Multiple sequence alignment - TraesCS6D01G042900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G042900 chr6D 100.000 2417 0 0 1 2417 17821121 17823537 0.000000e+00 4464.0
1 TraesCS6D01G042900 chr6D 85.576 1137 113 27 453 1585 17491218 17492307 0.000000e+00 1144.0
2 TraesCS6D01G042900 chr6D 77.465 710 108 34 952 1656 17485723 17486385 6.310000e-101 377.0
3 TraesCS6D01G042900 chr6D 84.884 344 40 9 2075 2416 17528104 17528437 1.070000e-88 337.0
4 TraesCS6D01G042900 chr6D 84.884 344 40 9 2075 2416 17562612 17562945 1.070000e-88 337.0
5 TraesCS6D01G042900 chr6D 84.884 344 40 9 2075 2416 17633729 17634062 1.070000e-88 337.0
6 TraesCS6D01G042900 chr6D 84.884 344 40 9 2075 2416 17636778 17637111 1.070000e-88 337.0
7 TraesCS6D01G042900 chr6D 84.884 344 40 9 2075 2416 17700431 17700764 1.070000e-88 337.0
8 TraesCS6D01G042900 chr6D 93.074 231 14 2 1 231 109066778 109067006 1.070000e-88 337.0
9 TraesCS6D01G042900 chr6D 84.682 346 37 12 2075 2416 17573278 17573611 4.980000e-87 331.0
10 TraesCS6D01G042900 chr6D 84.302 344 42 9 2075 2416 17681631 17681964 2.320000e-85 326.0
11 TraesCS6D01G042900 chr6D 84.302 344 42 9 2075 2416 17733409 17733742 2.320000e-85 326.0
12 TraesCS6D01G042900 chr6D 92.208 231 16 2 1 231 308256733 308256961 2.320000e-85 326.0
13 TraesCS6D01G042900 chr6D 84.302 344 41 10 2075 2416 17523533 17523865 8.330000e-85 324.0
14 TraesCS6D01G042900 chr6D 88.976 254 15 2 1820 2073 17509590 17509830 3.910000e-78 302.0
15 TraesCS6D01G042900 chr6D 79.394 165 21 7 1909 2072 18395755 18395907 1.180000e-18 104.0
16 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17557400 17557452 2.560000e-15 93.5
17 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17575684 17575736 2.560000e-15 93.5
18 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17582863 17582915 2.560000e-15 93.5
19 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17613791 17613843 2.560000e-15 93.5
20 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17636644 17636696 2.560000e-15 93.5
21 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17688603 17688655 2.560000e-15 93.5
22 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17700805 17700857 2.560000e-15 93.5
23 TraesCS6D01G042900 chr6D 98.113 53 1 0 2021 2073 17702837 17702889 2.560000e-15 93.5
24 TraesCS6D01G042900 chr6B 82.457 1408 153 49 313 1703 30876939 30878269 0.000000e+00 1146.0
25 TraesCS6D01G042900 chr6B 83.960 1010 100 30 698 1705 31714415 31713466 0.000000e+00 911.0
26 TraesCS6D01G042900 chr6B 85.033 755 56 29 313 1060 30734957 30735661 0.000000e+00 715.0
27 TraesCS6D01G042900 chr6B 84.901 755 57 29 313 1060 30813617 30814321 0.000000e+00 710.0
28 TraesCS6D01G042900 chr6B 84.505 697 53 28 370 1060 30655736 30656383 2.620000e-179 638.0
29 TraesCS6D01G042900 chr6B 84.294 694 60 29 370 1060 30653915 30654562 1.220000e-177 632.0
30 TraesCS6D01G042900 chr6B 84.097 698 54 27 370 1060 30651823 30652470 2.640000e-174 621.0
31 TraesCS6D01G042900 chr6B 80.496 846 106 33 869 1703 31361578 31362375 5.750000e-166 593.0
32 TraesCS6D01G042900 chr6B 80.473 845 105 30 870 1703 31395880 31396675 2.070000e-165 592.0
33 TraesCS6D01G042900 chr6B 78.916 664 96 22 995 1656 31717380 31716759 6.220000e-111 411.0
34 TraesCS6D01G042900 chr6B 88.110 328 19 9 313 639 30862459 30862767 2.930000e-99 372.0
35 TraesCS6D01G042900 chr6B 87.805 328 20 9 313 639 30718618 30718926 1.370000e-97 366.0
36 TraesCS6D01G042900 chr6B 75.777 772 120 46 866 1611 31278467 31279197 6.440000e-86 327.0
37 TraesCS6D01G042900 chr6B 79.144 187 31 6 904 1089 30872866 30873045 3.260000e-24 122.0
38 TraesCS6D01G042900 chr6B 85.393 89 13 0 1002 1090 30641194 30641282 2.560000e-15 93.5
39 TraesCS6D01G042900 chr6B 88.136 59 7 0 1855 1913 31155209 31155151 1.200000e-08 71.3
40 TraesCS6D01G042900 chr6B 88.136 59 7 0 1855 1913 31217762 31217704 1.200000e-08 71.3
41 TraesCS6D01G042900 chr6A 86.621 882 101 12 826 1699 18439318 18440190 0.000000e+00 959.0
42 TraesCS6D01G042900 chr6A 88.048 251 24 4 533 780 18439062 18439309 2.350000e-75 292.0
43 TraesCS6D01G042900 chr6A 88.108 185 19 3 313 497 18438876 18439057 1.460000e-52 217.0
44 TraesCS6D01G042900 chr2D 93.478 230 13 2 2 231 114568550 114568777 8.280000e-90 340.0
45 TraesCS6D01G042900 chr2D 93.043 230 14 2 2 231 180239257 180239030 3.850000e-88 335.0
46 TraesCS6D01G042900 chr2D 92.576 229 16 1 3 231 133343736 133343963 6.440000e-86 327.0
47 TraesCS6D01G042900 chrUn 84.593 344 41 9 2075 2416 348909148 348908815 4.980000e-87 331.0
48 TraesCS6D01G042900 chrUn 84.302 344 42 9 2075 2416 276700154 276700487 2.320000e-85 326.0
49 TraesCS6D01G042900 chr4D 92.641 231 15 2 1 231 402591939 402592167 4.980000e-87 331.0
50 TraesCS6D01G042900 chr3D 92.641 231 16 1 1 231 436121001 436121230 4.980000e-87 331.0
51 TraesCS6D01G042900 chr2A 92.275 233 15 3 1 232 181580223 181580453 6.440000e-86 327.0
52 TraesCS6D01G042900 chr1D 92.241 232 16 2 1 231 183156339 183156569 6.440000e-86 327.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G042900 chr6D 17821121 17823537 2416 False 4464.000000 4464 100.000000 1 2417 1 chr6D.!!$F13 2416
1 TraesCS6D01G042900 chr6D 17491218 17492307 1089 False 1144.000000 1144 85.576000 453 1585 1 chr6D.!!$F2 1132
2 TraesCS6D01G042900 chr6D 17485723 17486385 662 False 377.000000 377 77.465000 952 1656 1 chr6D.!!$F1 704
3 TraesCS6D01G042900 chr6D 17633729 17637111 3382 False 255.833333 337 89.293667 2021 2416 3 chr6D.!!$F18 395
4 TraesCS6D01G042900 chr6D 17573278 17575736 2458 False 212.250000 331 91.397500 2021 2416 2 chr6D.!!$F17 395
5 TraesCS6D01G042900 chr6B 30734957 30735661 704 False 715.000000 715 85.033000 313 1060 1 chr6B.!!$F3 747
6 TraesCS6D01G042900 chr6B 30813617 30814321 704 False 710.000000 710 84.901000 313 1060 1 chr6B.!!$F4 747
7 TraesCS6D01G042900 chr6B 31713466 31717380 3914 True 661.000000 911 81.438000 698 1705 2 chr6B.!!$R3 1007
8 TraesCS6D01G042900 chr6B 30872866 30878269 5403 False 634.000000 1146 80.800500 313 1703 2 chr6B.!!$F10 1390
9 TraesCS6D01G042900 chr6B 30651823 30656383 4560 False 630.333333 638 84.298667 370 1060 3 chr6B.!!$F9 690
10 TraesCS6D01G042900 chr6B 31361578 31362375 797 False 593.000000 593 80.496000 869 1703 1 chr6B.!!$F7 834
11 TraesCS6D01G042900 chr6B 31395880 31396675 795 False 592.000000 592 80.473000 870 1703 1 chr6B.!!$F8 833
12 TraesCS6D01G042900 chr6B 31278467 31279197 730 False 327.000000 327 75.777000 866 1611 1 chr6B.!!$F6 745
13 TraesCS6D01G042900 chr6A 18438876 18440190 1314 False 489.333333 959 87.592333 313 1699 3 chr6A.!!$F1 1386

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
347 4109 0.034896 GCCGAGTCCCTGTCTTTTCA 59.965 55.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1732 7664 0.038709 AAGTGCGTCTGAGTGAGAGC 60.039 55.0 0.0 0.0 0.0 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 8.947055 AATTTGTTTAGACTTGAAAATGTGCT 57.053 26.923 0.00 0.00 0.00 4.40
37 38 8.947055 ATTTGTTTAGACTTGAAAATGTGCTT 57.053 26.923 0.00 0.00 0.00 3.91
40 41 7.715657 TGTTTAGACTTGAAAATGTGCTTGAT 58.284 30.769 0.00 0.00 0.00 2.57
46 47 4.933505 TGAAAATGTGCTTGATGACCAA 57.066 36.364 0.00 0.00 0.00 3.67
48 49 4.341806 TGAAAATGTGCTTGATGACCAACT 59.658 37.500 0.00 0.00 0.00 3.16
52 53 4.558226 TGTGCTTGATGACCAACTATCT 57.442 40.909 0.00 0.00 0.00 1.98
54 55 6.239217 TGTGCTTGATGACCAACTATCTAT 57.761 37.500 0.00 0.00 0.00 1.98
56 57 6.539826 TGTGCTTGATGACCAACTATCTATTG 59.460 38.462 0.00 0.00 0.00 1.90
58 59 7.443575 GTGCTTGATGACCAACTATCTATTGAT 59.556 37.037 0.00 0.00 36.74 2.57
84 85 4.006319 AGTTTTCCTGATGAGCAGTTAGC 58.994 43.478 0.00 0.00 43.33 3.09
102 103 8.746922 CAGTTAGCTGCAATAAATTTTTCTCA 57.253 30.769 1.02 0.00 35.77 3.27
103 104 9.362539 CAGTTAGCTGCAATAAATTTTTCTCAT 57.637 29.630 1.02 0.00 35.77 2.90
120 121 8.677148 TTTTCTCATAGTATTCCTTGGTATGC 57.323 34.615 0.00 0.00 0.00 3.14
123 124 8.721133 TCTCATAGTATTCCTTGGTATGCTAA 57.279 34.615 7.80 0.00 0.00 3.09
124 125 9.326489 TCTCATAGTATTCCTTGGTATGCTAAT 57.674 33.333 7.80 0.00 0.00 1.73
125 126 9.950496 CTCATAGTATTCCTTGGTATGCTAATT 57.050 33.333 7.80 0.00 0.00 1.40
178 179 7.081857 ACCACCTAACTTTACCTATCAACAA 57.918 36.000 0.00 0.00 0.00 2.83
182 183 9.280174 CACCTAACTTTACCTATCAACAAAAGA 57.720 33.333 0.00 0.00 32.72 2.52
183 184 9.856162 ACCTAACTTTACCTATCAACAAAAGAA 57.144 29.630 0.00 0.00 32.72 2.52
224 225 9.010029 GGTTTAAGACATTACTTTTGGAGATGA 57.990 33.333 0.00 0.00 0.00 2.92
228 229 5.014123 AGACATTACTTTTGGAGATGACCCA 59.986 40.000 0.00 0.00 0.00 4.51
230 231 4.715534 TTACTTTTGGAGATGACCCACA 57.284 40.909 0.00 0.00 32.58 4.17
232 233 2.174639 ACTTTTGGAGATGACCCACACA 59.825 45.455 0.00 0.00 32.58 3.72
233 234 3.181429 ACTTTTGGAGATGACCCACACAT 60.181 43.478 0.00 0.00 32.58 3.21
249 250 2.242196 ACACATGGATAGAAACAGGGGG 59.758 50.000 0.00 0.00 0.00 5.40
258 259 2.804828 GAAACAGGGGGACGAGCAGG 62.805 65.000 0.00 0.00 0.00 4.85
259 260 3.846405 AACAGGGGGACGAGCAGGA 62.846 63.158 0.00 0.00 0.00 3.86
260 261 2.765807 CAGGGGGACGAGCAGGAT 60.766 66.667 0.00 0.00 0.00 3.24
263 264 2.501610 GGGGACGAGCAGGATCAC 59.498 66.667 0.00 0.00 0.00 3.06
264 265 2.060980 GGGGACGAGCAGGATCACT 61.061 63.158 0.00 0.00 0.00 3.41
265 266 0.755698 GGGGACGAGCAGGATCACTA 60.756 60.000 0.00 0.00 0.00 2.74
266 267 0.386113 GGGACGAGCAGGATCACTAC 59.614 60.000 0.00 0.00 0.00 2.73
270 271 1.729470 CGAGCAGGATCACTACGGCT 61.729 60.000 0.00 0.00 0.00 5.52
275 276 2.678190 GCAGGATCACTACGGCTTCTTT 60.678 50.000 0.00 0.00 0.00 2.52
285 286 1.450491 GGCTTCTTTCTCGAGGGCC 60.450 63.158 13.56 12.51 30.73 5.80
286 287 1.811679 GCTTCTTTCTCGAGGGCCG 60.812 63.158 13.56 0.00 40.25 6.13
287 288 1.592223 CTTCTTTCTCGAGGGCCGT 59.408 57.895 13.56 0.00 39.75 5.68
298 299 3.532155 GGGCCGTCGATGAGCTCT 61.532 66.667 16.19 0.00 0.00 4.09
303 304 1.300481 CCGTCGATGAGCTCTCACTA 58.700 55.000 16.19 0.00 43.11 2.74
304 305 1.671328 CCGTCGATGAGCTCTCACTAA 59.329 52.381 16.19 0.00 43.11 2.24
305 306 2.097629 CCGTCGATGAGCTCTCACTAAA 59.902 50.000 16.19 0.00 43.11 1.85
306 307 3.427638 CCGTCGATGAGCTCTCACTAAAA 60.428 47.826 16.19 0.00 43.11 1.52
308 309 4.109050 GTCGATGAGCTCTCACTAAAAGG 58.891 47.826 16.19 0.00 43.11 3.11
309 310 3.764434 TCGATGAGCTCTCACTAAAAGGT 59.236 43.478 16.19 0.00 43.11 3.50
310 311 3.862267 CGATGAGCTCTCACTAAAAGGTG 59.138 47.826 16.19 0.00 43.11 4.00
317 4079 6.354130 AGCTCTCACTAAAAGGTGTGTAAAA 58.646 36.000 0.00 0.00 38.28 1.52
347 4109 0.034896 GCCGAGTCCCTGTCTTTTCA 59.965 55.000 0.00 0.00 0.00 2.69
375 4137 5.698545 AGTTGTACTGAGCAAAGAAGTGATC 59.301 40.000 0.00 0.00 34.46 2.92
450 4212 4.974103 AACTCGTAGCATCGCATTATTC 57.026 40.909 0.00 0.00 0.00 1.75
457 4219 5.061064 CGTAGCATCGCATTATTCTAGAACC 59.939 44.000 7.48 0.00 0.00 3.62
458 4220 4.960938 AGCATCGCATTATTCTAGAACCA 58.039 39.130 7.48 0.00 0.00 3.67
459 4221 4.993584 AGCATCGCATTATTCTAGAACCAG 59.006 41.667 7.48 0.00 0.00 4.00
491 4255 3.560636 ATCATACAGTTAGCCACCACC 57.439 47.619 0.00 0.00 0.00 4.61
492 4256 2.546899 TCATACAGTTAGCCACCACCT 58.453 47.619 0.00 0.00 0.00 4.00
493 4257 2.236146 TCATACAGTTAGCCACCACCTG 59.764 50.000 0.00 0.00 0.00 4.00
494 4258 0.323629 TACAGTTAGCCACCACCTGC 59.676 55.000 0.00 0.00 0.00 4.85
495 4259 1.073025 CAGTTAGCCACCACCTGCA 59.927 57.895 0.00 0.00 0.00 4.41
496 4260 0.322816 CAGTTAGCCACCACCTGCAT 60.323 55.000 0.00 0.00 0.00 3.96
530 4294 1.406898 TCATCGCTCCTGTCATCAGAC 59.593 52.381 0.00 0.00 43.76 3.51
551 4315 3.862845 ACGGAGTCAAACAATGTTTTTGC 59.137 39.130 8.85 2.90 29.74 3.68
553 4317 4.026640 CGGAGTCAAACAATGTTTTTGCAG 60.027 41.667 8.85 0.00 34.50 4.41
554 4318 4.869861 GGAGTCAAACAATGTTTTTGCAGT 59.130 37.500 8.85 0.00 34.50 4.40
581 4345 0.603569 AGACGGTGAAGCGATCAACT 59.396 50.000 9.13 0.00 44.03 3.16
634 6493 5.220416 GCATACTCCACTATCAAACAACGAC 60.220 44.000 0.00 0.00 0.00 4.34
651 6510 3.767278 ACGACGATGAGCTTAACTAACC 58.233 45.455 0.00 0.00 0.00 2.85
666 6525 7.758980 GCTTAACTAACCACTCCTAACTAACTC 59.241 40.741 0.00 0.00 0.00 3.01
670 6529 2.824341 ACCACTCCTAACTAACTCACGG 59.176 50.000 0.00 0.00 0.00 4.94
671 6530 2.165845 CCACTCCTAACTAACTCACGGG 59.834 54.545 0.00 0.00 0.00 5.28
725 6584 1.402968 CGATCCACTTTCCAAGCCATG 59.597 52.381 0.00 0.00 0.00 3.66
754 6613 3.981211 ACGTCAGCATTTTGAGCATTTT 58.019 36.364 0.00 0.00 0.00 1.82
757 6616 4.089493 CGTCAGCATTTTGAGCATTTTCTG 59.911 41.667 0.00 0.00 0.00 3.02
891 6756 4.755411 CCAACTTATAAAGCTCGGTCAGA 58.245 43.478 0.00 0.00 0.00 3.27
943 6814 4.032104 GCAAACAAGCAACAAGAACAAGAG 59.968 41.667 0.00 0.00 0.00 2.85
974 6845 2.094906 TCGATTCGTGTGGAGATCGTTT 60.095 45.455 5.89 0.00 33.78 3.60
1050 6925 1.063649 GAAGCGTACGATGCCGAGA 59.936 57.895 21.65 0.00 39.50 4.04
1077 6952 2.125350 GCTAAGCGCCAGAGCAGT 60.125 61.111 17.99 0.00 39.83 4.40
1176 7087 1.748879 GCCAACGCCTAGGAATGCA 60.749 57.895 14.75 0.00 0.00 3.96
1185 7096 0.176680 CTAGGAATGCAGCCGTGAGT 59.823 55.000 0.00 0.00 0.00 3.41
1201 7114 0.533755 GAGTGGGAGCGGGAATGATG 60.534 60.000 0.00 0.00 0.00 3.07
1203 7116 2.192979 GGGAGCGGGAATGATGCA 59.807 61.111 0.00 0.00 0.00 3.96
1204 7117 1.895707 GGGAGCGGGAATGATGCAG 60.896 63.158 0.00 0.00 0.00 4.41
1254 7174 2.354729 CATTCCAAGTCCCGGGCA 59.645 61.111 18.49 1.10 0.00 5.36
1290 7210 2.911143 CTTATGAGGTGGCGGCCT 59.089 61.111 21.46 0.00 42.53 5.19
1398 7318 0.807496 GCTTCTTCCTCATGCGCTTT 59.193 50.000 9.73 0.00 0.00 3.51
1415 7335 2.430465 CTTTGGCTTCAAGCAGCTCTA 58.570 47.619 12.53 0.00 44.75 2.43
1464 7384 2.772287 GTTGAGAGTGGAGGACAAAGG 58.228 52.381 0.00 0.00 0.00 3.11
1479 7399 1.067354 CAAAGGAGGAGGTTGCATTGC 60.067 52.381 0.46 0.46 0.00 3.56
1523 7444 7.692460 TCTTACTCTTGTGTAGATTCGGTTA 57.308 36.000 0.00 0.00 30.92 2.85
1527 7448 5.488525 CTCTTGTGTAGATTCGGTTACCGC 61.489 50.000 20.09 5.28 38.47 5.68
1541 7463 1.833787 TACCGCTTCCCGAGGCTTTT 61.834 55.000 0.00 0.00 40.02 2.27
1547 7469 0.695924 TTCCCGAGGCTTTTGATCCA 59.304 50.000 0.00 0.00 0.00 3.41
1549 7471 1.027357 CCCGAGGCTTTTGATCCATG 58.973 55.000 0.00 0.00 0.00 3.66
1550 7472 1.408683 CCCGAGGCTTTTGATCCATGA 60.409 52.381 0.00 0.00 0.00 3.07
1551 7473 1.672881 CCGAGGCTTTTGATCCATGAC 59.327 52.381 0.00 0.00 0.00 3.06
1576 7508 0.675837 GTAAACGTCCTCAAGCCCCC 60.676 60.000 0.00 0.00 0.00 5.40
1577 7509 2.175035 TAAACGTCCTCAAGCCCCCG 62.175 60.000 0.00 0.00 0.00 5.73
1587 7519 0.953960 CAAGCCCCCGTCTTGTGTAC 60.954 60.000 0.00 0.00 36.93 2.90
1593 7525 2.413837 CCCCGTCTTGTGTACAAAGAG 58.586 52.381 16.04 7.57 35.15 2.85
1599 7531 5.107065 CCGTCTTGTGTACAAAGAGATTTCC 60.107 44.000 16.04 7.01 35.15 3.13
1602 7534 7.254795 CGTCTTGTGTACAAAGAGATTTCCTTT 60.255 37.037 16.04 0.00 35.15 3.11
1615 7547 5.954335 AGATTTCCTTTATTTGTTCCAGCG 58.046 37.500 0.00 0.00 0.00 5.18
1632 7564 3.426695 CCAGCGAAATGGAAATGTCTCAC 60.427 47.826 0.00 0.00 43.57 3.51
1656 7588 8.278408 CACGATCATAAGATGTTCTGGTATTTG 58.722 37.037 0.00 0.00 33.72 2.32
1699 7631 0.389757 GATACCCTCGCTCAACTCCC 59.610 60.000 0.00 0.00 0.00 4.30
1705 7637 1.065854 CCTCGCTCAACTCCCAAGATT 60.066 52.381 0.00 0.00 0.00 2.40
1706 7638 2.005451 CTCGCTCAACTCCCAAGATTG 58.995 52.381 0.00 0.00 0.00 2.67
1707 7639 1.623311 TCGCTCAACTCCCAAGATTGA 59.377 47.619 0.00 0.00 0.00 2.57
1708 7640 1.734465 CGCTCAACTCCCAAGATTGAC 59.266 52.381 0.00 0.00 0.00 3.18
1709 7641 2.613977 CGCTCAACTCCCAAGATTGACT 60.614 50.000 0.00 0.00 0.00 3.41
1710 7642 3.368427 CGCTCAACTCCCAAGATTGACTA 60.368 47.826 0.00 0.00 0.00 2.59
1714 7646 3.567478 ACTCCCAAGATTGACTATGCC 57.433 47.619 0.00 0.00 0.00 4.40
1717 7649 4.133078 CTCCCAAGATTGACTATGCCTTC 58.867 47.826 0.00 0.00 0.00 3.46
1719 7651 2.874701 CCAAGATTGACTATGCCTTCCG 59.125 50.000 0.00 0.00 0.00 4.30
1721 7653 3.914426 AGATTGACTATGCCTTCCGTT 57.086 42.857 0.00 0.00 0.00 4.44
1722 7654 3.535561 AGATTGACTATGCCTTCCGTTG 58.464 45.455 0.00 0.00 0.00 4.10
1723 7655 2.851263 TTGACTATGCCTTCCGTTGT 57.149 45.000 0.00 0.00 0.00 3.32
1724 7656 2.851263 TGACTATGCCTTCCGTTGTT 57.149 45.000 0.00 0.00 0.00 2.83
1725 7657 2.695359 TGACTATGCCTTCCGTTGTTC 58.305 47.619 0.00 0.00 0.00 3.18
1726 7658 2.301870 TGACTATGCCTTCCGTTGTTCT 59.698 45.455 0.00 0.00 0.00 3.01
1727 7659 2.673368 GACTATGCCTTCCGTTGTTCTG 59.327 50.000 0.00 0.00 0.00 3.02
1728 7660 2.038557 ACTATGCCTTCCGTTGTTCTGT 59.961 45.455 0.00 0.00 0.00 3.41
1729 7661 1.238439 ATGCCTTCCGTTGTTCTGTG 58.762 50.000 0.00 0.00 0.00 3.66
1730 7662 0.179234 TGCCTTCCGTTGTTCTGTGA 59.821 50.000 0.00 0.00 0.00 3.58
1731 7663 0.586802 GCCTTCCGTTGTTCTGTGAC 59.413 55.000 0.00 0.00 0.00 3.67
1732 7664 0.859232 CCTTCCGTTGTTCTGTGACG 59.141 55.000 0.00 0.00 36.61 4.35
1733 7665 0.232303 CTTCCGTTGTTCTGTGACGC 59.768 55.000 0.00 0.00 35.60 5.19
1734 7666 0.179094 TTCCGTTGTTCTGTGACGCT 60.179 50.000 0.00 0.00 35.60 5.07
1735 7667 0.596600 TCCGTTGTTCTGTGACGCTC 60.597 55.000 0.00 0.00 35.60 5.03
1736 7668 0.597637 CCGTTGTTCTGTGACGCTCT 60.598 55.000 0.00 0.00 35.60 4.09
1737 7669 0.778815 CGTTGTTCTGTGACGCTCTC 59.221 55.000 0.00 0.00 0.00 3.20
1738 7670 1.852942 GTTGTTCTGTGACGCTCTCA 58.147 50.000 0.00 0.00 0.00 3.27
1745 7677 3.393112 GTGACGCTCTCACTCAGAC 57.607 57.895 4.54 0.00 45.38 3.51
1746 7678 0.453615 GTGACGCTCTCACTCAGACG 60.454 60.000 4.54 0.00 45.38 4.18
1747 7679 1.513160 GACGCTCTCACTCAGACGC 60.513 63.158 0.00 0.00 32.21 5.19
1748 7680 2.188849 GACGCTCTCACTCAGACGCA 62.189 60.000 0.00 0.00 32.21 5.24
1749 7681 1.799519 CGCTCTCACTCAGACGCAC 60.800 63.158 0.00 0.00 0.00 5.34
1750 7682 1.583986 GCTCTCACTCAGACGCACT 59.416 57.895 0.00 0.00 0.00 4.40
1751 7683 0.038709 GCTCTCACTCAGACGCACTT 60.039 55.000 0.00 0.00 0.00 3.16
1752 7684 1.604185 GCTCTCACTCAGACGCACTTT 60.604 52.381 0.00 0.00 0.00 2.66
1753 7685 2.323959 CTCTCACTCAGACGCACTTTC 58.676 52.381 0.00 0.00 0.00 2.62
1754 7686 1.000163 TCTCACTCAGACGCACTTTCC 60.000 52.381 0.00 0.00 0.00 3.13
1755 7687 0.318699 TCACTCAGACGCACTTTCCG 60.319 55.000 0.00 0.00 0.00 4.30
1756 7688 1.664965 ACTCAGACGCACTTTCCGC 60.665 57.895 0.00 0.00 0.00 5.54
1757 7689 1.373497 CTCAGACGCACTTTCCGCT 60.373 57.895 0.00 0.00 0.00 5.52
1758 7690 1.347817 CTCAGACGCACTTTCCGCTC 61.348 60.000 0.00 0.00 0.00 5.03
1759 7691 1.664649 CAGACGCACTTTCCGCTCA 60.665 57.895 0.00 0.00 0.00 4.26
1760 7692 1.664965 AGACGCACTTTCCGCTCAC 60.665 57.895 0.00 0.00 0.00 3.51
1761 7693 2.665185 ACGCACTTTCCGCTCACC 60.665 61.111 0.00 0.00 0.00 4.02
1762 7694 3.423154 CGCACTTTCCGCTCACCC 61.423 66.667 0.00 0.00 0.00 4.61
1763 7695 3.056328 GCACTTTCCGCTCACCCC 61.056 66.667 0.00 0.00 0.00 4.95
1764 7696 2.750350 CACTTTCCGCTCACCCCT 59.250 61.111 0.00 0.00 0.00 4.79
1765 7697 1.073199 CACTTTCCGCTCACCCCTT 59.927 57.895 0.00 0.00 0.00 3.95
1766 7698 0.323629 CACTTTCCGCTCACCCCTTA 59.676 55.000 0.00 0.00 0.00 2.69
1767 7699 0.613777 ACTTTCCGCTCACCCCTTAG 59.386 55.000 0.00 0.00 0.00 2.18
1768 7700 0.902531 CTTTCCGCTCACCCCTTAGA 59.097 55.000 0.00 0.00 0.00 2.10
1769 7701 0.611714 TTTCCGCTCACCCCTTAGAC 59.388 55.000 0.00 0.00 0.00 2.59
1770 7702 1.601419 TTCCGCTCACCCCTTAGACG 61.601 60.000 0.00 0.00 0.00 4.18
1771 7703 2.202756 CGCTCACCCCTTAGACGC 60.203 66.667 0.00 0.00 0.00 5.19
1772 7704 2.978824 GCTCACCCCTTAGACGCA 59.021 61.111 0.00 0.00 0.00 5.24
1773 7705 1.295423 GCTCACCCCTTAGACGCAA 59.705 57.895 0.00 0.00 0.00 4.85
1775 7707 0.741221 CTCACCCCTTAGACGCAAGC 60.741 60.000 0.00 0.00 45.62 4.01
1776 7708 1.192146 TCACCCCTTAGACGCAAGCT 61.192 55.000 0.00 0.00 45.62 3.74
1777 7709 0.321653 CACCCCTTAGACGCAAGCTT 60.322 55.000 0.00 0.00 45.62 3.74
1778 7710 0.321653 ACCCCTTAGACGCAAGCTTG 60.322 55.000 22.44 22.44 45.62 4.01
1779 7711 1.026718 CCCCTTAGACGCAAGCTTGG 61.027 60.000 27.10 18.79 45.62 3.61
1780 7712 0.321653 CCCTTAGACGCAAGCTTGGT 60.322 55.000 27.10 21.68 45.62 3.67
1781 7713 1.079503 CCTTAGACGCAAGCTTGGTC 58.920 55.000 27.25 27.25 45.62 4.02
1782 7714 1.079503 CTTAGACGCAAGCTTGGTCC 58.920 55.000 29.15 15.30 45.62 4.46
1783 7715 0.394938 TTAGACGCAAGCTTGGTCCA 59.605 50.000 29.15 20.61 45.62 4.02
1784 7716 0.613260 TAGACGCAAGCTTGGTCCAT 59.387 50.000 29.15 20.44 45.62 3.41
1785 7717 0.957395 AGACGCAAGCTTGGTCCATG 60.957 55.000 29.15 9.13 45.62 3.66
1786 7718 2.180017 CGCAAGCTTGGTCCATGC 59.820 61.111 27.10 19.66 35.22 4.06
1787 7719 2.628696 CGCAAGCTTGGTCCATGCA 61.629 57.895 27.10 0.00 37.06 3.96
1788 7720 1.895238 GCAAGCTTGGTCCATGCAT 59.105 52.632 27.10 15.61 37.06 3.96
1789 7721 1.105457 GCAAGCTTGGTCCATGCATA 58.895 50.000 27.10 0.00 37.06 3.14
1790 7722 1.202336 GCAAGCTTGGTCCATGCATAC 60.202 52.381 27.10 13.99 37.06 2.39
1791 7723 1.064505 CAAGCTTGGTCCATGCATACG 59.935 52.381 26.67 11.39 37.06 3.06
1792 7724 0.464373 AGCTTGGTCCATGCATACGG 60.464 55.000 26.67 0.00 37.06 4.02
1793 7725 0.463654 GCTTGGTCCATGCATACGGA 60.464 55.000 21.74 0.00 35.13 4.69
1794 7726 1.586422 CTTGGTCCATGCATACGGAG 58.414 55.000 6.02 0.00 29.98 4.63
1795 7727 4.049393 GGTCCATGCATACGGAGC 57.951 61.111 16.73 16.73 42.14 4.70
1796 7728 1.146041 GGTCCATGCATACGGAGCA 59.854 57.895 23.42 1.27 46.75 4.26
1797 7729 0.463654 GGTCCATGCATACGGAGCAA 60.464 55.000 23.42 0.00 46.75 3.91
1798 7730 1.378531 GTCCATGCATACGGAGCAAA 58.621 50.000 6.02 0.00 46.27 3.68
1799 7731 1.742831 GTCCATGCATACGGAGCAAAA 59.257 47.619 6.02 0.00 46.27 2.44
1800 7732 2.358898 GTCCATGCATACGGAGCAAAAT 59.641 45.455 6.02 0.00 46.27 1.82
1801 7733 3.023119 TCCATGCATACGGAGCAAAATT 58.977 40.909 0.00 0.00 46.27 1.82
1802 7734 3.117794 CCATGCATACGGAGCAAAATTG 58.882 45.455 0.00 0.00 46.27 2.32
1803 7735 3.429272 CCATGCATACGGAGCAAAATTGT 60.429 43.478 0.00 0.00 46.27 2.71
1804 7736 3.932545 TGCATACGGAGCAAAATTGTT 57.067 38.095 0.00 0.00 39.39 2.83
1805 7737 3.573598 TGCATACGGAGCAAAATTGTTG 58.426 40.909 0.00 0.00 39.39 3.33
1806 7738 2.923020 GCATACGGAGCAAAATTGTTGG 59.077 45.455 0.00 0.00 0.00 3.77
1807 7739 3.366883 GCATACGGAGCAAAATTGTTGGA 60.367 43.478 0.00 0.00 0.00 3.53
1808 7740 4.677779 GCATACGGAGCAAAATTGTTGGAT 60.678 41.667 0.00 0.00 0.00 3.41
1809 7741 5.410067 CATACGGAGCAAAATTGTTGGATT 58.590 37.500 0.00 0.00 0.00 3.01
1810 7742 4.335400 ACGGAGCAAAATTGTTGGATTT 57.665 36.364 0.00 0.00 0.00 2.17
1811 7743 4.057432 ACGGAGCAAAATTGTTGGATTTG 58.943 39.130 0.00 0.00 37.17 2.32
1812 7744 4.202202 ACGGAGCAAAATTGTTGGATTTGA 60.202 37.500 1.95 0.00 36.41 2.69
1813 7745 4.749099 CGGAGCAAAATTGTTGGATTTGAA 59.251 37.500 1.95 0.00 36.41 2.69
1814 7746 5.107375 CGGAGCAAAATTGTTGGATTTGAAG 60.107 40.000 1.95 0.00 36.41 3.02
1815 7747 5.179929 GGAGCAAAATTGTTGGATTTGAAGG 59.820 40.000 1.95 0.00 36.41 3.46
1816 7748 5.927819 AGCAAAATTGTTGGATTTGAAGGA 58.072 33.333 1.95 0.00 36.41 3.36
1817 7749 5.759763 AGCAAAATTGTTGGATTTGAAGGAC 59.240 36.000 1.95 0.00 36.41 3.85
1818 7750 5.759763 GCAAAATTGTTGGATTTGAAGGACT 59.240 36.000 1.95 0.00 36.41 3.85
1819 7751 6.293027 GCAAAATTGTTGGATTTGAAGGACTG 60.293 38.462 1.95 0.00 36.41 3.51
1820 7752 6.729690 AAATTGTTGGATTTGAAGGACTGA 57.270 33.333 0.00 0.00 0.00 3.41
1821 7753 6.729690 AATTGTTGGATTTGAAGGACTGAA 57.270 33.333 0.00 0.00 0.00 3.02
1822 7754 6.729690 ATTGTTGGATTTGAAGGACTGAAA 57.270 33.333 0.00 0.00 0.00 2.69
1823 7755 5.772825 TGTTGGATTTGAAGGACTGAAAG 57.227 39.130 0.00 0.00 42.29 2.62
1841 7773 2.344500 GCCATGCCAAAGCTTGCA 59.656 55.556 13.24 13.24 41.59 4.08
1847 7779 0.810823 TGCCAAAGCTTGCAGTTTGC 60.811 50.000 7.34 0.00 41.49 3.68
1848 7780 3.441188 TGCCAAAGCTTGCAGTTTGCA 62.441 47.619 7.34 0.00 45.86 4.08
1885 7817 7.755591 ACATTATATTCAGTGCTTGTTCAGTG 58.244 34.615 0.00 0.00 38.44 3.66
1886 7818 4.691860 ATATTCAGTGCTTGTTCAGTGC 57.308 40.909 0.00 0.00 37.33 4.40
1887 7819 1.024271 TTCAGTGCTTGTTCAGTGCC 58.976 50.000 0.00 0.00 37.33 5.01
1888 7820 0.181114 TCAGTGCTTGTTCAGTGCCT 59.819 50.000 0.00 0.00 37.33 4.75
1891 7823 1.417890 AGTGCTTGTTCAGTGCCTAGT 59.582 47.619 0.00 0.00 0.00 2.57
1893 7825 2.737252 GTGCTTGTTCAGTGCCTAGTAC 59.263 50.000 0.00 0.00 0.00 2.73
1894 7826 1.993370 GCTTGTTCAGTGCCTAGTACG 59.007 52.381 0.00 0.00 0.00 3.67
1895 7827 2.609737 GCTTGTTCAGTGCCTAGTACGT 60.610 50.000 0.00 0.00 0.00 3.57
1896 7828 3.366679 GCTTGTTCAGTGCCTAGTACGTA 60.367 47.826 0.00 0.00 0.00 3.57
1897 7829 4.413087 CTTGTTCAGTGCCTAGTACGTAG 58.587 47.826 0.00 0.00 0.00 3.51
1899 7831 2.118313 TCAGTGCCTAGTACGTAGCA 57.882 50.000 0.00 0.00 0.00 3.49
1900 7832 2.651455 TCAGTGCCTAGTACGTAGCAT 58.349 47.619 10.02 0.00 0.00 3.79
1901 7833 3.812262 TCAGTGCCTAGTACGTAGCATA 58.188 45.455 10.02 0.00 0.00 3.14
1902 7834 3.813724 TCAGTGCCTAGTACGTAGCATAG 59.186 47.826 10.02 6.49 0.00 2.23
1904 7836 2.553172 GTGCCTAGTACGTAGCATAGCT 59.447 50.000 10.02 0.00 43.41 3.32
1905 7837 3.750130 GTGCCTAGTACGTAGCATAGCTA 59.250 47.826 10.02 0.00 40.44 3.32
1906 7838 4.395542 GTGCCTAGTACGTAGCATAGCTAT 59.604 45.833 10.02 0.00 43.30 2.97
1909 7841 5.816777 GCCTAGTACGTAGCATAGCTATAGT 59.183 44.000 5.77 8.28 43.30 2.12
1910 7842 6.315891 GCCTAGTACGTAGCATAGCTATAGTT 59.684 42.308 5.77 0.00 43.30 2.24
1911 7843 7.148272 GCCTAGTACGTAGCATAGCTATAGTTT 60.148 40.741 5.77 0.00 43.30 2.66
1912 7844 9.376075 CCTAGTACGTAGCATAGCTATAGTTTA 57.624 37.037 5.77 0.00 43.30 2.01
1916 7848 9.890352 GTACGTAGCATAGCTATAGTTTAAAGT 57.110 33.333 5.77 0.37 43.30 2.66
1918 7850 9.245962 ACGTAGCATAGCTATAGTTTAAAGTTG 57.754 33.333 5.77 0.00 43.30 3.16
1919 7851 9.245962 CGTAGCATAGCTATAGTTTAAAGTTGT 57.754 33.333 5.77 0.00 43.30 3.32
1922 7854 9.838339 AGCATAGCTATAGTTTAAAGTTGTGAT 57.162 29.630 5.77 0.00 36.99 3.06
1926 7858 8.723942 AGCTATAGTTTAAAGTTGTGATCCTG 57.276 34.615 0.00 0.00 0.00 3.86
1927 7859 8.322091 AGCTATAGTTTAAAGTTGTGATCCTGT 58.678 33.333 0.00 0.00 0.00 4.00
1929 7861 9.653287 CTATAGTTTAAAGTTGTGATCCTGTCA 57.347 33.333 0.00 0.00 0.00 3.58
1931 7863 7.206981 AGTTTAAAGTTGTGATCCTGTCATG 57.793 36.000 0.00 0.00 39.48 3.07
1932 7864 6.998074 AGTTTAAAGTTGTGATCCTGTCATGA 59.002 34.615 0.00 0.00 39.48 3.07
1933 7865 7.667219 AGTTTAAAGTTGTGATCCTGTCATGAT 59.333 33.333 0.00 0.00 39.48 2.45
1935 7867 9.513906 TTTAAAGTTGTGATCCTGTCATGATAA 57.486 29.630 0.00 0.00 39.48 1.75
1936 7868 9.685276 TTAAAGTTGTGATCCTGTCATGATAAT 57.315 29.630 0.00 0.00 39.48 1.28
1937 7869 7.563888 AAGTTGTGATCCTGTCATGATAATG 57.436 36.000 0.00 0.00 39.48 1.90
1938 7870 6.656902 AGTTGTGATCCTGTCATGATAATGT 58.343 36.000 0.00 0.00 39.48 2.71
1939 7871 6.765036 AGTTGTGATCCTGTCATGATAATGTC 59.235 38.462 0.00 0.00 39.48 3.06
1940 7872 5.291971 TGTGATCCTGTCATGATAATGTCG 58.708 41.667 0.00 0.00 39.48 4.35
1941 7873 5.068987 TGTGATCCTGTCATGATAATGTCGA 59.931 40.000 0.00 0.00 39.48 4.20
1942 7874 5.632764 GTGATCCTGTCATGATAATGTCGAG 59.367 44.000 0.00 0.00 39.48 4.04
1943 7875 3.982475 TCCTGTCATGATAATGTCGAGC 58.018 45.455 0.00 0.00 0.00 5.03
1944 7876 3.384467 TCCTGTCATGATAATGTCGAGCA 59.616 43.478 0.00 0.00 0.00 4.26
1945 7877 4.122046 CCTGTCATGATAATGTCGAGCAA 58.878 43.478 0.00 0.00 0.00 3.91
1946 7878 4.025396 CCTGTCATGATAATGTCGAGCAAC 60.025 45.833 0.00 0.00 0.00 4.17
1947 7879 4.502962 TGTCATGATAATGTCGAGCAACA 58.497 39.130 0.00 0.00 0.00 3.33
1948 7880 4.934602 TGTCATGATAATGTCGAGCAACAA 59.065 37.500 0.00 0.00 31.81 2.83
1949 7881 5.163864 TGTCATGATAATGTCGAGCAACAAC 60.164 40.000 0.00 0.00 31.81 3.32
1950 7882 4.934602 TCATGATAATGTCGAGCAACAACA 59.065 37.500 0.00 0.00 31.81 3.33
1951 7883 5.411053 TCATGATAATGTCGAGCAACAACAA 59.589 36.000 0.00 0.00 31.81 2.83
1952 7884 5.281693 TGATAATGTCGAGCAACAACAAG 57.718 39.130 0.00 0.00 31.81 3.16
1953 7885 4.754618 TGATAATGTCGAGCAACAACAAGT 59.245 37.500 0.00 0.00 31.81 3.16
1954 7886 5.929415 TGATAATGTCGAGCAACAACAAGTA 59.071 36.000 0.00 0.00 31.81 2.24
1955 7887 4.732285 AATGTCGAGCAACAACAAGTAG 57.268 40.909 0.00 0.00 31.81 2.57
1956 7888 2.479837 TGTCGAGCAACAACAAGTAGG 58.520 47.619 0.00 0.00 0.00 3.18
1957 7889 2.101750 TGTCGAGCAACAACAAGTAGGA 59.898 45.455 0.00 0.00 0.00 2.94
1958 7890 3.244078 TGTCGAGCAACAACAAGTAGGAT 60.244 43.478 0.00 0.00 0.00 3.24
1959 7891 3.368236 GTCGAGCAACAACAAGTAGGATC 59.632 47.826 0.00 0.00 0.00 3.36
1960 7892 2.345641 CGAGCAACAACAAGTAGGATCG 59.654 50.000 0.00 0.00 37.27 3.69
1961 7893 2.673368 GAGCAACAACAAGTAGGATCGG 59.327 50.000 0.00 0.00 0.00 4.18
1962 7894 2.301870 AGCAACAACAAGTAGGATCGGA 59.698 45.455 0.00 0.00 0.00 4.55
1963 7895 3.055094 AGCAACAACAAGTAGGATCGGAT 60.055 43.478 0.00 0.00 0.00 4.18
1964 7896 3.689649 GCAACAACAAGTAGGATCGGATT 59.310 43.478 0.00 0.00 0.00 3.01
1965 7897 4.201822 GCAACAACAAGTAGGATCGGATTC 60.202 45.833 0.00 0.00 0.00 2.52
1966 7898 4.819105 ACAACAAGTAGGATCGGATTCA 57.181 40.909 0.00 0.00 0.00 2.57
1967 7899 5.160607 ACAACAAGTAGGATCGGATTCAA 57.839 39.130 0.00 0.00 0.00 2.69
1968 7900 5.745227 ACAACAAGTAGGATCGGATTCAAT 58.255 37.500 0.00 0.00 0.00 2.57
1969 7901 6.884832 ACAACAAGTAGGATCGGATTCAATA 58.115 36.000 0.00 0.00 0.00 1.90
1970 7902 7.335627 ACAACAAGTAGGATCGGATTCAATAA 58.664 34.615 0.00 0.00 0.00 1.40
1971 7903 7.827236 ACAACAAGTAGGATCGGATTCAATAAA 59.173 33.333 0.00 0.00 0.00 1.40
1972 7904 8.673711 CAACAAGTAGGATCGGATTCAATAAAA 58.326 33.333 0.00 0.00 0.00 1.52
1973 7905 8.209917 ACAAGTAGGATCGGATTCAATAAAAC 57.790 34.615 0.00 0.00 0.00 2.43
1974 7906 7.827236 ACAAGTAGGATCGGATTCAATAAAACA 59.173 33.333 0.00 0.00 0.00 2.83
1975 7907 8.840321 CAAGTAGGATCGGATTCAATAAAACAT 58.160 33.333 0.00 0.00 0.00 2.71
1976 7908 8.608844 AGTAGGATCGGATTCAATAAAACATC 57.391 34.615 0.00 0.00 0.00 3.06
1977 7909 6.545504 AGGATCGGATTCAATAAAACATCG 57.454 37.500 0.00 0.00 0.00 3.84
1978 7910 6.288294 AGGATCGGATTCAATAAAACATCGA 58.712 36.000 0.00 0.00 0.00 3.59
1979 7911 6.936900 AGGATCGGATTCAATAAAACATCGAT 59.063 34.615 0.00 0.00 37.51 3.59
1980 7912 7.445402 AGGATCGGATTCAATAAAACATCGATT 59.555 33.333 0.00 0.00 35.42 3.34
1981 7913 8.717821 GGATCGGATTCAATAAAACATCGATTA 58.282 33.333 0.00 0.00 35.42 1.75
1982 7914 9.746711 GATCGGATTCAATAAAACATCGATTAG 57.253 33.333 0.00 0.00 35.42 1.73
1983 7915 7.572759 TCGGATTCAATAAAACATCGATTAGC 58.427 34.615 0.00 0.00 0.00 3.09
1984 7916 6.797033 CGGATTCAATAAAACATCGATTAGCC 59.203 38.462 0.00 0.00 0.00 3.93
1985 7917 7.084486 GGATTCAATAAAACATCGATTAGCCC 58.916 38.462 0.00 0.00 0.00 5.19
1986 7918 7.040409 GGATTCAATAAAACATCGATTAGCCCT 60.040 37.037 0.00 0.00 0.00 5.19
1987 7919 7.639113 TTCAATAAAACATCGATTAGCCCTT 57.361 32.000 0.00 0.00 0.00 3.95
1988 7920 7.639113 TCAATAAAACATCGATTAGCCCTTT 57.361 32.000 0.00 0.00 0.00 3.11
1989 7921 8.062065 TCAATAAAACATCGATTAGCCCTTTT 57.938 30.769 0.00 0.00 0.00 2.27
1990 7922 8.527810 TCAATAAAACATCGATTAGCCCTTTTT 58.472 29.630 0.00 0.00 0.00 1.94
2009 7941 3.598019 TTTTCTTGCTGGGAATGATGC 57.402 42.857 0.00 0.00 0.00 3.91
2010 7942 2.219080 TTCTTGCTGGGAATGATGCA 57.781 45.000 0.00 0.00 0.00 3.96
2011 7943 2.447408 TCTTGCTGGGAATGATGCAT 57.553 45.000 0.00 0.00 35.27 3.96
2012 7944 2.742348 TCTTGCTGGGAATGATGCATT 58.258 42.857 0.00 0.00 36.72 3.56
2013 7945 3.101437 TCTTGCTGGGAATGATGCATTT 58.899 40.909 0.00 0.00 33.90 2.32
2014 7946 2.971660 TGCTGGGAATGATGCATTTG 57.028 45.000 0.00 0.00 33.90 2.32
2015 7947 1.483004 TGCTGGGAATGATGCATTTGG 59.517 47.619 0.00 0.00 33.90 3.28
2016 7948 1.808891 GCTGGGAATGATGCATTTGGC 60.809 52.381 0.00 0.00 45.13 4.52
2017 7949 1.760613 CTGGGAATGATGCATTTGGCT 59.239 47.619 0.00 0.00 45.15 4.75
2018 7950 1.758280 TGGGAATGATGCATTTGGCTC 59.242 47.619 0.00 0.00 45.15 4.70
2019 7951 1.758280 GGGAATGATGCATTTGGCTCA 59.242 47.619 0.00 0.00 45.15 4.26
2020 7952 2.223971 GGGAATGATGCATTTGGCTCAG 60.224 50.000 0.00 0.00 45.15 3.35
2021 7953 2.470821 GAATGATGCATTTGGCTCAGC 58.529 47.619 0.00 0.00 45.15 4.26
2022 7954 1.480789 ATGATGCATTTGGCTCAGCA 58.519 45.000 0.00 0.00 45.15 4.41
2023 7955 1.258676 TGATGCATTTGGCTCAGCAA 58.741 45.000 0.00 0.00 45.15 3.91
2024 7956 1.828595 TGATGCATTTGGCTCAGCAAT 59.171 42.857 0.00 0.00 45.15 3.56
2056 10275 8.303876 TGAATTTGTATCTAACTTTTTGAGGCC 58.696 33.333 0.00 0.00 0.00 5.19
2073 10292 1.818674 GGCCGTCAATGGACAGAAATT 59.181 47.619 0.13 0.00 44.54 1.82
2100 10399 1.171549 TCTGAAAGCATGCACCGCAA 61.172 50.000 21.98 0.00 43.62 4.85
2137 10437 4.190772 CACCTTGCTGAAACCAAAAATGT 58.809 39.130 0.00 0.00 0.00 2.71
2138 10438 5.355596 CACCTTGCTGAAACCAAAAATGTA 58.644 37.500 0.00 0.00 0.00 2.29
2141 10441 5.106987 CCTTGCTGAAACCAAAAATGTATGC 60.107 40.000 0.00 0.00 0.00 3.14
2142 10442 3.986572 TGCTGAAACCAAAAATGTATGCG 59.013 39.130 0.00 0.00 0.00 4.73
2144 10444 4.804108 CTGAAACCAAAAATGTATGCGGA 58.196 39.130 0.00 0.00 0.00 5.54
2146 10446 5.226396 TGAAACCAAAAATGTATGCGGAAG 58.774 37.500 0.00 0.00 0.00 3.46
2147 10447 5.010112 TGAAACCAAAAATGTATGCGGAAGA 59.990 36.000 0.00 0.00 0.00 2.87
2148 10448 4.701956 ACCAAAAATGTATGCGGAAGAG 57.298 40.909 0.00 0.00 0.00 2.85
2158 10458 0.528017 TGCGGAAGAGCAGAGTGTAG 59.472 55.000 0.00 0.00 42.92 2.74
2160 10460 1.468395 GCGGAAGAGCAGAGTGTAGAC 60.468 57.143 0.00 0.00 37.05 2.59
2162 10462 2.452505 GGAAGAGCAGAGTGTAGACCT 58.547 52.381 0.00 0.00 0.00 3.85
2165 10465 3.380471 AGAGCAGAGTGTAGACCTGAT 57.620 47.619 11.15 5.99 0.00 2.90
2167 10467 2.100584 GAGCAGAGTGTAGACCTGATGG 59.899 54.545 11.15 0.00 39.83 3.51
2177 10477 1.296715 ACCTGATGGTCCGTGAAGC 59.703 57.895 0.00 0.00 44.78 3.86
2178 10478 1.450312 CCTGATGGTCCGTGAAGCC 60.450 63.158 0.00 0.00 0.00 4.35
2179 10479 1.450312 CTGATGGTCCGTGAAGCCC 60.450 63.158 0.00 0.00 0.00 5.19
2180 10480 1.903877 CTGATGGTCCGTGAAGCCCT 61.904 60.000 0.00 0.00 0.00 5.19
2181 10481 1.450312 GATGGTCCGTGAAGCCCTG 60.450 63.158 0.00 0.00 0.00 4.45
2182 10482 2.185310 GATGGTCCGTGAAGCCCTGT 62.185 60.000 0.00 0.00 0.00 4.00
2183 10483 2.047179 GGTCCGTGAAGCCCTGTC 60.047 66.667 0.00 0.00 0.00 3.51
2184 10484 2.432628 GTCCGTGAAGCCCTGTCG 60.433 66.667 0.00 0.00 0.00 4.35
2221 10521 5.836358 ACCTTTTAGCTCCCATTTAACACAA 59.164 36.000 0.00 0.00 0.00 3.33
2227 10527 4.055360 GCTCCCATTTAACACAACAAACC 58.945 43.478 0.00 0.00 0.00 3.27
2245 10545 6.631016 ACAAACCTTGACTTCCTTTTTCTTC 58.369 36.000 0.00 0.00 0.00 2.87
2249 10549 6.368805 ACCTTGACTTCCTTTTTCTTCTGAT 58.631 36.000 0.00 0.00 0.00 2.90
2252 10552 7.013655 CCTTGACTTCCTTTTTCTTCTGATTGA 59.986 37.037 0.00 0.00 0.00 2.57
2261 10561 3.986996 TCTTCTGATTGAGGTGATGCA 57.013 42.857 0.00 0.00 0.00 3.96
2263 10563 5.619132 TCTTCTGATTGAGGTGATGCATA 57.381 39.130 0.00 0.00 0.00 3.14
2264 10564 6.183810 TCTTCTGATTGAGGTGATGCATAT 57.816 37.500 0.00 0.00 0.00 1.78
2265 10565 6.228995 TCTTCTGATTGAGGTGATGCATATC 58.771 40.000 0.00 0.00 0.00 1.63
2273 10573 4.571984 TGAGGTGATGCATATCGAGTTTTG 59.428 41.667 0.00 0.00 36.04 2.44
2283 10583 7.295201 TGCATATCGAGTTTTGAACTGTAAAC 58.705 34.615 0.00 0.00 43.03 2.01
2284 10584 7.041712 TGCATATCGAGTTTTGAACTGTAAACA 60.042 33.333 7.25 0.00 43.03 2.83
2290 10590 9.047371 TCGAGTTTTGAACTGTAAACATTCATA 57.953 29.630 7.25 3.40 43.03 2.15
2302 10602 7.356540 TGTAAACATTCATAAAGTTGACACGG 58.643 34.615 0.00 0.00 32.97 4.94
2310 10610 2.702592 AAGTTGACACGGAAGGTTCA 57.297 45.000 0.00 0.00 0.00 3.18
2317 10617 2.298163 GACACGGAAGGTTCAGGTTAGA 59.702 50.000 0.00 0.00 0.00 2.10
2319 10619 3.135167 ACACGGAAGGTTCAGGTTAGAAA 59.865 43.478 0.00 0.00 0.00 2.52
2321 10621 2.735134 CGGAAGGTTCAGGTTAGAAACG 59.265 50.000 0.00 0.00 40.14 3.60
2393 10693 5.989477 AGAACATCTCCGAATGTTGGAATA 58.011 37.500 13.24 0.00 46.99 1.75
2416 10716 4.556942 TGAAAGCATTGAGGCATAATCG 57.443 40.909 0.00 0.00 35.83 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.979270 CAAGTCTAAACAAATTATCAGCTACTG 57.021 33.333 0.00 0.00 0.00 2.74
15 16 7.094508 TCAAGCACATTTTCAAGTCTAAACA 57.905 32.000 0.00 0.00 0.00 2.83
18 19 7.362662 GTCATCAAGCACATTTTCAAGTCTAA 58.637 34.615 0.00 0.00 0.00 2.10
19 20 6.072508 GGTCATCAAGCACATTTTCAAGTCTA 60.073 38.462 0.00 0.00 0.00 2.59
22 23 4.341806 TGGTCATCAAGCACATTTTCAAGT 59.658 37.500 0.00 0.00 0.00 3.16
23 24 4.873817 TGGTCATCAAGCACATTTTCAAG 58.126 39.130 0.00 0.00 0.00 3.02
24 25 4.933505 TGGTCATCAAGCACATTTTCAA 57.066 36.364 0.00 0.00 0.00 2.69
25 26 4.341806 AGTTGGTCATCAAGCACATTTTCA 59.658 37.500 0.00 0.00 35.80 2.69
33 34 6.888105 TCAATAGATAGTTGGTCATCAAGCA 58.112 36.000 0.00 0.00 35.80 3.91
54 55 8.442632 CTGCTCATCAGGAAAACTATTATCAA 57.557 34.615 0.00 0.00 39.15 2.57
95 96 8.494433 AGCATACCAAGGAATACTATGAGAAAA 58.506 33.333 0.00 0.00 0.00 2.29
97 98 7.618019 AGCATACCAAGGAATACTATGAGAA 57.382 36.000 0.00 0.00 0.00 2.87
151 152 8.658619 TGTTGATAGGTAAAGTTAGGTGGTAAA 58.341 33.333 0.00 0.00 0.00 2.01
152 153 8.204903 TGTTGATAGGTAAAGTTAGGTGGTAA 57.795 34.615 0.00 0.00 0.00 2.85
157 158 9.856162 TTCTTTTGTTGATAGGTAAAGTTAGGT 57.144 29.630 0.00 0.00 0.00 3.08
200 201 9.010029 GGTCATCTCCAAAAGTAATGTCTTAAA 57.990 33.333 0.00 0.00 0.00 1.52
201 202 7.610305 GGGTCATCTCCAAAAGTAATGTCTTAA 59.390 37.037 0.00 0.00 0.00 1.85
203 204 5.946377 GGGTCATCTCCAAAAGTAATGTCTT 59.054 40.000 0.00 0.00 0.00 3.01
204 205 5.014123 TGGGTCATCTCCAAAAGTAATGTCT 59.986 40.000 0.00 0.00 0.00 3.41
207 208 5.009631 TGTGGGTCATCTCCAAAAGTAATG 58.990 41.667 0.00 0.00 35.86 1.90
208 209 5.010282 GTGTGGGTCATCTCCAAAAGTAAT 58.990 41.667 0.00 0.00 35.86 1.89
209 210 4.141367 TGTGTGGGTCATCTCCAAAAGTAA 60.141 41.667 0.00 0.00 35.86 2.24
210 211 3.392947 TGTGTGGGTCATCTCCAAAAGTA 59.607 43.478 0.00 0.00 35.86 2.24
211 212 2.174639 TGTGTGGGTCATCTCCAAAAGT 59.825 45.455 0.00 0.00 35.86 2.66
214 215 2.555006 CCATGTGTGGGTCATCTCCAAA 60.555 50.000 0.00 0.00 42.11 3.28
215 216 1.004628 CCATGTGTGGGTCATCTCCAA 59.995 52.381 0.00 0.00 42.11 3.53
217 218 0.911769 TCCATGTGTGGGTCATCTCC 59.088 55.000 0.00 0.00 46.06 3.71
220 221 4.422073 TTCTATCCATGTGTGGGTCATC 57.578 45.455 0.00 0.00 46.06 2.92
224 225 3.308402 CCTGTTTCTATCCATGTGTGGGT 60.308 47.826 0.00 0.00 46.06 4.51
228 229 2.242196 CCCCCTGTTTCTATCCATGTGT 59.758 50.000 0.00 0.00 0.00 3.72
230 231 2.509964 GTCCCCCTGTTTCTATCCATGT 59.490 50.000 0.00 0.00 0.00 3.21
232 233 1.768870 CGTCCCCCTGTTTCTATCCAT 59.231 52.381 0.00 0.00 0.00 3.41
233 234 1.200519 CGTCCCCCTGTTTCTATCCA 58.799 55.000 0.00 0.00 0.00 3.41
238 239 1.831652 CTGCTCGTCCCCCTGTTTCT 61.832 60.000 0.00 0.00 0.00 2.52
239 240 1.376037 CTGCTCGTCCCCCTGTTTC 60.376 63.158 0.00 0.00 0.00 2.78
240 241 2.750350 CTGCTCGTCCCCCTGTTT 59.250 61.111 0.00 0.00 0.00 2.83
241 242 3.322466 CCTGCTCGTCCCCCTGTT 61.322 66.667 0.00 0.00 0.00 3.16
243 244 2.765807 ATCCTGCTCGTCCCCCTG 60.766 66.667 0.00 0.00 0.00 4.45
249 250 0.029567 CCGTAGTGATCCTGCTCGTC 59.970 60.000 0.00 0.00 0.00 4.20
258 259 3.109619 CGAGAAAGAAGCCGTAGTGATC 58.890 50.000 0.00 0.00 0.00 2.92
259 260 2.753452 TCGAGAAAGAAGCCGTAGTGAT 59.247 45.455 0.00 0.00 0.00 3.06
260 261 2.156917 TCGAGAAAGAAGCCGTAGTGA 58.843 47.619 0.00 0.00 0.00 3.41
263 264 1.202313 CCCTCGAGAAAGAAGCCGTAG 60.202 57.143 15.71 0.00 0.00 3.51
264 265 0.815734 CCCTCGAGAAAGAAGCCGTA 59.184 55.000 15.71 0.00 0.00 4.02
265 266 1.592223 CCCTCGAGAAAGAAGCCGT 59.408 57.895 15.71 0.00 0.00 5.68
266 267 1.811679 GCCCTCGAGAAAGAAGCCG 60.812 63.158 15.71 0.00 0.00 5.52
270 271 1.590147 GACGGCCCTCGAGAAAGAA 59.410 57.895 15.71 0.00 42.43 2.52
275 276 3.209812 CATCGACGGCCCTCGAGA 61.210 66.667 26.87 9.95 45.50 4.04
285 286 3.406728 TTTAGTGAGAGCTCATCGACG 57.593 47.619 17.77 0.00 42.18 5.12
286 287 4.109050 CCTTTTAGTGAGAGCTCATCGAC 58.891 47.826 17.77 6.42 42.18 4.20
287 288 3.764434 ACCTTTTAGTGAGAGCTCATCGA 59.236 43.478 17.77 0.00 42.18 3.59
298 299 6.316890 GTCACCTTTTACACACCTTTTAGTGA 59.683 38.462 0.00 0.00 40.34 3.41
303 304 5.986501 TTGTCACCTTTTACACACCTTTT 57.013 34.783 0.00 0.00 0.00 2.27
304 305 6.337356 CAATTGTCACCTTTTACACACCTTT 58.663 36.000 0.00 0.00 0.00 3.11
305 306 5.681179 GCAATTGTCACCTTTTACACACCTT 60.681 40.000 7.40 0.00 0.00 3.50
306 307 4.202111 GCAATTGTCACCTTTTACACACCT 60.202 41.667 7.40 0.00 0.00 4.00
308 309 4.048504 GGCAATTGTCACCTTTTACACAC 58.951 43.478 4.85 0.00 0.00 3.82
309 310 3.243234 CGGCAATTGTCACCTTTTACACA 60.243 43.478 11.22 0.00 0.00 3.72
310 311 3.003897 TCGGCAATTGTCACCTTTTACAC 59.996 43.478 11.22 0.00 0.00 2.90
317 4079 0.321653 GGACTCGGCAATTGTCACCT 60.322 55.000 11.22 0.00 32.84 4.00
347 4109 5.069781 ACTTCTTTGCTCAGTACAACTCTCT 59.930 40.000 0.00 0.00 0.00 3.10
391 4153 4.080863 AGGACACTCCATTGAATCACTACC 60.081 45.833 0.00 0.00 39.61 3.18
493 4257 1.009078 TGACGCTAACATGCAGATGC 58.991 50.000 0.00 0.00 42.50 3.91
494 4258 2.097056 CGATGACGCTAACATGCAGATG 60.097 50.000 0.00 0.00 35.49 2.90
495 4259 2.130395 CGATGACGCTAACATGCAGAT 58.870 47.619 0.00 0.00 0.00 2.90
496 4260 1.559831 CGATGACGCTAACATGCAGA 58.440 50.000 0.00 0.00 0.00 4.26
530 4294 3.862267 TGCAAAAACATTGTTTGACTCCG 59.138 39.130 15.17 2.90 38.05 4.63
531 4295 4.869861 ACTGCAAAAACATTGTTTGACTCC 59.130 37.500 15.17 4.23 38.05 3.85
533 4297 6.393990 TGTACTGCAAAAACATTGTTTGACT 58.606 32.000 15.17 0.00 38.05 3.41
549 4313 1.202348 CACCGTCTCTCATGTACTGCA 59.798 52.381 0.00 0.00 0.00 4.41
551 4315 3.763902 CTTCACCGTCTCTCATGTACTG 58.236 50.000 0.00 0.00 0.00 2.74
553 4317 2.531206 GCTTCACCGTCTCTCATGTAC 58.469 52.381 0.00 0.00 0.00 2.90
554 4318 1.132453 CGCTTCACCGTCTCTCATGTA 59.868 52.381 0.00 0.00 0.00 2.29
581 4345 4.282957 TGGTGCTCAAGCCAAATTTATTCA 59.717 37.500 0.00 0.00 41.18 2.57
634 6493 4.113354 GGAGTGGTTAGTTAAGCTCATCG 58.887 47.826 0.00 0.00 34.93 3.84
651 6510 3.087031 TCCCGTGAGTTAGTTAGGAGTG 58.913 50.000 0.00 0.00 0.00 3.51
692 6551 4.189639 AGTGGATCGGAGAAGTTTGTAC 57.810 45.455 0.00 0.00 43.58 2.90
693 6552 4.884668 AAGTGGATCGGAGAAGTTTGTA 57.115 40.909 0.00 0.00 43.58 2.41
694 6553 3.771577 AAGTGGATCGGAGAAGTTTGT 57.228 42.857 0.00 0.00 43.58 2.83
725 6584 5.029650 TCAAAATGCTGACGTTGTGATAC 57.970 39.130 0.00 0.00 34.67 2.24
757 6616 2.437281 TCCTGGGAAGATTCTGATCTGC 59.563 50.000 0.00 0.00 41.78 4.26
891 6756 1.067495 GCTCTGCACGTCTAACTCCTT 60.067 52.381 0.00 0.00 0.00 3.36
943 6814 0.716108 CACGAATCGAGTCAGTTGCC 59.284 55.000 10.55 0.00 0.00 4.52
958 6829 2.230266 TGATCAAACGATCTCCACACGA 59.770 45.455 0.00 0.00 40.10 4.35
974 6845 6.713762 AATCTTGTGAAACCAAGTTGATCA 57.286 33.333 3.87 3.29 42.01 2.92
986 6861 2.668001 CGCGCCATCAAATCTTGTGAAA 60.668 45.455 0.00 0.00 0.00 2.69
989 6864 0.168788 ACGCGCCATCAAATCTTGTG 59.831 50.000 5.73 0.00 0.00 3.33
1077 6952 2.061578 TTCCGATGCCCCGCTCTTA 61.062 57.895 0.00 0.00 0.00 2.10
1121 7026 1.005630 GCACTGCTCCAACTCTCGT 60.006 57.895 0.00 0.00 0.00 4.18
1122 7027 1.739562 GGCACTGCTCCAACTCTCG 60.740 63.158 0.00 0.00 0.00 4.04
1185 7096 2.192979 GCATCATTCCCGCTCCCA 59.807 61.111 0.00 0.00 0.00 4.37
1203 7116 2.195683 CCACCACCAGCACCAACT 59.804 61.111 0.00 0.00 0.00 3.16
1204 7117 3.605664 GCCACCACCAGCACCAAC 61.606 66.667 0.00 0.00 0.00 3.77
1290 7210 3.109547 GCCATCACGTTCACGCGA 61.110 61.111 15.93 0.00 44.43 5.87
1398 7318 1.947678 GCTTAGAGCTGCTTGAAGCCA 60.948 52.381 26.49 1.97 44.68 4.75
1415 7335 1.168714 GCAACGGGAGAAATGAGCTT 58.831 50.000 0.00 0.00 0.00 3.74
1464 7384 2.486796 GAGGCAATGCAACCTCCTC 58.513 57.895 18.47 14.48 45.71 3.71
1479 7399 9.952188 AGTAAGAAAAAGAAAAGAAAATCGAGG 57.048 29.630 0.00 0.00 0.00 4.63
1523 7444 3.192103 AAAAGCCTCGGGAAGCGGT 62.192 57.895 0.00 0.00 0.00 5.68
1527 7448 1.340017 TGGATCAAAAGCCTCGGGAAG 60.340 52.381 0.00 0.00 0.00 3.46
1530 7451 1.027357 CATGGATCAAAAGCCTCGGG 58.973 55.000 0.00 0.00 0.00 5.14
1541 7463 5.060506 ACGTTTACAACTTGTCATGGATCA 58.939 37.500 0.00 0.00 0.00 2.92
1547 7469 4.699637 TGAGGACGTTTACAACTTGTCAT 58.300 39.130 0.00 0.00 0.00 3.06
1549 7471 4.552184 GCTTGAGGACGTTTACAACTTGTC 60.552 45.833 0.00 0.00 0.00 3.18
1550 7472 3.311596 GCTTGAGGACGTTTACAACTTGT 59.688 43.478 0.00 0.00 0.00 3.16
1551 7473 3.303791 GGCTTGAGGACGTTTACAACTTG 60.304 47.826 0.00 0.00 0.00 3.16
1562 7494 4.452733 GACGGGGGCTTGAGGACG 62.453 72.222 0.00 0.00 0.00 4.79
1564 7496 2.203938 AAGACGGGGGCTTGAGGA 60.204 61.111 0.00 0.00 0.00 3.71
1576 7508 5.696724 AGGAAATCTCTTTGTACACAAGACG 59.303 40.000 13.22 10.75 37.15 4.18
1577 7509 7.497925 AAGGAAATCTCTTTGTACACAAGAC 57.502 36.000 13.22 6.60 37.15 3.01
1587 7519 9.415544 CTGGAACAAATAAAGGAAATCTCTTTG 57.584 33.333 0.00 0.00 38.70 2.77
1593 7525 5.949735 TCGCTGGAACAAATAAAGGAAATC 58.050 37.500 0.00 0.00 38.70 2.17
1599 7531 5.708948 TCCATTTCGCTGGAACAAATAAAG 58.291 37.500 0.00 0.00 42.36 1.85
1615 7547 5.801350 TGATCGTGAGACATTTCCATTTC 57.199 39.130 0.00 0.00 46.97 2.17
1632 7564 8.370493 ACAAATACCAGAACATCTTATGATCG 57.630 34.615 0.00 0.00 37.18 3.69
1656 7588 9.668497 ATCCCAAGTTTCATAGACTAAAAGTAC 57.332 33.333 0.00 0.00 0.00 2.73
1699 7631 3.535561 ACGGAAGGCATAGTCAATCTTG 58.464 45.455 0.00 0.00 0.00 3.02
1705 7637 2.301870 AGAACAACGGAAGGCATAGTCA 59.698 45.455 0.00 0.00 0.00 3.41
1706 7638 2.673368 CAGAACAACGGAAGGCATAGTC 59.327 50.000 0.00 0.00 0.00 2.59
1707 7639 2.038557 ACAGAACAACGGAAGGCATAGT 59.961 45.455 0.00 0.00 0.00 2.12
1708 7640 2.416547 CACAGAACAACGGAAGGCATAG 59.583 50.000 0.00 0.00 0.00 2.23
1709 7641 2.037902 TCACAGAACAACGGAAGGCATA 59.962 45.455 0.00 0.00 0.00 3.14
1710 7642 1.202758 TCACAGAACAACGGAAGGCAT 60.203 47.619 0.00 0.00 0.00 4.40
1714 7646 0.232303 GCGTCACAGAACAACGGAAG 59.768 55.000 0.00 0.00 36.92 3.46
1717 7649 0.597637 AGAGCGTCACAGAACAACGG 60.598 55.000 0.00 0.00 36.92 4.44
1719 7651 1.852942 TGAGAGCGTCACAGAACAAC 58.147 50.000 0.00 0.00 0.00 3.32
1728 7660 1.869690 CGTCTGAGTGAGAGCGTCA 59.130 57.895 0.00 0.00 0.00 4.35
1729 7661 1.513160 GCGTCTGAGTGAGAGCGTC 60.513 63.158 4.28 0.00 31.66 5.19
1730 7662 2.261586 TGCGTCTGAGTGAGAGCGT 61.262 57.895 4.28 0.00 31.22 5.07
1731 7663 1.799519 GTGCGTCTGAGTGAGAGCG 60.800 63.158 0.00 0.00 31.22 5.03
1732 7664 0.038709 AAGTGCGTCTGAGTGAGAGC 60.039 55.000 0.00 0.00 0.00 4.09
1733 7665 2.323959 GAAAGTGCGTCTGAGTGAGAG 58.676 52.381 0.00 0.00 0.00 3.20
1734 7666 1.000163 GGAAAGTGCGTCTGAGTGAGA 60.000 52.381 0.00 0.00 0.00 3.27
1735 7667 1.423395 GGAAAGTGCGTCTGAGTGAG 58.577 55.000 0.00 0.00 0.00 3.51
1736 7668 0.318699 CGGAAAGTGCGTCTGAGTGA 60.319 55.000 0.00 0.00 0.00 3.41
1737 7669 1.891060 GCGGAAAGTGCGTCTGAGTG 61.891 60.000 0.00 0.00 32.35 3.51
1738 7670 1.664965 GCGGAAAGTGCGTCTGAGT 60.665 57.895 0.00 0.00 32.35 3.41
1739 7671 1.347817 GAGCGGAAAGTGCGTCTGAG 61.348 60.000 0.00 0.00 37.44 3.35
1740 7672 1.372997 GAGCGGAAAGTGCGTCTGA 60.373 57.895 0.00 0.00 37.44 3.27
1741 7673 1.664649 TGAGCGGAAAGTGCGTCTG 60.665 57.895 0.00 0.00 37.44 3.51
1742 7674 1.664965 GTGAGCGGAAAGTGCGTCT 60.665 57.895 0.00 0.00 37.44 4.18
1743 7675 2.668280 GGTGAGCGGAAAGTGCGTC 61.668 63.158 0.00 0.00 37.44 5.19
1744 7676 2.665185 GGTGAGCGGAAAGTGCGT 60.665 61.111 0.00 0.00 37.44 5.24
1745 7677 3.423154 GGGTGAGCGGAAAGTGCG 61.423 66.667 0.00 0.00 37.44 5.34
1746 7678 3.056328 GGGGTGAGCGGAAAGTGC 61.056 66.667 0.00 0.00 0.00 4.40
1747 7679 0.323629 TAAGGGGTGAGCGGAAAGTG 59.676 55.000 0.00 0.00 0.00 3.16
1748 7680 0.613777 CTAAGGGGTGAGCGGAAAGT 59.386 55.000 0.00 0.00 0.00 2.66
1749 7681 0.902531 TCTAAGGGGTGAGCGGAAAG 59.097 55.000 0.00 0.00 0.00 2.62
1750 7682 0.611714 GTCTAAGGGGTGAGCGGAAA 59.388 55.000 0.00 0.00 0.00 3.13
1751 7683 1.601419 CGTCTAAGGGGTGAGCGGAA 61.601 60.000 0.00 0.00 0.00 4.30
1752 7684 2.050350 CGTCTAAGGGGTGAGCGGA 61.050 63.158 0.00 0.00 0.00 5.54
1753 7685 2.494918 CGTCTAAGGGGTGAGCGG 59.505 66.667 0.00 0.00 0.00 5.52
1754 7686 2.202756 GCGTCTAAGGGGTGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
1755 7687 0.741221 CTTGCGTCTAAGGGGTGAGC 60.741 60.000 0.00 0.00 0.00 4.26
1756 7688 0.741221 GCTTGCGTCTAAGGGGTGAG 60.741 60.000 0.00 0.00 0.00 3.51
1757 7689 1.192146 AGCTTGCGTCTAAGGGGTGA 61.192 55.000 0.00 0.00 0.00 4.02
1758 7690 0.321653 AAGCTTGCGTCTAAGGGGTG 60.322 55.000 0.00 0.00 0.00 4.61
1759 7691 0.321653 CAAGCTTGCGTCTAAGGGGT 60.322 55.000 14.65 0.00 0.00 4.95
1760 7692 1.026718 CCAAGCTTGCGTCTAAGGGG 61.027 60.000 21.43 0.00 0.00 4.79
1761 7693 0.321653 ACCAAGCTTGCGTCTAAGGG 60.322 55.000 21.43 6.53 0.00 3.95
1762 7694 1.079503 GACCAAGCTTGCGTCTAAGG 58.920 55.000 27.24 14.50 0.00 2.69
1763 7695 1.079503 GGACCAAGCTTGCGTCTAAG 58.920 55.000 30.26 17.05 32.53 2.18
1764 7696 0.394938 TGGACCAAGCTTGCGTCTAA 59.605 50.000 30.26 22.10 32.53 2.10
1765 7697 0.613260 ATGGACCAAGCTTGCGTCTA 59.387 50.000 30.26 27.76 32.53 2.59
1766 7698 0.957395 CATGGACCAAGCTTGCGTCT 60.957 55.000 30.26 18.55 32.53 4.18
1767 7699 1.503542 CATGGACCAAGCTTGCGTC 59.496 57.895 26.88 26.88 0.00 5.19
1768 7700 2.629656 GCATGGACCAAGCTTGCGT 61.630 57.895 21.43 19.00 0.00 5.24
1769 7701 1.940883 ATGCATGGACCAAGCTTGCG 61.941 55.000 21.43 15.97 36.11 4.85
1770 7702 1.105457 TATGCATGGACCAAGCTTGC 58.895 50.000 21.43 15.86 0.00 4.01
1771 7703 1.064505 CGTATGCATGGACCAAGCTTG 59.935 52.381 21.49 19.93 0.00 4.01
1772 7704 1.382522 CGTATGCATGGACCAAGCTT 58.617 50.000 21.49 17.47 0.00 3.74
1773 7705 0.464373 CCGTATGCATGGACCAAGCT 60.464 55.000 21.49 10.33 31.77 3.74
1774 7706 0.463654 TCCGTATGCATGGACCAAGC 60.464 55.000 14.82 14.82 34.74 4.01
1775 7707 1.586422 CTCCGTATGCATGGACCAAG 58.414 55.000 10.16 0.00 34.74 3.61
1776 7708 0.463654 GCTCCGTATGCATGGACCAA 60.464 55.000 10.16 0.00 34.74 3.67
1777 7709 1.146041 GCTCCGTATGCATGGACCA 59.854 57.895 10.16 0.00 34.74 4.02
1778 7710 0.463654 TTGCTCCGTATGCATGGACC 60.464 55.000 10.16 0.25 40.34 4.46
1779 7711 1.378531 TTTGCTCCGTATGCATGGAC 58.621 50.000 10.16 0.00 40.34 4.02
1780 7712 2.121291 TTTTGCTCCGTATGCATGGA 57.879 45.000 10.16 7.57 40.34 3.41
1781 7713 3.117794 CAATTTTGCTCCGTATGCATGG 58.882 45.455 10.16 2.60 40.34 3.66
1782 7714 3.772932 ACAATTTTGCTCCGTATGCATG 58.227 40.909 10.16 0.00 40.34 4.06
1783 7715 4.175516 CAACAATTTTGCTCCGTATGCAT 58.824 39.130 3.79 3.79 40.34 3.96
1784 7716 3.573598 CAACAATTTTGCTCCGTATGCA 58.426 40.909 0.00 0.00 38.80 3.96
1785 7717 2.923020 CCAACAATTTTGCTCCGTATGC 59.077 45.455 0.00 0.00 0.00 3.14
1786 7718 4.433186 TCCAACAATTTTGCTCCGTATG 57.567 40.909 0.00 0.00 0.00 2.39
1787 7719 5.659440 AATCCAACAATTTTGCTCCGTAT 57.341 34.783 0.00 0.00 0.00 3.06
1788 7720 5.010112 TCAAATCCAACAATTTTGCTCCGTA 59.990 36.000 0.00 0.00 31.88 4.02
1789 7721 4.057432 CAAATCCAACAATTTTGCTCCGT 58.943 39.130 0.00 0.00 0.00 4.69
1790 7722 4.305769 TCAAATCCAACAATTTTGCTCCG 58.694 39.130 0.00 0.00 31.88 4.63
1791 7723 5.179929 CCTTCAAATCCAACAATTTTGCTCC 59.820 40.000 0.00 0.00 31.88 4.70
1792 7724 5.990996 TCCTTCAAATCCAACAATTTTGCTC 59.009 36.000 0.00 0.00 31.88 4.26
1793 7725 5.759763 GTCCTTCAAATCCAACAATTTTGCT 59.240 36.000 0.00 0.00 31.88 3.91
1794 7726 5.759763 AGTCCTTCAAATCCAACAATTTTGC 59.240 36.000 0.00 0.00 31.88 3.68
1795 7727 6.985645 TCAGTCCTTCAAATCCAACAATTTTG 59.014 34.615 0.00 0.00 0.00 2.44
1796 7728 7.123355 TCAGTCCTTCAAATCCAACAATTTT 57.877 32.000 0.00 0.00 0.00 1.82
1797 7729 6.729690 TCAGTCCTTCAAATCCAACAATTT 57.270 33.333 0.00 0.00 0.00 1.82
1798 7730 6.729690 TTCAGTCCTTCAAATCCAACAATT 57.270 33.333 0.00 0.00 0.00 2.32
1799 7731 6.239402 CCTTTCAGTCCTTCAAATCCAACAAT 60.239 38.462 0.00 0.00 0.00 2.71
1800 7732 5.068987 CCTTTCAGTCCTTCAAATCCAACAA 59.931 40.000 0.00 0.00 0.00 2.83
1801 7733 4.584325 CCTTTCAGTCCTTCAAATCCAACA 59.416 41.667 0.00 0.00 0.00 3.33
1802 7734 4.559502 GCCTTTCAGTCCTTCAAATCCAAC 60.560 45.833 0.00 0.00 0.00 3.77
1803 7735 3.573967 GCCTTTCAGTCCTTCAAATCCAA 59.426 43.478 0.00 0.00 0.00 3.53
1804 7736 3.157087 GCCTTTCAGTCCTTCAAATCCA 58.843 45.455 0.00 0.00 0.00 3.41
1805 7737 2.493675 GGCCTTTCAGTCCTTCAAATCC 59.506 50.000 0.00 0.00 0.00 3.01
1806 7738 3.157087 TGGCCTTTCAGTCCTTCAAATC 58.843 45.455 3.32 0.00 0.00 2.17
1807 7739 3.243359 TGGCCTTTCAGTCCTTCAAAT 57.757 42.857 3.32 0.00 0.00 2.32
1808 7740 2.746279 TGGCCTTTCAGTCCTTCAAA 57.254 45.000 3.32 0.00 0.00 2.69
1809 7741 2.517959 CATGGCCTTTCAGTCCTTCAA 58.482 47.619 3.32 0.00 0.00 2.69
1810 7742 1.887956 GCATGGCCTTTCAGTCCTTCA 60.888 52.381 3.32 0.00 0.00 3.02
1811 7743 0.813821 GCATGGCCTTTCAGTCCTTC 59.186 55.000 3.32 0.00 0.00 3.46
1812 7744 0.613012 GGCATGGCCTTTCAGTCCTT 60.613 55.000 8.35 0.00 46.69 3.36
1813 7745 1.000396 GGCATGGCCTTTCAGTCCT 60.000 57.895 8.35 0.00 46.69 3.85
1814 7746 3.608432 GGCATGGCCTTTCAGTCC 58.392 61.111 8.35 0.00 46.69 3.85
1858 7790 9.618890 ACTGAACAAGCACTGAATATAATGTAT 57.381 29.630 0.00 0.00 0.00 2.29
1860 7792 7.627088 GCACTGAACAAGCACTGAATATAATGT 60.627 37.037 0.00 0.00 0.00 2.71
1864 7796 4.635765 GGCACTGAACAAGCACTGAATATA 59.364 41.667 0.00 0.00 0.00 0.86
1865 7797 3.441572 GGCACTGAACAAGCACTGAATAT 59.558 43.478 0.00 0.00 0.00 1.28
1866 7798 2.813754 GGCACTGAACAAGCACTGAATA 59.186 45.455 0.00 0.00 0.00 1.75
1867 7799 1.610522 GGCACTGAACAAGCACTGAAT 59.389 47.619 0.00 0.00 0.00 2.57
1869 7801 0.181114 AGGCACTGAACAAGCACTGA 59.819 50.000 0.00 0.00 37.18 3.41
1870 7802 1.802960 CTAGGCACTGAACAAGCACTG 59.197 52.381 0.00 0.00 41.52 3.66
1871 7803 1.417890 ACTAGGCACTGAACAAGCACT 59.582 47.619 0.00 0.00 41.52 4.40
1872 7804 1.884235 ACTAGGCACTGAACAAGCAC 58.116 50.000 0.00 0.00 41.52 4.40
1873 7805 2.609491 CGTACTAGGCACTGAACAAGCA 60.609 50.000 0.00 0.00 41.52 3.91
1876 7808 3.366679 GCTACGTACTAGGCACTGAACAA 60.367 47.826 0.00 0.00 41.52 2.83
1877 7809 2.163010 GCTACGTACTAGGCACTGAACA 59.837 50.000 0.00 0.00 41.52 3.18
1878 7810 2.163010 TGCTACGTACTAGGCACTGAAC 59.837 50.000 3.34 0.00 41.52 3.18
1879 7811 2.439409 TGCTACGTACTAGGCACTGAA 58.561 47.619 3.34 0.00 41.52 3.02
1880 7812 2.118313 TGCTACGTACTAGGCACTGA 57.882 50.000 3.34 0.00 41.52 3.41
1881 7813 3.609644 GCTATGCTACGTACTAGGCACTG 60.610 52.174 9.13 6.76 41.52 3.66
1882 7814 2.553172 GCTATGCTACGTACTAGGCACT 59.447 50.000 9.13 3.12 46.37 4.40
1883 7815 2.553172 AGCTATGCTACGTACTAGGCAC 59.447 50.000 9.13 0.00 36.99 5.01
1885 7817 5.816777 ACTATAGCTATGCTACGTACTAGGC 59.183 44.000 16.77 0.00 44.24 3.93
1886 7818 7.846644 AACTATAGCTATGCTACGTACTAGG 57.153 40.000 16.77 0.00 44.24 3.02
1893 7825 9.245962 ACAACTTTAAACTATAGCTATGCTACG 57.754 33.333 16.77 2.47 44.24 3.51
1896 7828 9.838339 ATCACAACTTTAAACTATAGCTATGCT 57.162 29.630 16.77 0.00 43.41 3.79
1900 7832 9.817809 CAGGATCACAACTTTAAACTATAGCTA 57.182 33.333 0.00 0.00 0.00 3.32
1901 7833 8.322091 ACAGGATCACAACTTTAAACTATAGCT 58.678 33.333 0.00 0.00 0.00 3.32
1902 7834 8.494016 ACAGGATCACAACTTTAAACTATAGC 57.506 34.615 0.00 0.00 0.00 2.97
1905 7837 8.950210 CATGACAGGATCACAACTTTAAACTAT 58.050 33.333 0.00 0.00 41.24 2.12
1906 7838 8.154203 TCATGACAGGATCACAACTTTAAACTA 58.846 33.333 0.00 0.00 41.24 2.24
1909 7841 9.513906 TTATCATGACAGGATCACAACTTTAAA 57.486 29.630 5.76 0.00 41.24 1.52
1910 7842 9.685276 ATTATCATGACAGGATCACAACTTTAA 57.315 29.630 5.76 0.00 41.24 1.52
1911 7843 9.112725 CATTATCATGACAGGATCACAACTTTA 57.887 33.333 5.76 0.00 41.24 1.85
1912 7844 7.613022 ACATTATCATGACAGGATCACAACTTT 59.387 33.333 5.76 0.00 41.24 2.66
1913 7845 7.114754 ACATTATCATGACAGGATCACAACTT 58.885 34.615 5.76 0.00 41.24 2.66
1914 7846 6.656902 ACATTATCATGACAGGATCACAACT 58.343 36.000 5.76 0.00 41.24 3.16
1916 7848 5.754890 CGACATTATCATGACAGGATCACAA 59.245 40.000 5.76 0.00 41.24 3.33
1918 7850 5.532557 TCGACATTATCATGACAGGATCAC 58.467 41.667 5.76 0.00 41.24 3.06
1919 7851 5.776744 CTCGACATTATCATGACAGGATCA 58.223 41.667 5.76 0.00 43.13 2.92
1920 7852 4.624882 GCTCGACATTATCATGACAGGATC 59.375 45.833 5.76 0.00 34.11 3.36
1921 7853 4.039609 TGCTCGACATTATCATGACAGGAT 59.960 41.667 7.85 7.85 34.11 3.24
1922 7854 3.384467 TGCTCGACATTATCATGACAGGA 59.616 43.478 0.00 0.00 34.11 3.86
1923 7855 3.721035 TGCTCGACATTATCATGACAGG 58.279 45.455 0.00 0.00 34.11 4.00
1924 7856 4.567959 TGTTGCTCGACATTATCATGACAG 59.432 41.667 0.00 0.00 34.11 3.51
1925 7857 4.502962 TGTTGCTCGACATTATCATGACA 58.497 39.130 0.00 0.00 34.11 3.58
1926 7858 5.163864 TGTTGTTGCTCGACATTATCATGAC 60.164 40.000 0.00 0.00 35.71 3.06
1927 7859 4.934602 TGTTGTTGCTCGACATTATCATGA 59.065 37.500 0.00 0.00 35.71 3.07
1929 7861 5.412594 ACTTGTTGTTGCTCGACATTATCAT 59.587 36.000 4.02 0.00 39.82 2.45
1930 7862 4.754618 ACTTGTTGTTGCTCGACATTATCA 59.245 37.500 4.02 0.00 39.82 2.15
1931 7863 5.283060 ACTTGTTGTTGCTCGACATTATC 57.717 39.130 4.02 0.00 39.82 1.75
1932 7864 5.351465 CCTACTTGTTGTTGCTCGACATTAT 59.649 40.000 4.02 0.00 39.82 1.28
1933 7865 4.688879 CCTACTTGTTGTTGCTCGACATTA 59.311 41.667 4.02 0.31 39.82 1.90
1935 7867 3.067106 CCTACTTGTTGTTGCTCGACAT 58.933 45.455 4.02 0.00 39.82 3.06
1936 7868 2.101750 TCCTACTTGTTGTTGCTCGACA 59.898 45.455 0.00 0.00 38.54 4.35
1937 7869 2.750948 TCCTACTTGTTGTTGCTCGAC 58.249 47.619 0.00 0.00 0.00 4.20
1938 7870 3.585862 GATCCTACTTGTTGTTGCTCGA 58.414 45.455 0.00 0.00 0.00 4.04
1939 7871 2.345641 CGATCCTACTTGTTGTTGCTCG 59.654 50.000 0.00 0.00 0.00 5.03
1940 7872 2.673368 CCGATCCTACTTGTTGTTGCTC 59.327 50.000 0.00 0.00 0.00 4.26
1941 7873 2.301870 TCCGATCCTACTTGTTGTTGCT 59.698 45.455 0.00 0.00 0.00 3.91
1942 7874 2.695359 TCCGATCCTACTTGTTGTTGC 58.305 47.619 0.00 0.00 0.00 4.17
1943 7875 4.935205 TGAATCCGATCCTACTTGTTGTTG 59.065 41.667 0.00 0.00 0.00 3.33
1944 7876 5.160607 TGAATCCGATCCTACTTGTTGTT 57.839 39.130 0.00 0.00 0.00 2.83
1945 7877 4.819105 TGAATCCGATCCTACTTGTTGT 57.181 40.909 0.00 0.00 0.00 3.32
1946 7878 7.786178 TTATTGAATCCGATCCTACTTGTTG 57.214 36.000 0.00 0.00 0.00 3.33
1947 7879 8.674607 GTTTTATTGAATCCGATCCTACTTGTT 58.325 33.333 0.00 0.00 0.00 2.83
1948 7880 7.827236 TGTTTTATTGAATCCGATCCTACTTGT 59.173 33.333 0.00 0.00 0.00 3.16
1949 7881 8.208718 TGTTTTATTGAATCCGATCCTACTTG 57.791 34.615 0.00 0.00 0.00 3.16
1950 7882 8.980481 ATGTTTTATTGAATCCGATCCTACTT 57.020 30.769 0.00 0.00 0.00 2.24
1951 7883 7.385205 CGATGTTTTATTGAATCCGATCCTACT 59.615 37.037 0.00 0.00 0.00 2.57
1952 7884 7.384115 TCGATGTTTTATTGAATCCGATCCTAC 59.616 37.037 0.00 0.00 0.00 3.18
1953 7885 7.438564 TCGATGTTTTATTGAATCCGATCCTA 58.561 34.615 0.00 0.00 0.00 2.94
1954 7886 6.288294 TCGATGTTTTATTGAATCCGATCCT 58.712 36.000 0.00 0.00 0.00 3.24
1955 7887 6.539649 TCGATGTTTTATTGAATCCGATCC 57.460 37.500 0.00 0.00 0.00 3.36
1956 7888 9.746711 CTAATCGATGTTTTATTGAATCCGATC 57.253 33.333 0.00 0.00 0.00 3.69
1957 7889 8.230486 GCTAATCGATGTTTTATTGAATCCGAT 58.770 33.333 0.00 0.00 0.00 4.18
1958 7890 7.307751 GGCTAATCGATGTTTTATTGAATCCGA 60.308 37.037 0.00 0.00 0.00 4.55
1959 7891 6.797033 GGCTAATCGATGTTTTATTGAATCCG 59.203 38.462 0.00 0.00 0.00 4.18
1960 7892 7.040409 AGGGCTAATCGATGTTTTATTGAATCC 60.040 37.037 0.00 0.00 0.00 3.01
1961 7893 7.875971 AGGGCTAATCGATGTTTTATTGAATC 58.124 34.615 0.00 0.00 0.00 2.52
1962 7894 7.823745 AGGGCTAATCGATGTTTTATTGAAT 57.176 32.000 0.00 0.00 0.00 2.57
1963 7895 7.639113 AAGGGCTAATCGATGTTTTATTGAA 57.361 32.000 0.00 0.00 0.00 2.69
1964 7896 7.639113 AAAGGGCTAATCGATGTTTTATTGA 57.361 32.000 0.00 0.00 0.00 2.57
1965 7897 8.702163 AAAAAGGGCTAATCGATGTTTTATTG 57.298 30.769 0.00 0.00 0.00 1.90
1988 7920 3.324268 TGCATCATTCCCAGCAAGAAAAA 59.676 39.130 0.00 0.00 33.48 1.94
1989 7921 2.898612 TGCATCATTCCCAGCAAGAAAA 59.101 40.909 0.00 0.00 33.48 2.29
1990 7922 2.527497 TGCATCATTCCCAGCAAGAAA 58.473 42.857 0.00 0.00 33.48 2.52
1991 7923 2.219080 TGCATCATTCCCAGCAAGAA 57.781 45.000 0.00 0.00 33.48 2.52
1992 7924 2.447408 ATGCATCATTCCCAGCAAGA 57.553 45.000 0.00 0.00 40.76 3.02
1993 7925 3.194861 CAAATGCATCATTCCCAGCAAG 58.805 45.455 0.00 0.00 40.76 4.01
1994 7926 2.093394 CCAAATGCATCATTCCCAGCAA 60.093 45.455 0.00 0.00 40.76 3.91
1995 7927 1.483004 CCAAATGCATCATTCCCAGCA 59.517 47.619 0.00 0.00 41.73 4.41
1996 7928 1.808891 GCCAAATGCATCATTCCCAGC 60.809 52.381 0.00 0.00 40.77 4.85
1997 7929 1.760613 AGCCAAATGCATCATTCCCAG 59.239 47.619 0.00 0.00 44.83 4.45
1998 7930 1.758280 GAGCCAAATGCATCATTCCCA 59.242 47.619 0.00 0.00 44.83 4.37
1999 7931 1.758280 TGAGCCAAATGCATCATTCCC 59.242 47.619 0.00 0.00 44.83 3.97
2000 7932 2.802057 GCTGAGCCAAATGCATCATTCC 60.802 50.000 0.00 0.00 44.83 3.01
2001 7933 2.159156 TGCTGAGCCAAATGCATCATTC 60.159 45.455 0.23 0.00 44.83 2.67
2002 7934 1.828595 TGCTGAGCCAAATGCATCATT 59.171 42.857 0.23 0.00 44.83 2.57
2003 7935 1.480789 TGCTGAGCCAAATGCATCAT 58.519 45.000 0.23 0.00 44.83 2.45
2004 7936 1.258676 TTGCTGAGCCAAATGCATCA 58.741 45.000 0.23 0.00 44.83 3.07
2005 7937 2.596904 ATTGCTGAGCCAAATGCATC 57.403 45.000 0.23 0.00 44.83 3.91
2006 7938 2.761767 TGTATTGCTGAGCCAAATGCAT 59.238 40.909 0.23 0.00 44.83 3.96
2007 7939 2.164827 CTGTATTGCTGAGCCAAATGCA 59.835 45.455 0.23 5.08 44.83 3.96
2008 7940 2.424601 TCTGTATTGCTGAGCCAAATGC 59.575 45.455 0.23 0.02 41.71 3.56
2009 7941 4.337274 TCATCTGTATTGCTGAGCCAAATG 59.663 41.667 0.23 0.00 0.00 2.32
2010 7942 4.529897 TCATCTGTATTGCTGAGCCAAAT 58.470 39.130 0.23 0.00 0.00 2.32
2011 7943 3.954200 TCATCTGTATTGCTGAGCCAAA 58.046 40.909 0.23 0.00 0.00 3.28
2012 7944 3.632643 TCATCTGTATTGCTGAGCCAA 57.367 42.857 0.23 0.00 0.00 4.52
2013 7945 3.632643 TTCATCTGTATTGCTGAGCCA 57.367 42.857 0.23 0.00 0.00 4.75
2014 7946 5.163581 ACAAATTCATCTGTATTGCTGAGCC 60.164 40.000 0.23 0.00 0.00 4.70
2015 7947 5.888105 ACAAATTCATCTGTATTGCTGAGC 58.112 37.500 0.00 0.00 0.00 4.26
2016 7948 9.053840 AGATACAAATTCATCTGTATTGCTGAG 57.946 33.333 2.80 0.00 38.55 3.35
2017 7949 8.969260 AGATACAAATTCATCTGTATTGCTGA 57.031 30.769 2.80 0.00 38.55 4.26
2056 10275 7.642071 AAATCAAAATTTCTGTCCATTGACG 57.358 32.000 0.00 0.00 35.93 4.35
2073 10292 4.751098 GGTGCATGCTTTCAGAAAATCAAA 59.249 37.500 20.33 0.00 0.00 2.69
2119 10418 4.447054 CGCATACATTTTTGGTTTCAGCAA 59.553 37.500 0.00 0.00 33.27 3.91
2121 10420 3.367630 CCGCATACATTTTTGGTTTCAGC 59.632 43.478 0.00 0.00 0.00 4.26
2137 10437 1.186200 ACACTCTGCTCTTCCGCATA 58.814 50.000 0.00 0.00 39.52 3.14
2138 10438 1.135915 CTACACTCTGCTCTTCCGCAT 59.864 52.381 0.00 0.00 39.52 4.73
2141 10441 1.133407 GGTCTACACTCTGCTCTTCCG 59.867 57.143 0.00 0.00 0.00 4.30
2142 10442 2.165437 CAGGTCTACACTCTGCTCTTCC 59.835 54.545 0.00 0.00 0.00 3.46
2144 10444 3.162147 TCAGGTCTACACTCTGCTCTT 57.838 47.619 0.00 0.00 0.00 2.85
2146 10446 2.100584 CCATCAGGTCTACACTCTGCTC 59.899 54.545 0.00 0.00 0.00 4.26
2147 10447 2.106566 CCATCAGGTCTACACTCTGCT 58.893 52.381 0.00 0.00 0.00 4.24
2148 10448 2.593346 CCATCAGGTCTACACTCTGC 57.407 55.000 0.00 0.00 0.00 4.26
2160 10460 1.450312 GGCTTCACGGACCATCAGG 60.450 63.158 0.00 0.00 42.21 3.86
2162 10462 1.918293 AGGGCTTCACGGACCATCA 60.918 57.895 0.00 0.00 36.69 3.07
2165 10465 2.847234 ACAGGGCTTCACGGACCA 60.847 61.111 0.00 0.00 36.69 4.02
2167 10467 2.432628 CGACAGGGCTTCACGGAC 60.433 66.667 0.00 0.00 0.00 4.79
2168 10468 2.915659 ACGACAGGGCTTCACGGA 60.916 61.111 0.00 0.00 0.00 4.69
2169 10469 2.738521 CACGACAGGGCTTCACGG 60.739 66.667 0.00 0.00 0.00 4.94
2170 10470 3.414700 GCACGACAGGGCTTCACG 61.415 66.667 0.00 0.00 45.11 4.35
2177 10477 2.046892 CAGGGAAGCACGACAGGG 60.047 66.667 0.00 0.00 0.00 4.45
2178 10478 1.888436 TAGCAGGGAAGCACGACAGG 61.888 60.000 0.00 0.00 36.85 4.00
2179 10479 0.737715 GTAGCAGGGAAGCACGACAG 60.738 60.000 0.00 0.00 36.85 3.51
2180 10480 1.292223 GTAGCAGGGAAGCACGACA 59.708 57.895 0.00 0.00 36.85 4.35
2181 10481 1.448013 GGTAGCAGGGAAGCACGAC 60.448 63.158 0.00 0.00 36.85 4.34
2182 10482 1.192146 AAGGTAGCAGGGAAGCACGA 61.192 55.000 0.00 0.00 36.85 4.35
2183 10483 0.321653 AAAGGTAGCAGGGAAGCACG 60.322 55.000 0.00 0.00 36.85 5.34
2184 10484 1.911057 AAAAGGTAGCAGGGAAGCAC 58.089 50.000 0.00 0.00 36.85 4.40
2221 10521 6.437477 AGAAGAAAAAGGAAGTCAAGGTTTGT 59.563 34.615 0.00 0.00 0.00 2.83
2227 10527 7.934457 TCAATCAGAAGAAAAAGGAAGTCAAG 58.066 34.615 0.00 0.00 0.00 3.02
2245 10545 4.563061 TCGATATGCATCACCTCAATCAG 58.437 43.478 0.19 0.00 0.00 2.90
2249 10549 4.406648 AACTCGATATGCATCACCTCAA 57.593 40.909 0.19 0.00 0.00 3.02
2252 10552 4.769688 TCAAAACTCGATATGCATCACCT 58.230 39.130 0.19 0.00 0.00 4.00
2263 10563 7.925993 TGAATGTTTACAGTTCAAAACTCGAT 58.074 30.769 0.00 0.00 40.46 3.59
2264 10564 7.310072 TGAATGTTTACAGTTCAAAACTCGA 57.690 32.000 0.00 0.00 40.46 4.04
2265 10565 9.658475 TTATGAATGTTTACAGTTCAAAACTCG 57.342 29.630 9.90 0.00 40.46 4.18
2273 10573 9.944663 TGTCAACTTTATGAATGTTTACAGTTC 57.055 29.630 2.59 0.00 31.70 3.01
2283 10583 5.181245 ACCTTCCGTGTCAACTTTATGAATG 59.819 40.000 0.00 0.00 0.00 2.67
2284 10584 5.313712 ACCTTCCGTGTCAACTTTATGAAT 58.686 37.500 0.00 0.00 0.00 2.57
2290 10590 2.943033 CTGAACCTTCCGTGTCAACTTT 59.057 45.455 0.00 0.00 0.00 2.66
2296 10596 2.298163 TCTAACCTGAACCTTCCGTGTC 59.702 50.000 0.00 0.00 0.00 3.67
2302 10602 4.374399 TCACGTTTCTAACCTGAACCTTC 58.626 43.478 0.00 0.00 0.00 3.46
2310 10610 4.569564 GTGACAAACTCACGTTTCTAACCT 59.430 41.667 0.00 0.00 41.23 3.50
2339 10639 3.015327 GCAGAAGATGGCACTCTTTCAT 58.985 45.455 11.64 0.00 35.63 2.57
2393 10693 5.526115 CGATTATGCCTCAATGCTTTCAAT 58.474 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.