Multiple sequence alignment - TraesCS6D01G040800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G040800 chr6D 100.000 2537 0 0 1 2537 16530512 16527976 0.000000e+00 4686
1 TraesCS6D01G040800 chr6D 85.609 952 86 35 746 1658 16523449 16522510 0.000000e+00 952
2 TraesCS6D01G040800 chr6D 88.026 760 61 24 816 1552 16307432 16306680 0.000000e+00 872
3 TraesCS6D01G040800 chr6D 90.769 130 11 1 5 134 136124816 136124688 3.360000e-39 172
4 TraesCS6D01G040800 chr6B 92.606 1704 92 17 1 1693 29069384 29067704 0.000000e+00 2418
5 TraesCS6D01G040800 chr6B 88.149 751 62 21 815 1552 28517507 28516771 0.000000e+00 869
6 TraesCS6D01G040800 chr6B 88.315 736 58 18 826 1549 59294779 59295498 0.000000e+00 857
7 TraesCS6D01G040800 chr6B 87.684 747 60 25 805 1538 59232610 59233337 0.000000e+00 841
8 TraesCS6D01G040800 chr6B 86.030 723 61 25 864 1551 38877583 38878300 0.000000e+00 739
9 TraesCS6D01G040800 chr6B 90.303 165 12 4 1984 2145 29067117 29066954 1.980000e-51 213
10 TraesCS6D01G040800 chr6A 87.884 1205 75 25 516 1693 16802496 16801336 0.000000e+00 1351
11 TraesCS6D01G040800 chr6A 84.426 976 96 38 746 1681 16720458 16719499 0.000000e+00 909
12 TraesCS6D01G040800 chr6A 88.235 748 59 23 815 1540 16658880 16658140 0.000000e+00 867
13 TraesCS6D01G040800 chr6A 94.133 375 22 0 1771 2145 16801059 16800685 2.830000e-159 571
14 TraesCS6D01G040800 chr6A 83.619 525 60 20 746 1250 16683137 16683655 1.060000e-128 470
15 TraesCS6D01G040800 chr3D 80.472 763 107 27 751 1483 611407072 611407822 1.720000e-151 545
16 TraesCS6D01G040800 chr3D 89.003 391 41 2 2149 2537 346196242 346196632 1.360000e-132 483
17 TraesCS6D01G040800 chr3D 89.630 135 12 2 3 136 254036863 254036996 1.210000e-38 171
18 TraesCS6D01G040800 chr7D 90.306 392 35 3 2149 2537 249618438 249618829 6.260000e-141 510
19 TraesCS6D01G040800 chr7D 89.822 393 38 2 2147 2537 5285164 5284772 1.050000e-138 503
20 TraesCS6D01G040800 chr7D 85.973 221 20 8 133 346 527975978 527975762 2.540000e-55 226
21 TraesCS6D01G040800 chr1D 89.514 391 39 2 2149 2537 70581052 70581442 6.310000e-136 494
22 TraesCS6D01G040800 chr1D 88.235 391 44 2 2149 2537 346392614 346392224 1.370000e-127 466
23 TraesCS6D01G040800 chr1D 85.782 211 22 4 133 341 465130920 465131124 1.530000e-52 217
24 TraesCS6D01G040800 chr4A 89.003 391 41 2 2149 2537 618285695 618285305 1.360000e-132 483
25 TraesCS6D01G040800 chr3A 88.747 391 42 2 2149 2537 505233727 505234117 6.350000e-131 477
26 TraesCS6D01G040800 chr3A 88.747 391 39 4 2149 2537 498232468 498232855 8.210000e-130 473
27 TraesCS6D01G040800 chr3B 88.689 389 40 3 2149 2535 257779624 257779238 2.950000e-129 472
28 TraesCS6D01G040800 chr2D 85.590 229 17 12 131 346 56643432 56643657 2.540000e-55 226
29 TraesCS6D01G040800 chr7B 85.253 217 22 7 130 339 565025113 565024900 5.500000e-52 215
30 TraesCS6D01G040800 chr7B 84.772 197 19 9 133 324 158043592 158043782 1.200000e-43 187
31 TraesCS6D01G040800 chr7A 89.143 175 15 4 167 339 20777583 20777755 5.500000e-52 215
32 TraesCS6D01G040800 chr4B 89.143 175 16 2 133 306 112038146 112038318 5.500000e-52 215
33 TraesCS6D01G040800 chr5B 84.163 221 24 8 133 346 86241044 86241260 1.190000e-48 204
34 TraesCS6D01G040800 chr5B 83.871 217 25 7 131 339 697452964 697452750 5.540000e-47 198
35 TraesCS6D01G040800 chr5B 90.152 132 11 2 5 136 228823661 228823532 1.210000e-38 171
36 TraesCS6D01G040800 chr4D 93.182 132 8 1 5 136 264483958 264483828 2.580000e-45 193
37 TraesCS6D01G040800 chr4D 90.370 135 10 3 3 136 318598762 318598894 9.330000e-40 174
38 TraesCS6D01G040800 chr2A 91.852 135 8 3 3 136 517404363 517404231 4.310000e-43 185
39 TraesCS6D01G040800 chr2A 82.843 204 27 7 141 339 740047740 740047940 2.590000e-40 176
40 TraesCS6D01G040800 chr2B 90.909 132 11 1 5 136 667095622 667095752 2.590000e-40 176
41 TraesCS6D01G040800 chr2B 81.604 212 29 8 141 346 741971694 741971901 1.560000e-37 167
42 TraesCS6D01G040800 chr1A 90.909 132 10 2 5 136 354203889 354203760 2.590000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G040800 chr6D 16527976 16530512 2536 True 4686.0 4686 100.0000 1 2537 1 chr6D.!!$R3 2536
1 TraesCS6D01G040800 chr6D 16522510 16523449 939 True 952.0 952 85.6090 746 1658 1 chr6D.!!$R2 912
2 TraesCS6D01G040800 chr6D 16306680 16307432 752 True 872.0 872 88.0260 816 1552 1 chr6D.!!$R1 736
3 TraesCS6D01G040800 chr6B 29066954 29069384 2430 True 1315.5 2418 91.4545 1 2145 2 chr6B.!!$R2 2144
4 TraesCS6D01G040800 chr6B 28516771 28517507 736 True 869.0 869 88.1490 815 1552 1 chr6B.!!$R1 737
5 TraesCS6D01G040800 chr6B 59294779 59295498 719 False 857.0 857 88.3150 826 1549 1 chr6B.!!$F3 723
6 TraesCS6D01G040800 chr6B 59232610 59233337 727 False 841.0 841 87.6840 805 1538 1 chr6B.!!$F2 733
7 TraesCS6D01G040800 chr6B 38877583 38878300 717 False 739.0 739 86.0300 864 1551 1 chr6B.!!$F1 687
8 TraesCS6D01G040800 chr6A 16800685 16802496 1811 True 961.0 1351 91.0085 516 2145 2 chr6A.!!$R3 1629
9 TraesCS6D01G040800 chr6A 16719499 16720458 959 True 909.0 909 84.4260 746 1681 1 chr6A.!!$R2 935
10 TraesCS6D01G040800 chr6A 16658140 16658880 740 True 867.0 867 88.2350 815 1540 1 chr6A.!!$R1 725
11 TraesCS6D01G040800 chr6A 16683137 16683655 518 False 470.0 470 83.6190 746 1250 1 chr6A.!!$F1 504
12 TraesCS6D01G040800 chr3D 611407072 611407822 750 False 545.0 545 80.4720 751 1483 1 chr3D.!!$F3 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 396 1.199097 CCATTCCTTCGTTTTCCGGTG 59.801 52.381 0.0 0.0 37.11 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2222 2805 0.029834 GTCTGCTGCACTGGTTGTTG 59.97 55.0 0.0 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 6.100404 AGCCTTAGCAATTGAATTGTCAAA 57.900 33.333 18.12 9.70 43.95 2.69
104 105 4.397420 TGAGAAGTTATTTCCTTGCAGCA 58.603 39.130 0.00 0.00 36.40 4.41
180 181 8.361139 TGAACTTTCAACAAGTTTGTAAAAGGA 58.639 29.630 22.87 12.40 42.40 3.36
332 333 7.039270 TCGTCAAAGCTAATATGCAGAGTAAA 58.961 34.615 0.00 0.00 34.99 2.01
376 377 3.984508 CATGAGATTCATGTGCCTTCC 57.015 47.619 10.20 0.00 46.80 3.46
392 393 2.161609 CCTTCCATTCCTTCGTTTTCCG 59.838 50.000 0.00 0.00 38.13 4.30
395 396 1.199097 CCATTCCTTCGTTTTCCGGTG 59.801 52.381 0.00 0.00 37.11 4.94
404 405 4.131202 TCGTTTTCCGGTGTTTAAATCG 57.869 40.909 0.00 5.55 37.11 3.34
422 423 6.484818 AAATCGAAATTTGCCAAATTGAGG 57.515 33.333 15.69 8.52 40.05 3.86
431 432 3.291584 TGCCAAATTGAGGTGTACAACA 58.708 40.909 14.58 4.16 0.00 3.33
613 614 4.640201 GGGATTAGCTACAATGAGCAAACA 59.360 41.667 0.00 0.00 45.43 2.83
631 632 1.944709 ACACCTGTACGTGGAAAAAGC 59.055 47.619 11.10 0.00 38.11 3.51
660 662 5.265989 TGGACTAAAAATATGGGTGGGAAC 58.734 41.667 0.00 0.00 0.00 3.62
668 670 5.937975 AATATGGGTGGGAACAATGAAAG 57.062 39.130 0.00 0.00 46.06 2.62
697 699 6.522054 TGTTCAAGTGTTAAAACAAAACCCA 58.478 32.000 0.00 0.00 41.21 4.51
698 700 6.990349 TGTTCAAGTGTTAAAACAAAACCCAA 59.010 30.769 0.00 0.00 41.21 4.12
740 742 4.374702 GCGAAGTGTGCTGCGTGG 62.375 66.667 0.00 0.00 45.38 4.94
831 835 3.154473 CGCTCCCCTCCGATCCAA 61.154 66.667 0.00 0.00 0.00 3.53
832 836 2.506472 GCTCCCCTCCGATCCAAC 59.494 66.667 0.00 0.00 0.00 3.77
833 837 2.815308 CTCCCCTCCGATCCAACG 59.185 66.667 0.00 0.00 0.00 4.10
841 845 4.147322 CGATCCAACGGTGCGCAC 62.147 66.667 32.15 32.15 0.00 5.34
980 1089 1.212751 CACCACAGCATCTCGTCGA 59.787 57.895 0.00 0.00 0.00 4.20
1449 1602 1.925972 GCTCCCCAAGAAGTCCCCT 60.926 63.158 0.00 0.00 0.00 4.79
1503 1662 1.122019 AGAAGACCACCGCCAAGTCT 61.122 55.000 0.00 0.00 42.58 3.24
1518 1677 3.321497 CAAGTCTCCCAAGAAGAAGACG 58.679 50.000 0.00 0.00 31.93 4.18
1544 1703 4.530857 CAAGGAGTAGCCGCCCCG 62.531 72.222 0.00 0.00 43.43 5.73
1588 1756 3.576118 CCGTATCAGGGAGAAGATGATGT 59.424 47.826 0.00 0.00 35.39 3.06
1600 1768 6.015940 GGAGAAGATGATGTGACTTTTGGTTT 60.016 38.462 0.00 0.00 0.00 3.27
1613 1781 6.015519 TGACTTTTGGTTTATTGGATCCTGTG 60.016 38.462 14.23 0.00 0.00 3.66
1638 1808 3.533606 AATGCTAGTCTGTAGTGGCTG 57.466 47.619 0.00 0.00 33.85 4.85
1666 1836 3.678056 AGTTCGATGAACAAGCCAGTA 57.322 42.857 11.81 0.00 44.11 2.74
1695 1865 9.922305 GACTGTATTTTACATGTGATTTAGAGC 57.078 33.333 9.11 0.00 38.15 4.09
1696 1866 9.672673 ACTGTATTTTACATGTGATTTAGAGCT 57.327 29.630 9.11 0.00 38.15 4.09
1697 1867 9.926751 CTGTATTTTACATGTGATTTAGAGCTG 57.073 33.333 9.11 0.00 38.15 4.24
1700 1870 6.985188 TTTACATGTGATTTAGAGCTGGTC 57.015 37.500 9.11 0.00 0.00 4.02
1701 1871 4.833478 ACATGTGATTTAGAGCTGGTCT 57.167 40.909 14.43 14.43 39.59 3.85
1702 1872 4.764172 ACATGTGATTTAGAGCTGGTCTC 58.236 43.478 13.35 0.00 42.21 3.36
1703 1873 3.895232 TGTGATTTAGAGCTGGTCTCC 57.105 47.619 13.35 2.56 42.90 3.71
1704 1874 3.173151 TGTGATTTAGAGCTGGTCTCCA 58.827 45.455 13.35 5.06 42.90 3.86
1705 1875 3.582647 TGTGATTTAGAGCTGGTCTCCAA 59.417 43.478 13.35 8.13 42.90 3.53
1706 1876 4.041567 TGTGATTTAGAGCTGGTCTCCAAA 59.958 41.667 13.35 9.70 42.90 3.28
1709 1879 3.685139 TTAGAGCTGGTCTCCAAACTG 57.315 47.619 13.35 0.00 42.90 3.16
1713 2253 1.202818 AGCTGGTCTCCAAACTGAACC 60.203 52.381 0.00 0.00 30.80 3.62
1714 2254 1.476833 GCTGGTCTCCAAACTGAACCA 60.477 52.381 0.00 0.00 30.80 3.67
1728 2268 7.275183 CAAACTGAACCATGGATAGTCAGATA 58.725 38.462 29.28 6.73 0.00 1.98
1729 2269 7.623999 AACTGAACCATGGATAGTCAGATAT 57.376 36.000 29.28 18.82 0.00 1.63
1730 2270 8.727100 AACTGAACCATGGATAGTCAGATATA 57.273 34.615 29.28 5.97 0.00 0.86
1731 2271 8.128322 ACTGAACCATGGATAGTCAGATATAC 57.872 38.462 29.28 4.83 0.00 1.47
1732 2272 7.094162 ACTGAACCATGGATAGTCAGATATACG 60.094 40.741 29.28 13.89 0.00 3.06
1733 2273 6.719829 TGAACCATGGATAGTCAGATATACGT 59.280 38.462 21.47 0.00 0.00 3.57
1734 2274 7.886446 TGAACCATGGATAGTCAGATATACGTA 59.114 37.037 21.47 0.00 0.00 3.57
1735 2275 7.627298 ACCATGGATAGTCAGATATACGTAC 57.373 40.000 21.47 0.00 0.00 3.67
1736 2276 6.315642 ACCATGGATAGTCAGATATACGTACG 59.684 42.308 21.47 15.01 0.00 3.67
1737 2277 6.315642 CCATGGATAGTCAGATATACGTACGT 59.684 42.308 25.98 25.98 0.00 3.57
1738 2278 7.493645 CCATGGATAGTCAGATATACGTACGTA 59.506 40.741 28.62 28.62 34.87 3.57
1739 2279 8.876790 CATGGATAGTCAGATATACGTACGTAA 58.123 37.037 29.91 19.36 33.99 3.18
1762 2302 6.538189 ACAAACCACAAAACTGAAAAACTG 57.462 33.333 0.00 0.00 0.00 3.16
1763 2303 6.284459 ACAAACCACAAAACTGAAAAACTGA 58.716 32.000 0.00 0.00 0.00 3.41
1764 2304 6.201997 ACAAACCACAAAACTGAAAAACTGAC 59.798 34.615 0.00 0.00 0.00 3.51
1766 2306 4.282195 ACCACAAAACTGAAAAACTGACCA 59.718 37.500 0.00 0.00 0.00 4.02
1767 2307 5.221541 ACCACAAAACTGAAAAACTGACCAA 60.222 36.000 0.00 0.00 0.00 3.67
1768 2308 5.698545 CCACAAAACTGAAAAACTGACCAAA 59.301 36.000 0.00 0.00 0.00 3.28
1769 2309 6.347321 CCACAAAACTGAAAAACTGACCAAAC 60.347 38.462 0.00 0.00 0.00 2.93
1773 2334 3.447229 ACTGAAAAACTGACCAAACAGGG 59.553 43.478 0.00 0.00 43.89 4.45
1801 2362 1.321474 ATGTGCCACTGACCAAACAG 58.679 50.000 0.00 0.00 42.78 3.16
1813 2374 2.234168 GACCAAACAGGGTACTCTCTCC 59.766 54.545 0.00 0.00 42.53 3.71
1825 2386 6.714356 AGGGTACTCTCTCCGTACATTAATAC 59.286 42.308 0.00 0.00 39.11 1.89
1948 2528 8.335532 TCAAAGGACAAATTATCCAGTACAAG 57.664 34.615 10.51 0.00 38.86 3.16
1956 2536 9.912634 ACAAATTATCCAGTACAAGAATGTTTG 57.087 29.630 0.00 6.75 41.05 2.93
1957 2537 9.912634 CAAATTATCCAGTACAAGAATGTTTGT 57.087 29.630 0.00 1.34 43.34 2.83
1960 2540 5.304686 TCCAGTACAAGAATGTTTGTCCT 57.695 39.130 0.00 0.00 41.31 3.85
1972 2552 0.991920 TTTGTCCTAGGAGGGCCAAG 59.008 55.000 13.15 0.00 39.91 3.61
1989 2569 4.441495 GGCCAAGATTGCTGGGTAAATAAC 60.441 45.833 0.00 0.00 37.56 1.89
2034 2615 9.117145 CATGTTCATCAATAAAACACACACTAC 57.883 33.333 0.00 0.00 35.87 2.73
2145 2728 3.142951 ACATTTAGCGCCAACTGTAACA 58.857 40.909 9.64 0.00 0.00 2.41
2146 2729 3.188460 ACATTTAGCGCCAACTGTAACAG 59.812 43.478 9.64 0.00 37.52 3.16
2147 2730 1.803334 TTAGCGCCAACTGTAACAGG 58.197 50.000 2.29 0.00 35.51 4.00
2148 2731 0.682852 TAGCGCCAACTGTAACAGGT 59.317 50.000 2.29 0.00 35.51 4.00
2149 2732 0.682852 AGCGCCAACTGTAACAGGTA 59.317 50.000 2.29 0.00 35.51 3.08
2150 2733 1.071071 AGCGCCAACTGTAACAGGTAA 59.929 47.619 2.29 0.00 35.51 2.85
2151 2734 2.081462 GCGCCAACTGTAACAGGTAAT 58.919 47.619 0.00 0.00 35.51 1.89
2152 2735 2.159572 GCGCCAACTGTAACAGGTAATG 60.160 50.000 0.00 0.00 35.51 1.90
2153 2736 3.071479 CGCCAACTGTAACAGGTAATGT 58.929 45.455 0.00 0.00 46.97 2.71
2154 2737 4.247258 CGCCAACTGTAACAGGTAATGTA 58.753 43.478 0.00 0.00 43.00 2.29
2155 2738 4.328983 CGCCAACTGTAACAGGTAATGTAG 59.671 45.833 0.00 0.00 43.00 2.74
2156 2739 5.484715 GCCAACTGTAACAGGTAATGTAGA 58.515 41.667 0.00 0.00 43.00 2.59
2157 2740 5.581085 GCCAACTGTAACAGGTAATGTAGAG 59.419 44.000 0.00 0.00 43.00 2.43
2158 2741 6.698380 CCAACTGTAACAGGTAATGTAGAGT 58.302 40.000 0.00 0.00 43.00 3.24
2159 2742 6.590292 CCAACTGTAACAGGTAATGTAGAGTG 59.410 42.308 0.00 0.00 43.00 3.51
2160 2743 5.721232 ACTGTAACAGGTAATGTAGAGTGC 58.279 41.667 0.00 0.00 43.00 4.40
2161 2744 5.480772 ACTGTAACAGGTAATGTAGAGTGCT 59.519 40.000 0.00 0.00 43.00 4.40
2162 2745 5.962433 TGTAACAGGTAATGTAGAGTGCTC 58.038 41.667 0.00 0.00 43.00 4.26
2163 2746 5.715279 TGTAACAGGTAATGTAGAGTGCTCT 59.285 40.000 6.94 6.94 43.00 4.09
2164 2747 4.993029 ACAGGTAATGTAGAGTGCTCTC 57.007 45.455 7.73 7.73 41.60 3.20
2165 2748 4.344978 ACAGGTAATGTAGAGTGCTCTCA 58.655 43.478 17.51 4.73 41.60 3.27
2166 2749 4.158764 ACAGGTAATGTAGAGTGCTCTCAC 59.841 45.833 17.51 13.09 41.60 3.51
2176 2759 2.829741 GTGCTCTCACTCCCCATATC 57.170 55.000 0.00 0.00 40.03 1.63
2177 2760 2.324541 GTGCTCTCACTCCCCATATCT 58.675 52.381 0.00 0.00 40.03 1.98
2178 2761 3.501349 GTGCTCTCACTCCCCATATCTA 58.499 50.000 0.00 0.00 40.03 1.98
2179 2762 3.898123 GTGCTCTCACTCCCCATATCTAA 59.102 47.826 0.00 0.00 40.03 2.10
2180 2763 4.345257 GTGCTCTCACTCCCCATATCTAAA 59.655 45.833 0.00 0.00 40.03 1.85
2181 2764 4.968719 TGCTCTCACTCCCCATATCTAAAA 59.031 41.667 0.00 0.00 0.00 1.52
2182 2765 5.163301 TGCTCTCACTCCCCATATCTAAAAC 60.163 44.000 0.00 0.00 0.00 2.43
2183 2766 5.071115 GCTCTCACTCCCCATATCTAAAACT 59.929 44.000 0.00 0.00 0.00 2.66
2184 2767 6.485830 TCTCACTCCCCATATCTAAAACTG 57.514 41.667 0.00 0.00 0.00 3.16
2185 2768 5.366768 TCTCACTCCCCATATCTAAAACTGG 59.633 44.000 0.00 0.00 0.00 4.00
2186 2769 5.036916 TCACTCCCCATATCTAAAACTGGT 58.963 41.667 0.00 0.00 0.00 4.00
2187 2770 5.104527 TCACTCCCCATATCTAAAACTGGTG 60.105 44.000 0.00 0.00 0.00 4.17
2188 2771 4.788617 ACTCCCCATATCTAAAACTGGTGT 59.211 41.667 0.00 0.00 0.00 4.16
2189 2772 5.104485 ACTCCCCATATCTAAAACTGGTGTC 60.104 44.000 0.00 0.00 0.00 3.67
2190 2773 4.127171 CCCCATATCTAAAACTGGTGTCG 58.873 47.826 0.00 0.00 0.00 4.35
2191 2774 4.383770 CCCCATATCTAAAACTGGTGTCGT 60.384 45.833 0.00 0.00 0.00 4.34
2192 2775 5.183228 CCCATATCTAAAACTGGTGTCGTT 58.817 41.667 0.00 0.00 0.00 3.85
2193 2776 5.064707 CCCATATCTAAAACTGGTGTCGTTG 59.935 44.000 0.00 0.00 0.00 4.10
2194 2777 5.447279 CCATATCTAAAACTGGTGTCGTTGC 60.447 44.000 0.00 0.00 0.00 4.17
2195 2778 2.215196 TCTAAAACTGGTGTCGTTGCC 58.785 47.619 0.00 0.00 0.00 4.52
2196 2779 1.944024 CTAAAACTGGTGTCGTTGCCA 59.056 47.619 0.00 0.00 0.00 4.92
2197 2780 1.178276 AAAACTGGTGTCGTTGCCAA 58.822 45.000 0.00 0.00 33.93 4.52
2198 2781 1.398692 AAACTGGTGTCGTTGCCAAT 58.601 45.000 0.00 0.00 33.93 3.16
2199 2782 0.951558 AACTGGTGTCGTTGCCAATC 59.048 50.000 0.00 0.00 33.93 2.67
2200 2783 0.889186 ACTGGTGTCGTTGCCAATCC 60.889 55.000 0.00 0.00 33.93 3.01
2201 2784 0.888736 CTGGTGTCGTTGCCAATCCA 60.889 55.000 0.00 0.00 33.93 3.41
2202 2785 0.251121 TGGTGTCGTTGCCAATCCAT 60.251 50.000 0.00 0.00 0.00 3.41
2203 2786 0.887933 GGTGTCGTTGCCAATCCATT 59.112 50.000 0.00 0.00 0.00 3.16
2204 2787 1.135402 GGTGTCGTTGCCAATCCATTC 60.135 52.381 0.00 0.00 0.00 2.67
2205 2788 1.539388 GTGTCGTTGCCAATCCATTCA 59.461 47.619 0.00 0.00 0.00 2.57
2206 2789 1.539388 TGTCGTTGCCAATCCATTCAC 59.461 47.619 0.00 0.00 0.00 3.18
2207 2790 1.539388 GTCGTTGCCAATCCATTCACA 59.461 47.619 0.00 0.00 0.00 3.58
2208 2791 2.164219 GTCGTTGCCAATCCATTCACAT 59.836 45.455 0.00 0.00 0.00 3.21
2209 2792 3.376859 GTCGTTGCCAATCCATTCACATA 59.623 43.478 0.00 0.00 0.00 2.29
2210 2793 4.013050 TCGTTGCCAATCCATTCACATAA 58.987 39.130 0.00 0.00 0.00 1.90
2211 2794 4.104776 CGTTGCCAATCCATTCACATAAC 58.895 43.478 0.00 0.00 0.00 1.89
2212 2795 4.104776 GTTGCCAATCCATTCACATAACG 58.895 43.478 0.00 0.00 0.00 3.18
2213 2796 3.351740 TGCCAATCCATTCACATAACGT 58.648 40.909 0.00 0.00 0.00 3.99
2214 2797 4.518249 TGCCAATCCATTCACATAACGTA 58.482 39.130 0.00 0.00 0.00 3.57
2215 2798 5.129634 TGCCAATCCATTCACATAACGTAT 58.870 37.500 0.00 0.00 0.00 3.06
2216 2799 5.238432 TGCCAATCCATTCACATAACGTATC 59.762 40.000 0.00 0.00 0.00 2.24
2217 2800 5.614668 GCCAATCCATTCACATAACGTATCG 60.615 44.000 0.00 0.00 0.00 2.92
2218 2801 5.107104 CCAATCCATTCACATAACGTATCGG 60.107 44.000 0.00 0.00 0.00 4.18
2219 2802 4.922471 TCCATTCACATAACGTATCGGA 57.078 40.909 0.00 0.00 0.00 4.55
2220 2803 5.265350 TCCATTCACATAACGTATCGGAA 57.735 39.130 0.00 0.00 0.00 4.30
2221 2804 5.045215 TCCATTCACATAACGTATCGGAAC 58.955 41.667 0.00 0.00 0.00 3.62
2222 2805 4.210537 CCATTCACATAACGTATCGGAACC 59.789 45.833 0.00 0.00 0.00 3.62
2223 2806 4.453177 TTCACATAACGTATCGGAACCA 57.547 40.909 0.00 0.00 0.00 3.67
2224 2807 4.453177 TCACATAACGTATCGGAACCAA 57.547 40.909 0.00 0.00 0.00 3.67
2225 2808 4.175516 TCACATAACGTATCGGAACCAAC 58.824 43.478 0.00 0.00 0.00 3.77
2226 2809 3.927758 CACATAACGTATCGGAACCAACA 59.072 43.478 0.00 0.00 0.00 3.33
2227 2810 4.389382 CACATAACGTATCGGAACCAACAA 59.611 41.667 0.00 0.00 0.00 2.83
2228 2811 4.389687 ACATAACGTATCGGAACCAACAAC 59.610 41.667 0.00 0.00 0.00 3.32
2229 2812 1.799544 ACGTATCGGAACCAACAACC 58.200 50.000 0.00 0.00 0.00 3.77
2230 2813 1.070445 ACGTATCGGAACCAACAACCA 59.930 47.619 0.00 0.00 0.00 3.67
2231 2814 1.730064 CGTATCGGAACCAACAACCAG 59.270 52.381 0.00 0.00 0.00 4.00
2232 2815 2.774687 GTATCGGAACCAACAACCAGT 58.225 47.619 0.00 0.00 0.00 4.00
2233 2816 1.604604 ATCGGAACCAACAACCAGTG 58.395 50.000 0.00 0.00 0.00 3.66
2234 2817 1.098712 TCGGAACCAACAACCAGTGC 61.099 55.000 0.00 0.00 0.00 4.40
2235 2818 1.380403 CGGAACCAACAACCAGTGCA 61.380 55.000 0.00 0.00 0.00 4.57
2236 2819 0.385390 GGAACCAACAACCAGTGCAG 59.615 55.000 0.00 0.00 0.00 4.41
2237 2820 0.249031 GAACCAACAACCAGTGCAGC 60.249 55.000 0.00 0.00 0.00 5.25
2238 2821 0.969917 AACCAACAACCAGTGCAGCA 60.970 50.000 0.00 0.00 0.00 4.41
2239 2822 1.361271 CCAACAACCAGTGCAGCAG 59.639 57.895 0.00 0.00 0.00 4.24
2240 2823 1.102809 CCAACAACCAGTGCAGCAGA 61.103 55.000 0.00 0.00 0.00 4.26
2241 2824 0.029834 CAACAACCAGTGCAGCAGAC 59.970 55.000 0.00 0.00 0.00 3.51
2242 2825 1.103398 AACAACCAGTGCAGCAGACC 61.103 55.000 0.00 0.00 0.00 3.85
2243 2826 1.228063 CAACCAGTGCAGCAGACCT 60.228 57.895 0.00 0.00 0.00 3.85
2244 2827 0.035317 CAACCAGTGCAGCAGACCTA 59.965 55.000 0.00 0.00 0.00 3.08
2245 2828 0.764890 AACCAGTGCAGCAGACCTAA 59.235 50.000 0.00 0.00 0.00 2.69
2246 2829 0.764890 ACCAGTGCAGCAGACCTAAA 59.235 50.000 0.00 0.00 0.00 1.85
2247 2830 1.271054 ACCAGTGCAGCAGACCTAAAG 60.271 52.381 0.00 0.00 0.00 1.85
2248 2831 0.801251 CAGTGCAGCAGACCTAAAGC 59.199 55.000 0.00 0.00 0.00 3.51
2249 2832 0.671781 AGTGCAGCAGACCTAAAGCG 60.672 55.000 0.00 0.00 0.00 4.68
2250 2833 2.034879 TGCAGCAGACCTAAAGCGC 61.035 57.895 0.00 0.00 0.00 5.92
2251 2834 2.034879 GCAGCAGACCTAAAGCGCA 61.035 57.895 11.47 0.00 0.00 6.09
2252 2835 1.790387 CAGCAGACCTAAAGCGCAC 59.210 57.895 11.47 0.00 0.00 5.34
2253 2836 0.950555 CAGCAGACCTAAAGCGCACA 60.951 55.000 11.47 0.00 0.00 4.57
2254 2837 0.951040 AGCAGACCTAAAGCGCACAC 60.951 55.000 11.47 0.00 0.00 3.82
2255 2838 1.912371 GCAGACCTAAAGCGCACACC 61.912 60.000 11.47 0.00 0.00 4.16
2256 2839 0.602638 CAGACCTAAAGCGCACACCA 60.603 55.000 11.47 0.00 0.00 4.17
2257 2840 0.602905 AGACCTAAAGCGCACACCAC 60.603 55.000 11.47 0.00 0.00 4.16
2258 2841 0.882927 GACCTAAAGCGCACACCACA 60.883 55.000 11.47 0.00 0.00 4.17
2259 2842 0.250727 ACCTAAAGCGCACACCACAT 60.251 50.000 11.47 0.00 0.00 3.21
2260 2843 0.168788 CCTAAAGCGCACACCACATG 59.831 55.000 11.47 0.00 0.00 3.21
2261 2844 0.454957 CTAAAGCGCACACCACATGC 60.455 55.000 11.47 0.00 39.81 4.06
2262 2845 1.169034 TAAAGCGCACACCACATGCA 61.169 50.000 11.47 0.00 43.57 3.96
2263 2846 2.682256 AAAGCGCACACCACATGCAC 62.682 55.000 11.47 0.00 43.57 4.57
2264 2847 3.963647 GCGCACACCACATGCACA 61.964 61.111 0.30 0.00 43.57 4.57
2265 2848 2.051076 CGCACACCACATGCACAC 60.051 61.111 0.00 0.00 43.57 3.82
2266 2849 2.832449 CGCACACCACATGCACACA 61.832 57.895 0.00 0.00 43.57 3.72
2267 2850 1.661480 GCACACCACATGCACACAT 59.339 52.632 0.00 0.00 42.88 3.21
2268 2851 0.032403 GCACACCACATGCACACATT 59.968 50.000 0.00 0.00 42.88 2.71
2269 2852 1.538634 GCACACCACATGCACACATTT 60.539 47.619 0.00 0.00 42.88 2.32
2270 2853 2.823984 CACACCACATGCACACATTTT 58.176 42.857 0.00 0.00 32.87 1.82
2271 2854 3.798206 GCACACCACATGCACACATTTTA 60.798 43.478 0.00 0.00 42.88 1.52
2272 2855 3.982701 CACACCACATGCACACATTTTAG 59.017 43.478 0.00 0.00 32.87 1.85
2273 2856 3.888323 ACACCACATGCACACATTTTAGA 59.112 39.130 0.00 0.00 32.87 2.10
2274 2857 4.340666 ACACCACATGCACACATTTTAGAA 59.659 37.500 0.00 0.00 32.87 2.10
2275 2858 4.919168 CACCACATGCACACATTTTAGAAG 59.081 41.667 0.00 0.00 32.87 2.85
2276 2859 3.922240 CCACATGCACACATTTTAGAAGC 59.078 43.478 0.00 0.00 32.87 3.86
2277 2860 3.922240 CACATGCACACATTTTAGAAGCC 59.078 43.478 0.00 0.00 32.87 4.35
2278 2861 2.987413 TGCACACATTTTAGAAGCCG 57.013 45.000 0.00 0.00 0.00 5.52
2279 2862 1.068610 TGCACACATTTTAGAAGCCGC 60.069 47.619 0.00 0.00 0.00 6.53
2280 2863 1.732405 GCACACATTTTAGAAGCCGCC 60.732 52.381 0.00 0.00 0.00 6.13
2281 2864 1.539388 CACACATTTTAGAAGCCGCCA 59.461 47.619 0.00 0.00 0.00 5.69
2282 2865 2.164219 CACACATTTTAGAAGCCGCCAT 59.836 45.455 0.00 0.00 0.00 4.40
2283 2866 2.423538 ACACATTTTAGAAGCCGCCATC 59.576 45.455 0.00 0.00 0.00 3.51
2284 2867 2.024414 ACATTTTAGAAGCCGCCATCC 58.976 47.619 0.00 0.00 0.00 3.51
2285 2868 2.301346 CATTTTAGAAGCCGCCATCCT 58.699 47.619 0.00 0.00 0.00 3.24
2286 2869 2.038387 TTTTAGAAGCCGCCATCCTC 57.962 50.000 0.00 0.00 0.00 3.71
2287 2870 0.908910 TTTAGAAGCCGCCATCCTCA 59.091 50.000 0.00 0.00 0.00 3.86
2288 2871 1.131638 TTAGAAGCCGCCATCCTCAT 58.868 50.000 0.00 0.00 0.00 2.90
2289 2872 0.681733 TAGAAGCCGCCATCCTCATC 59.318 55.000 0.00 0.00 0.00 2.92
2290 2873 1.958205 GAAGCCGCCATCCTCATCG 60.958 63.158 0.00 0.00 0.00 3.84
2291 2874 2.369257 GAAGCCGCCATCCTCATCGA 62.369 60.000 0.00 0.00 0.00 3.59
2292 2875 2.650813 AAGCCGCCATCCTCATCGAC 62.651 60.000 0.00 0.00 0.00 4.20
2293 2876 2.029666 CCGCCATCCTCATCGACC 59.970 66.667 0.00 0.00 0.00 4.79
2294 2877 2.796193 CCGCCATCCTCATCGACCA 61.796 63.158 0.00 0.00 0.00 4.02
2295 2878 1.368950 CGCCATCCTCATCGACCAT 59.631 57.895 0.00 0.00 0.00 3.55
2296 2879 0.250038 CGCCATCCTCATCGACCATT 60.250 55.000 0.00 0.00 0.00 3.16
2297 2880 1.233019 GCCATCCTCATCGACCATTG 58.767 55.000 0.00 0.00 0.00 2.82
2298 2881 1.202687 GCCATCCTCATCGACCATTGA 60.203 52.381 0.00 0.00 0.00 2.57
2299 2882 2.487934 CCATCCTCATCGACCATTGAC 58.512 52.381 0.00 0.00 0.00 3.18
2300 2883 2.487934 CATCCTCATCGACCATTGACC 58.512 52.381 0.00 0.00 0.00 4.02
2301 2884 0.830648 TCCTCATCGACCATTGACCC 59.169 55.000 0.00 0.00 0.00 4.46
2302 2885 0.541392 CCTCATCGACCATTGACCCA 59.459 55.000 0.00 0.00 0.00 4.51
2303 2886 1.141657 CCTCATCGACCATTGACCCAT 59.858 52.381 0.00 0.00 0.00 4.00
2304 2887 2.487934 CTCATCGACCATTGACCCATC 58.512 52.381 0.00 0.00 0.00 3.51
2305 2888 2.103771 CTCATCGACCATTGACCCATCT 59.896 50.000 0.00 0.00 0.00 2.90
2306 2889 2.505407 TCATCGACCATTGACCCATCTT 59.495 45.455 0.00 0.00 0.00 2.40
2307 2890 2.401583 TCGACCATTGACCCATCTTG 57.598 50.000 0.00 0.00 0.00 3.02
2308 2891 1.905894 TCGACCATTGACCCATCTTGA 59.094 47.619 0.00 0.00 0.00 3.02
2309 2892 2.093500 TCGACCATTGACCCATCTTGAG 60.093 50.000 0.00 0.00 0.00 3.02
2310 2893 2.648059 GACCATTGACCCATCTTGAGG 58.352 52.381 0.00 0.00 0.00 3.86
2311 2894 2.239654 GACCATTGACCCATCTTGAGGA 59.760 50.000 0.00 0.00 0.00 3.71
2312 2895 2.240667 ACCATTGACCCATCTTGAGGAG 59.759 50.000 0.00 0.00 0.00 3.69
2313 2896 2.507058 CCATTGACCCATCTTGAGGAGA 59.493 50.000 0.00 0.00 39.13 3.71
2314 2897 3.433314 CCATTGACCCATCTTGAGGAGAG 60.433 52.174 0.00 0.00 37.93 3.20
2315 2898 2.928036 TGACCCATCTTGAGGAGAGA 57.072 50.000 0.00 0.00 37.93 3.10
2316 2899 2.744760 TGACCCATCTTGAGGAGAGAG 58.255 52.381 0.00 0.00 37.93 3.20
2317 2900 2.313041 TGACCCATCTTGAGGAGAGAGA 59.687 50.000 0.00 0.00 37.93 3.10
2318 2901 3.052262 TGACCCATCTTGAGGAGAGAGAT 60.052 47.826 0.00 0.00 37.93 2.75
2319 2902 3.573967 GACCCATCTTGAGGAGAGAGATC 59.426 52.174 0.00 0.00 37.93 2.75
2320 2903 3.207321 ACCCATCTTGAGGAGAGAGATCT 59.793 47.826 0.00 0.00 37.93 2.75
2321 2904 3.575256 CCCATCTTGAGGAGAGAGATCTG 59.425 52.174 0.00 0.00 37.93 2.90
2322 2905 3.006110 CCATCTTGAGGAGAGAGATCTGC 59.994 52.174 0.00 0.00 37.93 4.26
2323 2906 3.378861 TCTTGAGGAGAGAGATCTGCA 57.621 47.619 0.00 0.00 0.00 4.41
2324 2907 3.913509 TCTTGAGGAGAGAGATCTGCAT 58.086 45.455 0.00 0.00 0.00 3.96
2325 2908 3.890756 TCTTGAGGAGAGAGATCTGCATC 59.109 47.826 0.00 0.00 0.00 3.91
2326 2909 3.309600 TGAGGAGAGAGATCTGCATCA 57.690 47.619 0.00 0.00 0.00 3.07
2327 2910 3.847081 TGAGGAGAGAGATCTGCATCAT 58.153 45.455 0.00 0.00 0.00 2.45
2328 2911 3.827876 TGAGGAGAGAGATCTGCATCATC 59.172 47.826 0.00 2.70 0.00 2.92
2329 2912 3.167485 AGGAGAGAGATCTGCATCATCC 58.833 50.000 0.00 5.07 0.00 3.51
2330 2913 3.167485 GGAGAGAGATCTGCATCATCCT 58.833 50.000 0.00 0.00 0.00 3.24
2331 2914 3.579586 GGAGAGAGATCTGCATCATCCTT 59.420 47.826 0.00 0.00 0.00 3.36
2332 2915 4.561938 GGAGAGAGATCTGCATCATCCTTG 60.562 50.000 0.00 0.00 0.00 3.61
2333 2916 3.068560 GAGAGATCTGCATCATCCTTGC 58.931 50.000 0.00 0.00 40.55 4.01
2334 2917 2.152830 GAGATCTGCATCATCCTTGCC 58.847 52.381 0.00 0.00 39.39 4.52
2335 2918 1.493446 AGATCTGCATCATCCTTGCCA 59.507 47.619 0.00 0.00 39.39 4.92
2336 2919 2.092049 AGATCTGCATCATCCTTGCCAA 60.092 45.455 0.00 0.00 39.39 4.52
2337 2920 2.447408 TCTGCATCATCCTTGCCAAT 57.553 45.000 0.00 0.00 39.39 3.16
2338 2921 2.304092 TCTGCATCATCCTTGCCAATC 58.696 47.619 0.00 0.00 39.39 2.67
2339 2922 1.340248 CTGCATCATCCTTGCCAATCC 59.660 52.381 0.00 0.00 39.39 3.01
2340 2923 0.313043 GCATCATCCTTGCCAATCCG 59.687 55.000 0.00 0.00 33.95 4.18
2341 2924 1.971481 CATCATCCTTGCCAATCCGA 58.029 50.000 0.00 0.00 0.00 4.55
2342 2925 1.605710 CATCATCCTTGCCAATCCGAC 59.394 52.381 0.00 0.00 0.00 4.79
2343 2926 0.617935 TCATCCTTGCCAATCCGACA 59.382 50.000 0.00 0.00 0.00 4.35
2344 2927 1.212688 TCATCCTTGCCAATCCGACAT 59.787 47.619 0.00 0.00 0.00 3.06
2345 2928 1.605710 CATCCTTGCCAATCCGACATC 59.394 52.381 0.00 0.00 0.00 3.06
2346 2929 0.107214 TCCTTGCCAATCCGACATCC 60.107 55.000 0.00 0.00 0.00 3.51
2347 2930 1.439353 CCTTGCCAATCCGACATCCG 61.439 60.000 0.00 0.00 38.18 4.18
2348 2931 0.744414 CTTGCCAATCCGACATCCGT 60.744 55.000 0.00 0.00 36.31 4.69
2349 2932 0.742990 TTGCCAATCCGACATCCGTC 60.743 55.000 0.00 0.00 38.91 4.79
2357 2940 4.164252 GACATCCGTCGACACCAC 57.836 61.111 17.16 0.00 31.07 4.16
2358 2941 1.445582 GACATCCGTCGACACCACC 60.446 63.158 17.16 0.00 31.07 4.61
2359 2942 2.149803 GACATCCGTCGACACCACCA 62.150 60.000 17.16 0.00 31.07 4.17
2360 2943 1.736645 CATCCGTCGACACCACCAC 60.737 63.158 17.16 0.00 0.00 4.16
2361 2944 3.277211 ATCCGTCGACACCACCACG 62.277 63.158 17.16 0.00 0.00 4.94
2392 2975 3.900892 CCATCGCCCTACGCTCGT 61.901 66.667 0.00 0.00 43.23 4.18
2393 2976 2.353607 CATCGCCCTACGCTCGTC 60.354 66.667 0.00 0.00 43.23 4.20
2394 2977 2.516460 ATCGCCCTACGCTCGTCT 60.516 61.111 0.00 0.00 43.23 4.18
2395 2978 2.835705 ATCGCCCTACGCTCGTCTG 61.836 63.158 0.00 0.00 43.23 3.51
2396 2979 3.812019 CGCCCTACGCTCGTCTGT 61.812 66.667 0.00 0.00 34.21 3.41
2397 2980 2.102553 GCCCTACGCTCGTCTGTC 59.897 66.667 0.00 0.00 0.00 3.51
2398 2981 2.799371 CCCTACGCTCGTCTGTCC 59.201 66.667 0.00 0.00 0.00 4.02
2399 2982 2.044555 CCCTACGCTCGTCTGTCCA 61.045 63.158 0.00 0.00 0.00 4.02
2400 2983 1.429825 CCTACGCTCGTCTGTCCAG 59.570 63.158 0.00 0.00 0.00 3.86
2401 2984 1.025113 CCTACGCTCGTCTGTCCAGA 61.025 60.000 0.00 0.00 34.56 3.86
2402 2985 1.018148 CTACGCTCGTCTGTCCAGAT 58.982 55.000 0.00 0.00 39.97 2.90
2403 2986 0.733150 TACGCTCGTCTGTCCAGATG 59.267 55.000 9.74 9.74 43.94 2.90
2404 2987 1.875813 CGCTCGTCTGTCCAGATGC 60.876 63.158 10.94 9.68 42.66 3.91
2405 2988 1.875813 GCTCGTCTGTCCAGATGCG 60.876 63.158 10.94 6.85 42.66 4.73
2406 2989 1.803289 CTCGTCTGTCCAGATGCGA 59.197 57.895 10.94 9.86 42.66 5.10
2407 2990 0.171231 CTCGTCTGTCCAGATGCGAA 59.829 55.000 10.94 0.00 42.66 4.70
2408 2991 0.171231 TCGTCTGTCCAGATGCGAAG 59.829 55.000 10.94 0.00 42.66 3.79
2409 2992 0.171231 CGTCTGTCCAGATGCGAAGA 59.829 55.000 3.71 0.00 39.97 2.87
2410 2993 1.634702 GTCTGTCCAGATGCGAAGAC 58.365 55.000 0.00 0.00 39.97 3.01
2411 2994 1.203523 GTCTGTCCAGATGCGAAGACT 59.796 52.381 0.00 0.00 39.97 3.24
2412 2995 1.474478 TCTGTCCAGATGCGAAGACTC 59.526 52.381 0.00 0.00 31.41 3.36
2413 2996 1.476085 CTGTCCAGATGCGAAGACTCT 59.524 52.381 0.00 0.00 0.00 3.24
2414 2997 1.203287 TGTCCAGATGCGAAGACTCTG 59.797 52.381 0.00 0.00 37.34 3.35
2415 2998 3.359194 CCAGATGCGAAGACTCTGG 57.641 57.895 0.00 0.00 46.09 3.86
2417 3000 2.662006 CAGATGCGAAGACTCTGGAA 57.338 50.000 0.00 0.00 35.07 3.53
2418 3001 2.538437 CAGATGCGAAGACTCTGGAAG 58.462 52.381 0.00 0.00 35.07 3.46
2419 3002 2.165234 CAGATGCGAAGACTCTGGAAGA 59.835 50.000 0.00 0.00 43.69 2.87
2420 3003 3.030291 AGATGCGAAGACTCTGGAAGAT 58.970 45.455 0.00 0.00 45.62 2.40
2421 3004 4.037327 CAGATGCGAAGACTCTGGAAGATA 59.963 45.833 0.00 0.00 45.62 1.98
2422 3005 4.646945 AGATGCGAAGACTCTGGAAGATAA 59.353 41.667 0.00 0.00 45.62 1.75
2423 3006 4.377839 TGCGAAGACTCTGGAAGATAAG 57.622 45.455 0.00 0.00 45.62 1.73
2424 3007 3.764434 TGCGAAGACTCTGGAAGATAAGT 59.236 43.478 0.00 0.00 45.62 2.24
2425 3008 4.142359 TGCGAAGACTCTGGAAGATAAGTC 60.142 45.833 0.00 0.00 45.62 3.01
2426 3009 4.593157 CGAAGACTCTGGAAGATAAGTCG 58.407 47.826 0.00 0.00 45.62 4.18
2427 3010 4.095185 CGAAGACTCTGGAAGATAAGTCGT 59.905 45.833 0.00 0.00 45.62 4.34
2428 3011 4.974368 AGACTCTGGAAGATAAGTCGTG 57.026 45.455 0.00 0.00 45.62 4.35
2429 3012 3.129638 AGACTCTGGAAGATAAGTCGTGC 59.870 47.826 0.00 0.00 45.62 5.34
2430 3013 2.159366 ACTCTGGAAGATAAGTCGTGCG 60.159 50.000 0.00 0.00 45.62 5.34
2431 3014 1.816835 TCTGGAAGATAAGTCGTGCGT 59.183 47.619 0.00 0.00 38.67 5.24
2432 3015 3.011818 TCTGGAAGATAAGTCGTGCGTA 58.988 45.455 0.00 0.00 38.67 4.42
2433 3016 3.064958 TCTGGAAGATAAGTCGTGCGTAG 59.935 47.826 0.00 0.00 38.67 3.51
2446 3029 2.031919 CGTAGCACCTGCCAACCA 59.968 61.111 0.00 0.00 43.38 3.67
2447 3030 1.377202 CGTAGCACCTGCCAACCAT 60.377 57.895 0.00 0.00 43.38 3.55
2448 3031 1.647545 CGTAGCACCTGCCAACCATG 61.648 60.000 0.00 0.00 43.38 3.66
2449 3032 1.678635 TAGCACCTGCCAACCATGC 60.679 57.895 0.00 0.00 43.38 4.06
2450 3033 2.423382 TAGCACCTGCCAACCATGCA 62.423 55.000 0.00 0.00 43.38 3.96
2451 3034 2.652095 GCACCTGCCAACCATGCAT 61.652 57.895 0.00 0.00 38.22 3.96
2452 3035 1.216977 CACCTGCCAACCATGCATG 59.783 57.895 20.19 20.19 38.22 4.06
2453 3036 1.077086 ACCTGCCAACCATGCATGA 59.923 52.632 28.31 5.78 38.22 3.07
2454 3037 1.252904 ACCTGCCAACCATGCATGAC 61.253 55.000 28.31 11.69 38.22 3.06
2455 3038 0.968901 CCTGCCAACCATGCATGACT 60.969 55.000 28.31 11.34 38.22 3.41
2456 3039 0.454600 CTGCCAACCATGCATGACTC 59.545 55.000 28.31 11.90 38.22 3.36
2457 3040 1.307355 TGCCAACCATGCATGACTCG 61.307 55.000 28.31 13.38 32.85 4.18
2458 3041 1.996786 GCCAACCATGCATGACTCGG 61.997 60.000 28.31 20.90 0.00 4.63
2459 3042 1.430632 CAACCATGCATGACTCGGC 59.569 57.895 28.31 0.00 0.00 5.54
2460 3043 2.108514 AACCATGCATGACTCGGCG 61.109 57.895 28.31 11.52 0.00 6.46
2461 3044 2.512286 CCATGCATGACTCGGCGT 60.512 61.111 28.31 0.00 0.00 5.68
2462 3045 1.227234 CCATGCATGACTCGGCGTA 60.227 57.895 28.31 0.00 0.00 4.42
2463 3046 1.217585 CCATGCATGACTCGGCGTAG 61.218 60.000 28.31 5.77 0.00 3.51
2477 3060 4.814294 GTAGCACCCGTCGGCCAG 62.814 72.222 5.50 0.00 0.00 4.85
2484 3067 4.552365 CCGTCGGCCAGGCATGAT 62.552 66.667 15.19 0.00 0.00 2.45
2485 3068 2.514592 CGTCGGCCAGGCATGATT 60.515 61.111 15.19 0.00 0.00 2.57
2486 3069 2.114670 CGTCGGCCAGGCATGATTT 61.115 57.895 15.19 0.00 0.00 2.17
2487 3070 1.434696 GTCGGCCAGGCATGATTTG 59.565 57.895 15.19 0.00 0.00 2.32
2488 3071 1.031571 GTCGGCCAGGCATGATTTGA 61.032 55.000 15.19 0.00 0.00 2.69
2489 3072 1.031571 TCGGCCAGGCATGATTTGAC 61.032 55.000 15.19 0.00 0.00 3.18
2490 3073 1.314534 CGGCCAGGCATGATTTGACA 61.315 55.000 15.19 0.00 34.87 3.58
2491 3074 0.458669 GGCCAGGCATGATTTGACAG 59.541 55.000 15.19 0.00 34.87 3.51
2492 3075 0.179119 GCCAGGCATGATTTGACAGC 60.179 55.000 6.55 0.00 34.87 4.40
2493 3076 1.471119 CCAGGCATGATTTGACAGCT 58.529 50.000 0.00 0.00 34.87 4.24
2494 3077 1.404391 CCAGGCATGATTTGACAGCTC 59.596 52.381 0.00 0.00 34.87 4.09
2495 3078 1.404391 CAGGCATGATTTGACAGCTCC 59.596 52.381 0.00 0.00 34.87 4.70
2496 3079 1.005097 AGGCATGATTTGACAGCTCCA 59.995 47.619 0.00 0.00 34.87 3.86
2497 3080 1.133790 GGCATGATTTGACAGCTCCAC 59.866 52.381 0.00 0.00 31.51 4.02
2498 3081 2.089980 GCATGATTTGACAGCTCCACT 58.910 47.619 0.00 0.00 0.00 4.00
2507 3090 2.977178 AGCTCCACTGAAGCTCCG 59.023 61.111 0.00 0.00 32.98 4.63
2508 3091 1.910772 AGCTCCACTGAAGCTCCGT 60.911 57.895 0.00 0.00 32.98 4.69
2509 3092 1.739562 GCTCCACTGAAGCTCCGTG 60.740 63.158 0.00 0.00 0.00 4.94
2510 3093 1.739562 CTCCACTGAAGCTCCGTGC 60.740 63.158 0.00 0.00 43.29 5.34
2511 3094 2.031012 CCACTGAAGCTCCGTGCA 59.969 61.111 0.00 0.00 45.94 4.57
2512 3095 1.597854 CCACTGAAGCTCCGTGCAA 60.598 57.895 0.00 0.00 45.94 4.08
2513 3096 1.572085 CCACTGAAGCTCCGTGCAAG 61.572 60.000 0.00 0.00 45.94 4.01
2514 3097 0.601046 CACTGAAGCTCCGTGCAAGA 60.601 55.000 0.00 0.00 45.94 3.02
2515 3098 0.601311 ACTGAAGCTCCGTGCAAGAC 60.601 55.000 0.00 0.00 45.94 3.01
2524 3107 3.044305 GTGCAAGACGAAGCCGCT 61.044 61.111 0.00 0.00 39.95 5.52
2525 3108 2.738521 TGCAAGACGAAGCCGCTC 60.739 61.111 0.00 0.00 39.95 5.03
2526 3109 3.491652 GCAAGACGAAGCCGCTCC 61.492 66.667 0.00 0.00 39.95 4.70
2527 3110 2.048222 CAAGACGAAGCCGCTCCA 60.048 61.111 0.00 0.00 39.95 3.86
2528 3111 2.048127 AAGACGAAGCCGCTCCAC 60.048 61.111 0.00 0.00 39.95 4.02
2529 3112 3.591254 AAGACGAAGCCGCTCCACC 62.591 63.158 0.00 0.00 39.95 4.61
2530 3113 4.070552 GACGAAGCCGCTCCACCT 62.071 66.667 0.00 0.00 39.95 4.00
2531 3114 3.991536 GACGAAGCCGCTCCACCTC 62.992 68.421 0.00 0.00 39.95 3.85
2532 3115 4.821589 CGAAGCCGCTCCACCTCC 62.822 72.222 0.00 0.00 0.00 4.30
2533 3116 3.394836 GAAGCCGCTCCACCTCCT 61.395 66.667 0.00 0.00 0.00 3.69
2534 3117 3.672295 GAAGCCGCTCCACCTCCTG 62.672 68.421 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.846248 CTCTCCTTTTTGTCGAATCAATAAATT 57.154 29.630 0.00 0.00 0.00 1.82
70 71 3.864789 AACTTCTCAGGTGTGGTTGAT 57.135 42.857 0.00 0.00 0.00 2.57
308 309 6.828502 TTACTCTGCATATTAGCTTTGACG 57.171 37.500 0.00 0.00 34.99 4.35
339 340 2.436911 TCATGCTATGTGATGCCTCTGT 59.563 45.455 0.00 0.00 0.00 3.41
392 393 6.532365 TTGGCAAATTTCGATTTAAACACC 57.468 33.333 0.00 0.00 0.00 4.16
395 396 9.316859 CTCAATTTGGCAAATTTCGATTTAAAC 57.683 29.630 30.19 0.00 38.97 2.01
404 405 5.988561 TGTACACCTCAATTTGGCAAATTTC 59.011 36.000 30.19 15.34 38.97 2.17
457 458 3.882102 TTGATCAACATAGGGGATGGG 57.118 47.619 3.38 0.00 40.18 4.00
552 553 9.765795 GGTAATTGAGTAGCTTAATCATGTAGT 57.234 33.333 0.00 0.00 32.37 2.73
613 614 1.202557 TCGCTTTTTCCACGTACAGGT 60.203 47.619 0.00 0.00 0.00 4.00
631 632 6.978080 CCACCCATATTTTTAGTCCAAAATCG 59.022 38.462 0.00 0.00 37.50 3.34
660 662 5.045215 ACACTTGAACATGTGCTTTCATTG 58.955 37.500 16.79 5.78 39.30 2.82
668 670 6.639671 TTGTTTTAACACTTGAACATGTGC 57.360 33.333 16.79 0.00 38.92 4.57
697 699 9.956720 CTGTGATCAGTTCTAAGAAACAAAATT 57.043 29.630 0.00 0.00 36.97 1.82
698 700 8.078596 GCTGTGATCAGTTCTAAGAAACAAAAT 58.921 33.333 0.00 0.00 43.05 1.82
740 742 1.817099 CAGAACGCAGGGATCTGGC 60.817 63.158 14.94 0.00 41.19 4.85
824 828 4.147322 GTGCGCACCGTTGGATCG 62.147 66.667 30.12 0.00 0.00 3.69
834 838 3.649986 GTGACAGGGTGTGCGCAC 61.650 66.667 33.11 33.11 44.53 5.34
839 843 3.589654 ATCCGCGTGACAGGGTGTG 62.590 63.158 4.92 0.00 0.00 3.82
840 844 3.296709 GATCCGCGTGACAGGGTGT 62.297 63.158 4.92 0.00 0.00 4.16
841 845 2.509336 GATCCGCGTGACAGGGTG 60.509 66.667 4.92 0.00 0.00 4.61
915 977 0.250467 GCTCTGAGCTTGTGGGTTGA 60.250 55.000 21.93 0.00 38.45 3.18
980 1089 0.247736 CTTGCTTGCTACCTCTCCGT 59.752 55.000 0.00 0.00 0.00 4.69
1188 1307 2.264794 CAAGAACGGACGGGGAGG 59.735 66.667 0.00 0.00 0.00 4.30
1199 1319 1.578206 GAACAGGAGCGGGCAAGAAC 61.578 60.000 0.00 0.00 0.00 3.01
1503 1662 1.677552 GGCCGTCTTCTTCTTGGGA 59.322 57.895 0.00 0.00 0.00 4.37
1518 1677 3.682292 CTACTCCTTGGTGGCGGCC 62.682 68.421 13.32 13.32 35.26 6.13
1544 1703 4.281435 GGAACTAAGGGTCAGATAGGCTAC 59.719 50.000 0.00 0.00 0.00 3.58
1588 1756 6.015519 CACAGGATCCAATAAACCAAAAGTCA 60.016 38.462 15.82 0.00 0.00 3.41
1600 1768 5.754782 AGCATTTACACACAGGATCCAATA 58.245 37.500 15.82 0.00 0.00 1.90
1613 1781 4.567159 GCCACTACAGACTAGCATTTACAC 59.433 45.833 0.00 0.00 0.00 2.90
1638 1808 5.795441 GGCTTGTTCATCGAACTAATGAAAC 59.205 40.000 8.23 0.00 42.92 2.78
1693 1863 1.202818 GGTTCAGTTTGGAGACCAGCT 60.203 52.381 0.00 0.00 33.81 4.24
1694 1864 1.239347 GGTTCAGTTTGGAGACCAGC 58.761 55.000 0.00 0.00 33.81 4.85
1695 1865 2.638480 TGGTTCAGTTTGGAGACCAG 57.362 50.000 0.00 0.00 33.81 4.00
1696 1866 2.488891 CCATGGTTCAGTTTGGAGACCA 60.489 50.000 2.57 0.00 0.00 4.02
1697 1867 2.162681 CCATGGTTCAGTTTGGAGACC 58.837 52.381 2.57 0.00 0.00 3.85
1700 1870 4.848357 ACTATCCATGGTTCAGTTTGGAG 58.152 43.478 12.58 0.00 41.33 3.86
1701 1871 4.288366 TGACTATCCATGGTTCAGTTTGGA 59.712 41.667 12.58 0.00 42.18 3.53
1702 1872 4.588899 TGACTATCCATGGTTCAGTTTGG 58.411 43.478 12.58 0.00 0.00 3.28
1703 1873 5.491070 TCTGACTATCCATGGTTCAGTTTG 58.509 41.667 23.00 15.66 0.00 2.93
1704 1874 5.762179 TCTGACTATCCATGGTTCAGTTT 57.238 39.130 23.00 4.86 0.00 2.66
1705 1875 5.965033 ATCTGACTATCCATGGTTCAGTT 57.035 39.130 23.00 16.96 0.00 3.16
1706 1876 7.094162 CGTATATCTGACTATCCATGGTTCAGT 60.094 40.741 23.00 18.78 0.00 3.41
1709 1879 7.159322 ACGTATATCTGACTATCCATGGTTC 57.841 40.000 12.58 5.14 0.00 3.62
1713 2253 7.304919 ACGTACGTATATCTGACTATCCATG 57.695 40.000 21.41 0.00 0.00 3.66
1714 2254 8.877779 GTTACGTACGTATATCTGACTATCCAT 58.122 37.037 27.30 0.00 0.00 3.41
1728 2268 6.257630 AGTTTTGTGGTTTGTTACGTACGTAT 59.742 34.615 27.30 6.27 0.00 3.06
1729 2269 5.578727 AGTTTTGTGGTTTGTTACGTACGTA 59.421 36.000 23.60 23.60 0.00 3.57
1730 2270 4.391523 AGTTTTGTGGTTTGTTACGTACGT 59.608 37.500 25.98 25.98 0.00 3.57
1731 2271 4.724807 CAGTTTTGTGGTTTGTTACGTACG 59.275 41.667 15.01 15.01 0.00 3.67
1732 2272 5.867166 TCAGTTTTGTGGTTTGTTACGTAC 58.133 37.500 0.00 0.00 0.00 3.67
1733 2273 6.492007 TTCAGTTTTGTGGTTTGTTACGTA 57.508 33.333 0.00 0.00 0.00 3.57
1734 2274 5.373981 TTCAGTTTTGTGGTTTGTTACGT 57.626 34.783 0.00 0.00 0.00 3.57
1735 2275 6.692232 TTTTCAGTTTTGTGGTTTGTTACG 57.308 33.333 0.00 0.00 0.00 3.18
1736 2276 8.007152 CAGTTTTTCAGTTTTGTGGTTTGTTAC 58.993 33.333 0.00 0.00 0.00 2.50
1737 2277 7.926555 TCAGTTTTTCAGTTTTGTGGTTTGTTA 59.073 29.630 0.00 0.00 0.00 2.41
1738 2278 6.763610 TCAGTTTTTCAGTTTTGTGGTTTGTT 59.236 30.769 0.00 0.00 0.00 2.83
1739 2279 6.201997 GTCAGTTTTTCAGTTTTGTGGTTTGT 59.798 34.615 0.00 0.00 0.00 2.83
1763 2303 5.185056 GCACATAAATAAGACCCTGTTTGGT 59.815 40.000 0.00 0.00 42.79 3.67
1764 2304 5.394115 GGCACATAAATAAGACCCTGTTTGG 60.394 44.000 0.00 0.00 0.00 3.28
1766 2306 5.185056 GTGGCACATAAATAAGACCCTGTTT 59.815 40.000 13.86 0.00 44.52 2.83
1767 2307 4.705023 GTGGCACATAAATAAGACCCTGTT 59.295 41.667 13.86 0.00 44.52 3.16
1768 2308 4.018415 AGTGGCACATAAATAAGACCCTGT 60.018 41.667 21.41 0.00 44.52 4.00
1769 2309 4.336433 CAGTGGCACATAAATAAGACCCTG 59.664 45.833 21.41 0.00 44.52 4.45
1773 2334 4.941263 TGGTCAGTGGCACATAAATAAGAC 59.059 41.667 21.41 12.66 44.52 3.01
1777 2338 5.073428 TGTTTGGTCAGTGGCACATAAATA 58.927 37.500 21.41 8.54 44.52 1.40
1801 2362 6.488006 TGTATTAATGTACGGAGAGAGTACCC 59.512 42.308 0.00 0.00 42.63 3.69
1825 2386 5.047847 TCCACAAGTCTAAAGAACGTCTTG 58.952 41.667 7.56 7.56 36.71 3.02
1843 2404 5.048083 GTCAGTCCAAAATTAGCATTCCACA 60.048 40.000 0.00 0.00 0.00 4.17
1945 2525 4.265073 CCCTCCTAGGACAAACATTCTTG 58.735 47.826 7.62 0.00 37.67 3.02
1948 2528 2.644676 GCCCTCCTAGGACAAACATTC 58.355 52.381 7.62 0.00 37.67 2.67
1956 2536 1.141858 CAATCTTGGCCCTCCTAGGAC 59.858 57.143 7.62 0.00 37.67 3.85
1957 2537 1.511613 CAATCTTGGCCCTCCTAGGA 58.488 55.000 11.98 11.98 37.67 2.94
1960 2540 0.548031 CAGCAATCTTGGCCCTCCTA 59.452 55.000 0.00 0.00 0.00 2.94
1972 2552 8.276252 TCAACTTAGTTATTTACCCAGCAATC 57.724 34.615 0.00 0.00 0.00 2.67
2145 2728 4.993029 GTGAGAGCACTCTACATTACCT 57.007 45.455 12.54 0.00 42.99 3.08
2157 2740 2.324541 AGATATGGGGAGTGAGAGCAC 58.675 52.381 0.00 0.00 45.49 4.40
2158 2741 2.783379 AGATATGGGGAGTGAGAGCA 57.217 50.000 0.00 0.00 0.00 4.26
2159 2742 5.071115 AGTTTTAGATATGGGGAGTGAGAGC 59.929 44.000 0.00 0.00 0.00 4.09
2160 2743 6.463614 CCAGTTTTAGATATGGGGAGTGAGAG 60.464 46.154 0.00 0.00 0.00 3.20
2161 2744 5.366768 CCAGTTTTAGATATGGGGAGTGAGA 59.633 44.000 0.00 0.00 0.00 3.27
2162 2745 5.131142 ACCAGTTTTAGATATGGGGAGTGAG 59.869 44.000 0.00 0.00 37.13 3.51
2163 2746 5.036916 ACCAGTTTTAGATATGGGGAGTGA 58.963 41.667 0.00 0.00 37.13 3.41
2164 2747 5.126067 CACCAGTTTTAGATATGGGGAGTG 58.874 45.833 0.00 0.00 38.59 3.51
2165 2748 4.788617 ACACCAGTTTTAGATATGGGGAGT 59.211 41.667 0.00 0.00 38.59 3.85
2166 2749 5.368989 GACACCAGTTTTAGATATGGGGAG 58.631 45.833 0.00 0.00 38.59 4.30
2167 2750 4.141801 CGACACCAGTTTTAGATATGGGGA 60.142 45.833 0.00 0.00 38.59 4.81
2168 2751 4.127171 CGACACCAGTTTTAGATATGGGG 58.873 47.826 0.00 0.00 42.20 4.96
2169 2752 4.766375 ACGACACCAGTTTTAGATATGGG 58.234 43.478 0.00 0.00 37.13 4.00
2170 2753 5.447279 GCAACGACACCAGTTTTAGATATGG 60.447 44.000 0.00 0.00 38.83 2.74
2171 2754 5.447279 GGCAACGACACCAGTTTTAGATATG 60.447 44.000 0.00 0.00 0.00 1.78
2172 2755 4.634443 GGCAACGACACCAGTTTTAGATAT 59.366 41.667 0.00 0.00 0.00 1.63
2173 2756 3.998341 GGCAACGACACCAGTTTTAGATA 59.002 43.478 0.00 0.00 0.00 1.98
2174 2757 2.812011 GGCAACGACACCAGTTTTAGAT 59.188 45.455 0.00 0.00 0.00 1.98
2175 2758 2.215196 GGCAACGACACCAGTTTTAGA 58.785 47.619 0.00 0.00 0.00 2.10
2176 2759 1.944024 TGGCAACGACACCAGTTTTAG 59.056 47.619 0.00 0.00 42.51 1.85
2177 2760 2.039818 TGGCAACGACACCAGTTTTA 57.960 45.000 0.00 0.00 42.51 1.52
2178 2761 1.178276 TTGGCAACGACACCAGTTTT 58.822 45.000 0.00 0.00 37.24 2.43
2179 2762 1.336755 GATTGGCAACGACACCAGTTT 59.663 47.619 0.00 0.00 37.24 2.66
2180 2763 0.951558 GATTGGCAACGACACCAGTT 59.048 50.000 0.00 0.00 37.24 3.16
2181 2764 0.889186 GGATTGGCAACGACACCAGT 60.889 55.000 0.00 0.00 37.24 4.00
2182 2765 0.888736 TGGATTGGCAACGACACCAG 60.889 55.000 0.00 0.00 37.24 4.00
2183 2766 0.251121 ATGGATTGGCAACGACACCA 60.251 50.000 0.00 8.12 41.81 4.17
2184 2767 0.887933 AATGGATTGGCAACGACACC 59.112 50.000 0.00 2.31 42.51 4.16
2185 2768 1.539388 TGAATGGATTGGCAACGACAC 59.461 47.619 0.00 0.00 42.51 3.67
2186 2769 1.539388 GTGAATGGATTGGCAACGACA 59.461 47.619 0.00 2.07 42.51 4.35
2187 2770 1.539388 TGTGAATGGATTGGCAACGAC 59.461 47.619 0.00 0.00 42.51 4.34
2188 2771 1.902938 TGTGAATGGATTGGCAACGA 58.097 45.000 0.00 0.00 42.51 3.85
2189 2772 2.945447 ATGTGAATGGATTGGCAACG 57.055 45.000 0.00 0.00 42.51 4.10
2190 2773 4.104776 CGTTATGTGAATGGATTGGCAAC 58.895 43.478 0.00 0.00 0.00 4.17
2191 2774 3.761218 ACGTTATGTGAATGGATTGGCAA 59.239 39.130 0.68 0.68 0.00 4.52
2192 2775 3.351740 ACGTTATGTGAATGGATTGGCA 58.648 40.909 0.00 0.00 0.00 4.92
2193 2776 5.614668 CGATACGTTATGTGAATGGATTGGC 60.615 44.000 0.00 0.00 0.00 4.52
2194 2777 5.107104 CCGATACGTTATGTGAATGGATTGG 60.107 44.000 0.00 0.00 0.00 3.16
2195 2778 5.694458 TCCGATACGTTATGTGAATGGATTG 59.306 40.000 0.00 0.00 0.00 2.67
2196 2779 5.849510 TCCGATACGTTATGTGAATGGATT 58.150 37.500 0.00 0.00 0.00 3.01
2197 2780 5.462530 TCCGATACGTTATGTGAATGGAT 57.537 39.130 0.00 0.00 0.00 3.41
2198 2781 4.922471 TCCGATACGTTATGTGAATGGA 57.078 40.909 0.00 0.00 0.00 3.41
2199 2782 4.210537 GGTTCCGATACGTTATGTGAATGG 59.789 45.833 0.00 0.00 0.00 3.16
2200 2783 4.806775 TGGTTCCGATACGTTATGTGAATG 59.193 41.667 0.00 0.00 0.00 2.67
2201 2784 5.013568 TGGTTCCGATACGTTATGTGAAT 57.986 39.130 0.00 0.00 0.00 2.57
2202 2785 4.453177 TGGTTCCGATACGTTATGTGAA 57.547 40.909 0.00 0.00 0.00 3.18
2203 2786 4.175516 GTTGGTTCCGATACGTTATGTGA 58.824 43.478 0.00 0.00 0.00 3.58
2204 2787 3.927758 TGTTGGTTCCGATACGTTATGTG 59.072 43.478 0.00 0.00 0.00 3.21
2205 2788 4.191033 TGTTGGTTCCGATACGTTATGT 57.809 40.909 0.00 0.00 0.00 2.29
2206 2789 4.201744 GGTTGTTGGTTCCGATACGTTATG 60.202 45.833 0.00 0.00 0.00 1.90
2207 2790 3.934579 GGTTGTTGGTTCCGATACGTTAT 59.065 43.478 0.00 0.00 0.00 1.89
2208 2791 3.244009 TGGTTGTTGGTTCCGATACGTTA 60.244 43.478 0.00 0.00 0.00 3.18
2209 2792 2.145536 GGTTGTTGGTTCCGATACGTT 58.854 47.619 0.00 0.00 0.00 3.99
2210 2793 1.070445 TGGTTGTTGGTTCCGATACGT 59.930 47.619 0.00 0.00 0.00 3.57
2211 2794 1.730064 CTGGTTGTTGGTTCCGATACG 59.270 52.381 0.00 0.00 0.00 3.06
2212 2795 2.482721 CACTGGTTGTTGGTTCCGATAC 59.517 50.000 0.00 0.00 0.00 2.24
2213 2796 2.773487 CACTGGTTGTTGGTTCCGATA 58.227 47.619 0.00 0.00 0.00 2.92
2214 2797 1.604604 CACTGGTTGTTGGTTCCGAT 58.395 50.000 0.00 0.00 0.00 4.18
2215 2798 1.098712 GCACTGGTTGTTGGTTCCGA 61.099 55.000 0.00 0.00 0.00 4.55
2216 2799 1.358759 GCACTGGTTGTTGGTTCCG 59.641 57.895 0.00 0.00 0.00 4.30
2217 2800 0.385390 CTGCACTGGTTGTTGGTTCC 59.615 55.000 0.00 0.00 0.00 3.62
2218 2801 0.249031 GCTGCACTGGTTGTTGGTTC 60.249 55.000 0.00 0.00 0.00 3.62
2219 2802 0.969917 TGCTGCACTGGTTGTTGGTT 60.970 50.000 0.00 0.00 0.00 3.67
2220 2803 1.379710 TGCTGCACTGGTTGTTGGT 60.380 52.632 0.00 0.00 0.00 3.67
2221 2804 1.102809 TCTGCTGCACTGGTTGTTGG 61.103 55.000 0.00 0.00 0.00 3.77
2222 2805 0.029834 GTCTGCTGCACTGGTTGTTG 59.970 55.000 0.00 0.00 0.00 3.33
2223 2806 1.103398 GGTCTGCTGCACTGGTTGTT 61.103 55.000 0.00 0.00 0.00 2.83
2224 2807 1.526917 GGTCTGCTGCACTGGTTGT 60.527 57.895 0.00 0.00 0.00 3.32
2225 2808 0.035317 TAGGTCTGCTGCACTGGTTG 59.965 55.000 0.00 0.00 0.00 3.77
2226 2809 0.764890 TTAGGTCTGCTGCACTGGTT 59.235 50.000 0.00 0.00 0.00 3.67
2227 2810 0.764890 TTTAGGTCTGCTGCACTGGT 59.235 50.000 0.00 0.00 0.00 4.00
2228 2811 1.446907 CTTTAGGTCTGCTGCACTGG 58.553 55.000 0.00 0.00 0.00 4.00
2229 2812 0.801251 GCTTTAGGTCTGCTGCACTG 59.199 55.000 0.00 0.00 0.00 3.66
2230 2813 0.671781 CGCTTTAGGTCTGCTGCACT 60.672 55.000 0.00 0.00 0.00 4.40
2231 2814 1.790387 CGCTTTAGGTCTGCTGCAC 59.210 57.895 0.00 0.00 0.00 4.57
2232 2815 2.034879 GCGCTTTAGGTCTGCTGCA 61.035 57.895 0.00 0.88 0.00 4.41
2233 2816 2.034879 TGCGCTTTAGGTCTGCTGC 61.035 57.895 9.73 0.00 0.00 5.25
2234 2817 0.950555 TGTGCGCTTTAGGTCTGCTG 60.951 55.000 9.73 0.00 0.00 4.41
2235 2818 0.951040 GTGTGCGCTTTAGGTCTGCT 60.951 55.000 9.73 0.00 0.00 4.24
2236 2819 1.497722 GTGTGCGCTTTAGGTCTGC 59.502 57.895 9.73 0.00 0.00 4.26
2237 2820 0.602638 TGGTGTGCGCTTTAGGTCTG 60.603 55.000 9.73 0.00 0.00 3.51
2238 2821 0.602905 GTGGTGTGCGCTTTAGGTCT 60.603 55.000 9.73 0.00 0.00 3.85
2239 2822 0.882927 TGTGGTGTGCGCTTTAGGTC 60.883 55.000 9.73 0.00 0.00 3.85
2240 2823 0.250727 ATGTGGTGTGCGCTTTAGGT 60.251 50.000 9.73 0.00 0.00 3.08
2241 2824 0.168788 CATGTGGTGTGCGCTTTAGG 59.831 55.000 9.73 0.00 0.00 2.69
2242 2825 0.454957 GCATGTGGTGTGCGCTTTAG 60.455 55.000 9.73 0.00 32.29 1.85
2243 2826 1.169034 TGCATGTGGTGTGCGCTTTA 61.169 50.000 9.73 0.00 45.37 1.85
2244 2827 2.336088 GCATGTGGTGTGCGCTTT 59.664 55.556 9.73 0.00 32.29 3.51
2245 2828 2.906388 TGCATGTGGTGTGCGCTT 60.906 55.556 9.73 0.00 45.37 4.68
2246 2829 3.663176 GTGCATGTGGTGTGCGCT 61.663 61.111 9.73 0.00 46.56 5.92
2248 2831 2.051076 GTGTGCATGTGGTGTGCG 60.051 61.111 0.00 0.00 45.37 5.34
2249 2832 0.032403 AATGTGTGCATGTGGTGTGC 59.968 50.000 0.00 0.00 42.81 4.57
2250 2833 2.512485 AAATGTGTGCATGTGGTGTG 57.488 45.000 0.00 0.00 35.15 3.82
2251 2834 3.888323 TCTAAAATGTGTGCATGTGGTGT 59.112 39.130 0.00 0.00 35.15 4.16
2252 2835 4.502171 TCTAAAATGTGTGCATGTGGTG 57.498 40.909 0.00 0.00 35.15 4.17
2253 2836 4.559300 GCTTCTAAAATGTGTGCATGTGGT 60.559 41.667 0.00 0.00 35.15 4.16
2254 2837 3.922240 GCTTCTAAAATGTGTGCATGTGG 59.078 43.478 0.00 0.00 35.15 4.17
2255 2838 3.922240 GGCTTCTAAAATGTGTGCATGTG 59.078 43.478 0.00 0.00 35.15 3.21
2256 2839 3.366273 CGGCTTCTAAAATGTGTGCATGT 60.366 43.478 0.00 0.00 35.15 3.21
2257 2840 3.173599 CGGCTTCTAAAATGTGTGCATG 58.826 45.455 0.00 0.00 35.15 4.06
2258 2841 2.415893 GCGGCTTCTAAAATGTGTGCAT 60.416 45.455 0.00 0.00 36.80 3.96
2259 2842 1.068610 GCGGCTTCTAAAATGTGTGCA 60.069 47.619 0.00 0.00 0.00 4.57
2260 2843 1.617740 GCGGCTTCTAAAATGTGTGC 58.382 50.000 0.00 0.00 0.00 4.57
2261 2844 1.539388 TGGCGGCTTCTAAAATGTGTG 59.461 47.619 11.43 0.00 0.00 3.82
2262 2845 1.904287 TGGCGGCTTCTAAAATGTGT 58.096 45.000 11.43 0.00 0.00 3.72
2263 2846 2.223572 GGATGGCGGCTTCTAAAATGTG 60.224 50.000 21.62 0.00 0.00 3.21
2264 2847 2.024414 GGATGGCGGCTTCTAAAATGT 58.976 47.619 21.62 0.00 0.00 2.71
2265 2848 2.291741 GAGGATGGCGGCTTCTAAAATG 59.708 50.000 21.62 0.00 0.00 2.32
2266 2849 2.092429 TGAGGATGGCGGCTTCTAAAAT 60.092 45.455 21.62 0.00 0.00 1.82
2267 2850 1.280710 TGAGGATGGCGGCTTCTAAAA 59.719 47.619 21.62 5.64 0.00 1.52
2268 2851 0.908910 TGAGGATGGCGGCTTCTAAA 59.091 50.000 21.62 7.18 0.00 1.85
2269 2852 1.070758 GATGAGGATGGCGGCTTCTAA 59.929 52.381 21.62 10.05 0.00 2.10
2270 2853 0.681733 GATGAGGATGGCGGCTTCTA 59.318 55.000 21.62 10.90 0.00 2.10
2271 2854 1.449353 GATGAGGATGGCGGCTTCT 59.551 57.895 21.62 11.18 0.00 2.85
2272 2855 1.958205 CGATGAGGATGGCGGCTTC 60.958 63.158 15.55 15.55 0.00 3.86
2273 2856 2.109799 CGATGAGGATGGCGGCTT 59.890 61.111 11.43 3.03 0.00 4.35
2274 2857 2.839632 TCGATGAGGATGGCGGCT 60.840 61.111 11.43 0.00 0.00 5.52
2275 2858 2.663188 GTCGATGAGGATGGCGGC 60.663 66.667 0.00 0.00 0.00 6.53
2276 2859 2.029666 GGTCGATGAGGATGGCGG 59.970 66.667 0.00 0.00 0.00 6.13
2277 2860 0.250038 AATGGTCGATGAGGATGGCG 60.250 55.000 0.00 0.00 0.00 5.69
2278 2861 1.202687 TCAATGGTCGATGAGGATGGC 60.203 52.381 0.00 0.00 0.00 4.40
2279 2862 2.487934 GTCAATGGTCGATGAGGATGG 58.512 52.381 0.00 0.00 0.00 3.51
2280 2863 2.487934 GGTCAATGGTCGATGAGGATG 58.512 52.381 0.00 0.00 0.00 3.51
2281 2864 1.417890 GGGTCAATGGTCGATGAGGAT 59.582 52.381 0.00 0.00 0.00 3.24
2282 2865 0.830648 GGGTCAATGGTCGATGAGGA 59.169 55.000 0.00 0.00 0.00 3.71
2283 2866 0.541392 TGGGTCAATGGTCGATGAGG 59.459 55.000 0.00 0.00 0.00 3.86
2284 2867 2.103771 AGATGGGTCAATGGTCGATGAG 59.896 50.000 0.00 0.00 0.00 2.90
2285 2868 2.118679 AGATGGGTCAATGGTCGATGA 58.881 47.619 0.00 0.00 0.00 2.92
2286 2869 2.615447 CAAGATGGGTCAATGGTCGATG 59.385 50.000 0.00 0.00 0.00 3.84
2287 2870 2.505407 TCAAGATGGGTCAATGGTCGAT 59.495 45.455 0.00 0.00 0.00 3.59
2288 2871 1.905894 TCAAGATGGGTCAATGGTCGA 59.094 47.619 0.00 0.00 0.00 4.20
2289 2872 2.283298 CTCAAGATGGGTCAATGGTCG 58.717 52.381 0.00 0.00 0.00 4.79
2290 2873 2.239654 TCCTCAAGATGGGTCAATGGTC 59.760 50.000 0.00 0.00 0.00 4.02
2291 2874 2.240667 CTCCTCAAGATGGGTCAATGGT 59.759 50.000 0.00 0.00 0.00 3.55
2292 2875 2.507058 TCTCCTCAAGATGGGTCAATGG 59.493 50.000 0.00 0.00 0.00 3.16
2293 2876 3.453717 TCTCTCCTCAAGATGGGTCAATG 59.546 47.826 0.00 0.00 32.19 2.82
2294 2877 3.710677 CTCTCTCCTCAAGATGGGTCAAT 59.289 47.826 0.00 0.00 32.19 2.57
2295 2878 3.102972 CTCTCTCCTCAAGATGGGTCAA 58.897 50.000 0.00 0.00 32.19 3.18
2296 2879 2.313041 TCTCTCTCCTCAAGATGGGTCA 59.687 50.000 0.00 0.00 32.19 4.02
2297 2880 3.025322 TCTCTCTCCTCAAGATGGGTC 57.975 52.381 0.00 0.00 32.19 4.46
2298 2881 3.207321 AGATCTCTCTCCTCAAGATGGGT 59.793 47.826 0.00 0.00 32.19 4.51
2299 2882 3.575256 CAGATCTCTCTCCTCAAGATGGG 59.425 52.174 0.00 0.00 32.19 4.00
2300 2883 3.006110 GCAGATCTCTCTCCTCAAGATGG 59.994 52.174 0.00 0.00 32.19 3.51
2301 2884 3.637694 TGCAGATCTCTCTCCTCAAGATG 59.362 47.826 0.00 0.00 32.19 2.90
2302 2885 3.913509 TGCAGATCTCTCTCCTCAAGAT 58.086 45.455 0.00 0.00 32.19 2.40
2303 2886 3.378861 TGCAGATCTCTCTCCTCAAGA 57.621 47.619 0.00 0.00 0.00 3.02
2304 2887 3.637694 TGATGCAGATCTCTCTCCTCAAG 59.362 47.826 0.00 0.00 0.00 3.02
2305 2888 3.639952 TGATGCAGATCTCTCTCCTCAA 58.360 45.455 0.00 0.00 0.00 3.02
2306 2889 3.309600 TGATGCAGATCTCTCTCCTCA 57.690 47.619 0.00 0.00 0.00 3.86
2307 2890 3.194116 GGATGATGCAGATCTCTCTCCTC 59.806 52.174 0.00 0.00 0.00 3.71
2308 2891 3.167485 GGATGATGCAGATCTCTCTCCT 58.833 50.000 0.00 0.00 0.00 3.69
2309 2892 3.167485 AGGATGATGCAGATCTCTCTCC 58.833 50.000 0.00 4.48 0.00 3.71
2310 2893 4.562082 CAAGGATGATGCAGATCTCTCTC 58.438 47.826 0.00 0.00 0.00 3.20
2311 2894 3.244284 GCAAGGATGATGCAGATCTCTCT 60.244 47.826 0.00 0.00 43.29 3.10
2312 2895 3.068560 GCAAGGATGATGCAGATCTCTC 58.931 50.000 0.00 0.00 43.29 3.20
2313 2896 2.224572 GGCAAGGATGATGCAGATCTCT 60.225 50.000 0.00 2.48 45.60 3.10
2314 2897 2.152830 GGCAAGGATGATGCAGATCTC 58.847 52.381 0.00 0.00 45.60 2.75
2315 2898 1.493446 TGGCAAGGATGATGCAGATCT 59.507 47.619 8.09 0.00 45.60 2.75
2316 2899 1.977056 TGGCAAGGATGATGCAGATC 58.023 50.000 0.00 0.00 45.60 2.75
2317 2900 2.447408 TTGGCAAGGATGATGCAGAT 57.553 45.000 0.00 0.00 45.60 2.90
2318 2901 2.304092 GATTGGCAAGGATGATGCAGA 58.696 47.619 5.96 0.00 45.60 4.26
2319 2902 1.340248 GGATTGGCAAGGATGATGCAG 59.660 52.381 5.96 0.00 45.60 4.41
2320 2903 1.405872 GGATTGGCAAGGATGATGCA 58.594 50.000 5.96 0.00 45.60 3.96
2321 2904 0.313043 CGGATTGGCAAGGATGATGC 59.687 55.000 5.96 0.00 43.08 3.91
2322 2905 1.605710 GTCGGATTGGCAAGGATGATG 59.394 52.381 5.96 0.00 0.00 3.07
2323 2906 1.212688 TGTCGGATTGGCAAGGATGAT 59.787 47.619 5.96 0.00 0.00 2.45
2324 2907 0.617935 TGTCGGATTGGCAAGGATGA 59.382 50.000 5.96 0.00 0.00 2.92
2325 2908 1.605710 GATGTCGGATTGGCAAGGATG 59.394 52.381 5.96 0.00 0.00 3.51
2326 2909 1.477558 GGATGTCGGATTGGCAAGGAT 60.478 52.381 5.96 0.00 0.00 3.24
2327 2910 0.107214 GGATGTCGGATTGGCAAGGA 60.107 55.000 5.96 0.00 0.00 3.36
2328 2911 1.439353 CGGATGTCGGATTGGCAAGG 61.439 60.000 5.96 0.00 34.75 3.61
2329 2912 0.744414 ACGGATGTCGGATTGGCAAG 60.744 55.000 5.96 0.00 44.45 4.01
2330 2913 0.742990 GACGGATGTCGGATTGGCAA 60.743 55.000 0.68 0.68 44.45 4.52
2331 2914 1.153449 GACGGATGTCGGATTGGCA 60.153 57.895 0.00 0.00 44.45 4.92
2332 2915 3.719214 GACGGATGTCGGATTGGC 58.281 61.111 0.00 0.00 44.45 4.52
2340 2923 1.445582 GGTGGTGTCGACGGATGTC 60.446 63.158 11.62 0.00 41.91 3.06
2341 2924 2.204461 TGGTGGTGTCGACGGATGT 61.204 57.895 11.62 0.00 0.00 3.06
2342 2925 1.736645 GTGGTGGTGTCGACGGATG 60.737 63.158 11.62 0.00 0.00 3.51
2343 2926 2.654877 GTGGTGGTGTCGACGGAT 59.345 61.111 11.62 0.00 0.00 4.18
2344 2927 3.968568 CGTGGTGGTGTCGACGGA 61.969 66.667 11.62 0.00 36.28 4.69
2380 2963 2.102553 GACAGACGAGCGTAGGGC 59.897 66.667 0.00 0.00 44.05 5.19
2381 2964 1.994507 CTGGACAGACGAGCGTAGGG 61.995 65.000 0.00 0.00 0.00 3.53
2382 2965 1.025113 TCTGGACAGACGAGCGTAGG 61.025 60.000 0.00 0.00 31.41 3.18
2383 2966 1.018148 ATCTGGACAGACGAGCGTAG 58.982 55.000 3.82 0.00 40.75 3.51
2384 2967 0.733150 CATCTGGACAGACGAGCGTA 59.267 55.000 3.82 0.00 40.75 4.42
2385 2968 1.508545 CATCTGGACAGACGAGCGT 59.491 57.895 3.82 0.00 40.75 5.07
2386 2969 1.875813 GCATCTGGACAGACGAGCG 60.876 63.158 3.82 0.00 40.75 5.03
2387 2970 1.875813 CGCATCTGGACAGACGAGC 60.876 63.158 3.82 8.37 40.75 5.03
2388 2971 0.171231 TTCGCATCTGGACAGACGAG 59.829 55.000 3.82 0.00 40.75 4.18
2389 2972 0.171231 CTTCGCATCTGGACAGACGA 59.829 55.000 3.82 7.48 40.75 4.20
2390 2973 0.171231 TCTTCGCATCTGGACAGACG 59.829 55.000 3.82 5.18 40.75 4.18
2391 2974 1.203523 AGTCTTCGCATCTGGACAGAC 59.796 52.381 3.82 0.00 40.75 3.51
2392 2975 1.474478 GAGTCTTCGCATCTGGACAGA 59.526 52.381 4.26 4.26 42.37 3.41
2393 2976 1.476085 AGAGTCTTCGCATCTGGACAG 59.524 52.381 0.00 0.00 0.00 3.51
2394 2977 1.203287 CAGAGTCTTCGCATCTGGACA 59.797 52.381 0.00 0.00 37.41 4.02
2395 2978 1.919918 CAGAGTCTTCGCATCTGGAC 58.080 55.000 0.00 0.00 37.41 4.02
2398 2981 2.165234 TCTTCCAGAGTCTTCGCATCTG 59.835 50.000 0.00 0.00 40.13 2.90
2399 2982 2.451490 TCTTCCAGAGTCTTCGCATCT 58.549 47.619 0.00 0.00 0.00 2.90
2400 2983 2.949451 TCTTCCAGAGTCTTCGCATC 57.051 50.000 0.00 0.00 0.00 3.91
2401 2984 4.404073 ACTTATCTTCCAGAGTCTTCGCAT 59.596 41.667 0.00 0.00 0.00 4.73
2402 2985 3.764434 ACTTATCTTCCAGAGTCTTCGCA 59.236 43.478 0.00 0.00 0.00 5.10
2403 2986 4.356289 GACTTATCTTCCAGAGTCTTCGC 58.644 47.826 0.00 0.00 36.47 4.70
2404 2987 4.095185 ACGACTTATCTTCCAGAGTCTTCG 59.905 45.833 0.00 0.00 37.08 3.79
2405 2988 5.336744 CACGACTTATCTTCCAGAGTCTTC 58.663 45.833 0.00 0.00 37.08 2.87
2406 2989 4.381079 GCACGACTTATCTTCCAGAGTCTT 60.381 45.833 0.00 0.00 37.08 3.01
2407 2990 3.129638 GCACGACTTATCTTCCAGAGTCT 59.870 47.826 0.00 0.00 37.08 3.24
2408 2991 3.440228 GCACGACTTATCTTCCAGAGTC 58.560 50.000 0.00 0.00 36.14 3.36
2409 2992 2.159366 CGCACGACTTATCTTCCAGAGT 60.159 50.000 0.00 0.00 0.00 3.24
2410 2993 2.159366 ACGCACGACTTATCTTCCAGAG 60.159 50.000 0.00 0.00 0.00 3.35
2411 2994 1.816835 ACGCACGACTTATCTTCCAGA 59.183 47.619 0.00 0.00 0.00 3.86
2412 2995 2.279582 ACGCACGACTTATCTTCCAG 57.720 50.000 0.00 0.00 0.00 3.86
2413 2996 2.479049 GCTACGCACGACTTATCTTCCA 60.479 50.000 0.00 0.00 0.00 3.53
2414 2997 2.117910 GCTACGCACGACTTATCTTCC 58.882 52.381 0.00 0.00 0.00 3.46
2415 2998 2.793933 TGCTACGCACGACTTATCTTC 58.206 47.619 0.00 0.00 31.71 2.87
2416 2999 2.933495 TGCTACGCACGACTTATCTT 57.067 45.000 0.00 0.00 31.71 2.40
2427 3010 2.668212 GTTGGCAGGTGCTACGCA 60.668 61.111 1.26 0.00 41.70 5.24
2428 3011 3.431725 GGTTGGCAGGTGCTACGC 61.432 66.667 1.26 0.00 41.70 4.42
2429 3012 1.377202 ATGGTTGGCAGGTGCTACG 60.377 57.895 1.26 0.00 41.70 3.51
2430 3013 1.937546 GCATGGTTGGCAGGTGCTAC 61.938 60.000 1.26 1.01 41.70 3.58
2431 3014 1.678635 GCATGGTTGGCAGGTGCTA 60.679 57.895 1.26 0.00 41.70 3.49
2432 3015 2.993264 GCATGGTTGGCAGGTGCT 60.993 61.111 1.26 0.00 41.70 4.40
2433 3016 2.652095 ATGCATGGTTGGCAGGTGC 61.652 57.895 0.00 8.05 45.68 5.01
2434 3017 1.216977 CATGCATGGTTGGCAGGTG 59.783 57.895 19.40 0.00 45.68 4.00
2435 3018 1.077086 TCATGCATGGTTGGCAGGT 59.923 52.632 25.97 0.00 45.68 4.00
2436 3019 0.968901 AGTCATGCATGGTTGGCAGG 60.969 55.000 25.97 0.00 45.68 4.85
2437 3020 0.454600 GAGTCATGCATGGTTGGCAG 59.545 55.000 25.97 0.00 45.68 4.85
2438 3021 1.307355 CGAGTCATGCATGGTTGGCA 61.307 55.000 25.97 2.92 46.66 4.92
2439 3022 1.430632 CGAGTCATGCATGGTTGGC 59.569 57.895 25.97 3.93 0.00 4.52
2440 3023 1.996786 GCCGAGTCATGCATGGTTGG 61.997 60.000 25.97 24.12 0.00 3.77
2441 3024 1.430632 GCCGAGTCATGCATGGTTG 59.569 57.895 25.97 16.50 0.00 3.77
2442 3025 2.108514 CGCCGAGTCATGCATGGTT 61.109 57.895 25.97 14.53 0.00 3.67
2443 3026 1.955495 TACGCCGAGTCATGCATGGT 61.955 55.000 25.97 15.83 0.00 3.55
2444 3027 1.217585 CTACGCCGAGTCATGCATGG 61.218 60.000 25.97 11.16 0.00 3.66
2445 3028 1.825285 GCTACGCCGAGTCATGCATG 61.825 60.000 21.07 21.07 0.00 4.06
2446 3029 1.592669 GCTACGCCGAGTCATGCAT 60.593 57.895 0.00 0.00 0.00 3.96
2447 3030 2.202743 GCTACGCCGAGTCATGCA 60.203 61.111 0.00 0.00 0.00 3.96
2448 3031 2.202743 TGCTACGCCGAGTCATGC 60.203 61.111 0.00 0.00 0.00 4.06
2449 3032 1.878522 GGTGCTACGCCGAGTCATG 60.879 63.158 0.00 0.00 0.00 3.07
2450 3033 2.494918 GGTGCTACGCCGAGTCAT 59.505 61.111 0.00 0.00 0.00 3.06
2451 3034 3.755628 GGGTGCTACGCCGAGTCA 61.756 66.667 0.00 0.00 34.37 3.41
2452 3035 4.849329 CGGGTGCTACGCCGAGTC 62.849 72.222 0.00 0.00 35.07 3.36
2454 3037 4.849329 GACGGGTGCTACGCCGAG 62.849 72.222 16.62 1.84 36.11 4.63
2460 3043 4.814294 CTGGCCGACGGGTGCTAC 62.814 72.222 17.22 0.00 34.97 3.58
2467 3050 4.552365 ATCATGCCTGGCCGACGG 62.552 66.667 17.53 10.29 0.00 4.79
2468 3051 2.114670 AAATCATGCCTGGCCGACG 61.115 57.895 17.53 1.64 0.00 5.12
2469 3052 1.031571 TCAAATCATGCCTGGCCGAC 61.032 55.000 17.53 0.00 0.00 4.79
2470 3053 1.031571 GTCAAATCATGCCTGGCCGA 61.032 55.000 17.53 13.29 0.00 5.54
2471 3054 1.314534 TGTCAAATCATGCCTGGCCG 61.315 55.000 17.53 7.60 0.00 6.13
2472 3055 0.458669 CTGTCAAATCATGCCTGGCC 59.541 55.000 17.53 0.00 0.00 5.36
2473 3056 0.179119 GCTGTCAAATCATGCCTGGC 60.179 55.000 12.87 12.87 0.00 4.85
2474 3057 1.404391 GAGCTGTCAAATCATGCCTGG 59.596 52.381 0.00 0.00 0.00 4.45
2475 3058 1.404391 GGAGCTGTCAAATCATGCCTG 59.596 52.381 0.00 0.00 0.00 4.85
2476 3059 1.005097 TGGAGCTGTCAAATCATGCCT 59.995 47.619 0.00 0.00 0.00 4.75
2477 3060 1.133790 GTGGAGCTGTCAAATCATGCC 59.866 52.381 0.00 0.00 0.00 4.40
2478 3061 2.089980 AGTGGAGCTGTCAAATCATGC 58.910 47.619 0.00 0.00 0.00 4.06
2479 3062 3.340928 TCAGTGGAGCTGTCAAATCATG 58.659 45.455 0.00 0.00 45.23 3.07
2480 3063 3.708403 TCAGTGGAGCTGTCAAATCAT 57.292 42.857 0.00 0.00 45.23 2.45
2481 3064 3.405831 CTTCAGTGGAGCTGTCAAATCA 58.594 45.455 0.00 0.00 45.23 2.57
2482 3065 2.161211 GCTTCAGTGGAGCTGTCAAATC 59.839 50.000 16.73 0.00 45.23 2.17
2483 3066 2.157738 GCTTCAGTGGAGCTGTCAAAT 58.842 47.619 16.73 0.00 45.23 2.32
2484 3067 1.141657 AGCTTCAGTGGAGCTGTCAAA 59.858 47.619 25.65 0.00 45.23 2.69
2485 3068 0.761187 AGCTTCAGTGGAGCTGTCAA 59.239 50.000 25.65 0.00 45.23 3.18
2486 3069 0.319728 GAGCTTCAGTGGAGCTGTCA 59.680 55.000 30.99 0.00 45.23 3.58
2487 3070 0.390998 GGAGCTTCAGTGGAGCTGTC 60.391 60.000 30.99 16.80 45.23 3.51
2488 3071 1.676384 GGAGCTTCAGTGGAGCTGT 59.324 57.895 30.99 7.91 45.23 4.40
2489 3072 1.447489 CGGAGCTTCAGTGGAGCTG 60.447 63.158 30.99 13.47 46.34 4.24
2490 3073 1.910772 ACGGAGCTTCAGTGGAGCT 60.911 57.895 26.52 26.52 42.13 4.09
2491 3074 1.739562 CACGGAGCTTCAGTGGAGC 60.740 63.158 16.25 16.25 38.60 4.70
2492 3075 1.739562 GCACGGAGCTTCAGTGGAG 60.740 63.158 15.66 0.00 41.75 3.86
2493 3076 2.038814 TTGCACGGAGCTTCAGTGGA 62.039 55.000 15.66 11.61 41.75 4.02
2494 3077 1.572085 CTTGCACGGAGCTTCAGTGG 61.572 60.000 15.66 0.26 41.75 4.00
2495 3078 0.601046 TCTTGCACGGAGCTTCAGTG 60.601 55.000 11.28 11.28 43.78 3.66
2496 3079 0.601311 GTCTTGCACGGAGCTTCAGT 60.601 55.000 0.00 0.00 45.94 3.41
2497 3080 1.621301 CGTCTTGCACGGAGCTTCAG 61.621 60.000 0.00 0.00 45.46 3.02
2498 3081 1.664649 CGTCTTGCACGGAGCTTCA 60.665 57.895 0.00 0.00 45.46 3.02
2499 3082 3.159984 CGTCTTGCACGGAGCTTC 58.840 61.111 3.79 0.00 45.46 3.86
2507 3090 3.016474 GAGCGGCTTCGTCTTGCAC 62.016 63.158 2.97 0.00 36.07 4.57
2508 3091 2.738521 GAGCGGCTTCGTCTTGCA 60.739 61.111 2.97 0.00 36.07 4.08
2509 3092 3.491652 GGAGCGGCTTCGTCTTGC 61.492 66.667 2.97 0.00 36.07 4.01
2510 3093 2.048222 TGGAGCGGCTTCGTCTTG 60.048 61.111 2.97 0.00 36.07 3.02
2511 3094 2.048127 GTGGAGCGGCTTCGTCTT 60.048 61.111 2.97 0.00 36.07 3.01
2512 3095 4.070552 GGTGGAGCGGCTTCGTCT 62.071 66.667 2.97 0.00 36.07 4.18
2513 3096 3.991536 GAGGTGGAGCGGCTTCGTC 62.992 68.421 2.97 5.91 36.07 4.20
2514 3097 4.070552 GAGGTGGAGCGGCTTCGT 62.071 66.667 2.97 0.00 36.07 3.85
2515 3098 4.821589 GGAGGTGGAGCGGCTTCG 62.822 72.222 2.97 0.00 0.00 3.79
2516 3099 3.394836 AGGAGGTGGAGCGGCTTC 61.395 66.667 2.97 1.37 0.00 3.86
2517 3100 3.710722 CAGGAGGTGGAGCGGCTT 61.711 66.667 2.97 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.