAGGCATGAGT 59.779 57.895 0.00 0.00 41.63 3.41
2125 3423 1.079681 GGGTACAACGCGGTGATGA 60.080 57.895 34.07 12.92 0.00 2.92
2235 3536 1.812093 GCCGTGCATGGCGTTAGTA 60.812 57.895 33.04 0.00 46.75 1.82
2388 3690 2.545742 GGAACTGAATTGTTGGTGGCAC 60.546 50.000 9.70 9.70 0.00 5.01
2395 3703 1.152989 TTGTTGGTGGCACGTACGTC 61.153 55.000 19.94 13.15 0.00 4.34
2454 3778 5.557866 AGTTGTTCCAGTGAATAAGGTACC 58.442 41.667 2.73 2.73 33.01 3.34
2458 3782 3.533146 TCCAGTGAATAAGGTACCCCAA 58.467 45.455 8.74 0.00 0.00 4.12
2459 3783 4.116113 TCCAGTGAATAAGGTACCCCAAT 58.884 43.478 8.74 0.00 0.00 3.16
2460 3784 5.290335 TCCAGTGAATAAGGTACCCCAATA 58.710 41.667 8.74 0.00 0.00 1.90
2461 3785 5.732170 TCCAGTGAATAAGGTACCCCAATAA 59.268 40.000 8.74 0.00 0.00 1.40
2462 3786 6.391649 TCCAGTGAATAAGGTACCCCAATAAT 59.608 38.462 8.74 0.00 0.00 1.28
2464 3788 6.016276 CAGTGAATAAGGTACCCCAATAATGC 60.016 42.308 8.74 0.00 0.00 3.56
2465 3789 6.068670 GTGAATAAGGTACCCCAATAATGCT 58.931 40.000 8.74 0.00 0.00 3.79
2466 3790 7.073215 AGTGAATAAGGTACCCCAATAATGCTA 59.927 37.037 8.74 0.00 0.00 3.49
2467 3791 7.722285 GTGAATAAGGTACCCCAATAATGCTAA 59.278 37.037 8.74 0.00 0.00 3.09
2469 3793 8.473358 AATAAGGTACCCCAATAATGCTAAAC 57.527 34.615 8.74 0.00 0.00 2.01
2470 3794 5.459982 AGGTACCCCAATAATGCTAAACA 57.540 39.130 8.74 0.00 0.00 2.83
2471 3795 6.025793 AGGTACCCCAATAATGCTAAACAT 57.974 37.500 8.74 0.00 42.30 2.71
2472 3796 7.156694 AGGTACCCCAATAATGCTAAACATA 57.843 36.000 8.74 0.00 38.34 2.29
2473 3797 7.002276 AGGTACCCCAATAATGCTAAACATAC 58.998 38.462 8.74 0.00 38.34 2.39
2474 3798 6.773685 GGTACCCCAATAATGCTAAACATACA 59.226 38.462 0.00 0.00 38.34 2.29
2475 3799 7.285858 GGTACCCCAATAATGCTAAACATACAA 59.714 37.037 0.00 0.00 38.34 2.41
2476 3800 7.726033 ACCCCAATAATGCTAAACATACAAA 57.274 32.000 0.00 0.00 38.34 2.83
2477 3801 7.781056 ACCCCAATAATGCTAAACATACAAAG 58.219 34.615 0.00 0.00 38.34 2.77
2478 3802 7.617723 ACCCCAATAATGCTAAACATACAAAGA 59.382 33.333 0.00 0.00 38.34 2.52
2479 3803 8.641541 CCCCAATAATGCTAAACATACAAAGAT 58.358 33.333 0.00 0.00 38.34 2.40
2486 3810 9.554724 AATGCTAAACATACAAAGATTTACACG 57.445 29.630 0.00 0.00 38.34 4.49
2487 3811 7.018826 TGCTAAACATACAAAGATTTACACGC 58.981 34.615 0.00 0.00 0.00 5.34
2488 3812 7.018826 GCTAAACATACAAAGATTTACACGCA 58.981 34.615 0.00 0.00 0.00 5.24
2489 3813 7.535940 GCTAAACATACAAAGATTTACACGCAA 59.464 33.333 0.00 0.00 0.00 4.85
2490 3814 9.554724 CTAAACATACAAAGATTTACACGCAAT 57.445 29.630 0.00 0.00 0.00 3.56
2491 3815 8.810652 AAACATACAAAGATTTACACGCAATT 57.189 26.923 0.00 0.00 0.00 2.32
2492 3816 9.900710 AAACATACAAAGATTTACACGCAATTA 57.099 25.926 0.00 0.00 0.00 1.40
2493 3817 8.889849 ACATACAAAGATTTACACGCAATTAC 57.110 30.769 0.00 0.00 0.00 1.89
2494 3818 8.508062 ACATACAAAGATTTACACGCAATTACA 58.492 29.630 0.00 0.00 0.00 2.41
2495 3819 9.502145 CATACAAAGATTTACACGCAATTACAT 57.498 29.630 0.00 0.00 0.00 2.29
2496 3820 9.716507 ATACAAAGATTTACACGCAATTACATC 57.283 29.630 0.00 0.00 0.00 3.06
2497 3821 6.740905 ACAAAGATTTACACGCAATTACATCG 59.259 34.615 0.00 0.00 0.00 3.84
2498 3822 4.833126 AGATTTACACGCAATTACATCGC 58.167 39.130 0.00 0.00 0.00 4.58
2499 3823 4.570772 AGATTTACACGCAATTACATCGCT 59.429 37.500 0.00 0.00 0.00 4.93
2500 3824 3.649870 TTACACGCAATTACATCGCTG 57.350 42.857 0.00 0.00 0.00 5.18
2501 3825 1.720805 ACACGCAATTACATCGCTGA 58.279 45.000 0.00 0.00 0.00 4.26
2502 3826 1.393539 ACACGCAATTACATCGCTGAC 59.606 47.619 0.00 0.00 0.00 3.51
2503 3827 1.660607 CACGCAATTACATCGCTGACT 59.339 47.619 0.00 0.00 0.00 3.41
2504 3828 2.857748 CACGCAATTACATCGCTGACTA 59.142 45.455 0.00 0.00 0.00 2.59
2505 3829 3.060940 CACGCAATTACATCGCTGACTAG 60.061 47.826 0.00 0.00 0.00 2.57
2506 3830 3.181490 ACGCAATTACATCGCTGACTAGA 60.181 43.478 0.00 0.00 0.00 2.43
2507 3831 3.180584 CGCAATTACATCGCTGACTAGAC 59.819 47.826 0.00 0.00 0.00 2.59
2508 3832 4.363999 GCAATTACATCGCTGACTAGACT 58.636 43.478 0.00 0.00 0.00 3.24
2509 3833 4.806247 GCAATTACATCGCTGACTAGACTT 59.194 41.667 0.00 0.00 0.00 3.01
2510 3834 5.051374 GCAATTACATCGCTGACTAGACTTC 60.051 44.000 0.00 0.00 0.00 3.01
2511 3835 6.269315 CAATTACATCGCTGACTAGACTTCT 58.731 40.000 0.00 0.00 0.00 2.85
2512 3836 5.899120 TTACATCGCTGACTAGACTTCTT 57.101 39.130 0.00 0.00 0.00 2.52
2513 3837 4.792521 ACATCGCTGACTAGACTTCTTT 57.207 40.909 0.00 0.00 0.00 2.52
2514 3838 4.739195 ACATCGCTGACTAGACTTCTTTC 58.261 43.478 0.00 0.00 0.00 2.62
2515 3839 4.461081 ACATCGCTGACTAGACTTCTTTCT 59.539 41.667 0.00 0.00 0.00 2.52
2516 3840 5.047660 ACATCGCTGACTAGACTTCTTTCTT 60.048 40.000 0.00 0.00 0.00 2.52
2517 3841 5.455056 TCGCTGACTAGACTTCTTTCTTT 57.545 39.130 0.00 0.00 0.00 2.52
2518 3842 5.462405 TCGCTGACTAGACTTCTTTCTTTC 58.538 41.667 0.00 0.00 0.00 2.62
2519 3843 5.241949 TCGCTGACTAGACTTCTTTCTTTCT 59.758 40.000 0.00 0.00 0.00 2.52
2520 3844 6.430308 TCGCTGACTAGACTTCTTTCTTTCTA 59.570 38.462 0.00 0.00 0.00 2.10
2521 3845 7.040617 TCGCTGACTAGACTTCTTTCTTTCTAA 60.041 37.037 0.00 0.00 0.00 2.10
2522 3846 7.061326 CGCTGACTAGACTTCTTTCTTTCTAAC 59.939 40.741 0.00 0.00 0.00 2.34
2523 3847 8.085909 GCTGACTAGACTTCTTTCTTTCTAACT 58.914 37.037 0.00 0.00 0.00 2.24
2529 3853 8.890124 AGACTTCTTTCTTTCTAACTAACCAC 57.110 34.615 0.00 0.00 0.00 4.16
2530 3854 7.932491 AGACTTCTTTCTTTCTAACTAACCACC 59.068 37.037 0.00 0.00 0.00 4.61
2531 3855 6.996879 ACTTCTTTCTTTCTAACTAACCACCC 59.003 38.462 0.00 0.00 0.00 4.61
2532 3856 5.872963 TCTTTCTTTCTAACTAACCACCCC 58.127 41.667 0.00 0.00 0.00 4.95
2533 3857 5.370289 TCTTTCTTTCTAACTAACCACCCCA 59.630 40.000 0.00 0.00 0.00 4.96
2534 3858 5.649970 TTCTTTCTAACTAACCACCCCAA 57.350 39.130 0.00 0.00 0.00 4.12
2535 3859 5.649970 TCTTTCTAACTAACCACCCCAAA 57.350 39.130 0.00 0.00 0.00 3.28
2536 3860 6.015991 TCTTTCTAACTAACCACCCCAAAA 57.984 37.500 0.00 0.00 0.00 2.44
2537 3861 6.433441 TCTTTCTAACTAACCACCCCAAAAA 58.567 36.000 0.00 0.00 0.00 1.94
2557 3881 6.642707 AAAAATTCAAACACGGTATCTCCA 57.357 33.333 0.00 0.00 35.57 3.86
2558 3882 6.642707 AAAATTCAAACACGGTATCTCCAA 57.357 33.333 0.00 0.00 35.57 3.53
2559 3883 5.622770 AATTCAAACACGGTATCTCCAAC 57.377 39.130 0.00 0.00 35.57 3.77
2560 3884 3.755112 TCAAACACGGTATCTCCAACA 57.245 42.857 0.00 0.00 35.57 3.33
2561 3885 3.659786 TCAAACACGGTATCTCCAACAG 58.340 45.455 0.00 0.00 35.57 3.16
2562 3886 2.094762 AACACGGTATCTCCAACAGC 57.905 50.000 0.00 0.00 35.57 4.40
2563 3887 0.973632 ACACGGTATCTCCAACAGCA 59.026 50.000 0.00 0.00 35.57 4.41
2564 3888 1.346395 ACACGGTATCTCCAACAGCAA 59.654 47.619 0.00 0.00 35.57 3.91
2565 3889 1.732259 CACGGTATCTCCAACAGCAAC 59.268 52.381 0.00 0.00 35.57 4.17
2566 3890 0.999406 CGGTATCTCCAACAGCAACG 59.001 55.000 0.00 0.00 35.57 4.10
2567 3891 1.671850 CGGTATCTCCAACAGCAACGT 60.672 52.381 0.00 0.00 35.57 3.99
2568 3892 1.732259 GGTATCTCCAACAGCAACGTG 59.268 52.381 0.00 0.00 35.97 4.49
2569 3893 1.732259 GTATCTCCAACAGCAACGTGG 59.268 52.381 0.00 0.00 0.00 4.94
2570 3894 0.108585 ATCTCCAACAGCAACGTGGT 59.891 50.000 0.00 0.00 0.00 4.16
2571 3895 0.753867 TCTCCAACAGCAACGTGGTA 59.246 50.000 0.00 0.00 0.00 3.25
2572 3896 0.865769 CTCCAACAGCAACGTGGTAC 59.134 55.000 0.00 0.00 0.00 3.34
2573 3897 0.533308 TCCAACAGCAACGTGGTACC 60.533 55.000 4.43 4.43 0.00 3.34
2574 3898 0.816018 CCAACAGCAACGTGGTACCA 60.816 55.000 11.60 11.60 0.00 3.25
2575 3899 0.306533 CAACAGCAACGTGGTACCAC 59.693 55.000 31.61 31.61 43.01 4.16
2587 3911 2.169146 GTACCACGGCGCGCTTAAT 61.169 57.895 32.29 15.27 0.00 1.40
2610 3934 1.803334 TTTCACAGCGCCGAAATAGT 58.197 45.000 2.29 0.00 0.00 2.12
2611 3935 2.658373 TTCACAGCGCCGAAATAGTA 57.342 45.000 2.29 0.00 0.00 1.82
2619 3943 4.211374 CAGCGCCGAAATAGTATTTTAGCT 59.789 41.667 20.00 17.88 0.00 3.32
2625 3949 4.663389 CGAAATAGTATTTTAGCTCGCGCC 60.663 45.833 9.47 0.00 36.60 6.53
2650 3974 1.602323 TGGTTGCTTTACCAGGCGG 60.602 57.895 2.38 0.00 43.14 6.13
2804 4201 2.103601 GCTAGACTACTCCTCGTCCTCT 59.896 54.545 0.00 0.00 0.00 3.69
2809 4206 0.747283 TACTCCTCGTCCTCTTCGGC 60.747 60.000 0.00 0.00 0.00 5.54
2817 4214 2.202756 CCTCTTCGGCGGTGTAGC 60.203 66.667 7.21 0.00 0.00 3.58
2863 4260 0.039978 CGAGGATCTTCATCGTCCCG 60.040 60.000 5.61 0.00 44.47 5.14
2864 4261 1.319541 GAGGATCTTCATCGTCCCGA 58.680 55.000 0.00 0.00 37.78 5.14
2872 4269 0.746923 TCATCGTCCCGAGTCGACAT 60.747 55.000 19.50 2.45 39.91 3.06
2877 4274 0.381089 GTCCCGAGTCGACATAGGTG 59.619 60.000 19.50 11.12 0.00 4.00
2881 4278 0.385751 CGAGTCGACATAGGTGCCAT 59.614 55.000 19.50 0.00 0.00 4.40
2888 4285 2.288457 CGACATAGGTGCCATCTCGATT 60.288 50.000 0.00 0.00 0.00 3.34
2983 4425 4.554363 CTCGTTCTCGGCGGCGAT 62.554 66.667 34.71 0.00 37.69 4.58
2997 4439 1.367840 GCGATATCCTGCGGGAAGT 59.632 57.895 20.61 10.31 45.78 3.01
3100 4605 1.297378 CGTCGCTGATTAGTCGCGA 60.297 57.895 17.87 17.87 46.13 5.87
3231 4749 0.671163 GTGGGCGGTGTCGAATGTTA 60.671 55.000 0.00 0.00 39.00 2.41
3278 4796 2.223641 GCGGATCTCCACGTAATACACA 60.224 50.000 0.00 0.00 35.14 3.72
3280 4798 3.369385 GGATCTCCACGTAATACACACG 58.631 50.000 0.00 0.00 44.80 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.427503 GCACTGTAAATTGGAACGGATGG 60.428 47.826 2.60 0.00 0.00 3.51
2 3 2.418628 CGCACTGTAAATTGGAACGGAT 59.581 45.455 2.60 0.00 0.00 4.18
4 5 1.727857 GCGCACTGTAAATTGGAACGG 60.728 52.381 0.30 0.00 0.00 4.44
6 7 2.697431 TGCGCACTGTAAATTGGAAC 57.303 45.000 5.66 0.00 0.00 3.62
7 8 4.257731 TCTATGCGCACTGTAAATTGGAA 58.742 39.130 14.90 0.00 0.00 3.53
8 9 3.867857 TCTATGCGCACTGTAAATTGGA 58.132 40.909 14.90 0.00 0.00 3.53
9 10 4.530388 CATCTATGCGCACTGTAAATTGG 58.470 43.478 14.90 0.00 0.00 3.16
10 11 3.970610 GCATCTATGCGCACTGTAAATTG 59.029 43.478 14.90 3.90 44.67 2.32
11 12 4.214980 GCATCTATGCGCACTGTAAATT 57.785 40.909 14.90 0.00 44.67 1.82
12 13 3.885484 GCATCTATGCGCACTGTAAAT 57.115 42.857 14.90 0.00 44.67 1.40
23 24 8.127327 CATTGGTAATAATGCTAGCATCTATGC 58.873 37.037 29.67 19.75 41.04 3.14
24 25 9.170734 ACATTGGTAATAATGCTAGCATCTATG 57.829 33.333 29.67 25.22 40.80 2.23
25 26 9.745018 AACATTGGTAATAATGCTAGCATCTAT 57.255 29.630 29.67 22.95 40.80 1.98
26 27 9.573166 AAACATTGGTAATAATGCTAGCATCTA 57.427 29.630 29.67 21.92 40.80 1.98
27 28 8.355169 CAAACATTGGTAATAATGCTAGCATCT 58.645 33.333 29.67 20.64 40.80 2.90
28 29 8.137437 ACAAACATTGGTAATAATGCTAGCATC 58.863 33.333 29.67 16.65 40.80 3.91
29 30 8.010733 ACAAACATTGGTAATAATGCTAGCAT 57.989 30.769 24.67 24.67 40.80 3.79
30 31 7.339212 AGACAAACATTGGTAATAATGCTAGCA 59.661 33.333 21.85 21.85 40.80 3.49
31 32 7.707104 AGACAAACATTGGTAATAATGCTAGC 58.293 34.615 8.10 8.10 40.80 3.42
32 33 8.892723 TGAGACAAACATTGGTAATAATGCTAG 58.107 33.333 0.00 0.00 40.80 3.42
33 34 8.673711 GTGAGACAAACATTGGTAATAATGCTA 58.326 33.333 0.00 0.00 40.80 3.49
34 35 7.394359 AGTGAGACAAACATTGGTAATAATGCT 59.606 33.333 0.00 0.00 40.80 3.79
35 36 7.538575 AGTGAGACAAACATTGGTAATAATGC 58.461 34.615 0.00 0.00 40.80 3.56
36 37 8.950210 AGAGTGAGACAAACATTGGTAATAATG 58.050 33.333 0.00 0.00 42.38 1.90
37 38 9.167311 GAGAGTGAGACAAACATTGGTAATAAT 57.833 33.333 0.00 0.00 34.12 1.28
38 39 8.154203 TGAGAGTGAGACAAACATTGGTAATAA 58.846 33.333 0.00 0.00 34.12 1.40
39 40 7.676004 TGAGAGTGAGACAAACATTGGTAATA 58.324 34.615 0.00 0.00 34.12 0.98
40 41 6.533730 TGAGAGTGAGACAAACATTGGTAAT 58.466 36.000 0.00 0.00 34.12 1.89
41 42 5.924356 TGAGAGTGAGACAAACATTGGTAA 58.076 37.500 0.00 0.00 34.12 2.85
42 43 5.545063 TGAGAGTGAGACAAACATTGGTA 57.455 39.130 0.00 0.00 34.12 3.25
43 44 4.422073 TGAGAGTGAGACAAACATTGGT 57.578 40.909 0.00 0.00 34.12 3.67
44 45 4.758674 ACATGAGAGTGAGACAAACATTGG 59.241 41.667 0.00 0.00 34.12 3.16
45 46 5.686834 CACATGAGAGTGAGACAAACATTG 58.313 41.667 0.00 0.00 42.05 2.82
46 47 4.214971 GCACATGAGAGTGAGACAAACATT 59.785 41.667 0.00 0.00 42.05 2.71
47 48 3.750130 GCACATGAGAGTGAGACAAACAT 59.250 43.478 0.00 0.00 42.05 2.71
48 49 3.133691 GCACATGAGAGTGAGACAAACA 58.866 45.455 0.00 0.00 42.05 2.83
49 50 3.133691 TGCACATGAGAGTGAGACAAAC 58.866 45.455 0.00 0.00 42.05 2.93
50 51 3.473923 TGCACATGAGAGTGAGACAAA 57.526 42.857 0.00 0.00 42.05 2.83
51 52 3.244318 ACATGCACATGAGAGTGAGACAA 60.244 43.478 17.19 0.00 42.05 3.18
52 53 2.301009 ACATGCACATGAGAGTGAGACA 59.699 45.455 17.19 0.00 42.05 3.41
53 54 2.671888 CACATGCACATGAGAGTGAGAC 59.328 50.000 17.19 0.00 42.05 3.36
54 55 2.933928 GCACATGCACATGAGAGTGAGA 60.934 50.000 17.19 0.00 42.05 3.27
55 56 1.397343 GCACATGCACATGAGAGTGAG 59.603 52.381 17.19 0.00 42.05 3.51
56 57 1.002773 AGCACATGCACATGAGAGTGA 59.997 47.619 17.19 0.00 45.16 3.41
57 58 1.450025 AGCACATGCACATGAGAGTG 58.550 50.000 17.19 6.17 45.16 3.51
58 59 3.339253 TTAGCACATGCACATGAGAGT 57.661 42.857 17.19 3.64 45.16 3.24
59 60 3.626217 ACATTAGCACATGCACATGAGAG 59.374 43.478 17.19 7.65 45.16 3.20
60 61 3.613030 ACATTAGCACATGCACATGAGA 58.387 40.909 17.19 0.00 45.16 3.27
61 62 5.163733 TGTTACATTAGCACATGCACATGAG 60.164 40.000 17.19 10.38 45.16 2.90
62 63 4.699257 TGTTACATTAGCACATGCACATGA 59.301 37.500 17.19 0.00 45.16 3.07
63 64 4.794762 GTGTTACATTAGCACATGCACATG 59.205 41.667 9.06 9.06 45.16 3.21
64 65 4.142403 GGTGTTACATTAGCACATGCACAT 60.142 41.667 6.64 0.00 45.16 3.21
65 66 3.190327 GGTGTTACATTAGCACATGCACA 59.810 43.478 6.64 0.00 45.16 4.57
66 67 3.427503 GGGTGTTACATTAGCACATGCAC 60.428 47.826 6.64 0.00 45.16 4.57
67 68 2.752354 GGGTGTTACATTAGCACATGCA 59.248 45.455 6.64 0.00 45.16 3.96
68 69 2.752354 TGGGTGTTACATTAGCACATGC 59.248 45.455 0.00 0.00 41.04 4.06
69 70 4.883585 AGATGGGTGTTACATTAGCACATG 59.116 41.667 0.00 0.00 41.04 3.21
70 71 5.116084 AGATGGGTGTTACATTAGCACAT 57.884 39.130 3.10 0.00 41.04 3.21
71 72 4.568072 AGATGGGTGTTACATTAGCACA 57.432 40.909 3.10 0.00 41.04 4.57
72 73 5.897377 AAAGATGGGTGTTACATTAGCAC 57.103 39.130 0.00 0.00 38.91 4.40
73 74 6.007076 TGAAAAGATGGGTGTTACATTAGCA 58.993 36.000 0.00 0.00 0.00 3.49
74 75 6.509418 TGAAAAGATGGGTGTTACATTAGC 57.491 37.500 0.00 0.00 0.00 3.09
75 76 6.375455 AGCTGAAAAGATGGGTGTTACATTAG 59.625 38.462 0.00 0.00 0.00 1.73
76 77 6.245408 AGCTGAAAAGATGGGTGTTACATTA 58.755 36.000 0.00 0.00 0.00 1.90
77 78 5.079643 AGCTGAAAAGATGGGTGTTACATT 58.920 37.500 0.00 0.00 0.00 2.71
78 79 4.666512 AGCTGAAAAGATGGGTGTTACAT 58.333 39.130 0.00 0.00 0.00 2.29
79 80 4.098914 AGCTGAAAAGATGGGTGTTACA 57.901 40.909 0.00 0.00 0.00 2.41
80 81 5.123979 CCTTAGCTGAAAAGATGGGTGTTAC 59.876 44.000 0.00 0.00 0.00 2.50
81 82 5.253330 CCTTAGCTGAAAAGATGGGTGTTA 58.747 41.667 0.00 0.00 0.00 2.41
82 83 4.082125 CCTTAGCTGAAAAGATGGGTGTT 58.918 43.478 0.00 0.00 0.00 3.32
83 84 3.562176 CCCTTAGCTGAAAAGATGGGTGT 60.562 47.826 0.00 0.00 0.00 4.16
84 85 3.019564 CCCTTAGCTGAAAAGATGGGTG 58.980 50.000 0.00 0.00 0.00 4.61
85 86 2.649816 ACCCTTAGCTGAAAAGATGGGT 59.350 45.455 0.00 0.00 41.39 4.51
86 87 3.372440 ACCCTTAGCTGAAAAGATGGG 57.628 47.619 0.00 0.00 39.26 4.00
87 88 5.237344 CGATTACCCTTAGCTGAAAAGATGG 59.763 44.000 0.00 0.00 0.00 3.51
88 89 5.817816 ACGATTACCCTTAGCTGAAAAGATG 59.182 40.000 0.00 0.00 0.00 2.90
89 90 5.990668 ACGATTACCCTTAGCTGAAAAGAT 58.009 37.500 0.00 0.00 0.00 2.40
90 91 5.416271 ACGATTACCCTTAGCTGAAAAGA 57.584 39.130 0.00 0.00 0.00 2.52
91 92 5.411669 ACAACGATTACCCTTAGCTGAAAAG 59.588 40.000 0.00 0.00 0.00 2.27
92 93 5.310451 ACAACGATTACCCTTAGCTGAAAA 58.690 37.500 0.00 0.00 0.00 2.29
93 94 4.901868 ACAACGATTACCCTTAGCTGAAA 58.098 39.130 0.00 0.00 0.00 2.69
94 95 4.501071 GACAACGATTACCCTTAGCTGAA 58.499 43.478 0.00 0.00 0.00 3.02
95 96 3.118884 GGACAACGATTACCCTTAGCTGA 60.119 47.826 0.00 0.00 0.00 4.26
96 97 3.195661 GGACAACGATTACCCTTAGCTG 58.804 50.000 0.00 0.00 0.00 4.24
97 98 2.835764 TGGACAACGATTACCCTTAGCT 59.164 45.455 0.00 0.00 0.00 3.32
98 99 3.255969 TGGACAACGATTACCCTTAGC 57.744 47.619 0.00 0.00 0.00 3.09
99 100 4.868734 GTCTTGGACAACGATTACCCTTAG 59.131 45.833 0.00 0.00 32.09 2.18
100 101 4.529377 AGTCTTGGACAACGATTACCCTTA 59.471 41.667 0.00 0.00 34.60 2.69
101 102 3.326880 AGTCTTGGACAACGATTACCCTT 59.673 43.478 0.00 0.00 34.60 3.95
102 103 2.904434 AGTCTTGGACAACGATTACCCT 59.096 45.455 0.00 0.00 34.60 4.34
103 104 3.000727 CAGTCTTGGACAACGATTACCC 58.999 50.000 0.00 0.00 34.60 3.69
104 105 2.415512 GCAGTCTTGGACAACGATTACC 59.584 50.000 0.00 0.00 34.60 2.85
105 106 3.064207 TGCAGTCTTGGACAACGATTAC 58.936 45.455 0.00 0.00 34.60 1.89
106 107 3.394674 TGCAGTCTTGGACAACGATTA 57.605 42.857 0.00 0.00 34.60 1.75
107 108 2.254546 TGCAGTCTTGGACAACGATT 57.745 45.000 0.00 0.00 34.60 3.34
108 109 2.079158 CATGCAGTCTTGGACAACGAT 58.921 47.619 0.00 0.00 34.60 3.73
109 110 1.511850 CATGCAGTCTTGGACAACGA 58.488 50.000 0.00 0.00 34.60 3.85
110 111 0.110056 GCATGCAGTCTTGGACAACG 60.110 55.000 14.21 0.00 34.60 4.10
111 112 0.953727 TGCATGCAGTCTTGGACAAC 59.046 50.000 18.46 0.00 34.60 3.32
112 113 0.953727 GTGCATGCAGTCTTGGACAA 59.046 50.000 23.41 0.00 38.17 3.18
113 114 1.229975 CGTGCATGCAGTCTTGGACA 61.230 55.000 23.41 0.00 38.17 4.02
114 115 1.499056 CGTGCATGCAGTCTTGGAC 59.501 57.895 23.41 5.54 36.04 4.02
115 116 2.327343 GCGTGCATGCAGTCTTGGA 61.327 57.895 25.86 0.00 34.15 3.53
116 117 2.177531 GCGTGCATGCAGTCTTGG 59.822 61.111 25.86 7.48 34.15 3.61
117 118 2.948323 TGCGTGCATGCAGTCTTG 59.052 55.556 29.30 9.90 40.62 3.02
123 124 1.239968 TAATGTGGTGCGTGCATGCA 61.240 50.000 29.30 29.30 43.95 3.96
124 125 0.101040 ATAATGTGGTGCGTGCATGC 59.899 50.000 24.20 24.20 0.00 4.06
125 126 2.871633 TCTATAATGTGGTGCGTGCATG 59.128 45.455 0.09 0.09 0.00 4.06
126 127 3.192541 TCTATAATGTGGTGCGTGCAT 57.807 42.857 0.00 0.00 0.00 3.96
127 128 2.682155 TCTATAATGTGGTGCGTGCA 57.318 45.000 0.00 0.00 0.00 4.57
128 129 4.552166 AATTCTATAATGTGGTGCGTGC 57.448 40.909 0.00 0.00 0.00 5.34
129 130 5.273170 CCAAATTCTATAATGTGGTGCGTG 58.727 41.667 2.47 0.00 43.22 5.34
130 131 4.338118 CCCAAATTCTATAATGTGGTGCGT 59.662 41.667 8.76 0.00 45.76 5.24
131 132 4.792704 GCCCAAATTCTATAATGTGGTGCG 60.793 45.833 8.76 0.00 45.76 5.34
132 133 4.099266 TGCCCAAATTCTATAATGTGGTGC 59.901 41.667 8.76 10.98 45.76 5.01
133 134 5.850557 TGCCCAAATTCTATAATGTGGTG 57.149 39.130 8.76 2.97 45.76 4.17
134 135 6.865834 TTTGCCCAAATTCTATAATGTGGT 57.134 33.333 8.76 0.00 45.76 4.16
135 136 7.201635 GCTTTTTGCCCAAATTCTATAATGTGG 60.202 37.037 3.49 3.49 46.48 4.17
136 137 7.550196 AGCTTTTTGCCCAAATTCTATAATGTG 59.450 33.333 0.00 0.00 44.23 3.21
137 138 7.623630 AGCTTTTTGCCCAAATTCTATAATGT 58.376 30.769 0.00 0.00 44.23 2.71
138 139 9.252962 CTAGCTTTTTGCCCAAATTCTATAATG 57.747 33.333 0.00 0.00 44.23 1.90
139 140 8.981659 ACTAGCTTTTTGCCCAAATTCTATAAT 58.018 29.630 0.00 0.00 44.23 1.28
140 141 8.361169 ACTAGCTTTTTGCCCAAATTCTATAA 57.639 30.769 0.00 0.00 44.23 0.98
141 142 7.954666 ACTAGCTTTTTGCCCAAATTCTATA 57.045 32.000 0.00 0.00 44.23 1.31
142 143 6.857437 ACTAGCTTTTTGCCCAAATTCTAT 57.143 33.333 0.00 0.00 44.23 1.98
143 144 6.377146 CCTACTAGCTTTTTGCCCAAATTCTA 59.623 38.462 0.00 0.00 44.23 2.10
144 145 5.185828 CCTACTAGCTTTTTGCCCAAATTCT 59.814 40.000 0.00 0.00 44.23 2.40
145 146 5.410924 CCTACTAGCTTTTTGCCCAAATTC 58.589 41.667 0.00 0.00 44.23 2.17
146 147 4.322725 GCCTACTAGCTTTTTGCCCAAATT 60.323 41.667 0.00 0.00 44.23 1.82
147 148 3.195610 GCCTACTAGCTTTTTGCCCAAAT 59.804 43.478 0.00 0.00 44.23 2.32
148 149 2.560981 GCCTACTAGCTTTTTGCCCAAA 59.439 45.455 0.00 0.00 44.23 3.28
149 150 2.167662 GCCTACTAGCTTTTTGCCCAA 58.832 47.619 0.00 0.00 44.23 4.12
150 151 1.354368 AGCCTACTAGCTTTTTGCCCA 59.646 47.619 0.00 0.00 41.41 5.36
151 152 2.130272 AGCCTACTAGCTTTTTGCCC 57.870 50.000 0.00 0.00 41.41 5.36
160 161 5.643777 TCACATTTTGAGAAAGCCTACTAGC 59.356 40.000 0.00 0.00 0.00 3.42
174 175 3.082698 GCACAACTGCTCACATTTTGA 57.917 42.857 0.00 0.00 40.63 2.69
185 186 1.925229 TTTTGAGCAAGCACAACTGC 58.075 45.000 4.42 0.00 44.63 4.40
186 187 3.244345 CACATTTTGAGCAAGCACAACTG 59.756 43.478 4.42 8.02 0.00 3.16
187 188 3.130869 TCACATTTTGAGCAAGCACAACT 59.869 39.130 4.42 0.00 0.00 3.16
188 189 3.446799 TCACATTTTGAGCAAGCACAAC 58.553 40.909 4.42 0.00 0.00 3.32
189 190 3.797451 TCACATTTTGAGCAAGCACAA 57.203 38.095 0.76 0.76 0.00 3.33
190 191 3.708890 CTTCACATTTTGAGCAAGCACA 58.291 40.909 0.00 0.00 34.94 4.57
191 192 2.473984 GCTTCACATTTTGAGCAAGCAC 59.526 45.455 0.00 0.00 36.14 4.40
192 193 2.101082 TGCTTCACATTTTGAGCAAGCA 59.899 40.909 0.09 0.09 41.37 3.91
193 194 2.473984 GTGCTTCACATTTTGAGCAAGC 59.526 45.455 0.00 0.00 38.95 4.01
194 195 3.708890 TGTGCTTCACATTTTGAGCAAG 58.291 40.909 0.00 0.00 39.62 4.01
195 196 3.797451 TGTGCTTCACATTTTGAGCAA 57.203 38.095 0.00 0.00 39.62 3.91
196 197 3.797451 TTGTGCTTCACATTTTGAGCA 57.203 38.095 0.11 0.00 44.16 4.26
197 198 4.508861 ACAATTGTGCTTCACATTTTGAGC 59.491 37.500 11.07 0.00 44.16 4.26
214 215 2.871633 GGGAAGCACAAAACCACAATTG 59.128 45.455 3.24 3.24 0.00 2.32
216 217 2.397597 AGGGAAGCACAAAACCACAAT 58.602 42.857 0.00 0.00 0.00 2.71
217 218 1.859302 AGGGAAGCACAAAACCACAA 58.141 45.000 0.00 0.00 0.00 3.33
230 231 3.609409 GCTGTGCTTCGTTTTTAGGGAAG 60.609 47.826 0.00 0.00 40.03 3.46
258 259 1.815840 TTGTGCTTTCACGCGTGGA 60.816 52.632 36.41 28.68 46.01 4.02
260 261 0.579630 TAGTTGTGCTTTCACGCGTG 59.420 50.000 32.76 32.76 46.01 5.34
263 264 3.813529 AGAATAGTTGTGCTTTCACGC 57.186 42.857 0.00 0.00 46.01 5.34
318 319 8.071122 TCATTTTACACAAAAAGCACTAATGC 57.929 30.769 0.00 0.00 42.50 3.56
403 405 9.911138 TTGTCAGTATAGTTACATTCGTTTACA 57.089 29.630 0.00 0.00 0.00 2.41
639 832 7.145932 AGTGCCACTTGAAATACATTTACTC 57.854 36.000 0.00 0.00 0.00 2.59
669 1113 1.134189 ACTCTACTTAATTGGGCCGGC 60.134 52.381 21.18 21.18 0.00 6.13
680 1124 7.102993 TGTGAAGCATGCATTTACTCTACTTA 58.897 34.615 21.98 0.00 0.00 2.24
683 1127 5.801350 TGTGAAGCATGCATTTACTCTAC 57.199 39.130 21.98 6.01 0.00 2.59
686 1130 6.956299 AATTTGTGAAGCATGCATTTACTC 57.044 33.333 21.98 6.71 0.00 2.59
687 1131 8.090214 ACTTAATTTGTGAAGCATGCATTTACT 58.910 29.630 21.98 0.00 0.00 2.24
688 1132 8.243289 ACTTAATTTGTGAAGCATGCATTTAC 57.757 30.769 21.98 16.88 0.00 2.01
689 1133 9.571810 CTACTTAATTTGTGAAGCATGCATTTA 57.428 29.630 21.98 5.40 0.00 1.40
690 1134 8.306038 TCTACTTAATTTGTGAAGCATGCATTT 58.694 29.630 21.98 6.12 0.00 2.32
691 1135 7.829725 TCTACTTAATTTGTGAAGCATGCATT 58.170 30.769 21.98 11.23 0.00 3.56
693 1137 6.430925 ACTCTACTTAATTTGTGAAGCATGCA 59.569 34.615 21.98 0.00 0.00 3.96
694 1138 6.846350 ACTCTACTTAATTTGTGAAGCATGC 58.154 36.000 10.51 10.51 0.00 4.06
695 1139 8.935844 TGTACTCTACTTAATTTGTGAAGCATG 58.064 33.333 0.00 0.00 0.00 4.06
696 1140 9.672673 ATGTACTCTACTTAATTTGTGAAGCAT 57.327 29.630 0.00 0.00 0.00 3.79
714 1158 8.102047 AGTATATACAAGCGGAGTATGTACTCT 58.898 37.037 19.62 8.28 45.56 3.24
715 1159 8.266392 AGTATATACAAGCGGAGTATGTACTC 57.734 38.462 19.62 10.94 45.56 2.59
742 1186 7.015389 AGGAAGACTTATATTTAGGAACGGAGG 59.985 40.741 0.00 0.00 0.00 4.30
746 1227 9.075678 TCCTAGGAAGACTTATATTTAGGAACG 57.924 37.037 9.71 0.00 34.17 3.95
760 1241 9.577222 GTCTATAGTGTAATTCCTAGGAAGACT 57.423 37.037 27.58 24.38 37.56 3.24
761 1242 9.577222 AGTCTATAGTGTAATTCCTAGGAAGAC 57.423 37.037 27.58 25.29 37.56 3.01
772 1253 8.728833 GCTCCGTATGTAGTCTATAGTGTAATT 58.271 37.037 0.00 0.00 0.00 1.40
774 1255 7.219322 TGCTCCGTATGTAGTCTATAGTGTAA 58.781 38.462 0.00 0.00 0.00 2.41
776 1257 5.618236 TGCTCCGTATGTAGTCTATAGTGT 58.382 41.667 0.00 0.00 0.00 3.55
777 1258 6.555812 TTGCTCCGTATGTAGTCTATAGTG 57.444 41.667 0.00 0.00 0.00 2.74
778 1259 7.578310 TTTTGCTCCGTATGTAGTCTATAGT 57.422 36.000 0.00 0.00 0.00 2.12
779 1260 8.297426 TCATTTTGCTCCGTATGTAGTCTATAG 58.703 37.037 0.00 0.00 0.00 1.31
780 1261 8.173542 TCATTTTGCTCCGTATGTAGTCTATA 57.826 34.615 0.00 0.00 0.00 1.31
781 1262 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
782 1263 6.096423 ACTCATTTTGCTCCGTATGTAGTCTA 59.904 38.462 0.00 0.00 0.00 2.59
783 1264 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
784 1265 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
786 1267 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
787 1268 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
788 1269 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
789 1270 4.437390 GGTTCACTCATTTTGCTCCGTATG 60.437 45.833 0.00 0.00 0.00 2.39
790 1271 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
791 1272 3.071479 GGTTCACTCATTTTGCTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
793 1274 2.154462 AGGTTCACTCATTTTGCTCCG 58.846 47.619 0.00 0.00 0.00 4.63
794 1275 4.943705 TGATAGGTTCACTCATTTTGCTCC 59.056 41.667 0.00 0.00 0.00 4.70
795 1276 6.541641 AGATGATAGGTTCACTCATTTTGCTC 59.458 38.462 0.00 0.00 37.11 4.26
796 1277 6.421485 AGATGATAGGTTCACTCATTTTGCT 58.579 36.000 0.00 0.00 37.11 3.91
797 1278 6.690194 AGATGATAGGTTCACTCATTTTGC 57.310 37.500 0.00 0.00 37.11 3.68
801 1282 9.606631 GTCTTTTAGATGATAGGTTCACTCATT 57.393 33.333 0.00 0.00 37.11 2.57
803 1284 7.093902 ACGTCTTTTAGATGATAGGTTCACTCA 60.094 37.037 3.07 0.00 37.11 3.41
804 1285 7.259161 ACGTCTTTTAGATGATAGGTTCACTC 58.741 38.462 3.07 0.00 37.11 3.51
805 1286 7.122948 AGACGTCTTTTAGATGATAGGTTCACT 59.877 37.037 13.58 0.00 37.11 3.41
806 1287 7.259161 AGACGTCTTTTAGATGATAGGTTCAC 58.741 38.462 13.58 0.00 37.11 3.18
807 1288 7.406031 AGACGTCTTTTAGATGATAGGTTCA 57.594 36.000 13.58 0.00 39.12 3.18
809 1290 8.289939 TGTAGACGTCTTTTAGATGATAGGTT 57.710 34.615 25.44 0.00 34.89 3.50
810 1291 7.876936 TGTAGACGTCTTTTAGATGATAGGT 57.123 36.000 25.44 0.00 34.89 3.08
811 1292 9.828852 GTATGTAGACGTCTTTTAGATGATAGG 57.171 37.037 25.44 0.00 34.89 2.57
814 1295 9.684448 CATGTATGTAGACGTCTTTTAGATGAT 57.316 33.333 25.44 4.28 34.89 2.45
816 1297 7.357613 CGCATGTATGTAGACGTCTTTTAGATG 60.358 40.741 25.44 22.99 37.27 2.90
817 1298 6.637254 CGCATGTATGTAGACGTCTTTTAGAT 59.363 38.462 25.44 12.32 0.00 1.98
819 1300 5.969435 TCGCATGTATGTAGACGTCTTTTAG 59.031 40.000 25.44 7.21 0.00 1.85
821 1302 4.740268 TCGCATGTATGTAGACGTCTTTT 58.260 39.130 25.44 11.32 0.00 2.27
823 1304 4.365899 TTCGCATGTATGTAGACGTCTT 57.634 40.909 25.44 8.59 0.00 3.01
824 1305 4.202020 ACATTCGCATGTATGTAGACGTCT 60.202 41.667 23.66 23.66 42.24 4.18
825 1306 4.042398 ACATTCGCATGTATGTAGACGTC 58.958 43.478 7.70 7.70 42.24 4.34
826 1307 4.041740 ACATTCGCATGTATGTAGACGT 57.958 40.909 0.00 0.00 42.24 4.34
831 1312 7.835634 TGAAAACTACATTCGCATGTATGTA 57.164 32.000 8.36 13.25 43.60 2.29
832 1313 6.735678 TGAAAACTACATTCGCATGTATGT 57.264 33.333 8.36 6.46 43.60 2.29
833 1314 8.551205 ACTATGAAAACTACATTCGCATGTATG 58.449 33.333 8.36 5.90 43.60 2.39
834 1315 8.551205 CACTATGAAAACTACATTCGCATGTAT 58.449 33.333 8.36 0.00 43.60 2.29
836 1317 6.183360 CCACTATGAAAACTACATTCGCATGT 60.183 38.462 5.87 5.87 46.07 3.21
837 1318 6.037062 TCCACTATGAAAACTACATTCGCATG 59.963 38.462 0.00 0.00 36.34 4.06
838 1319 6.112734 TCCACTATGAAAACTACATTCGCAT 58.887 36.000 0.00 0.00 0.00 4.73
841 1322 9.490663 GAAATTCCACTATGAAAACTACATTCG 57.509 33.333 0.00 0.00 0.00 3.34
873 1462 4.038883 CCCTCCGTTCCGAAATATAAGTCT 59.961 45.833 0.00 0.00 0.00 3.24
874 1463 4.038402 TCCCTCCGTTCCGAAATATAAGTC 59.962 45.833 0.00 0.00 0.00 3.01
875 1464 3.962718 TCCCTCCGTTCCGAAATATAAGT 59.037 43.478 0.00 0.00 0.00 2.24
885 1474 3.683802 AGTATATACTCCCTCCGTTCCG 58.316 50.000 9.71 0.00 0.00 4.30
886 1475 6.244654 AGTTAGTATATACTCCCTCCGTTCC 58.755 44.000 18.68 0.00 37.73 3.62
887 1476 6.939163 TGAGTTAGTATATACTCCCTCCGTTC 59.061 42.308 24.81 13.36 40.00 3.95
888 1477 6.714356 GTGAGTTAGTATATACTCCCTCCGTT 59.286 42.308 24.81 5.45 40.00 4.44
891 1480 9.398538 CATAGTGAGTTAGTATATACTCCCTCC 57.601 40.741 24.81 19.36 40.00 4.30
904 1493 8.589338 GGATCATGGTTATCATAGTGAGTTAGT 58.411 37.037 0.00 0.00 34.12 2.24
905 1494 8.588472 TGGATCATGGTTATCATAGTGAGTTAG 58.412 37.037 0.00 0.00 34.12 2.34
944 1534 2.891580 TCTAAAGCAGACAGAGGTTCGT 59.108 45.455 0.00 0.00 0.00 3.85
945 1535 3.577649 TCTAAAGCAGACAGAGGTTCG 57.422 47.619 0.00 0.00 0.00 3.95
997 1587 3.197790 CACCGCCAAGCTCATCGG 61.198 66.667 15.94 15.94 46.61 4.18
1284 1892 3.542676 ACGAACGGCACACCCTCA 61.543 61.111 0.00 0.00 0.00 3.86
1418 2029 2.426406 ATCAGCAGCATCGGGTCGA 61.426 57.895 0.00 0.00 41.13 4.20
1605 2216 3.003763 AGAGGAAGGGACACCGCC 61.004 66.667 0.00 0.00 43.47 6.13
1728 2339 2.429610 GGCCTTGTAGTCGGACTTGATA 59.570 50.000 16.95 0.00 0.00 2.15
1826 2473 0.384309 GGACATGTCATAGCCGTCGA 59.616 55.000 26.47 0.00 0.00 4.20
1947 2594 4.087892 CCGGCCACCTCTCCTGTG 62.088 72.222 2.24 0.00 0.00 3.66
1969 2616 2.047655 GTTCATGCCGTCGTCCCA 60.048 61.111 0.00 0.00 0.00 4.37
2089 3387 2.580470 CGAACGCCGCTGCTATCTG 61.580 63.158 0.00 0.00 34.43 2.90
2125 3423 2.125512 GTTCCGCCAGCTCGTCAT 60.126 61.111 0.00 0.00 0.00 3.06
2235 3536 2.679716 GTGGCTTCCCTGCAGGAT 59.320 61.111 34.91 0.00 46.94 3.24
2336 3637 2.173020 CAGGCGCACGATGCATGTA 61.173 57.895 10.83 0.00 45.36 2.29
2388 3690 0.168788 ACCACACATACGGACGTACG 59.831 55.000 20.85 20.85 40.31 3.67
2395 3703 0.953471 CCACCACACCACACATACGG 60.953 60.000 0.00 0.00 0.00 4.02
2460 3784 9.554724 CGTGTAAATCTTTGTATGTTTAGCATT 57.445 29.630 0.00 0.00 38.94 3.56
2461 3785 7.696453 GCGTGTAAATCTTTGTATGTTTAGCAT 59.304 33.333 0.00 0.00 41.42 3.79
2462 3786 7.018826 GCGTGTAAATCTTTGTATGTTTAGCA 58.981 34.615 0.00 0.00 0.00 3.49
2464 3788 8.942669 TTGCGTGTAAATCTTTGTATGTTTAG 57.057 30.769 0.00 0.00 0.00 1.85
2465 3789 9.900710 AATTGCGTGTAAATCTTTGTATGTTTA 57.099 25.926 0.00 0.00 0.00 2.01
2466 3790 8.810652 AATTGCGTGTAAATCTTTGTATGTTT 57.189 26.923 0.00 0.00 0.00 2.83
2467 3791 9.337091 GTAATTGCGTGTAAATCTTTGTATGTT 57.663 29.630 0.00 0.00 0.00 2.71
2469 3793 8.888332 TGTAATTGCGTGTAAATCTTTGTATG 57.112 30.769 0.00 0.00 0.00 2.39
2470 3794 9.716507 GATGTAATTGCGTGTAAATCTTTGTAT 57.283 29.630 0.00 0.00 0.00 2.29
2471 3795 7.900864 CGATGTAATTGCGTGTAAATCTTTGTA 59.099 33.333 0.00 0.00 0.00 2.41
2472 3796 6.740905 CGATGTAATTGCGTGTAAATCTTTGT 59.259 34.615 0.00 0.00 0.00 2.83
2473 3797 6.290540 GCGATGTAATTGCGTGTAAATCTTTG 60.291 38.462 0.00 0.00 45.14 2.77
2474 3798 5.737290 GCGATGTAATTGCGTGTAAATCTTT 59.263 36.000 0.00 0.00 45.14 2.52
2475 3799 5.263185 GCGATGTAATTGCGTGTAAATCTT 58.737 37.500 0.00 0.00 45.14 2.40
2476 3800 4.833126 GCGATGTAATTGCGTGTAAATCT 58.167 39.130 0.00 0.00 45.14 2.40
2487 3811 6.269315 AGAAGTCTAGTCAGCGATGTAATTG 58.731 40.000 0.00 0.00 0.00 2.32
2488 3812 6.458232 AGAAGTCTAGTCAGCGATGTAATT 57.542 37.500 0.00 0.00 0.00 1.40
2489 3813 6.458232 AAGAAGTCTAGTCAGCGATGTAAT 57.542 37.500 0.00 0.00 0.00 1.89
2490 3814 5.899120 AAGAAGTCTAGTCAGCGATGTAA 57.101 39.130 0.00 0.00 0.00 2.41
2491 3815 5.648526 AGAAAGAAGTCTAGTCAGCGATGTA 59.351 40.000 0.00 0.00 0.00 2.29
2492 3816 4.461081 AGAAAGAAGTCTAGTCAGCGATGT 59.539 41.667 0.00 0.00 0.00 3.06
2493 3817 4.992688 AGAAAGAAGTCTAGTCAGCGATG 58.007 43.478 0.00 0.00 0.00 3.84
2494 3818 5.652994 AAGAAAGAAGTCTAGTCAGCGAT 57.347 39.130 0.00 0.00 0.00 4.58
2495 3819 5.241949 AGAAAGAAAGAAGTCTAGTCAGCGA 59.758 40.000 0.00 0.00 0.00 4.93
2496 3820 5.465935 AGAAAGAAAGAAGTCTAGTCAGCG 58.534 41.667 0.00 0.00 0.00 5.18
2497 3821 8.085909 AGTTAGAAAGAAAGAAGTCTAGTCAGC 58.914 37.037 0.00 0.00 0.00 4.26
2503 3827 9.978044 GTGGTTAGTTAGAAAGAAAGAAGTCTA 57.022 33.333 0.00 0.00 0.00 2.59
2504 3828 7.932491 GGTGGTTAGTTAGAAAGAAAGAAGTCT 59.068 37.037 0.00 0.00 0.00 3.24
2505 3829 7.172875 GGGTGGTTAGTTAGAAAGAAAGAAGTC 59.827 40.741 0.00 0.00 0.00 3.01
2506 3830 6.996879 GGGTGGTTAGTTAGAAAGAAAGAAGT 59.003 38.462 0.00 0.00 0.00 3.01
2507 3831 6.430308 GGGGTGGTTAGTTAGAAAGAAAGAAG 59.570 42.308 0.00 0.00 0.00 2.85
2508 3832 6.126420 TGGGGTGGTTAGTTAGAAAGAAAGAA 60.126 38.462 0.00 0.00 0.00 2.52
2509 3833 5.370289 TGGGGTGGTTAGTTAGAAAGAAAGA 59.630 40.000 0.00 0.00 0.00 2.52
2510 3834 5.627135 TGGGGTGGTTAGTTAGAAAGAAAG 58.373 41.667 0.00 0.00 0.00 2.62
2511 3835 5.649970 TGGGGTGGTTAGTTAGAAAGAAA 57.350 39.130 0.00 0.00 0.00 2.52
2512 3836 5.649970 TTGGGGTGGTTAGTTAGAAAGAA 57.350 39.130 0.00 0.00 0.00 2.52
2513 3837 5.649970 TTTGGGGTGGTTAGTTAGAAAGA 57.350 39.130 0.00 0.00 0.00 2.52
2514 3838 6.718522 TTTTTGGGGTGGTTAGTTAGAAAG 57.281 37.500 0.00 0.00 0.00 2.62
2534 3858 6.642707 TGGAGATACCGTGTTTGAATTTTT 57.357 33.333 0.00 0.00 42.61 1.94
2535 3859 6.039941 TGTTGGAGATACCGTGTTTGAATTTT 59.960 34.615 0.00 0.00 42.61 1.82
2536 3860 5.533154 TGTTGGAGATACCGTGTTTGAATTT 59.467 36.000 0.00 0.00 42.61 1.82
2537 3861 5.067273 TGTTGGAGATACCGTGTTTGAATT 58.933 37.500 0.00 0.00 42.61 2.17
2538 3862 4.647611 TGTTGGAGATACCGTGTTTGAAT 58.352 39.130 0.00 0.00 42.61 2.57
2539 3863 4.062293 CTGTTGGAGATACCGTGTTTGAA 58.938 43.478 0.00 0.00 42.61 2.69
2540 3864 3.659786 CTGTTGGAGATACCGTGTTTGA 58.340 45.455 0.00 0.00 42.61 2.69
2541 3865 2.159627 GCTGTTGGAGATACCGTGTTTG 59.840 50.000 0.00 0.00 42.61 2.93
2542 3866 2.224426 TGCTGTTGGAGATACCGTGTTT 60.224 45.455 0.00 0.00 42.61 2.83
2543 3867 1.346395 TGCTGTTGGAGATACCGTGTT 59.654 47.619 0.00 0.00 42.61 3.32
2544 3868 0.973632 TGCTGTTGGAGATACCGTGT 59.026 50.000 0.00 0.00 42.61 4.49
2545 3869 1.732259 GTTGCTGTTGGAGATACCGTG 59.268 52.381 0.00 0.00 42.61 4.94
2546 3870 1.671850 CGTTGCTGTTGGAGATACCGT 60.672 52.381 0.00 0.00 42.61 4.83
2547 3871 0.999406 CGTTGCTGTTGGAGATACCG 59.001 55.000 0.00 0.00 42.61 4.02
2548 3872 1.732259 CACGTTGCTGTTGGAGATACC 59.268 52.381 0.00 0.00 39.54 2.73
2549 3873 1.732259 CCACGTTGCTGTTGGAGATAC 59.268 52.381 0.00 0.00 0.00 2.24
2550 3874 1.346395 ACCACGTTGCTGTTGGAGATA 59.654 47.619 0.00 0.00 0.00 1.98
2551 3875 0.108585 ACCACGTTGCTGTTGGAGAT 59.891 50.000 0.00 0.00 0.00 2.75
2552 3876 0.753867 TACCACGTTGCTGTTGGAGA 59.246 50.000 0.00 0.00 0.00 3.71
2553 3877 0.865769 GTACCACGTTGCTGTTGGAG 59.134 55.000 0.00 0.00 0.00 3.86
2554 3878 0.533308 GGTACCACGTTGCTGTTGGA 60.533 55.000 7.15 0.00 0.00 3.53
2555 3879 0.816018 TGGTACCACGTTGCTGTTGG 60.816 55.000 11.60 0.00 0.00 3.77
2556 3880 0.306533 GTGGTACCACGTTGCTGTTG 59.693 55.000 28.55 0.00 37.19 3.33
2557 3881 2.697819 GTGGTACCACGTTGCTGTT 58.302 52.632 28.55 0.00 37.19 3.16
2558 3882 4.449391 GTGGTACCACGTTGCTGT 57.551 55.556 28.55 0.00 37.19 4.40
2568 3892 4.799824 TAAGCGCGCCGTGGTACC 62.800 66.667 30.33 4.43 0.00 3.34
2569 3893 1.698714 AATTAAGCGCGCCGTGGTAC 61.699 55.000 30.33 0.00 0.00 3.34
2570 3894 1.020333 AAATTAAGCGCGCCGTGGTA 61.020 50.000 30.33 9.74 0.00 3.25
2571 3895 1.858372 AAAATTAAGCGCGCCGTGGT 61.858 50.000 30.33 5.49 0.00 4.16
2572 3896 0.731174 AAAAATTAAGCGCGCCGTGG 60.731 50.000 30.33 0.00 0.00 4.94
2573 3897 2.719454 AAAAATTAAGCGCGCCGTG 58.281 47.368 30.33 0.00 0.00 4.94
2594 3918 3.944422 AAATACTATTTCGGCGCTGTG 57.056 42.857 17.37 1.93 0.00 3.66
2595 3919 4.025145 GCTAAAATACTATTTCGGCGCTGT 60.025 41.667 17.37 0.00 0.00 4.40
2601 3925 4.931214 CGCGAGCTAAAATACTATTTCGG 58.069 43.478 0.00 0.00 0.00 4.30
2625 3949 0.958876 GGTAAAGCAACCACCCTCCG 60.959 60.000 0.00 0.00 39.50 4.63
2631 3955 1.579429 CGCCTGGTAAAGCAACCAC 59.421 57.895 1.78 0.00 44.68 4.16
2827 4224 3.774702 GGTGGCTCGACGCGTTTC 61.775 66.667 15.53 0.00 40.44 2.78
2863 4260 1.683917 AGATGGCACCTATGTCGACTC 59.316 52.381 17.92 1.45 30.78 3.36
2864 4261 1.683917 GAGATGGCACCTATGTCGACT 59.316 52.381 17.92 4.95 30.78 4.18
2872 4269 1.140852 CCCAAATCGAGATGGCACCTA 59.859 52.381 12.61 0.00 35.28 3.08
2877 4274 0.665298 GAAGCCCAAATCGAGATGGC 59.335 55.000 12.61 10.95 42.48 4.40
2881 4278 4.932789 CGGAAGCCCAAATCGAGA 57.067 55.556 0.00 0.00 0.00 4.04
2951 4388 1.320344 ACGAGTTATGGGCGCAGAGA 61.320 55.000 10.83 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.