Multiple sequence alignment - TraesCS6D01G036400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G036400 chr6D 100.000 3821 0 0 1 3821 14933262 14937082 0.000000e+00 7057.0
1 TraesCS6D01G036400 chr6D 85.044 1471 194 14 1057 2524 14901355 14902802 0.000000e+00 1474.0
2 TraesCS6D01G036400 chr6D 98.596 641 9 0 115 755 14927234 14927874 0.000000e+00 1134.0
3 TraesCS6D01G036400 chr6D 88.235 102 12 0 2714 2815 14902917 14903018 5.180000e-24 122.0
4 TraesCS6D01G036400 chr6B 85.312 1491 178 22 1044 2524 26398447 26396988 0.000000e+00 1502.0
5 TraesCS6D01G036400 chr6B 81.142 1156 204 12 1157 2306 26486991 26485844 0.000000e+00 915.0
6 TraesCS6D01G036400 chr6B 80.864 972 166 12 1057 2025 26290459 26289505 0.000000e+00 747.0
7 TraesCS6D01G036400 chr6B 87.629 97 8 2 3125 3221 26396571 26396479 4.040000e-20 110.0
8 TraesCS6D01G036400 chr6B 90.476 63 6 0 2462 2524 27060387 27060449 2.450000e-12 84.2
9 TraesCS6D01G036400 chr2D 95.300 766 33 3 1 764 465190127 465190891 0.000000e+00 1212.0
10 TraesCS6D01G036400 chr5B 81.194 1441 251 20 1006 2437 458051640 458053069 0.000000e+00 1142.0
11 TraesCS6D01G036400 chr5B 90.263 760 65 8 1 754 199661111 199660355 0.000000e+00 985.0
12 TraesCS6D01G036400 chr5B 82.026 1007 174 7 1440 2443 457915139 457914137 0.000000e+00 850.0
13 TraesCS6D01G036400 chr6A 79.559 1634 303 29 1066 2683 15654998 15653380 0.000000e+00 1138.0
14 TraesCS6D01G036400 chr6A 86.198 384 29 11 3453 3817 15896344 15896722 9.950000e-106 394.0
15 TraesCS6D01G036400 chr6A 79.688 128 26 0 2462 2589 15895891 15896018 4.060000e-15 93.5
16 TraesCS6D01G036400 chr6A 89.231 65 3 3 3478 3542 15705812 15705752 1.140000e-10 78.7
17 TraesCS6D01G036400 chr6A 88.333 60 7 0 3246 3305 15904469 15904528 5.290000e-09 73.1
18 TraesCS6D01G036400 chr5A 81.674 1386 236 16 1061 2437 481937368 481938744 0.000000e+00 1136.0
19 TraesCS6D01G036400 chr5D 90.237 758 65 9 3 753 344490019 344489264 0.000000e+00 981.0
20 TraesCS6D01G036400 chr5D 82.446 826 144 1 1890 2714 27958445 27959270 0.000000e+00 721.0
21 TraesCS6D01G036400 chr7D 88.975 771 68 14 3 762 138516240 138515476 0.000000e+00 937.0
22 TraesCS6D01G036400 chr2B 89.065 759 74 9 1 753 539741536 539742291 0.000000e+00 933.0
23 TraesCS6D01G036400 chr3D 89.005 764 66 15 1 753 84242271 84243027 0.000000e+00 929.0
24 TraesCS6D01G036400 chr3D 88.845 762 75 10 1 755 125517920 125518678 0.000000e+00 928.0
25 TraesCS6D01G036400 chr3D 80.000 155 27 3 754 907 554051210 554051059 1.120000e-20 111.0
26 TraesCS6D01G036400 chr1D 88.714 762 75 8 2 754 74678360 74677601 0.000000e+00 920.0
27 TraesCS6D01G036400 chr4B 83.990 762 114 5 1451 2209 575724278 575723522 0.000000e+00 725.0
28 TraesCS6D01G036400 chr7A 76.610 885 180 23 1147 2015 9332888 9333761 2.690000e-126 462.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G036400 chr6D 14933262 14937082 3820 False 7057.00 7057 100.0000 1 3821 1 chr6D.!!$F2 3820
1 TraesCS6D01G036400 chr6D 14927234 14927874 640 False 1134.00 1134 98.5960 115 755 1 chr6D.!!$F1 640
2 TraesCS6D01G036400 chr6D 14901355 14903018 1663 False 798.00 1474 86.6395 1057 2815 2 chr6D.!!$F3 1758
3 TraesCS6D01G036400 chr6B 26485844 26486991 1147 True 915.00 915 81.1420 1157 2306 1 chr6B.!!$R2 1149
4 TraesCS6D01G036400 chr6B 26396479 26398447 1968 True 806.00 1502 86.4705 1044 3221 2 chr6B.!!$R3 2177
5 TraesCS6D01G036400 chr6B 26289505 26290459 954 True 747.00 747 80.8640 1057 2025 1 chr6B.!!$R1 968
6 TraesCS6D01G036400 chr2D 465190127 465190891 764 False 1212.00 1212 95.3000 1 764 1 chr2D.!!$F1 763
7 TraesCS6D01G036400 chr5B 458051640 458053069 1429 False 1142.00 1142 81.1940 1006 2437 1 chr5B.!!$F1 1431
8 TraesCS6D01G036400 chr5B 199660355 199661111 756 True 985.00 985 90.2630 1 754 1 chr5B.!!$R1 753
9 TraesCS6D01G036400 chr5B 457914137 457915139 1002 True 850.00 850 82.0260 1440 2443 1 chr5B.!!$R2 1003
10 TraesCS6D01G036400 chr6A 15653380 15654998 1618 True 1138.00 1138 79.5590 1066 2683 1 chr6A.!!$R1 1617
11 TraesCS6D01G036400 chr6A 15895891 15896722 831 False 243.75 394 82.9430 2462 3817 2 chr6A.!!$F2 1355
12 TraesCS6D01G036400 chr5A 481937368 481938744 1376 False 1136.00 1136 81.6740 1061 2437 1 chr5A.!!$F1 1376
13 TraesCS6D01G036400 chr5D 344489264 344490019 755 True 981.00 981 90.2370 3 753 1 chr5D.!!$R1 750
14 TraesCS6D01G036400 chr5D 27958445 27959270 825 False 721.00 721 82.4460 1890 2714 1 chr5D.!!$F1 824
15 TraesCS6D01G036400 chr7D 138515476 138516240 764 True 937.00 937 88.9750 3 762 1 chr7D.!!$R1 759
16 TraesCS6D01G036400 chr2B 539741536 539742291 755 False 933.00 933 89.0650 1 753 1 chr2B.!!$F1 752
17 TraesCS6D01G036400 chr3D 84242271 84243027 756 False 929.00 929 89.0050 1 753 1 chr3D.!!$F1 752
18 TraesCS6D01G036400 chr3D 125517920 125518678 758 False 928.00 928 88.8450 1 755 1 chr3D.!!$F2 754
19 TraesCS6D01G036400 chr1D 74677601 74678360 759 True 920.00 920 88.7140 2 754 1 chr1D.!!$R1 752
20 TraesCS6D01G036400 chr4B 575723522 575724278 756 True 725.00 725 83.9900 1451 2209 1 chr4B.!!$R1 758
21 TraesCS6D01G036400 chr7A 9332888 9333761 873 False 462.00 462 76.6100 1147 2015 1 chr7A.!!$F1 868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
816 840 0.041684 AAAAGAGCTTGGGATGGGGG 59.958 55.0 0.00 0.0 0.0 5.40 F
840 864 0.096628 CTCTCATGCTTGCGAGTTGC 59.903 55.0 10.58 0.0 46.7 4.17 F
2088 2142 0.179015 TACGGGTGCTTGCCTTTGAA 60.179 50.0 0.00 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1661 1705 0.312416 CCGAACTAGCTCATCCCTCG 59.688 60.0 0.0 0.0 0.0 4.63 R
2529 2586 0.602638 CACGCACCCACTTGAGCTTA 60.603 55.0 0.0 0.0 0.0 3.09 R
3655 3845 0.033405 AGGCGAGGAGTAGTAGGCAA 60.033 55.0 0.0 0.0 0.0 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
518 533 5.352846 GCAAGAAGAAACAATCTCTAGGGTC 59.647 44.000 0.00 0.00 37.42 4.46
661 684 3.057806 TCTTGTGTTGCGTCTCTCGATTA 60.058 43.478 0.00 0.00 42.86 1.75
756 780 2.755650 GTGACAATTCCACGACAGTCT 58.244 47.619 0.00 0.00 0.00 3.24
757 781 2.731976 GTGACAATTCCACGACAGTCTC 59.268 50.000 0.00 0.00 0.00 3.36
758 782 2.288825 TGACAATTCCACGACAGTCTCC 60.289 50.000 0.00 0.00 0.00 3.71
759 783 1.002087 ACAATTCCACGACAGTCTCCC 59.998 52.381 0.00 0.00 0.00 4.30
760 784 1.001974 CAATTCCACGACAGTCTCCCA 59.998 52.381 0.00 0.00 0.00 4.37
761 785 1.348064 ATTCCACGACAGTCTCCCAA 58.652 50.000 0.00 0.00 0.00 4.12
762 786 1.124780 TTCCACGACAGTCTCCCAAA 58.875 50.000 0.00 0.00 0.00 3.28
763 787 0.679505 TCCACGACAGTCTCCCAAAG 59.320 55.000 0.00 0.00 0.00 2.77
764 788 0.320771 CCACGACAGTCTCCCAAAGG 60.321 60.000 0.00 0.00 0.00 3.11
765 789 0.951040 CACGACAGTCTCCCAAAGGC 60.951 60.000 0.00 0.00 0.00 4.35
766 790 1.376037 CGACAGTCTCCCAAAGGCC 60.376 63.158 0.00 0.00 0.00 5.19
767 791 1.761174 GACAGTCTCCCAAAGGCCA 59.239 57.895 5.01 0.00 0.00 5.36
768 792 0.322008 GACAGTCTCCCAAAGGCCAG 60.322 60.000 5.01 0.00 0.00 4.85
769 793 0.768221 ACAGTCTCCCAAAGGCCAGA 60.768 55.000 5.01 0.00 0.00 3.86
770 794 0.622665 CAGTCTCCCAAAGGCCAGAT 59.377 55.000 5.01 0.00 0.00 2.90
771 795 0.622665 AGTCTCCCAAAGGCCAGATG 59.377 55.000 5.01 0.00 0.00 2.90
772 796 0.329596 GTCTCCCAAAGGCCAGATGT 59.670 55.000 5.01 0.00 0.00 3.06
773 797 0.329261 TCTCCCAAAGGCCAGATGTG 59.671 55.000 5.01 0.00 0.00 3.21
774 798 0.329261 CTCCCAAAGGCCAGATGTGA 59.671 55.000 5.01 0.00 0.00 3.58
775 799 0.776810 TCCCAAAGGCCAGATGTGAA 59.223 50.000 5.01 0.00 0.00 3.18
776 800 1.146774 TCCCAAAGGCCAGATGTGAAA 59.853 47.619 5.01 0.00 0.00 2.69
777 801 1.969923 CCCAAAGGCCAGATGTGAAAA 59.030 47.619 5.01 0.00 0.00 2.29
778 802 2.568509 CCCAAAGGCCAGATGTGAAAAT 59.431 45.455 5.01 0.00 0.00 1.82
779 803 3.368739 CCCAAAGGCCAGATGTGAAAATC 60.369 47.826 5.01 0.00 0.00 2.17
780 804 3.368739 CCAAAGGCCAGATGTGAAAATCC 60.369 47.826 5.01 0.00 0.00 3.01
781 805 3.463048 AAGGCCAGATGTGAAAATCCT 57.537 42.857 5.01 0.00 0.00 3.24
782 806 3.463048 AGGCCAGATGTGAAAATCCTT 57.537 42.857 5.01 0.00 0.00 3.36
783 807 3.359950 AGGCCAGATGTGAAAATCCTTC 58.640 45.455 5.01 0.00 0.00 3.46
784 808 3.011032 AGGCCAGATGTGAAAATCCTTCT 59.989 43.478 5.01 0.00 0.00 2.85
785 809 3.379688 GGCCAGATGTGAAAATCCTTCTC 59.620 47.826 0.00 0.00 0.00 2.87
786 810 4.012374 GCCAGATGTGAAAATCCTTCTCA 58.988 43.478 0.00 0.00 0.00 3.27
787 811 4.096081 GCCAGATGTGAAAATCCTTCTCAG 59.904 45.833 0.00 0.00 0.00 3.35
788 812 5.251764 CCAGATGTGAAAATCCTTCTCAGT 58.748 41.667 0.00 0.00 0.00 3.41
789 813 5.123502 CCAGATGTGAAAATCCTTCTCAGTG 59.876 44.000 0.00 0.00 0.00 3.66
790 814 5.123502 CAGATGTGAAAATCCTTCTCAGTGG 59.876 44.000 0.00 0.00 0.00 4.00
791 815 3.149196 TGTGAAAATCCTTCTCAGTGGC 58.851 45.455 0.00 0.00 0.00 5.01
792 816 2.489722 GTGAAAATCCTTCTCAGTGGCC 59.510 50.000 0.00 0.00 0.00 5.36
793 817 2.376518 TGAAAATCCTTCTCAGTGGCCT 59.623 45.455 3.32 0.00 0.00 5.19
794 818 3.587061 TGAAAATCCTTCTCAGTGGCCTA 59.413 43.478 3.32 0.00 0.00 3.93
795 819 3.636153 AAATCCTTCTCAGTGGCCTAC 57.364 47.619 3.32 0.00 0.00 3.18
796 820 2.254152 ATCCTTCTCAGTGGCCTACA 57.746 50.000 3.32 0.00 0.00 2.74
797 821 2.024176 TCCTTCTCAGTGGCCTACAA 57.976 50.000 3.32 0.00 0.00 2.41
798 822 2.334977 TCCTTCTCAGTGGCCTACAAA 58.665 47.619 3.32 0.00 0.00 2.83
799 823 2.708861 TCCTTCTCAGTGGCCTACAAAA 59.291 45.455 3.32 0.00 0.00 2.44
800 824 3.137544 TCCTTCTCAGTGGCCTACAAAAA 59.862 43.478 3.32 0.00 0.00 1.94
801 825 3.503748 CCTTCTCAGTGGCCTACAAAAAG 59.496 47.826 3.32 1.37 0.00 2.27
802 826 4.389374 CTTCTCAGTGGCCTACAAAAAGA 58.611 43.478 3.32 0.00 0.00 2.52
803 827 4.008074 TCTCAGTGGCCTACAAAAAGAG 57.992 45.455 3.32 0.38 0.00 2.85
804 828 2.485814 CTCAGTGGCCTACAAAAAGAGC 59.514 50.000 3.32 0.00 0.00 4.09
805 829 2.106511 TCAGTGGCCTACAAAAAGAGCT 59.893 45.455 3.32 0.00 0.00 4.09
806 830 2.887152 CAGTGGCCTACAAAAAGAGCTT 59.113 45.455 3.32 0.00 0.00 3.74
807 831 2.887152 AGTGGCCTACAAAAAGAGCTTG 59.113 45.455 3.32 0.00 0.00 4.01
808 832 2.029918 GTGGCCTACAAAAAGAGCTTGG 60.030 50.000 3.32 0.00 0.00 3.61
809 833 1.546029 GGCCTACAAAAAGAGCTTGGG 59.454 52.381 0.00 0.00 0.00 4.12
810 834 2.514803 GCCTACAAAAAGAGCTTGGGA 58.485 47.619 0.00 0.00 0.00 4.37
811 835 3.092301 GCCTACAAAAAGAGCTTGGGAT 58.908 45.455 0.00 0.00 0.00 3.85
812 836 3.119352 GCCTACAAAAAGAGCTTGGGATG 60.119 47.826 0.00 0.00 0.00 3.51
813 837 3.445096 CCTACAAAAAGAGCTTGGGATGG 59.555 47.826 0.00 0.00 0.00 3.51
814 838 2.250924 ACAAAAAGAGCTTGGGATGGG 58.749 47.619 0.00 0.00 0.00 4.00
815 839 1.551883 CAAAAAGAGCTTGGGATGGGG 59.448 52.381 0.00 0.00 0.00 4.96
816 840 0.041684 AAAAGAGCTTGGGATGGGGG 59.958 55.000 0.00 0.00 0.00 5.40
817 841 0.850883 AAAGAGCTTGGGATGGGGGA 60.851 55.000 0.00 0.00 0.00 4.81
818 842 0.628668 AAGAGCTTGGGATGGGGGAT 60.629 55.000 0.00 0.00 0.00 3.85
819 843 0.271927 AGAGCTTGGGATGGGGGATA 59.728 55.000 0.00 0.00 0.00 2.59
820 844 0.402121 GAGCTTGGGATGGGGGATAC 59.598 60.000 0.00 0.00 0.00 2.24
834 858 1.506493 GGATACCTCTCATGCTTGCG 58.494 55.000 0.00 0.00 0.00 4.85
835 859 1.069204 GGATACCTCTCATGCTTGCGA 59.931 52.381 0.00 0.00 0.00 5.10
836 860 2.402305 GATACCTCTCATGCTTGCGAG 58.598 52.381 11.58 11.58 35.00 5.03
837 861 1.186200 TACCTCTCATGCTTGCGAGT 58.814 50.000 15.88 8.56 33.67 4.18
838 862 0.322975 ACCTCTCATGCTTGCGAGTT 59.677 50.000 15.88 1.92 33.67 3.01
839 863 0.725686 CCTCTCATGCTTGCGAGTTG 59.274 55.000 15.88 1.39 33.67 3.16
840 864 0.096628 CTCTCATGCTTGCGAGTTGC 59.903 55.000 10.58 0.00 46.70 4.17
853 877 4.875544 GCGAGTTGCAAGGTATTATTGA 57.124 40.909 0.00 0.00 45.45 2.57
854 878 5.424121 GCGAGTTGCAAGGTATTATTGAT 57.576 39.130 0.00 0.00 45.45 2.57
855 879 5.444122 GCGAGTTGCAAGGTATTATTGATC 58.556 41.667 0.00 0.00 45.45 2.92
856 880 5.670097 CGAGTTGCAAGGTATTATTGATCG 58.330 41.667 0.00 0.00 0.00 3.69
857 881 5.424121 AGTTGCAAGGTATTATTGATCGC 57.576 39.130 0.00 0.00 0.00 4.58
858 882 4.275936 AGTTGCAAGGTATTATTGATCGCC 59.724 41.667 0.00 0.00 0.00 5.54
859 883 4.085357 TGCAAGGTATTATTGATCGCCT 57.915 40.909 0.00 0.00 0.00 5.52
860 884 4.460263 TGCAAGGTATTATTGATCGCCTT 58.540 39.130 0.00 0.00 35.12 4.35
861 885 5.616270 TGCAAGGTATTATTGATCGCCTTA 58.384 37.500 0.00 0.00 33.87 2.69
862 886 5.700832 TGCAAGGTATTATTGATCGCCTTAG 59.299 40.000 0.00 0.00 33.87 2.18
863 887 5.932303 GCAAGGTATTATTGATCGCCTTAGA 59.068 40.000 0.00 0.00 33.87 2.10
864 888 6.091441 GCAAGGTATTATTGATCGCCTTAGAG 59.909 42.308 0.00 0.00 33.87 2.43
865 889 7.378966 CAAGGTATTATTGATCGCCTTAGAGA 58.621 38.462 0.00 0.00 33.87 3.10
866 890 7.164230 AGGTATTATTGATCGCCTTAGAGAG 57.836 40.000 0.00 0.00 0.00 3.20
867 891 5.808030 GGTATTATTGATCGCCTTAGAGAGC 59.192 44.000 0.00 0.00 0.00 4.09
868 892 4.937201 TTATTGATCGCCTTAGAGAGCA 57.063 40.909 0.00 0.00 36.37 4.26
869 893 2.586258 TTGATCGCCTTAGAGAGCAC 57.414 50.000 0.00 0.00 37.96 4.40
870 894 0.747255 TGATCGCCTTAGAGAGCACC 59.253 55.000 0.00 0.00 33.04 5.01
871 895 1.036707 GATCGCCTTAGAGAGCACCT 58.963 55.000 0.00 0.00 0.00 4.00
872 896 1.000717 GATCGCCTTAGAGAGCACCTC 60.001 57.143 0.00 0.00 42.28 3.85
873 897 0.323451 TCGCCTTAGAGAGCACCTCA 60.323 55.000 8.53 0.00 44.40 3.86
874 898 0.532573 CGCCTTAGAGAGCACCTCAA 59.467 55.000 8.53 1.65 44.40 3.02
875 899 1.066858 CGCCTTAGAGAGCACCTCAAA 60.067 52.381 8.53 0.00 44.40 2.69
876 900 2.351455 GCCTTAGAGAGCACCTCAAAC 58.649 52.381 8.53 0.00 44.40 2.93
877 901 2.289694 GCCTTAGAGAGCACCTCAAACA 60.290 50.000 8.53 0.00 44.40 2.83
878 902 3.620966 GCCTTAGAGAGCACCTCAAACAT 60.621 47.826 8.53 0.00 44.40 2.71
879 903 4.383118 GCCTTAGAGAGCACCTCAAACATA 60.383 45.833 8.53 0.00 44.40 2.29
880 904 5.734720 CCTTAGAGAGCACCTCAAACATAA 58.265 41.667 8.53 0.00 44.40 1.90
881 905 5.814705 CCTTAGAGAGCACCTCAAACATAAG 59.185 44.000 8.53 6.89 44.40 1.73
882 906 6.351371 CCTTAGAGAGCACCTCAAACATAAGA 60.351 42.308 8.53 0.00 44.40 2.10
883 907 5.083533 AGAGAGCACCTCAAACATAAGAG 57.916 43.478 8.53 0.00 44.40 2.85
916 940 8.425577 TTTCTTCTATACTCACTAATGCTTGC 57.574 34.615 0.00 0.00 0.00 4.01
917 941 7.112452 TCTTCTATACTCACTAATGCTTGCA 57.888 36.000 0.00 0.00 0.00 4.08
918 942 7.730084 TCTTCTATACTCACTAATGCTTGCAT 58.270 34.615 1.81 1.81 0.00 3.96
919 943 7.654923 TCTTCTATACTCACTAATGCTTGCATG 59.345 37.037 8.98 0.39 0.00 4.06
920 944 6.226052 TCTATACTCACTAATGCTTGCATGG 58.774 40.000 8.98 7.84 0.00 3.66
921 945 2.372264 ACTCACTAATGCTTGCATGGG 58.628 47.619 8.98 7.52 0.00 4.00
922 946 1.066605 CTCACTAATGCTTGCATGGGC 59.933 52.381 8.98 1.00 41.68 5.36
923 947 0.248743 CACTAATGCTTGCATGGGCG 60.249 55.000 8.98 1.39 45.35 6.13
924 948 0.394216 ACTAATGCTTGCATGGGCGA 60.394 50.000 8.98 0.00 45.35 5.54
929 953 4.308526 CTTGCATGGGCGAGTTCT 57.691 55.556 0.00 0.00 45.01 3.01
930 954 2.559785 CTTGCATGGGCGAGTTCTT 58.440 52.632 0.00 0.00 45.01 2.52
931 955 1.737838 CTTGCATGGGCGAGTTCTTA 58.262 50.000 0.00 0.00 45.01 2.10
932 956 2.083774 CTTGCATGGGCGAGTTCTTAA 58.916 47.619 0.00 0.00 45.01 1.85
933 957 2.418368 TGCATGGGCGAGTTCTTAAT 57.582 45.000 0.00 0.00 45.35 1.40
934 958 3.552132 TGCATGGGCGAGTTCTTAATA 57.448 42.857 0.00 0.00 45.35 0.98
935 959 3.879998 TGCATGGGCGAGTTCTTAATAA 58.120 40.909 0.00 0.00 45.35 1.40
936 960 4.460263 TGCATGGGCGAGTTCTTAATAAT 58.540 39.130 0.00 0.00 45.35 1.28
937 961 4.887071 TGCATGGGCGAGTTCTTAATAATT 59.113 37.500 0.00 0.00 45.35 1.40
938 962 5.215160 GCATGGGCGAGTTCTTAATAATTG 58.785 41.667 0.00 0.00 0.00 2.32
939 963 5.221048 GCATGGGCGAGTTCTTAATAATTGT 60.221 40.000 0.00 0.00 0.00 2.71
940 964 5.811399 TGGGCGAGTTCTTAATAATTGTG 57.189 39.130 0.00 0.00 0.00 3.33
941 965 5.250200 TGGGCGAGTTCTTAATAATTGTGT 58.750 37.500 0.00 0.00 0.00 3.72
942 966 5.123186 TGGGCGAGTTCTTAATAATTGTGTG 59.877 40.000 0.00 0.00 0.00 3.82
943 967 5.353123 GGGCGAGTTCTTAATAATTGTGTGA 59.647 40.000 0.00 0.00 0.00 3.58
944 968 6.248631 GGCGAGTTCTTAATAATTGTGTGAC 58.751 40.000 0.00 0.00 0.00 3.67
945 969 6.128391 GGCGAGTTCTTAATAATTGTGTGACA 60.128 38.462 0.00 0.00 0.00 3.58
946 970 7.295201 GCGAGTTCTTAATAATTGTGTGACAA 58.705 34.615 0.00 0.00 42.95 3.18
947 971 7.268447 GCGAGTTCTTAATAATTGTGTGACAAC 59.732 37.037 0.00 0.00 41.40 3.32
948 972 8.279800 CGAGTTCTTAATAATTGTGTGACAACA 58.720 33.333 0.00 0.00 41.40 3.33
949 973 9.944663 GAGTTCTTAATAATTGTGTGACAACAA 57.055 29.630 0.00 0.00 41.40 2.83
957 981 9.528018 AATAATTGTGTGACAACAAACTTTAGG 57.472 29.630 5.07 0.00 41.40 2.69
958 982 4.974368 TGTGTGACAACAAACTTTAGGG 57.026 40.909 0.00 0.00 38.27 3.53
959 983 4.337145 TGTGTGACAACAAACTTTAGGGT 58.663 39.130 0.00 0.00 38.27 4.34
960 984 4.767928 TGTGTGACAACAAACTTTAGGGTT 59.232 37.500 0.00 0.00 38.27 4.11
962 986 5.010933 TGTGACAACAAACTTTAGGGTTGA 58.989 37.500 10.00 0.00 44.88 3.18
963 987 5.477291 TGTGACAACAAACTTTAGGGTTGAA 59.523 36.000 10.00 0.00 44.88 2.69
964 988 5.803461 GTGACAACAAACTTTAGGGTTGAAC 59.197 40.000 10.00 4.80 44.88 3.18
965 989 5.105675 TGACAACAAACTTTAGGGTTGAACC 60.106 40.000 5.62 5.62 44.88 3.62
966 990 5.020795 ACAACAAACTTTAGGGTTGAACCT 58.979 37.500 14.87 0.47 44.88 3.50
967 991 5.105513 ACAACAAACTTTAGGGTTGAACCTG 60.106 40.000 14.87 4.42 44.88 4.00
968 992 4.862371 ACAAACTTTAGGGTTGAACCTGA 58.138 39.130 14.87 0.00 44.88 3.86
969 993 4.887655 ACAAACTTTAGGGTTGAACCTGAG 59.112 41.667 14.87 9.31 44.88 3.35
970 994 5.130350 CAAACTTTAGGGTTGAACCTGAGA 58.870 41.667 14.87 0.00 44.88 3.27
971 995 5.584551 AACTTTAGGGTTGAACCTGAGAT 57.415 39.130 14.87 0.00 42.02 2.75
972 996 5.584551 ACTTTAGGGTTGAACCTGAGATT 57.415 39.130 14.87 0.00 42.02 2.40
973 997 5.953571 ACTTTAGGGTTGAACCTGAGATTT 58.046 37.500 14.87 0.00 42.02 2.17
974 998 6.004574 ACTTTAGGGTTGAACCTGAGATTTC 58.995 40.000 14.87 0.00 42.02 2.17
975 999 3.441500 AGGGTTGAACCTGAGATTTCC 57.558 47.619 14.87 0.00 40.04 3.13
976 1000 2.989571 AGGGTTGAACCTGAGATTTCCT 59.010 45.455 14.87 0.00 40.04 3.36
977 1001 3.399305 AGGGTTGAACCTGAGATTTCCTT 59.601 43.478 14.87 0.00 40.04 3.36
978 1002 3.759086 GGGTTGAACCTGAGATTTCCTTC 59.241 47.826 14.87 0.00 38.64 3.46
979 1003 4.507512 GGGTTGAACCTGAGATTTCCTTCT 60.508 45.833 14.87 0.00 38.64 2.85
980 1004 5.280521 GGGTTGAACCTGAGATTTCCTTCTA 60.281 44.000 14.87 0.00 38.64 2.10
981 1005 6.418946 GGTTGAACCTGAGATTTCCTTCTAT 58.581 40.000 7.20 0.00 34.73 1.98
982 1006 6.887002 GGTTGAACCTGAGATTTCCTTCTATT 59.113 38.462 7.20 0.00 34.73 1.73
983 1007 7.394641 GGTTGAACCTGAGATTTCCTTCTATTT 59.605 37.037 7.20 0.00 34.73 1.40
984 1008 9.449719 GTTGAACCTGAGATTTCCTTCTATTTA 57.550 33.333 0.00 0.00 0.00 1.40
989 1013 9.634021 ACCTGAGATTTCCTTCTATTTAAATCC 57.366 33.333 3.39 0.00 38.51 3.01
990 1014 9.072375 CCTGAGATTTCCTTCTATTTAAATCCC 57.928 37.037 3.39 0.00 38.51 3.85
991 1015 9.859152 CTGAGATTTCCTTCTATTTAAATCCCT 57.141 33.333 3.39 0.00 38.51 4.20
998 1022 9.916360 TTCCTTCTATTTAAATCCCTAGTTTCC 57.084 33.333 3.39 0.00 0.00 3.13
999 1023 9.292751 TCCTTCTATTTAAATCCCTAGTTTCCT 57.707 33.333 3.39 0.00 0.00 3.36
1003 1027 8.645110 TCTATTTAAATCCCTAGTTTCCTACGG 58.355 37.037 3.39 0.00 0.00 4.02
1004 1028 3.555527 AAATCCCTAGTTTCCTACGGC 57.444 47.619 0.00 0.00 0.00 5.68
1014 1039 6.424207 CCTAGTTTCCTACGGCATTTCTATTC 59.576 42.308 0.00 0.00 0.00 1.75
1015 1040 5.123936 AGTTTCCTACGGCATTTCTATTCC 58.876 41.667 0.00 0.00 0.00 3.01
1037 1062 4.627058 CCCCCTTAAATGTTGAAACACAC 58.373 43.478 0.00 0.00 42.51 3.82
1038 1063 4.100189 CCCCCTTAAATGTTGAAACACACA 59.900 41.667 0.00 0.00 42.51 3.72
1039 1064 5.221621 CCCCCTTAAATGTTGAAACACACAT 60.222 40.000 0.00 0.00 42.51 3.21
1048 1073 6.146601 TGTTGAAACACACATGTCATCATT 57.853 33.333 0.00 0.00 38.45 2.57
1049 1074 6.571605 TGTTGAAACACACATGTCATCATTT 58.428 32.000 0.00 0.00 38.45 2.32
1050 1075 6.696583 TGTTGAAACACACATGTCATCATTTC 59.303 34.615 0.00 3.28 38.45 2.17
1052 1077 6.671190 TGAAACACACATGTCATCATTTCTC 58.329 36.000 0.00 0.00 38.45 2.87
1062 1087 8.708378 ACATGTCATCATTTCTCACTATCCTTA 58.292 33.333 0.00 0.00 31.15 2.69
1103 1129 9.588096 AGTTTTGATTCTTTCCTATGTACCTTT 57.412 29.630 0.00 0.00 0.00 3.11
1137 1178 9.809096 AAGCTGATATAATGTATGAATACCTCG 57.191 33.333 0.00 0.00 32.33 4.63
1138 1179 8.972127 AGCTGATATAATGTATGAATACCTCGT 58.028 33.333 0.00 0.00 32.33 4.18
1139 1180 9.025020 GCTGATATAATGTATGAATACCTCGTG 57.975 37.037 0.00 0.00 32.33 4.35
1231 1273 0.965439 TGCCTTTCCGGAAAATGGTG 59.035 50.000 28.62 17.02 33.16 4.17
1248 1290 5.894298 ATGGTGATGGAAGCAGAGTAATA 57.106 39.130 0.00 0.00 24.12 0.98
1261 1303 5.184479 AGCAGAGTAATAGTAACCACACGAA 59.816 40.000 0.00 0.00 0.00 3.85
1275 1317 2.609459 CACACGAATGGAAGACATAGCC 59.391 50.000 0.00 0.00 39.40 3.93
1281 1323 2.590821 ATGGAAGACATAGCCATTGGC 58.409 47.619 20.38 20.38 39.28 4.52
1283 1325 5.584067 ATGGAAGACATAGCCATTGGCGT 62.584 47.826 21.60 13.77 42.72 5.68
1302 1344 2.476821 GTGTGTTACAGTAACCGTGCT 58.523 47.619 18.94 0.00 37.88 4.40
1312 1354 2.486592 AGTAACCGTGCTTGCATTTACC 59.513 45.455 15.04 0.00 0.00 2.85
1321 1363 3.755905 TGCTTGCATTTACCGAATGAAGA 59.244 39.130 3.12 0.00 46.59 2.87
1322 1364 4.142622 TGCTTGCATTTACCGAATGAAGAG 60.143 41.667 3.12 0.00 46.59 2.85
1388 1430 1.976474 GGCCCGAAAATGTCTGCCA 60.976 57.895 0.00 0.00 40.07 4.92
1536 1580 6.628844 GCATAAAGAATTCTCTTGGTGCCAAT 60.629 38.462 8.78 0.00 41.23 3.16
1671 1715 1.000827 CGTGAGATTCCGAGGGATGAG 60.001 57.143 0.00 0.00 0.00 2.90
1689 1733 1.869767 GAGCTAGTTCGGCAATGGATG 59.130 52.381 0.00 0.00 0.00 3.51
1863 1907 8.442632 TTGATTTGATCCTAAGCAAGAGTATG 57.557 34.615 4.75 0.00 31.36 2.39
2031 2084 4.448732 CGATCATATGCATGGTTTCGAGAA 59.551 41.667 10.16 0.00 34.36 2.87
2043 2097 4.019681 TGGTTTCGAGAATCCCAATACACT 60.020 41.667 9.66 0.00 30.87 3.55
2088 2142 0.179015 TACGGGTGCTTGCCTTTGAA 60.179 50.000 0.00 0.00 0.00 2.69
2096 2150 2.299867 TGCTTGCCTTTGAATTCCCTTC 59.700 45.455 2.27 0.00 0.00 3.46
2097 2151 2.672195 GCTTGCCTTTGAATTCCCTTCG 60.672 50.000 2.27 0.00 36.60 3.79
2099 2153 1.177401 GCCTTTGAATTCCCTTCGCT 58.823 50.000 2.27 0.00 36.60 4.93
2109 2163 3.446310 TTCCCTTCGCTTTTGAAAACC 57.554 42.857 0.00 0.00 0.00 3.27
2188 2242 1.068281 CCTCATCAGCAGTCATAGCGT 59.932 52.381 0.00 0.00 37.01 5.07
2197 2251 0.892755 AGTCATAGCGTTCCCGACAA 59.107 50.000 0.00 0.00 35.63 3.18
2242 2296 4.142708 TGCAAACTCTTGTGGTATATTGCG 60.143 41.667 0.00 0.00 43.48 4.85
2310 2364 5.787953 TGTTTCATTTGATGCTTCCAAGA 57.212 34.783 0.00 0.00 0.00 3.02
2312 2366 5.535783 TGTTTCATTTGATGCTTCCAAGAGA 59.464 36.000 0.00 0.00 0.00 3.10
2318 2372 7.389884 TCATTTGATGCTTCCAAGAGATATAGC 59.610 37.037 0.00 0.00 0.00 2.97
2331 2385 2.700897 AGATATAGCGTTGCCTGAAGGT 59.299 45.455 0.00 0.00 37.57 3.50
2443 2500 7.824289 TGACCAATCTGAAGGAATTGTACTTAG 59.176 37.037 6.53 0.00 0.00 2.18
2444 2501 7.918076 ACCAATCTGAAGGAATTGTACTTAGA 58.082 34.615 6.53 0.00 0.00 2.10
2449 2506 6.208007 TCTGAAGGAATTGTACTTAGACACGA 59.792 38.462 0.00 0.00 0.00 4.35
2451 2508 6.643770 TGAAGGAATTGTACTTAGACACGAAC 59.356 38.462 0.00 0.00 0.00 3.95
2458 2515 6.964741 TGTACTTAGACACGAACAAAAACA 57.035 33.333 0.00 0.00 0.00 2.83
2460 2517 7.976826 TGTACTTAGACACGAACAAAAACAAT 58.023 30.769 0.00 0.00 0.00 2.71
2517 2574 1.559219 TCCATCGGAATGCTCCAAGAA 59.441 47.619 0.00 0.00 42.58 2.52
2524 2581 3.679389 GGAATGCTCCAAGAACTCAAGA 58.321 45.455 0.00 0.00 41.96 3.02
2525 2582 4.268359 GGAATGCTCCAAGAACTCAAGAT 58.732 43.478 0.00 0.00 41.96 2.40
2529 2586 3.328931 TGCTCCAAGAACTCAAGATCCTT 59.671 43.478 0.00 0.00 0.00 3.36
2530 2587 4.532126 TGCTCCAAGAACTCAAGATCCTTA 59.468 41.667 0.00 0.00 0.00 2.69
2543 2600 3.185455 AGATCCTTAAGCTCAAGTGGGT 58.815 45.455 0.00 0.00 0.00 4.51
2553 2610 2.034066 AAGTGGGTGCGTGGATGG 59.966 61.111 0.00 0.00 0.00 3.51
2556 2613 4.408821 TGGGTGCGTGGATGGAGC 62.409 66.667 0.00 0.00 0.00 4.70
2563 2620 1.807226 CGTGGATGGAGCGACACTA 59.193 57.895 0.00 0.00 0.00 2.74
2565 2622 0.103208 GTGGATGGAGCGACACTAGG 59.897 60.000 0.00 0.00 0.00 3.02
2577 2634 0.975040 ACACTAGGAGCCAGCTGGAG 60.975 60.000 37.21 25.08 37.39 3.86
2598 2655 4.825445 AGTCATTACATGATCCTCCTCCT 58.175 43.478 0.00 0.00 42.04 3.69
2655 2712 5.714806 GTCCAAAAGAGTTCCCAAATGGATA 59.285 40.000 0.00 0.00 44.66 2.59
2667 2724 4.137543 CCAAATGGATAGGTGAACTAGGC 58.862 47.826 0.00 0.00 37.39 3.93
2685 2746 2.833582 TGCCTCCGGATCCTCGAC 60.834 66.667 3.57 0.00 0.00 4.20
2691 2752 2.491022 CCGGATCCTCGACCTGGAC 61.491 68.421 10.75 0.00 36.30 4.02
2718 2830 1.000274 CACCTGTCGAGTGATGTGTCA 60.000 52.381 0.00 0.00 37.42 3.58
2727 2839 3.433709 GAGTGATGTGTCAGATGTCTCG 58.566 50.000 0.00 0.00 34.36 4.04
2750 2862 2.387757 AGACAAAGTTGTGGTTGGCAT 58.612 42.857 0.42 0.00 42.43 4.40
2780 2892 1.882623 CCCAGTTCTGGAGCACTTTTC 59.117 52.381 19.12 0.00 0.00 2.29
2785 2897 3.312697 AGTTCTGGAGCACTTTTCGTTTC 59.687 43.478 0.00 0.00 0.00 2.78
2789 2901 2.612212 TGGAGCACTTTTCGTTTCAGTC 59.388 45.455 0.00 0.00 0.00 3.51
2792 2904 3.531538 AGCACTTTTCGTTTCAGTCTGA 58.468 40.909 0.00 0.00 0.00 3.27
2793 2905 3.557595 AGCACTTTTCGTTTCAGTCTGAG 59.442 43.478 2.12 0.00 0.00 3.35
2794 2906 3.303395 GCACTTTTCGTTTCAGTCTGAGG 60.303 47.826 2.12 0.00 0.00 3.86
2801 2913 3.574396 TCGTTTCAGTCTGAGGAAGATGT 59.426 43.478 2.12 0.00 37.23 3.06
2806 2918 5.336150 TCAGTCTGAGGAAGATGTCAATC 57.664 43.478 0.00 0.00 37.23 2.67
2811 2923 4.098044 TCTGAGGAAGATGTCAATCCGTAC 59.902 45.833 0.00 0.00 38.31 3.67
2820 2932 1.068741 GTCAATCCGTACCTGCCCTAG 59.931 57.143 0.00 0.00 0.00 3.02
2837 2949 4.042684 GCCCTAGGATTCATCTGGAAAGAT 59.957 45.833 11.48 0.00 39.39 2.40
2846 2958 4.107072 TCATCTGGAAAGATTGGAGAGGT 58.893 43.478 0.00 0.00 0.00 3.85
2847 2959 3.988976 TCTGGAAAGATTGGAGAGGTG 57.011 47.619 0.00 0.00 0.00 4.00
2848 2960 2.026822 TCTGGAAAGATTGGAGAGGTGC 60.027 50.000 0.00 0.00 0.00 5.01
2849 2961 1.988107 TGGAAAGATTGGAGAGGTGCT 59.012 47.619 0.00 0.00 0.00 4.40
2850 2962 3.181329 TGGAAAGATTGGAGAGGTGCTA 58.819 45.455 0.00 0.00 0.00 3.49
2851 2963 3.055094 TGGAAAGATTGGAGAGGTGCTAC 60.055 47.826 0.00 0.00 0.00 3.58
2853 2965 3.618690 AAGATTGGAGAGGTGCTACAC 57.381 47.619 0.00 0.00 37.12 2.90
2864 2976 1.726853 GTGCTACACCAGTAGGCTTG 58.273 55.000 0.00 0.00 46.30 4.01
2865 2977 0.613260 TGCTACACCAGTAGGCTTGG 59.387 55.000 3.63 3.63 46.30 3.61
2866 2978 0.902531 GCTACACCAGTAGGCTTGGA 59.097 55.000 12.14 0.00 46.30 3.53
2868 2980 2.180276 CTACACCAGTAGGCTTGGAGT 58.820 52.381 12.14 12.10 43.24 3.85
2877 2989 4.357279 GCTTGGAGTGCCTGCCCT 62.357 66.667 0.00 0.00 34.31 5.19
2878 2990 2.360852 CTTGGAGTGCCTGCCCTG 60.361 66.667 0.00 0.00 34.31 4.45
2879 2991 4.666253 TTGGAGTGCCTGCCCTGC 62.666 66.667 0.00 0.00 34.31 4.85
2882 2994 4.792804 GAGTGCCTGCCCTGCCTC 62.793 72.222 0.00 0.00 0.00 4.70
2889 3001 1.075482 CTGCCCTGCCTCCAGAAAA 59.925 57.895 0.00 0.00 41.77 2.29
2890 3002 0.324091 CTGCCCTGCCTCCAGAAAAT 60.324 55.000 0.00 0.00 41.77 1.82
2891 3003 0.323725 TGCCCTGCCTCCAGAAAATC 60.324 55.000 0.00 0.00 41.77 2.17
2893 3005 0.253044 CCCTGCCTCCAGAAAATCGA 59.747 55.000 0.00 0.00 41.77 3.59
2894 3006 1.340017 CCCTGCCTCCAGAAAATCGAA 60.340 52.381 0.00 0.00 41.77 3.71
2895 3007 2.012673 CCTGCCTCCAGAAAATCGAAG 58.987 52.381 0.00 0.00 41.77 3.79
2896 3008 2.616510 CCTGCCTCCAGAAAATCGAAGT 60.617 50.000 0.00 0.00 41.77 3.01
2897 3009 2.417933 CTGCCTCCAGAAAATCGAAGTG 59.582 50.000 0.00 0.00 41.77 3.16
2898 3010 2.224523 TGCCTCCAGAAAATCGAAGTGT 60.225 45.455 0.00 0.00 0.00 3.55
2899 3011 2.814336 GCCTCCAGAAAATCGAAGTGTT 59.186 45.455 0.00 0.00 0.00 3.32
2900 3012 3.120165 GCCTCCAGAAAATCGAAGTGTTC 60.120 47.826 0.00 0.00 0.00 3.18
2902 3014 4.083802 CCTCCAGAAAATCGAAGTGTTCAC 60.084 45.833 0.00 0.00 0.00 3.18
2903 3015 3.493129 TCCAGAAAATCGAAGTGTTCACG 59.507 43.478 0.00 0.00 0.00 4.35
2904 3016 3.493129 CCAGAAAATCGAAGTGTTCACGA 59.507 43.478 0.00 0.00 40.18 4.35
2905 3017 4.376413 CCAGAAAATCGAAGTGTTCACGAG 60.376 45.833 0.00 0.00 39.31 4.18
2906 3018 3.741344 AGAAAATCGAAGTGTTCACGAGG 59.259 43.478 0.00 0.00 39.31 4.63
2907 3019 2.814280 AATCGAAGTGTTCACGAGGT 57.186 45.000 0.00 0.00 39.31 3.85
2908 3020 3.928727 AATCGAAGTGTTCACGAGGTA 57.071 42.857 0.00 0.00 39.31 3.08
2909 3021 2.693797 TCGAAGTGTTCACGAGGTAC 57.306 50.000 0.00 0.00 0.00 3.34
2910 3022 1.267806 TCGAAGTGTTCACGAGGTACC 59.732 52.381 2.73 2.73 0.00 3.34
2911 3023 1.668047 CGAAGTGTTCACGAGGTACCC 60.668 57.143 8.74 0.00 0.00 3.69
2912 3024 0.316204 AAGTGTTCACGAGGTACCCG 59.684 55.000 17.82 17.82 34.03 5.28
2913 3025 1.735559 GTGTTCACGAGGTACCCGC 60.736 63.158 18.93 7.38 27.05 6.13
2914 3026 2.201708 TGTTCACGAGGTACCCGCA 61.202 57.895 18.93 8.91 27.05 5.69
2915 3027 1.445582 GTTCACGAGGTACCCGCAG 60.446 63.158 18.93 13.36 27.05 5.18
2916 3028 1.604308 TTCACGAGGTACCCGCAGA 60.604 57.895 18.93 14.99 27.05 4.26
2917 3029 1.180456 TTCACGAGGTACCCGCAGAA 61.180 55.000 18.93 18.64 27.05 3.02
2918 3030 1.153823 CACGAGGTACCCGCAGAAG 60.154 63.158 18.93 2.84 27.05 2.85
2919 3031 2.202756 CGAGGTACCCGCAGAAGC 60.203 66.667 8.74 0.00 37.42 3.86
2920 3032 2.187163 GAGGTACCCGCAGAAGCC 59.813 66.667 8.74 0.00 37.52 4.35
2921 3033 3.718210 GAGGTACCCGCAGAAGCCG 62.718 68.421 8.74 0.00 37.52 5.52
2922 3034 3.766691 GGTACCCGCAGAAGCCGA 61.767 66.667 0.00 0.00 37.52 5.54
2923 3035 2.508663 GTACCCGCAGAAGCCGAC 60.509 66.667 0.00 0.00 37.52 4.79
2924 3036 2.678934 TACCCGCAGAAGCCGACT 60.679 61.111 0.00 0.00 37.52 4.18
2925 3037 2.707849 TACCCGCAGAAGCCGACTC 61.708 63.158 0.00 0.00 37.52 3.36
2926 3038 3.764466 CCCGCAGAAGCCGACTCT 61.764 66.667 0.00 0.00 37.52 3.24
2927 3039 2.507992 CCGCAGAAGCCGACTCTG 60.508 66.667 4.55 4.55 37.52 3.35
2928 3040 2.568612 CGCAGAAGCCGACTCTGA 59.431 61.111 11.19 0.00 37.52 3.27
2929 3041 1.140589 CGCAGAAGCCGACTCTGAT 59.859 57.895 11.19 0.00 37.52 2.90
2930 3042 0.459237 CGCAGAAGCCGACTCTGATT 60.459 55.000 11.19 0.00 37.52 2.57
2931 3043 1.731720 GCAGAAGCCGACTCTGATTT 58.268 50.000 11.19 0.00 33.65 2.17
2932 3044 1.663135 GCAGAAGCCGACTCTGATTTC 59.337 52.381 11.19 0.00 33.65 2.17
2933 3045 2.932622 GCAGAAGCCGACTCTGATTTCA 60.933 50.000 11.19 0.00 33.65 2.69
2934 3046 3.329386 CAGAAGCCGACTCTGATTTCAA 58.671 45.455 3.14 0.00 33.65 2.69
2935 3047 3.370366 CAGAAGCCGACTCTGATTTCAAG 59.630 47.826 3.14 0.00 33.65 3.02
2936 3048 2.393271 AGCCGACTCTGATTTCAAGG 57.607 50.000 0.00 0.00 0.00 3.61
2937 3049 1.065854 AGCCGACTCTGATTTCAAGGG 60.066 52.381 0.00 0.00 0.00 3.95
2938 3050 1.339151 GCCGACTCTGATTTCAAGGGT 60.339 52.381 0.00 0.00 0.00 4.34
2939 3051 2.350522 CCGACTCTGATTTCAAGGGTG 58.649 52.381 0.00 0.00 0.00 4.61
2940 3052 1.734465 CGACTCTGATTTCAAGGGTGC 59.266 52.381 0.00 0.00 0.00 5.01
2941 3053 2.087646 GACTCTGATTTCAAGGGTGCC 58.912 52.381 0.00 0.00 0.00 5.01
2942 3054 1.089920 CTCTGATTTCAAGGGTGCCG 58.910 55.000 0.00 0.00 0.00 5.69
2943 3055 0.960364 TCTGATTTCAAGGGTGCCGC 60.960 55.000 0.00 0.00 0.00 6.53
2944 3056 1.228398 TGATTTCAAGGGTGCCGCA 60.228 52.632 0.00 0.00 0.00 5.69
2945 3057 0.825425 TGATTTCAAGGGTGCCGCAA 60.825 50.000 0.00 0.00 0.00 4.85
2946 3058 0.109132 GATTTCAAGGGTGCCGCAAG 60.109 55.000 0.00 0.00 0.00 4.01
2958 3070 3.118454 CGCAAGGTGTACGGGCTG 61.118 66.667 0.00 0.00 0.00 4.85
2961 3073 0.887387 GCAAGGTGTACGGGCTGAAA 60.887 55.000 0.00 0.00 0.00 2.69
2963 3075 1.737793 CAAGGTGTACGGGCTGAAATC 59.262 52.381 0.00 0.00 0.00 2.17
2990 3102 1.968017 CTTCAAGGCTGCCGCAAGA 60.968 57.895 13.96 7.15 43.02 3.02
3005 3117 1.108727 CAAGACTGCACCCAAGGCAA 61.109 55.000 0.00 0.00 41.39 4.52
3014 3126 1.303643 CCCAAGGCAACCCTCTGTC 60.304 63.158 0.00 0.00 41.90 3.51
3015 3127 1.455849 CCAAGGCAACCCTCTGTCA 59.544 57.895 0.00 0.00 41.90 3.58
3016 3128 0.038744 CCAAGGCAACCCTCTGTCAT 59.961 55.000 0.00 0.00 41.90 3.06
3018 3130 2.290896 CCAAGGCAACCCTCTGTCATTA 60.291 50.000 0.00 0.00 41.90 1.90
3019 3131 2.749621 CAAGGCAACCCTCTGTCATTAC 59.250 50.000 0.00 0.00 41.90 1.89
3020 3132 1.985159 AGGCAACCCTCTGTCATTACA 59.015 47.619 0.00 0.00 36.46 2.41
3021 3133 2.578021 AGGCAACCCTCTGTCATTACAT 59.422 45.455 0.00 0.00 36.46 2.29
3022 3134 3.010584 AGGCAACCCTCTGTCATTACATT 59.989 43.478 0.00 0.00 36.46 2.71
3023 3135 3.378427 GGCAACCCTCTGTCATTACATTC 59.622 47.826 0.00 0.00 34.37 2.67
3024 3136 3.378427 GCAACCCTCTGTCATTACATTCC 59.622 47.826 0.00 0.00 34.37 3.01
3025 3137 4.848357 CAACCCTCTGTCATTACATTCCT 58.152 43.478 0.00 0.00 34.37 3.36
3026 3138 4.762289 ACCCTCTGTCATTACATTCCTC 57.238 45.455 0.00 0.00 34.37 3.71
3028 3140 4.163078 ACCCTCTGTCATTACATTCCTCTG 59.837 45.833 0.00 0.00 34.37 3.35
3029 3141 4.163078 CCCTCTGTCATTACATTCCTCTGT 59.837 45.833 0.00 0.00 34.37 3.41
3030 3142 5.355596 CCTCTGTCATTACATTCCTCTGTC 58.644 45.833 0.00 0.00 34.37 3.51
3031 3143 5.128499 CCTCTGTCATTACATTCCTCTGTCT 59.872 44.000 0.00 0.00 34.37 3.41
3032 3144 5.970592 TCTGTCATTACATTCCTCTGTCTG 58.029 41.667 0.00 0.00 34.37 3.51
3033 3145 5.481824 TCTGTCATTACATTCCTCTGTCTGT 59.518 40.000 0.00 0.00 34.37 3.41
3034 3146 6.663523 TCTGTCATTACATTCCTCTGTCTGTA 59.336 38.462 0.00 0.00 34.37 2.74
3035 3147 7.178451 TCTGTCATTACATTCCTCTGTCTGTAA 59.822 37.037 0.00 0.00 38.16 2.41
3036 3148 7.097192 TGTCATTACATTCCTCTGTCTGTAAC 58.903 38.462 0.00 0.00 37.03 2.50
3037 3149 7.039011 TGTCATTACATTCCTCTGTCTGTAACT 60.039 37.037 0.00 0.00 37.03 2.24
3038 3150 7.819900 GTCATTACATTCCTCTGTCTGTAACTT 59.180 37.037 0.00 0.00 37.03 2.66
3039 3151 9.031537 TCATTACATTCCTCTGTCTGTAACTTA 57.968 33.333 0.00 0.00 37.03 2.24
3040 3152 9.653287 CATTACATTCCTCTGTCTGTAACTTAA 57.347 33.333 0.00 0.00 37.03 1.85
3042 3154 9.871238 TTACATTCCTCTGTCTGTAACTTAATC 57.129 33.333 0.00 0.00 31.14 1.75
3043 3155 7.036220 ACATTCCTCTGTCTGTAACTTAATCG 58.964 38.462 0.00 0.00 0.00 3.34
3044 3156 6.829229 TTCCTCTGTCTGTAACTTAATCGA 57.171 37.500 0.00 0.00 0.00 3.59
3045 3157 6.438259 TCCTCTGTCTGTAACTTAATCGAG 57.562 41.667 0.00 0.00 0.00 4.04
3046 3158 5.944599 TCCTCTGTCTGTAACTTAATCGAGT 59.055 40.000 0.00 0.00 0.00 4.18
3047 3159 6.093771 TCCTCTGTCTGTAACTTAATCGAGTC 59.906 42.308 0.00 0.00 0.00 3.36
3048 3160 6.094325 CCTCTGTCTGTAACTTAATCGAGTCT 59.906 42.308 0.00 0.00 0.00 3.24
3049 3161 6.843208 TCTGTCTGTAACTTAATCGAGTCTG 58.157 40.000 0.00 0.00 0.00 3.51
3050 3162 5.399858 TGTCTGTAACTTAATCGAGTCTGC 58.600 41.667 0.00 0.00 0.00 4.26
3051 3163 4.799428 GTCTGTAACTTAATCGAGTCTGCC 59.201 45.833 0.00 0.00 0.00 4.85
3052 3164 4.705507 TCTGTAACTTAATCGAGTCTGCCT 59.294 41.667 0.00 0.00 0.00 4.75
3053 3165 5.185249 TCTGTAACTTAATCGAGTCTGCCTT 59.815 40.000 0.00 0.00 0.00 4.35
3054 3166 6.376299 TCTGTAACTTAATCGAGTCTGCCTTA 59.624 38.462 0.00 0.00 0.00 2.69
3055 3167 6.561614 TGTAACTTAATCGAGTCTGCCTTAG 58.438 40.000 0.00 0.00 0.00 2.18
3056 3168 4.657436 ACTTAATCGAGTCTGCCTTAGG 57.343 45.455 0.00 0.00 0.00 2.69
3057 3169 3.385111 ACTTAATCGAGTCTGCCTTAGGG 59.615 47.826 0.00 0.00 0.00 3.53
3058 3170 1.867363 AATCGAGTCTGCCTTAGGGT 58.133 50.000 0.00 0.00 34.45 4.34
3059 3171 1.115467 ATCGAGTCTGCCTTAGGGTG 58.885 55.000 0.00 0.00 34.45 4.61
3060 3172 1.153549 CGAGTCTGCCTTAGGGTGC 60.154 63.158 0.00 0.00 34.45 5.01
3061 3173 1.222113 GAGTCTGCCTTAGGGTGCC 59.778 63.158 0.00 0.00 34.45 5.01
3062 3174 1.538876 AGTCTGCCTTAGGGTGCCA 60.539 57.895 0.00 0.00 34.45 4.92
3063 3175 1.377333 GTCTGCCTTAGGGTGCCAC 60.377 63.158 0.00 0.00 34.45 5.01
3064 3176 1.845664 TCTGCCTTAGGGTGCCACA 60.846 57.895 0.00 0.00 34.45 4.17
3065 3177 1.074775 CTGCCTTAGGGTGCCACAA 59.925 57.895 0.00 0.00 34.45 3.33
3066 3178 0.962356 CTGCCTTAGGGTGCCACAAG 60.962 60.000 0.00 0.00 34.45 3.16
3067 3179 1.378762 GCCTTAGGGTGCCACAAGA 59.621 57.895 0.00 0.00 34.45 3.02
3068 3180 0.960861 GCCTTAGGGTGCCACAAGAC 60.961 60.000 0.00 0.00 34.45 3.01
3069 3181 0.693049 CCTTAGGGTGCCACAAGACT 59.307 55.000 0.00 0.00 0.00 3.24
3070 3182 1.611673 CCTTAGGGTGCCACAAGACTG 60.612 57.143 0.00 0.00 0.00 3.51
3071 3183 0.250727 TTAGGGTGCCACAAGACTGC 60.251 55.000 0.00 0.00 0.00 4.40
3072 3184 1.414866 TAGGGTGCCACAAGACTGCA 61.415 55.000 0.00 0.00 0.00 4.41
3083 3195 1.747355 CAAGACTGCACCCATCCATTC 59.253 52.381 0.00 0.00 0.00 2.67
3089 3201 0.249868 GCACCCATCCATTCGATCGA 60.250 55.000 15.15 15.15 0.00 3.59
3093 3205 1.633561 CCATCCATTCGATCGATCCG 58.366 55.000 20.18 14.15 0.00 4.18
3094 3206 0.994995 CATCCATTCGATCGATCCGC 59.005 55.000 20.18 0.00 0.00 5.54
3095 3207 0.108615 ATCCATTCGATCGATCCGCC 60.109 55.000 20.18 0.00 0.00 6.13
3096 3208 1.179174 TCCATTCGATCGATCCGCCT 61.179 55.000 20.18 0.00 0.00 5.52
3097 3209 0.734253 CCATTCGATCGATCCGCCTC 60.734 60.000 20.18 0.00 0.00 4.70
3098 3210 0.242286 CATTCGATCGATCCGCCTCT 59.758 55.000 20.18 0.00 0.00 3.69
3099 3211 0.962489 ATTCGATCGATCCGCCTCTT 59.038 50.000 20.18 0.00 0.00 2.85
3100 3212 0.030773 TTCGATCGATCCGCCTCTTG 59.969 55.000 20.18 3.23 0.00 3.02
3101 3213 1.101635 TCGATCGATCCGCCTCTTGT 61.102 55.000 19.51 0.00 0.00 3.16
3102 3214 0.661780 CGATCGATCCGCCTCTTGTC 60.662 60.000 19.51 0.00 0.00 3.18
3103 3215 0.671251 GATCGATCCGCCTCTTGTCT 59.329 55.000 14.76 0.00 0.00 3.41
3104 3216 0.387202 ATCGATCCGCCTCTTGTCTG 59.613 55.000 0.00 0.00 0.00 3.51
3105 3217 0.965866 TCGATCCGCCTCTTGTCTGT 60.966 55.000 0.00 0.00 0.00 3.41
3106 3218 0.738975 CGATCCGCCTCTTGTCTGTA 59.261 55.000 0.00 0.00 0.00 2.74
3107 3219 1.134367 CGATCCGCCTCTTGTCTGTAA 59.866 52.381 0.00 0.00 0.00 2.41
3108 3220 2.541556 GATCCGCCTCTTGTCTGTAAC 58.458 52.381 0.00 0.00 0.00 2.50
3109 3221 1.629043 TCCGCCTCTTGTCTGTAACT 58.371 50.000 0.00 0.00 0.00 2.24
3110 3222 1.968493 TCCGCCTCTTGTCTGTAACTT 59.032 47.619 0.00 0.00 0.00 2.66
3111 3223 3.159472 TCCGCCTCTTGTCTGTAACTTA 58.841 45.455 0.00 0.00 0.00 2.24
3112 3224 3.575256 TCCGCCTCTTGTCTGTAACTTAA 59.425 43.478 0.00 0.00 0.00 1.85
3113 3225 4.222145 TCCGCCTCTTGTCTGTAACTTAAT 59.778 41.667 0.00 0.00 0.00 1.40
3114 3226 4.935808 CCGCCTCTTGTCTGTAACTTAATT 59.064 41.667 0.00 0.00 0.00 1.40
3115 3227 6.071221 TCCGCCTCTTGTCTGTAACTTAATTA 60.071 38.462 0.00 0.00 0.00 1.40
3116 3228 6.761714 CCGCCTCTTGTCTGTAACTTAATTAT 59.238 38.462 0.00 0.00 0.00 1.28
3117 3229 7.280205 CCGCCTCTTGTCTGTAACTTAATTATT 59.720 37.037 0.00 0.00 0.00 1.40
3118 3230 8.665685 CGCCTCTTGTCTGTAACTTAATTATTT 58.334 33.333 0.00 0.00 0.00 1.40
3165 3277 6.818142 TCGATCTGATGCATCTTCAGTTTTAA 59.182 34.615 26.32 2.75 41.13 1.52
3195 3307 3.623060 ACGAATATTTCTGTCAGCGCAAT 59.377 39.130 11.47 0.43 0.00 3.56
3224 3336 5.679638 GCAGACAACAGAGTTTGGAAATGTT 60.680 40.000 0.00 0.00 34.56 2.71
3226 3338 6.473455 CAGACAACAGAGTTTGGAAATGTTTC 59.527 38.462 0.00 0.00 32.01 2.78
3227 3339 5.339990 ACAACAGAGTTTGGAAATGTTTCG 58.660 37.500 0.00 0.00 38.06 3.46
3228 3340 5.105917 ACAACAGAGTTTGGAAATGTTTCGT 60.106 36.000 0.00 0.00 38.06 3.85
3229 3341 5.169836 ACAGAGTTTGGAAATGTTTCGTC 57.830 39.130 0.00 0.00 38.06 4.20
3230 3342 4.036380 ACAGAGTTTGGAAATGTTTCGTCC 59.964 41.667 0.00 0.00 38.06 4.79
3231 3343 4.275936 CAGAGTTTGGAAATGTTTCGTCCT 59.724 41.667 0.00 0.00 38.06 3.85
3233 3345 5.701290 AGAGTTTGGAAATGTTTCGTCCTAG 59.299 40.000 0.00 0.00 38.06 3.02
3234 3346 5.374071 AGTTTGGAAATGTTTCGTCCTAGT 58.626 37.500 0.00 0.00 38.06 2.57
3235 3347 6.527423 AGTTTGGAAATGTTTCGTCCTAGTA 58.473 36.000 0.00 0.00 38.06 1.82
3237 3349 7.499895 AGTTTGGAAATGTTTCGTCCTAGTAAA 59.500 33.333 0.00 0.00 38.06 2.01
3238 3350 6.790285 TGGAAATGTTTCGTCCTAGTAAAC 57.210 37.500 0.00 0.00 38.06 2.01
3239 3351 5.702209 TGGAAATGTTTCGTCCTAGTAAACC 59.298 40.000 0.00 0.00 38.06 3.27
3240 3352 5.936372 GGAAATGTTTCGTCCTAGTAAACCT 59.064 40.000 0.00 0.00 38.06 3.50
3243 3355 4.886579 TGTTTCGTCCTAGTAAACCTTCC 58.113 43.478 0.00 0.00 33.21 3.46
3244 3356 4.248859 GTTTCGTCCTAGTAAACCTTCCC 58.751 47.826 0.00 0.00 0.00 3.97
3246 3358 4.591321 TCGTCCTAGTAAACCTTCCCTA 57.409 45.455 0.00 0.00 0.00 3.53
3248 3360 4.891756 TCGTCCTAGTAAACCTTCCCTATG 59.108 45.833 0.00 0.00 0.00 2.23
3249 3361 4.501058 CGTCCTAGTAAACCTTCCCTATGC 60.501 50.000 0.00 0.00 0.00 3.14
3250 3362 4.407945 GTCCTAGTAAACCTTCCCTATGCA 59.592 45.833 0.00 0.00 0.00 3.96
3256 3371 0.475906 ACCTTCCCTATGCATGCCTC 59.524 55.000 16.68 0.00 0.00 4.70
3261 3376 0.602106 CCCTATGCATGCCTCGTCTG 60.602 60.000 16.68 0.00 0.00 3.51
3263 3378 0.602106 CTATGCATGCCTCGTCTGGG 60.602 60.000 16.68 0.00 0.00 4.45
3275 3390 0.934901 CGTCTGGGTCGATGTATGCG 60.935 60.000 0.00 0.00 0.00 4.73
3295 3410 3.923412 CGTGCATGTATACTTTTGGACG 58.077 45.455 22.49 22.49 44.95 4.79
3299 3414 4.757657 TGCATGTATACTTTTGGACGTGTT 59.242 37.500 4.17 0.00 32.51 3.32
3314 3429 3.641441 CGTGTTTAATTTTGACGCACG 57.359 42.857 0.00 0.00 41.26 5.34
3316 3431 4.202326 CGTGTTTAATTTTGACGCACGTA 58.798 39.130 0.00 0.00 41.86 3.57
3321 3436 3.515071 AATTTTGACGCACGTACTGAC 57.485 42.857 0.00 0.00 0.00 3.51
3331 3467 2.668457 GCACGTACTGACTGATTGGAAG 59.332 50.000 0.00 0.00 0.00 3.46
3332 3468 3.861131 GCACGTACTGACTGATTGGAAGT 60.861 47.826 0.00 0.00 0.00 3.01
3348 3484 0.955428 AAGTGCATCGGCGTCATTGT 60.955 50.000 6.85 0.00 45.35 2.71
3351 3487 0.595588 TGCATCGGCGTCATTGTTTT 59.404 45.000 6.85 0.00 45.35 2.43
3353 3489 1.400888 GCATCGGCGTCATTGTTTTGA 60.401 47.619 6.85 0.00 0.00 2.69
3363 3499 6.746104 CGTCATTGTTTTGATGCTGTAAAA 57.254 33.333 0.00 0.00 0.00 1.52
3364 3500 7.337150 CGTCATTGTTTTGATGCTGTAAAAT 57.663 32.000 0.00 0.00 0.00 1.82
3365 3501 7.221970 CGTCATTGTTTTGATGCTGTAAAATG 58.778 34.615 0.00 0.00 0.00 2.32
3366 3502 7.096106 CGTCATTGTTTTGATGCTGTAAAATGT 60.096 33.333 0.00 0.00 0.00 2.71
3367 3503 8.550376 GTCATTGTTTTGATGCTGTAAAATGTT 58.450 29.630 0.00 0.00 0.00 2.71
3368 3504 9.107177 TCATTGTTTTGATGCTGTAAAATGTTT 57.893 25.926 0.00 0.00 0.00 2.83
3369 3505 9.372541 CATTGTTTTGATGCTGTAAAATGTTTC 57.627 29.630 0.00 0.00 0.00 2.78
3370 3506 7.475771 TGTTTTGATGCTGTAAAATGTTTCC 57.524 32.000 0.00 0.00 0.00 3.13
3371 3507 7.044181 TGTTTTGATGCTGTAAAATGTTTCCA 58.956 30.769 0.00 0.00 0.00 3.53
3372 3508 7.224362 TGTTTTGATGCTGTAAAATGTTTCCAG 59.776 33.333 0.00 0.00 0.00 3.86
3373 3509 5.389859 TGATGCTGTAAAATGTTTCCAGG 57.610 39.130 0.00 0.00 0.00 4.45
3374 3510 3.658757 TGCTGTAAAATGTTTCCAGGC 57.341 42.857 0.00 0.00 0.00 4.85
3375 3511 3.230134 TGCTGTAAAATGTTTCCAGGCT 58.770 40.909 0.00 0.00 0.00 4.58
3376 3512 3.005684 TGCTGTAAAATGTTTCCAGGCTG 59.994 43.478 7.75 7.75 0.00 4.85
3377 3513 3.578688 CTGTAAAATGTTTCCAGGCTGC 58.421 45.455 9.56 0.00 0.00 5.25
3396 3532 0.804364 CGCAGCTGGTGAAAATGCTA 59.196 50.000 17.12 0.00 34.75 3.49
3397 3533 1.466360 CGCAGCTGGTGAAAATGCTAC 60.466 52.381 17.12 0.00 34.75 3.58
3398 3534 1.815003 GCAGCTGGTGAAAATGCTACT 59.185 47.619 17.12 0.00 34.10 2.57
3399 3535 3.009723 GCAGCTGGTGAAAATGCTACTA 58.990 45.455 17.12 0.00 34.10 1.82
3400 3536 3.181506 GCAGCTGGTGAAAATGCTACTAC 60.182 47.826 17.12 0.00 34.10 2.73
3401 3537 4.256920 CAGCTGGTGAAAATGCTACTACT 58.743 43.478 5.57 0.00 34.10 2.57
3402 3538 5.419542 CAGCTGGTGAAAATGCTACTACTA 58.580 41.667 5.57 0.00 34.10 1.82
3407 3543 7.169982 GCTGGTGAAAATGCTACTACTATACTG 59.830 40.741 0.00 0.00 0.00 2.74
3408 3544 8.301252 TGGTGAAAATGCTACTACTATACTGA 57.699 34.615 0.00 0.00 0.00 3.41
3427 3563 1.992667 GAAGGCGTTGCTTTTATTGCC 59.007 47.619 0.00 0.00 42.76 4.52
3428 3564 3.812577 GGCGTTGCTTTTATTGCCT 57.187 47.368 0.00 0.00 39.38 4.75
3429 3565 1.629013 GGCGTTGCTTTTATTGCCTC 58.371 50.000 0.00 0.00 39.38 4.70
3430 3566 1.259316 GCGTTGCTTTTATTGCCTCG 58.741 50.000 0.00 0.00 0.00 4.63
3444 3617 3.175240 CTCGGCAGCAGAACGTCG 61.175 66.667 0.00 0.00 0.00 5.12
3447 3620 3.121030 GGCAGCAGAACGTCGCAT 61.121 61.111 7.24 0.00 0.00 4.73
3455 3628 4.209080 CAGCAGAACGTCGCATTTATCATA 59.791 41.667 7.24 0.00 0.00 2.15
3463 3636 7.940178 ACGTCGCATTTATCATAGAACATTA 57.060 32.000 0.00 0.00 0.00 1.90
3464 3637 8.360325 ACGTCGCATTTATCATAGAACATTAA 57.640 30.769 0.00 0.00 0.00 1.40
3527 3712 2.422479 CGTAGTACTGTAGCTTCTGCCA 59.578 50.000 5.39 0.00 40.80 4.92
3531 3716 2.867109 ACTGTAGCTTCTGCCACAAT 57.133 45.000 0.00 0.00 40.03 2.71
3542 3727 2.101783 CTGCCACAATGGGAAAGCATA 58.898 47.619 0.00 0.00 37.44 3.14
3550 3735 6.491062 CCACAATGGGAAAGCATATGATAGAA 59.509 38.462 6.97 0.00 32.67 2.10
3554 3739 8.799367 CAATGGGAAAGCATATGATAGAAATCA 58.201 33.333 6.97 0.00 46.01 2.57
3571 3756 2.203470 TCAGAACAGCAATGCATGGA 57.797 45.000 8.35 0.00 0.00 3.41
3572 3757 1.814394 TCAGAACAGCAATGCATGGAC 59.186 47.619 8.35 0.00 0.00 4.02
3573 3758 1.135199 CAGAACAGCAATGCATGGACC 60.135 52.381 8.35 0.00 0.00 4.46
3574 3759 0.889994 GAACAGCAATGCATGGACCA 59.110 50.000 8.35 0.00 0.00 4.02
3575 3760 0.604578 AACAGCAATGCATGGACCAC 59.395 50.000 8.35 0.00 0.00 4.16
3577 3762 0.604073 CAGCAATGCATGGACCACAA 59.396 50.000 8.35 0.00 0.00 3.33
3578 3763 1.001068 CAGCAATGCATGGACCACAAA 59.999 47.619 8.35 0.00 0.00 2.83
3583 3773 4.097741 GCAATGCATGGACCACAAAGTATA 59.902 41.667 4.87 0.00 0.00 1.47
3591 3781 8.034804 GCATGGACCACAAAGTATAAAATTTCT 58.965 33.333 0.00 0.00 0.00 2.52
3596 3786 8.385898 ACCACAAAGTATAAAATTTCTGTCGA 57.614 30.769 0.00 0.00 0.00 4.20
3628 3818 1.537202 CTACCAGAGCAGCAACCAAAC 59.463 52.381 0.00 0.00 0.00 2.93
3637 3827 0.396974 AGCAACCAAACTTCCAGCCA 60.397 50.000 0.00 0.00 0.00 4.75
3655 3845 1.302511 AAAAGCTCCATCGCCACGT 60.303 52.632 0.00 0.00 0.00 4.49
3657 3847 1.577328 AAAGCTCCATCGCCACGTTG 61.577 55.000 0.00 0.00 0.00 4.10
3683 3873 6.932400 CCTACTACTCCTCGCCTATATATCAG 59.068 46.154 0.00 0.00 0.00 2.90
3694 3892 5.864474 CGCCTATATATCAGAACAGAACACC 59.136 44.000 0.00 0.00 0.00 4.16
3697 3895 8.531982 GCCTATATATCAGAACAGAACACCATA 58.468 37.037 0.00 0.00 0.00 2.74
3712 3910 7.850982 CAGAACACCATAGATAATACGCAAAAC 59.149 37.037 0.00 0.00 0.00 2.43
3717 3915 9.864034 CACCATAGATAATACGCAAAACTTAAG 57.136 33.333 0.00 0.00 0.00 1.85
3741 3944 2.512515 GTGAGGCCCGATGCTCAC 60.513 66.667 0.00 1.12 39.32 3.51
3743 3946 3.785859 GAGGCCCGATGCTCACCA 61.786 66.667 0.00 0.00 40.92 4.17
3774 3977 6.868339 GTGAAAGACATGGATTCGGAAATTTT 59.132 34.615 0.00 0.00 0.00 1.82
3775 3978 8.026607 GTGAAAGACATGGATTCGGAAATTTTA 58.973 33.333 0.00 0.00 0.00 1.52
3802 4005 2.351726 GCACCGGAGATGATTACACAAC 59.648 50.000 9.46 0.00 0.00 3.32
3809 4012 5.245531 GGAGATGATTACACAACTGGAACA 58.754 41.667 0.00 0.00 0.00 3.18
3817 4020 4.108699 ACACAACTGGAACACATTGTTG 57.891 40.909 0.00 0.00 41.28 3.33
3818 4021 3.761218 ACACAACTGGAACACATTGTTGA 59.239 39.130 10.50 0.00 41.28 3.18
3819 4022 4.402155 ACACAACTGGAACACATTGTTGAT 59.598 37.500 10.50 0.00 41.28 2.57
3820 4023 5.105392 ACACAACTGGAACACATTGTTGATT 60.105 36.000 10.50 0.00 41.28 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
661 684 1.674057 CTTGAGAGGGGTTGAGCGT 59.326 57.895 0.00 0.00 0.00 5.07
756 780 0.776810 TTCACATCTGGCCTTTGGGA 59.223 50.000 3.32 2.24 33.58 4.37
757 781 1.631405 TTTCACATCTGGCCTTTGGG 58.369 50.000 3.32 0.00 0.00 4.12
758 782 3.368739 GGATTTTCACATCTGGCCTTTGG 60.369 47.826 3.32 0.00 0.00 3.28
759 783 3.512724 AGGATTTTCACATCTGGCCTTTG 59.487 43.478 3.32 0.95 0.00 2.77
760 784 3.782992 AGGATTTTCACATCTGGCCTTT 58.217 40.909 3.32 0.00 0.00 3.11
761 785 3.463048 AGGATTTTCACATCTGGCCTT 57.537 42.857 3.32 0.00 0.00 4.35
762 786 3.011032 AGAAGGATTTTCACATCTGGCCT 59.989 43.478 3.32 0.00 0.00 5.19
763 787 3.359950 AGAAGGATTTTCACATCTGGCC 58.640 45.455 0.00 0.00 0.00 5.36
764 788 4.012374 TGAGAAGGATTTTCACATCTGGC 58.988 43.478 0.00 0.00 0.00 4.85
765 789 5.123502 CACTGAGAAGGATTTTCACATCTGG 59.876 44.000 0.00 0.00 0.00 3.86
766 790 5.123502 CCACTGAGAAGGATTTTCACATCTG 59.876 44.000 0.00 0.00 0.00 2.90
767 791 5.251764 CCACTGAGAAGGATTTTCACATCT 58.748 41.667 0.00 0.00 0.00 2.90
768 792 4.142513 GCCACTGAGAAGGATTTTCACATC 60.143 45.833 0.16 0.00 0.00 3.06
769 793 3.760684 GCCACTGAGAAGGATTTTCACAT 59.239 43.478 0.16 0.00 0.00 3.21
770 794 3.149196 GCCACTGAGAAGGATTTTCACA 58.851 45.455 0.16 0.00 0.00 3.58
771 795 2.489722 GGCCACTGAGAAGGATTTTCAC 59.510 50.000 0.00 0.00 0.00 3.18
772 796 2.376518 AGGCCACTGAGAAGGATTTTCA 59.623 45.455 5.01 0.00 0.00 2.69
773 797 3.078891 AGGCCACTGAGAAGGATTTTC 57.921 47.619 5.01 0.00 0.00 2.29
774 798 3.330701 TGTAGGCCACTGAGAAGGATTTT 59.669 43.478 5.01 0.00 0.00 1.82
775 799 2.912956 TGTAGGCCACTGAGAAGGATTT 59.087 45.455 5.01 0.00 0.00 2.17
776 800 2.551270 TGTAGGCCACTGAGAAGGATT 58.449 47.619 5.01 0.00 0.00 3.01
777 801 2.254152 TGTAGGCCACTGAGAAGGAT 57.746 50.000 5.01 0.00 0.00 3.24
778 802 2.024176 TTGTAGGCCACTGAGAAGGA 57.976 50.000 5.01 0.00 0.00 3.36
779 803 2.859165 TTTGTAGGCCACTGAGAAGG 57.141 50.000 5.01 0.00 0.00 3.46
780 804 4.389374 TCTTTTTGTAGGCCACTGAGAAG 58.611 43.478 5.01 2.39 0.00 2.85
781 805 4.389374 CTCTTTTTGTAGGCCACTGAGAA 58.611 43.478 5.01 0.00 0.00 2.87
782 806 3.807209 GCTCTTTTTGTAGGCCACTGAGA 60.807 47.826 5.01 0.00 0.00 3.27
783 807 2.485814 GCTCTTTTTGTAGGCCACTGAG 59.514 50.000 5.01 1.96 0.00 3.35
784 808 2.106511 AGCTCTTTTTGTAGGCCACTGA 59.893 45.455 5.01 0.00 0.00 3.41
785 809 2.508526 AGCTCTTTTTGTAGGCCACTG 58.491 47.619 5.01 0.00 0.00 3.66
786 810 2.887152 CAAGCTCTTTTTGTAGGCCACT 59.113 45.455 5.01 0.00 0.00 4.00
787 811 2.029918 CCAAGCTCTTTTTGTAGGCCAC 60.030 50.000 5.01 1.31 0.00 5.01
788 812 2.238521 CCAAGCTCTTTTTGTAGGCCA 58.761 47.619 5.01 0.00 0.00 5.36
789 813 1.546029 CCCAAGCTCTTTTTGTAGGCC 59.454 52.381 0.00 0.00 0.00 5.19
790 814 2.514803 TCCCAAGCTCTTTTTGTAGGC 58.485 47.619 0.00 0.00 0.00 3.93
791 815 3.445096 CCATCCCAAGCTCTTTTTGTAGG 59.555 47.826 0.00 0.00 0.00 3.18
792 816 3.445096 CCCATCCCAAGCTCTTTTTGTAG 59.555 47.826 0.00 0.00 0.00 2.74
793 817 3.430453 CCCATCCCAAGCTCTTTTTGTA 58.570 45.455 0.00 0.00 0.00 2.41
794 818 2.250924 CCCATCCCAAGCTCTTTTTGT 58.749 47.619 0.00 0.00 0.00 2.83
795 819 1.551883 CCCCATCCCAAGCTCTTTTTG 59.448 52.381 0.00 0.00 0.00 2.44
796 820 1.553184 CCCCCATCCCAAGCTCTTTTT 60.553 52.381 0.00 0.00 0.00 1.94
797 821 0.041684 CCCCCATCCCAAGCTCTTTT 59.958 55.000 0.00 0.00 0.00 2.27
798 822 0.850883 TCCCCCATCCCAAGCTCTTT 60.851 55.000 0.00 0.00 0.00 2.52
799 823 0.628668 ATCCCCCATCCCAAGCTCTT 60.629 55.000 0.00 0.00 0.00 2.85
800 824 0.271927 TATCCCCCATCCCAAGCTCT 59.728 55.000 0.00 0.00 0.00 4.09
801 825 0.402121 GTATCCCCCATCCCAAGCTC 59.598 60.000 0.00 0.00 0.00 4.09
802 826 1.068352 GGTATCCCCCATCCCAAGCT 61.068 60.000 0.00 0.00 0.00 3.74
803 827 1.068352 AGGTATCCCCCATCCCAAGC 61.068 60.000 0.00 0.00 0.00 4.01
804 828 1.068121 GAGGTATCCCCCATCCCAAG 58.932 60.000 0.00 0.00 0.00 3.61
805 829 0.653397 AGAGGTATCCCCCATCCCAA 59.347 55.000 0.00 0.00 0.00 4.12
806 830 0.193574 GAGAGGTATCCCCCATCCCA 59.806 60.000 0.00 0.00 0.00 4.37
807 831 0.193574 TGAGAGGTATCCCCCATCCC 59.806 60.000 0.00 0.00 0.00 3.85
808 832 1.912043 CATGAGAGGTATCCCCCATCC 59.088 57.143 0.00 0.00 0.00 3.51
809 833 1.280421 GCATGAGAGGTATCCCCCATC 59.720 57.143 0.00 0.00 0.00 3.51
810 834 1.132267 AGCATGAGAGGTATCCCCCAT 60.132 52.381 0.00 0.00 0.00 4.00
811 835 0.268869 AGCATGAGAGGTATCCCCCA 59.731 55.000 0.00 0.00 0.00 4.96
812 836 1.072965 CAAGCATGAGAGGTATCCCCC 59.927 57.143 0.00 0.00 0.00 5.40
813 837 1.544314 GCAAGCATGAGAGGTATCCCC 60.544 57.143 0.00 0.00 0.00 4.81
814 838 1.875576 CGCAAGCATGAGAGGTATCCC 60.876 57.143 0.00 0.00 0.00 3.85
815 839 1.069204 TCGCAAGCATGAGAGGTATCC 59.931 52.381 0.00 0.00 31.33 2.59
816 840 2.402305 CTCGCAAGCATGAGAGGTATC 58.598 52.381 14.00 0.00 46.20 2.24
817 841 2.522836 CTCGCAAGCATGAGAGGTAT 57.477 50.000 14.00 0.00 46.20 2.73
819 843 4.928398 CTCGCAAGCATGAGAGGT 57.072 55.556 14.00 0.00 46.20 3.85
822 846 2.165380 GCAACTCGCAAGCATGAGA 58.835 52.632 0.00 0.00 41.79 3.27
823 847 4.759564 GCAACTCGCAAGCATGAG 57.240 55.556 0.00 0.00 41.79 2.90
832 856 4.875544 TCAATAATACCTTGCAACTCGC 57.124 40.909 0.00 0.00 42.89 5.03
833 857 5.670097 CGATCAATAATACCTTGCAACTCG 58.330 41.667 0.00 0.00 0.00 4.18
834 858 5.444122 GCGATCAATAATACCTTGCAACTC 58.556 41.667 0.00 0.00 0.00 3.01
835 859 4.275936 GGCGATCAATAATACCTTGCAACT 59.724 41.667 0.00 0.00 0.00 3.16
836 860 4.275936 AGGCGATCAATAATACCTTGCAAC 59.724 41.667 0.00 0.00 0.00 4.17
837 861 4.460263 AGGCGATCAATAATACCTTGCAA 58.540 39.130 0.00 0.00 0.00 4.08
838 862 4.085357 AGGCGATCAATAATACCTTGCA 57.915 40.909 0.00 0.00 0.00 4.08
839 863 5.932303 TCTAAGGCGATCAATAATACCTTGC 59.068 40.000 0.00 0.00 35.67 4.01
840 864 7.378966 TCTCTAAGGCGATCAATAATACCTTG 58.621 38.462 0.00 0.00 35.67 3.61
841 865 7.540474 TCTCTAAGGCGATCAATAATACCTT 57.460 36.000 0.00 0.00 37.61 3.50
842 866 6.350612 GCTCTCTAAGGCGATCAATAATACCT 60.351 42.308 0.00 0.00 0.00 3.08
843 867 5.808030 GCTCTCTAAGGCGATCAATAATACC 59.192 44.000 0.00 0.00 0.00 2.73
844 868 6.309251 GTGCTCTCTAAGGCGATCAATAATAC 59.691 42.308 0.00 0.00 0.00 1.89
845 869 6.390721 GTGCTCTCTAAGGCGATCAATAATA 58.609 40.000 0.00 0.00 0.00 0.98
846 870 5.233988 GTGCTCTCTAAGGCGATCAATAAT 58.766 41.667 0.00 0.00 0.00 1.28
847 871 4.501571 GGTGCTCTCTAAGGCGATCAATAA 60.502 45.833 0.00 0.00 0.00 1.40
848 872 3.005897 GGTGCTCTCTAAGGCGATCAATA 59.994 47.826 0.00 0.00 0.00 1.90
849 873 2.224161 GGTGCTCTCTAAGGCGATCAAT 60.224 50.000 0.00 0.00 0.00 2.57
850 874 1.137086 GGTGCTCTCTAAGGCGATCAA 59.863 52.381 0.00 0.00 0.00 2.57
851 875 0.747255 GGTGCTCTCTAAGGCGATCA 59.253 55.000 0.00 0.00 0.00 2.92
852 876 1.000717 GAGGTGCTCTCTAAGGCGATC 60.001 57.143 0.00 0.00 39.38 3.69
853 877 1.036707 GAGGTGCTCTCTAAGGCGAT 58.963 55.000 0.00 0.00 39.38 4.58
854 878 0.323451 TGAGGTGCTCTCTAAGGCGA 60.323 55.000 8.63 0.00 42.86 5.54
855 879 0.532573 TTGAGGTGCTCTCTAAGGCG 59.467 55.000 8.63 0.00 42.86 5.52
856 880 2.289694 TGTTTGAGGTGCTCTCTAAGGC 60.290 50.000 8.63 0.00 42.86 4.35
857 881 3.685139 TGTTTGAGGTGCTCTCTAAGG 57.315 47.619 8.63 0.00 42.86 2.69
858 882 6.634805 TCTTATGTTTGAGGTGCTCTCTAAG 58.365 40.000 8.63 7.69 42.86 2.18
859 883 6.351371 CCTCTTATGTTTGAGGTGCTCTCTAA 60.351 42.308 8.63 5.23 43.49 2.10
860 884 5.127845 CCTCTTATGTTTGAGGTGCTCTCTA 59.872 44.000 8.63 0.00 43.49 2.43
861 885 4.081198 CCTCTTATGTTTGAGGTGCTCTCT 60.081 45.833 8.63 0.00 43.49 3.10
862 886 4.187694 CCTCTTATGTTTGAGGTGCTCTC 58.812 47.826 0.00 1.50 43.49 3.20
863 887 4.213564 CCTCTTATGTTTGAGGTGCTCT 57.786 45.455 0.00 0.00 43.49 4.09
890 914 8.883731 GCAAGCATTAGTGAGTATAGAAGAAAA 58.116 33.333 0.00 0.00 0.00 2.29
891 915 8.040727 TGCAAGCATTAGTGAGTATAGAAGAAA 58.959 33.333 0.00 0.00 0.00 2.52
892 916 7.555965 TGCAAGCATTAGTGAGTATAGAAGAA 58.444 34.615 0.00 0.00 0.00 2.52
893 917 7.112452 TGCAAGCATTAGTGAGTATAGAAGA 57.888 36.000 0.00 0.00 0.00 2.87
894 918 7.095313 CCATGCAAGCATTAGTGAGTATAGAAG 60.095 40.741 4.52 0.00 33.90 2.85
895 919 6.707608 CCATGCAAGCATTAGTGAGTATAGAA 59.292 38.462 4.52 0.00 33.90 2.10
896 920 6.226052 CCATGCAAGCATTAGTGAGTATAGA 58.774 40.000 4.52 0.00 33.90 1.98
897 921 5.410746 CCCATGCAAGCATTAGTGAGTATAG 59.589 44.000 4.52 0.00 33.90 1.31
898 922 5.308014 CCCATGCAAGCATTAGTGAGTATA 58.692 41.667 4.52 0.00 33.90 1.47
899 923 4.139786 CCCATGCAAGCATTAGTGAGTAT 58.860 43.478 4.52 0.00 33.90 2.12
900 924 3.544684 CCCATGCAAGCATTAGTGAGTA 58.455 45.455 4.52 0.00 33.90 2.59
901 925 2.372264 CCCATGCAAGCATTAGTGAGT 58.628 47.619 4.52 0.00 33.90 3.41
902 926 1.066605 GCCCATGCAAGCATTAGTGAG 59.933 52.381 4.52 0.00 37.47 3.51
903 927 1.105457 GCCCATGCAAGCATTAGTGA 58.895 50.000 4.52 0.00 37.47 3.41
904 928 0.248743 CGCCCATGCAAGCATTAGTG 60.249 55.000 4.52 2.79 37.32 2.74
905 929 0.394216 TCGCCCATGCAAGCATTAGT 60.394 50.000 4.52 0.00 37.32 2.24
906 930 0.309922 CTCGCCCATGCAAGCATTAG 59.690 55.000 4.52 0.90 37.32 1.73
907 931 0.394216 ACTCGCCCATGCAAGCATTA 60.394 50.000 4.52 0.00 37.32 1.90
908 932 1.252904 AACTCGCCCATGCAAGCATT 61.253 50.000 4.52 0.00 37.32 3.56
909 933 1.660560 GAACTCGCCCATGCAAGCAT 61.661 55.000 0.86 0.86 37.32 3.79
910 934 2.282391 AACTCGCCCATGCAAGCA 60.282 55.556 0.00 0.00 37.32 3.91
911 935 1.589716 AAGAACTCGCCCATGCAAGC 61.590 55.000 0.00 0.00 37.32 4.01
912 936 1.737838 TAAGAACTCGCCCATGCAAG 58.262 50.000 0.00 0.00 37.32 4.01
913 937 2.192664 TTAAGAACTCGCCCATGCAA 57.807 45.000 0.00 0.00 37.32 4.08
914 938 2.418368 ATTAAGAACTCGCCCATGCA 57.582 45.000 0.00 0.00 37.32 3.96
915 939 5.215160 CAATTATTAAGAACTCGCCCATGC 58.785 41.667 0.00 0.00 0.00 4.06
916 940 6.183360 ACACAATTATTAAGAACTCGCCCATG 60.183 38.462 0.00 0.00 0.00 3.66
917 941 5.885912 ACACAATTATTAAGAACTCGCCCAT 59.114 36.000 0.00 0.00 0.00 4.00
918 942 5.123186 CACACAATTATTAAGAACTCGCCCA 59.877 40.000 0.00 0.00 0.00 5.36
919 943 5.353123 TCACACAATTATTAAGAACTCGCCC 59.647 40.000 0.00 0.00 0.00 6.13
920 944 6.128391 TGTCACACAATTATTAAGAACTCGCC 60.128 38.462 0.00 0.00 0.00 5.54
921 945 6.827641 TGTCACACAATTATTAAGAACTCGC 58.172 36.000 0.00 0.00 0.00 5.03
922 946 8.279800 TGTTGTCACACAATTATTAAGAACTCG 58.720 33.333 0.00 0.00 40.59 4.18
923 947 9.944663 TTGTTGTCACACAATTATTAAGAACTC 57.055 29.630 0.00 0.00 40.59 3.01
931 955 9.528018 CCTAAAGTTTGTTGTCACACAATTATT 57.472 29.630 0.00 0.00 40.59 1.40
932 956 8.141268 CCCTAAAGTTTGTTGTCACACAATTAT 58.859 33.333 0.00 0.00 40.59 1.28
933 957 7.122948 ACCCTAAAGTTTGTTGTCACACAATTA 59.877 33.333 0.00 0.26 40.59 1.40
934 958 6.071051 ACCCTAAAGTTTGTTGTCACACAATT 60.071 34.615 0.00 0.00 40.59 2.32
935 959 5.420739 ACCCTAAAGTTTGTTGTCACACAAT 59.579 36.000 0.00 0.00 40.59 2.71
936 960 4.767928 ACCCTAAAGTTTGTTGTCACACAA 59.232 37.500 0.00 0.00 35.42 3.33
937 961 4.337145 ACCCTAAAGTTTGTTGTCACACA 58.663 39.130 0.00 0.00 30.32 3.72
938 962 4.976224 ACCCTAAAGTTTGTTGTCACAC 57.024 40.909 0.00 0.00 30.32 3.82
939 963 5.010933 TCAACCCTAAAGTTTGTTGTCACA 58.989 37.500 13.80 0.00 39.22 3.58
940 964 5.570234 TCAACCCTAAAGTTTGTTGTCAC 57.430 39.130 13.80 0.00 39.22 3.67
941 965 5.105675 GGTTCAACCCTAAAGTTTGTTGTCA 60.106 40.000 13.80 3.85 39.22 3.58
942 966 5.126545 AGGTTCAACCCTAAAGTTTGTTGTC 59.873 40.000 1.75 9.85 39.75 3.18
943 967 5.020795 AGGTTCAACCCTAAAGTTTGTTGT 58.979 37.500 1.75 0.26 39.75 3.32
944 968 5.126384 TCAGGTTCAACCCTAAAGTTTGTTG 59.874 40.000 1.75 9.81 39.75 3.33
945 969 5.265989 TCAGGTTCAACCCTAAAGTTTGTT 58.734 37.500 1.75 0.00 39.75 2.83
946 970 4.862371 TCAGGTTCAACCCTAAAGTTTGT 58.138 39.130 1.75 0.00 39.75 2.83
947 971 5.130350 TCTCAGGTTCAACCCTAAAGTTTG 58.870 41.667 1.75 0.00 39.75 2.93
948 972 5.382664 TCTCAGGTTCAACCCTAAAGTTT 57.617 39.130 1.75 0.00 39.75 2.66
949 973 5.584551 ATCTCAGGTTCAACCCTAAAGTT 57.415 39.130 1.75 0.00 39.75 2.66
950 974 5.584551 AATCTCAGGTTCAACCCTAAAGT 57.415 39.130 1.75 0.00 39.75 2.66
951 975 5.416013 GGAAATCTCAGGTTCAACCCTAAAG 59.584 44.000 1.75 0.00 39.75 1.85
952 976 5.074515 AGGAAATCTCAGGTTCAACCCTAAA 59.925 40.000 1.75 0.00 39.75 1.85
953 977 4.601857 AGGAAATCTCAGGTTCAACCCTAA 59.398 41.667 1.75 0.00 39.75 2.69
954 978 4.175962 AGGAAATCTCAGGTTCAACCCTA 58.824 43.478 1.75 0.00 39.75 3.53
955 979 2.989571 AGGAAATCTCAGGTTCAACCCT 59.010 45.455 1.75 0.00 39.75 4.34
956 980 3.441500 AGGAAATCTCAGGTTCAACCC 57.558 47.619 1.75 0.00 39.75 4.11
957 981 4.657013 AGAAGGAAATCTCAGGTTCAACC 58.343 43.478 0.00 0.00 38.99 3.77
958 982 7.929941 AATAGAAGGAAATCTCAGGTTCAAC 57.070 36.000 0.00 0.00 0.00 3.18
963 987 9.634021 GGATTTAAATAGAAGGAAATCTCAGGT 57.366 33.333 0.00 0.00 38.05 4.00
964 988 9.072375 GGGATTTAAATAGAAGGAAATCTCAGG 57.928 37.037 0.00 0.00 38.25 3.86
965 989 9.859152 AGGGATTTAAATAGAAGGAAATCTCAG 57.141 33.333 0.00 0.00 39.99 3.35
972 996 9.916360 GGAAACTAGGGATTTAAATAGAAGGAA 57.084 33.333 0.00 0.00 0.00 3.36
973 997 9.292751 AGGAAACTAGGGATTTAAATAGAAGGA 57.707 33.333 0.00 0.00 40.61 3.36
998 1022 2.779506 GGGGGAATAGAAATGCCGTAG 58.220 52.381 0.00 0.00 30.14 3.51
999 1023 2.943036 GGGGGAATAGAAATGCCGTA 57.057 50.000 0.00 0.00 30.14 4.02
1000 1024 3.821306 GGGGGAATAGAAATGCCGT 57.179 52.632 0.00 0.00 30.14 5.68
1015 1040 4.100189 TGTGTGTTTCAACATTTAAGGGGG 59.900 41.667 0.00 0.00 41.59 5.40
1020 1045 8.193438 TGATGACATGTGTGTTTCAACATTTAA 58.807 29.630 1.15 0.00 41.59 1.52
1022 1047 6.571605 TGATGACATGTGTGTTTCAACATTT 58.428 32.000 1.15 0.00 41.59 2.32
1024 1049 5.771153 TGATGACATGTGTGTTTCAACAT 57.229 34.783 1.15 0.00 41.59 2.71
1026 1051 6.919662 AGAAATGATGACATGTGTGTTTCAAC 59.080 34.615 1.15 0.00 39.09 3.18
1033 1058 5.874895 AGTGAGAAATGATGACATGTGTG 57.125 39.130 1.15 0.00 36.79 3.82
1037 1062 9.205719 CTAAGGATAGTGAGAAATGATGACATG 57.794 37.037 0.00 0.00 36.79 3.21
1038 1063 8.932610 ACTAAGGATAGTGAGAAATGATGACAT 58.067 33.333 0.00 0.00 40.88 3.06
1039 1064 8.311395 ACTAAGGATAGTGAGAAATGATGACA 57.689 34.615 0.00 0.00 40.88 3.58
1048 1073 7.792364 TGAAGGAAACTAAGGATAGTGAGAA 57.208 36.000 0.00 0.00 41.57 2.87
1049 1074 7.979786 ATGAAGGAAACTAAGGATAGTGAGA 57.020 36.000 0.00 0.00 41.57 3.27
1050 1075 9.454859 AAAATGAAGGAAACTAAGGATAGTGAG 57.545 33.333 0.00 0.00 41.57 3.51
1112 1138 8.972127 ACGAGGTATTCATACATTATATCAGCT 58.028 33.333 0.00 0.00 34.98 4.24
1113 1139 9.025020 CACGAGGTATTCATACATTATATCAGC 57.975 37.037 0.00 0.00 34.98 4.26
1145 1186 8.767085 CGACTACAATGAAGTACCTGTTAAAAA 58.233 33.333 0.00 0.00 0.00 1.94
1149 1190 6.822667 TCGACTACAATGAAGTACCTGTTA 57.177 37.500 0.00 0.00 0.00 2.41
1170 1211 3.534554 TGATTGATCCCACAAGTCATCG 58.465 45.455 0.00 0.00 33.22 3.84
1231 1273 6.702282 GTGGTTACTATTACTCTGCTTCCATC 59.298 42.308 0.00 0.00 0.00 3.51
1248 1290 3.070446 TGTCTTCCATTCGTGTGGTTACT 59.930 43.478 8.33 0.00 40.27 2.24
1261 1303 2.590821 GCCAATGGCTATGTCTTCCAT 58.409 47.619 18.47 0.00 46.69 3.41
1275 1317 3.364565 GGTTACTGTAACACACGCCAATG 60.365 47.826 26.67 0.00 40.39 2.82
1279 1321 0.785979 CGGTTACTGTAACACACGCC 59.214 55.000 26.67 11.51 40.39 5.68
1281 1323 1.190763 GCACGGTTACTGTAACACACG 59.809 52.381 26.67 22.66 40.39 4.49
1283 1325 2.867368 CAAGCACGGTTACTGTAACACA 59.133 45.455 26.67 0.00 40.39 3.72
1302 1344 5.245531 AGTCTCTTCATTCGGTAAATGCAA 58.754 37.500 0.00 0.00 43.80 4.08
1312 1354 3.105203 GCTCTTCGAGTCTCTTCATTCG 58.895 50.000 0.00 0.00 31.39 3.34
1321 1363 2.509569 TGAGTCTTGCTCTTCGAGTCT 58.490 47.619 0.00 0.00 44.41 3.24
1322 1364 2.999507 TGAGTCTTGCTCTTCGAGTC 57.000 50.000 0.00 0.00 44.41 3.36
1351 1393 7.548967 TCGGGCCCAAATACTTTATTAAAAAG 58.451 34.615 24.92 0.00 0.00 2.27
1361 1403 3.169908 ACATTTTCGGGCCCAAATACTT 58.830 40.909 24.92 6.19 0.00 2.24
1388 1430 9.366216 GAGTTGAAATTTCTTTAAACTGTGGTT 57.634 29.630 20.32 2.61 43.33 3.67
1420 1462 2.086869 CAATCCGCCACACTTCTTGAT 58.913 47.619 0.00 0.00 0.00 2.57
1482 1526 0.508641 CACTCAACGGTCTTGCTTCG 59.491 55.000 0.00 0.00 0.00 3.79
1536 1580 0.032615 AGGTGGGTTTTGTGGCAGAA 60.033 50.000 0.00 0.00 0.00 3.02
1661 1705 0.312416 CCGAACTAGCTCATCCCTCG 59.688 60.000 0.00 0.00 0.00 4.63
1671 1715 0.947244 CCATCCATTGCCGAACTAGC 59.053 55.000 0.00 0.00 0.00 3.42
1689 1733 2.359848 ACTACAAACAAAACCTTCGGCC 59.640 45.455 0.00 0.00 0.00 6.13
1698 1742 5.685841 GCTCTATGCGAACTACAAACAAAA 58.314 37.500 0.00 0.00 0.00 2.44
1780 1824 3.545703 CATAAGATGTTCTTCCGGGCTT 58.454 45.455 0.00 0.00 37.89 4.35
1923 1970 5.458126 GGATAATCGACGAACCTTGTACTTC 59.542 44.000 0.00 0.00 0.00 3.01
1999 2052 4.274214 CCATGCATATGATCGAACTTGTGT 59.726 41.667 6.97 0.00 36.36 3.72
2031 2084 1.298382 AGGGGAGGAGTGTATTGGGAT 59.702 52.381 0.00 0.00 0.00 3.85
2043 2097 3.720002 ACTTAAACTGTGAAAGGGGAGGA 59.280 43.478 7.16 0.00 0.00 3.71
2088 2142 3.386402 TGGTTTTCAAAAGCGAAGGGAAT 59.614 39.130 7.53 0.00 0.00 3.01
2096 2150 3.303229 GTCAACTGTGGTTTTCAAAAGCG 59.697 43.478 7.53 0.00 32.73 4.68
2097 2151 3.616821 GGTCAACTGTGGTTTTCAAAAGC 59.383 43.478 5.05 5.05 32.73 3.51
2099 2153 4.524714 TGAGGTCAACTGTGGTTTTCAAAA 59.475 37.500 0.00 0.00 32.73 2.44
2109 2163 1.667236 TTGCAGTGAGGTCAACTGTG 58.333 50.000 0.00 0.00 34.27 3.66
2166 2220 1.877258 GCTATGACTGCTGATGAGGCC 60.877 57.143 0.00 0.00 0.00 5.19
2188 2242 2.036604 GCCCTTGAATTTTTGTCGGGAA 59.963 45.455 0.00 0.00 31.85 3.97
2197 2251 3.775261 ATGCACAAGCCCTTGAATTTT 57.225 38.095 14.46 0.00 42.93 1.82
2242 2296 1.154395 GAAAGCTTTGCGTCCGCTC 60.154 57.895 18.30 0.00 42.51 5.03
2310 2364 2.700897 ACCTTCAGGCAACGCTATATCT 59.299 45.455 0.00 0.00 46.39 1.98
2312 2366 4.283467 TGATACCTTCAGGCAACGCTATAT 59.717 41.667 0.00 0.00 46.39 0.86
2318 2372 2.972625 TCTTGATACCTTCAGGCAACG 58.027 47.619 0.00 0.00 46.39 4.10
2331 2385 5.755375 GCGGAGTGATTTCATCTTCTTGATA 59.245 40.000 0.00 0.00 33.36 2.15
2443 2500 5.061560 TCAAGCAATTGTTTTTGTTCGTGTC 59.938 36.000 4.61 0.00 0.00 3.67
2444 2501 4.926238 TCAAGCAATTGTTTTTGTTCGTGT 59.074 33.333 4.61 0.00 0.00 4.49
2449 2506 5.390356 CCAACGTCAAGCAATTGTTTTTGTT 60.390 36.000 4.61 7.46 0.00 2.83
2451 2508 4.328440 TCCAACGTCAAGCAATTGTTTTTG 59.672 37.500 4.61 7.37 0.00 2.44
2458 2515 3.380004 TCTTGTTCCAACGTCAAGCAATT 59.620 39.130 8.62 0.00 38.56 2.32
2460 2517 2.354510 CTCTTGTTCCAACGTCAAGCAA 59.645 45.455 8.62 2.50 38.56 3.91
2517 2574 5.486526 CACTTGAGCTTAAGGATCTTGAGT 58.513 41.667 21.04 0.00 31.94 3.41
2524 2581 2.619074 GCACCCACTTGAGCTTAAGGAT 60.619 50.000 21.04 0.00 31.94 3.24
2525 2582 1.271379 GCACCCACTTGAGCTTAAGGA 60.271 52.381 21.04 0.00 31.94 3.36
2529 2586 0.602638 CACGCACCCACTTGAGCTTA 60.603 55.000 0.00 0.00 0.00 3.09
2530 2587 1.893808 CACGCACCCACTTGAGCTT 60.894 57.895 0.00 0.00 0.00 3.74
2543 2600 3.690280 TGTCGCTCCATCCACGCA 61.690 61.111 0.00 0.00 0.00 5.24
2553 2610 1.435515 CTGGCTCCTAGTGTCGCTC 59.564 63.158 0.00 0.00 0.00 5.03
2556 2613 1.140589 CAGCTGGCTCCTAGTGTCG 59.859 63.158 5.57 0.00 0.00 4.35
2563 2620 0.913451 AATGACTCCAGCTGGCTCCT 60.913 55.000 28.91 14.13 34.44 3.69
2565 2622 1.208052 TGTAATGACTCCAGCTGGCTC 59.792 52.381 28.91 22.95 34.44 4.70
2598 2655 3.799574 GCAGATAGAGTACCTCGAGACGA 60.800 52.174 15.71 0.00 35.36 4.20
2623 2680 3.496160 GGAACTCTTTTGGACTGCCAGTA 60.496 47.826 0.00 0.00 46.91 2.74
2655 2712 1.268283 GGAGGCAGCCTAGTTCACCT 61.268 60.000 16.16 0.00 31.76 4.00
2685 2746 2.111043 AGGTGCAACACGTCCAGG 59.889 61.111 3.64 0.00 39.98 4.45
2691 2752 1.591594 ACTCGACAGGTGCAACACG 60.592 57.895 3.64 7.12 39.98 4.49
2727 2839 2.539476 CCAACCACAACTTTGTCTTGC 58.461 47.619 0.00 0.00 39.91 4.01
2780 2892 3.919216 ACATCTTCCTCAGACTGAAACG 58.081 45.455 6.61 0.00 32.83 3.60
2785 2897 4.440880 GGATTGACATCTTCCTCAGACTG 58.559 47.826 0.00 0.00 32.83 3.51
2789 2901 3.533606 ACGGATTGACATCTTCCTCAG 57.466 47.619 0.00 0.00 0.00 3.35
2792 2904 3.133003 CAGGTACGGATTGACATCTTCCT 59.867 47.826 0.00 0.00 0.00 3.36
2793 2905 3.458189 CAGGTACGGATTGACATCTTCC 58.542 50.000 0.00 0.00 0.00 3.46
2794 2906 2.866762 GCAGGTACGGATTGACATCTTC 59.133 50.000 0.00 0.00 0.00 2.87
2801 2913 1.410004 CTAGGGCAGGTACGGATTGA 58.590 55.000 0.00 0.00 0.00 2.57
2806 2918 0.680061 GAATCCTAGGGCAGGTACGG 59.320 60.000 9.46 0.00 45.71 4.02
2820 2932 5.688807 TCTCCAATCTTTCCAGATGAATCC 58.311 41.667 0.00 0.00 39.00 3.01
2821 2933 5.764192 CCTCTCCAATCTTTCCAGATGAATC 59.236 44.000 0.00 0.00 39.00 2.52
2825 2937 4.197750 CACCTCTCCAATCTTTCCAGATG 58.802 47.826 0.00 0.00 39.00 2.90
2826 2938 3.371380 GCACCTCTCCAATCTTTCCAGAT 60.371 47.826 0.00 0.00 42.05 2.90
2827 2939 2.026822 GCACCTCTCCAATCTTTCCAGA 60.027 50.000 0.00 0.00 0.00 3.86
2846 2958 0.613260 CCAAGCCTACTGGTGTAGCA 59.387 55.000 0.00 0.00 43.51 3.49
2847 2959 0.902531 TCCAAGCCTACTGGTGTAGC 59.097 55.000 0.00 0.00 43.51 3.58
2848 2960 2.093973 CACTCCAAGCCTACTGGTGTAG 60.094 54.545 0.00 0.00 44.23 2.74
2849 2961 1.899814 CACTCCAAGCCTACTGGTGTA 59.100 52.381 0.00 0.00 35.27 2.90
2850 2962 0.687354 CACTCCAAGCCTACTGGTGT 59.313 55.000 0.00 0.00 35.27 4.16
2851 2963 0.674895 GCACTCCAAGCCTACTGGTG 60.675 60.000 0.00 0.00 35.27 4.17
2853 2965 4.625800 GCACTCCAAGCCTACTGG 57.374 61.111 0.00 0.00 0.00 4.00
2860 2972 4.357279 AGGGCAGGCACTCCAAGC 62.357 66.667 0.00 0.00 34.60 4.01
2861 2973 2.360852 CAGGGCAGGCACTCCAAG 60.361 66.667 0.00 0.00 34.60 3.61
2862 2974 4.666253 GCAGGGCAGGCACTCCAA 62.666 66.667 0.00 0.00 34.60 3.53
2865 2977 4.792804 GAGGCAGGGCAGGCACTC 62.793 72.222 0.00 4.50 34.60 3.51
2872 2984 0.323725 GATTTTCTGGAGGCAGGGCA 60.324 55.000 0.00 0.00 0.00 5.36
2873 2985 1.379642 CGATTTTCTGGAGGCAGGGC 61.380 60.000 0.00 0.00 0.00 5.19
2874 2986 0.253044 TCGATTTTCTGGAGGCAGGG 59.747 55.000 0.00 0.00 0.00 4.45
2875 2987 2.012673 CTTCGATTTTCTGGAGGCAGG 58.987 52.381 0.00 0.00 0.00 4.85
2877 2989 2.224523 ACACTTCGATTTTCTGGAGGCA 60.225 45.455 0.00 0.00 0.00 4.75
2878 2990 2.427506 ACACTTCGATTTTCTGGAGGC 58.572 47.619 0.00 0.00 0.00 4.70
2879 2991 4.065088 TGAACACTTCGATTTTCTGGAGG 58.935 43.478 0.00 0.00 0.00 4.30
2881 2993 3.493129 CGTGAACACTTCGATTTTCTGGA 59.507 43.478 3.51 0.00 0.00 3.86
2882 2994 3.493129 TCGTGAACACTTCGATTTTCTGG 59.507 43.478 3.51 0.00 0.00 3.86
2884 2996 3.741344 CCTCGTGAACACTTCGATTTTCT 59.259 43.478 3.51 0.00 33.26 2.52
2886 2998 3.463944 ACCTCGTGAACACTTCGATTTT 58.536 40.909 3.51 0.00 33.26 1.82
2889 3001 2.094854 GGTACCTCGTGAACACTTCGAT 60.095 50.000 4.06 0.00 33.26 3.59
2890 3002 1.267806 GGTACCTCGTGAACACTTCGA 59.732 52.381 4.06 0.00 0.00 3.71
2891 3003 1.694639 GGTACCTCGTGAACACTTCG 58.305 55.000 4.06 0.00 0.00 3.79
2906 3018 2.508663 GTCGGCTTCTGCGGGTAC 60.509 66.667 0.00 0.00 40.82 3.34
2907 3019 2.678934 AGTCGGCTTCTGCGGGTA 60.679 61.111 0.00 0.00 40.82 3.69
2908 3020 4.070552 GAGTCGGCTTCTGCGGGT 62.071 66.667 0.00 0.00 40.82 5.28
2909 3021 3.764466 AGAGTCGGCTTCTGCGGG 61.764 66.667 0.00 0.00 40.82 6.13
2910 3022 2.290122 ATCAGAGTCGGCTTCTGCGG 62.290 60.000 10.46 0.00 40.82 5.69
2911 3023 0.459237 AATCAGAGTCGGCTTCTGCG 60.459 55.000 10.46 0.00 40.82 5.18
2912 3024 1.663135 GAAATCAGAGTCGGCTTCTGC 59.337 52.381 10.46 0.00 38.76 4.26
2913 3025 2.964740 TGAAATCAGAGTCGGCTTCTG 58.035 47.619 9.38 9.38 0.00 3.02
2914 3026 3.594134 CTTGAAATCAGAGTCGGCTTCT 58.406 45.455 0.00 0.00 0.00 2.85
2915 3027 2.675348 CCTTGAAATCAGAGTCGGCTTC 59.325 50.000 0.00 0.00 0.00 3.86
2916 3028 2.616510 CCCTTGAAATCAGAGTCGGCTT 60.617 50.000 0.00 0.00 0.00 4.35
2917 3029 1.065854 CCCTTGAAATCAGAGTCGGCT 60.066 52.381 0.00 0.00 0.00 5.52
2918 3030 1.339151 ACCCTTGAAATCAGAGTCGGC 60.339 52.381 0.00 0.00 0.00 5.54
2919 3031 2.350522 CACCCTTGAAATCAGAGTCGG 58.649 52.381 0.00 0.00 0.00 4.79
2920 3032 1.734465 GCACCCTTGAAATCAGAGTCG 59.266 52.381 0.00 0.00 0.00 4.18
2921 3033 2.087646 GGCACCCTTGAAATCAGAGTC 58.912 52.381 0.00 0.00 0.00 3.36
2922 3034 1.611673 CGGCACCCTTGAAATCAGAGT 60.612 52.381 0.00 0.00 0.00 3.24
2923 3035 1.089920 CGGCACCCTTGAAATCAGAG 58.910 55.000 0.00 0.00 0.00 3.35
2924 3036 0.960364 GCGGCACCCTTGAAATCAGA 60.960 55.000 0.00 0.00 0.00 3.27
2925 3037 1.243342 TGCGGCACCCTTGAAATCAG 61.243 55.000 0.00 0.00 0.00 2.90
2926 3038 0.825425 TTGCGGCACCCTTGAAATCA 60.825 50.000 0.05 0.00 0.00 2.57
2927 3039 0.109132 CTTGCGGCACCCTTGAAATC 60.109 55.000 0.05 0.00 0.00 2.17
2928 3040 1.535204 CCTTGCGGCACCCTTGAAAT 61.535 55.000 0.05 0.00 0.00 2.17
2929 3041 2.199652 CCTTGCGGCACCCTTGAAA 61.200 57.895 0.05 0.00 0.00 2.69
2930 3042 2.597217 CCTTGCGGCACCCTTGAA 60.597 61.111 0.05 0.00 0.00 2.69
2931 3043 3.884774 ACCTTGCGGCACCCTTGA 61.885 61.111 0.05 0.00 0.00 3.02
2932 3044 3.673484 CACCTTGCGGCACCCTTG 61.673 66.667 0.05 0.00 0.00 3.61
2933 3045 2.824880 TACACCTTGCGGCACCCTT 61.825 57.895 0.05 0.00 0.00 3.95
2934 3046 3.246112 TACACCTTGCGGCACCCT 61.246 61.111 0.05 0.00 0.00 4.34
2935 3047 3.053896 GTACACCTTGCGGCACCC 61.054 66.667 0.05 0.00 0.00 4.61
2936 3048 3.419759 CGTACACCTTGCGGCACC 61.420 66.667 0.05 0.00 0.00 5.01
2941 3053 3.118454 CAGCCCGTACACCTTGCG 61.118 66.667 0.00 0.00 0.00 4.85
2942 3054 0.887387 TTTCAGCCCGTACACCTTGC 60.887 55.000 0.00 0.00 0.00 4.01
2943 3055 1.737793 GATTTCAGCCCGTACACCTTG 59.262 52.381 0.00 0.00 0.00 3.61
2944 3056 1.674817 CGATTTCAGCCCGTACACCTT 60.675 52.381 0.00 0.00 0.00 3.50
2945 3057 0.108329 CGATTTCAGCCCGTACACCT 60.108 55.000 0.00 0.00 0.00 4.00
2946 3058 0.108520 TCGATTTCAGCCCGTACACC 60.109 55.000 0.00 0.00 0.00 4.16
2947 3059 1.278238 CTCGATTTCAGCCCGTACAC 58.722 55.000 0.00 0.00 0.00 2.90
2954 3066 0.107945 AGGCAGACTCGATTTCAGCC 60.108 55.000 17.95 17.95 44.07 4.85
2958 3070 2.675348 CCTTGAAGGCAGACTCGATTTC 59.325 50.000 0.00 0.00 0.00 2.17
2990 3102 2.521708 GGTTGCCTTGGGTGCAGT 60.522 61.111 0.00 0.00 40.35 4.40
3005 3117 4.163078 CAGAGGAATGTAATGACAGAGGGT 59.837 45.833 0.00 0.00 39.50 4.34
3014 3126 9.653287 TTAAGTTACAGACAGAGGAATGTAATG 57.347 33.333 0.00 0.00 39.53 1.90
3016 3128 9.871238 GATTAAGTTACAGACAGAGGAATGTAA 57.129 33.333 0.00 0.00 36.16 2.41
3018 3130 7.036220 CGATTAAGTTACAGACAGAGGAATGT 58.964 38.462 0.00 0.00 35.68 2.71
3019 3131 7.258441 TCGATTAAGTTACAGACAGAGGAATG 58.742 38.462 0.00 0.00 0.00 2.67
3020 3132 7.122948 ACTCGATTAAGTTACAGACAGAGGAAT 59.877 37.037 0.00 0.00 0.00 3.01
3021 3133 6.433404 ACTCGATTAAGTTACAGACAGAGGAA 59.567 38.462 0.00 0.00 0.00 3.36
3022 3134 5.944599 ACTCGATTAAGTTACAGACAGAGGA 59.055 40.000 0.00 0.00 0.00 3.71
3023 3135 6.094325 AGACTCGATTAAGTTACAGACAGAGG 59.906 42.308 0.00 0.00 0.00 3.69
3024 3136 6.964370 CAGACTCGATTAAGTTACAGACAGAG 59.036 42.308 0.00 0.00 0.00 3.35
3025 3137 6.623114 GCAGACTCGATTAAGTTACAGACAGA 60.623 42.308 0.00 0.00 0.00 3.41
3026 3138 5.513495 GCAGACTCGATTAAGTTACAGACAG 59.487 44.000 0.00 0.00 0.00 3.51
3028 3140 4.799428 GGCAGACTCGATTAAGTTACAGAC 59.201 45.833 0.00 0.00 0.00 3.51
3029 3141 4.705507 AGGCAGACTCGATTAAGTTACAGA 59.294 41.667 0.00 0.00 0.00 3.41
3030 3142 5.000012 AGGCAGACTCGATTAAGTTACAG 58.000 43.478 0.00 0.00 0.00 2.74
3031 3143 5.401531 AAGGCAGACTCGATTAAGTTACA 57.598 39.130 0.00 0.00 0.00 2.41
3032 3144 5.978322 CCTAAGGCAGACTCGATTAAGTTAC 59.022 44.000 0.00 0.00 0.00 2.50
3033 3145 5.068723 CCCTAAGGCAGACTCGATTAAGTTA 59.931 44.000 0.00 0.00 0.00 2.24
3034 3146 4.141914 CCCTAAGGCAGACTCGATTAAGTT 60.142 45.833 0.00 0.00 0.00 2.66
3035 3147 3.385111 CCCTAAGGCAGACTCGATTAAGT 59.615 47.826 0.00 0.00 0.00 2.24
3036 3148 3.385111 ACCCTAAGGCAGACTCGATTAAG 59.615 47.826 0.00 0.00 36.11 1.85
3037 3149 3.132289 CACCCTAAGGCAGACTCGATTAA 59.868 47.826 0.00 0.00 36.11 1.40
3038 3150 2.693591 CACCCTAAGGCAGACTCGATTA 59.306 50.000 0.00 0.00 36.11 1.75
3039 3151 1.482593 CACCCTAAGGCAGACTCGATT 59.517 52.381 0.00 0.00 36.11 3.34
3040 3152 1.115467 CACCCTAAGGCAGACTCGAT 58.885 55.000 0.00 0.00 36.11 3.59
3041 3153 1.605058 GCACCCTAAGGCAGACTCGA 61.605 60.000 0.00 0.00 36.11 4.04
3042 3154 1.153549 GCACCCTAAGGCAGACTCG 60.154 63.158 0.00 0.00 36.11 4.18
3043 3155 1.222113 GGCACCCTAAGGCAGACTC 59.778 63.158 0.00 0.00 36.11 3.36
3044 3156 1.538876 TGGCACCCTAAGGCAGACT 60.539 57.895 0.00 0.00 36.56 3.24
3045 3157 1.377333 GTGGCACCCTAAGGCAGAC 60.377 63.158 6.29 0.00 42.55 3.51
3046 3158 1.422977 TTGTGGCACCCTAAGGCAGA 61.423 55.000 16.26 0.00 42.55 4.26
3047 3159 0.962356 CTTGTGGCACCCTAAGGCAG 60.962 60.000 16.26 0.00 42.55 4.85
3048 3160 1.074775 CTTGTGGCACCCTAAGGCA 59.925 57.895 16.26 0.00 39.41 4.75
3049 3161 0.960861 GTCTTGTGGCACCCTAAGGC 60.961 60.000 16.26 10.06 36.11 4.35
3050 3162 0.693049 AGTCTTGTGGCACCCTAAGG 59.307 55.000 16.26 0.00 40.04 2.69
3051 3163 1.813513 CAGTCTTGTGGCACCCTAAG 58.186 55.000 16.26 12.24 0.00 2.18
3052 3164 0.250727 GCAGTCTTGTGGCACCCTAA 60.251 55.000 16.26 1.62 0.00 2.69
3053 3165 1.374947 GCAGTCTTGTGGCACCCTA 59.625 57.895 16.26 0.00 0.00 3.53
3054 3166 2.113986 GCAGTCTTGTGGCACCCT 59.886 61.111 16.26 2.77 0.00 4.34
3055 3167 2.203337 TGCAGTCTTGTGGCACCC 60.203 61.111 16.26 0.23 31.58 4.61
3058 3170 2.203337 GGGTGCAGTCTTGTGGCA 60.203 61.111 0.00 0.00 34.70 4.92
3059 3171 1.589716 GATGGGTGCAGTCTTGTGGC 61.590 60.000 0.00 0.00 0.00 5.01
3060 3172 0.962356 GGATGGGTGCAGTCTTGTGG 60.962 60.000 0.00 0.00 0.00 4.17
3061 3173 0.250858 TGGATGGGTGCAGTCTTGTG 60.251 55.000 0.00 0.00 0.00 3.33
3062 3174 0.700564 ATGGATGGGTGCAGTCTTGT 59.299 50.000 0.00 0.00 0.00 3.16
3063 3175 1.747355 GAATGGATGGGTGCAGTCTTG 59.253 52.381 0.00 0.00 37.72 3.02
3064 3176 1.679944 CGAATGGATGGGTGCAGTCTT 60.680 52.381 0.00 0.00 38.43 3.01
3065 3177 0.107508 CGAATGGATGGGTGCAGTCT 60.108 55.000 0.00 0.00 38.43 3.24
3066 3178 0.107703 TCGAATGGATGGGTGCAGTC 60.108 55.000 0.00 0.00 37.41 3.51
3067 3179 0.548031 ATCGAATGGATGGGTGCAGT 59.452 50.000 0.00 0.00 32.92 4.40
3068 3180 1.233019 GATCGAATGGATGGGTGCAG 58.767 55.000 0.00 0.00 34.82 4.41
3069 3181 0.532640 CGATCGAATGGATGGGTGCA 60.533 55.000 10.26 0.00 34.82 4.57
3070 3182 0.249868 TCGATCGAATGGATGGGTGC 60.250 55.000 16.99 0.00 34.82 5.01
3071 3183 2.341257 GATCGATCGAATGGATGGGTG 58.659 52.381 23.50 0.00 34.82 4.61
3072 3184 1.276421 GGATCGATCGAATGGATGGGT 59.724 52.381 23.50 1.16 34.82 4.51
3073 3185 1.737029 CGGATCGATCGAATGGATGGG 60.737 57.143 23.50 2.17 34.82 4.00
3074 3186 1.633561 CGGATCGATCGAATGGATGG 58.366 55.000 23.50 3.75 34.82 3.51
3083 3195 0.661780 GACAAGAGGCGGATCGATCG 60.662 60.000 18.81 9.36 0.00 3.69
3089 3201 2.180276 AGTTACAGACAAGAGGCGGAT 58.820 47.619 0.00 0.00 0.00 4.18
3106 3218 9.959749 TGCTCGAGAAAACAAAATAATTAAGTT 57.040 25.926 18.75 0.00 0.00 2.66
3107 3219 9.394477 GTGCTCGAGAAAACAAAATAATTAAGT 57.606 29.630 18.75 0.00 0.00 2.24
3108 3220 9.612620 AGTGCTCGAGAAAACAAAATAATTAAG 57.387 29.630 18.75 0.00 0.00 1.85
3109 3221 9.393249 CAGTGCTCGAGAAAACAAAATAATTAA 57.607 29.630 18.75 0.00 0.00 1.40
3110 3222 8.564574 ACAGTGCTCGAGAAAACAAAATAATTA 58.435 29.630 18.75 0.00 0.00 1.40
3111 3223 7.425606 ACAGTGCTCGAGAAAACAAAATAATT 58.574 30.769 18.75 0.00 0.00 1.40
3112 3224 6.970484 ACAGTGCTCGAGAAAACAAAATAAT 58.030 32.000 18.75 0.00 0.00 1.28
3113 3225 6.371809 ACAGTGCTCGAGAAAACAAAATAA 57.628 33.333 18.75 0.00 0.00 1.40
3114 3226 7.225931 ACTTACAGTGCTCGAGAAAACAAAATA 59.774 33.333 18.75 0.30 0.00 1.40
3115 3227 4.900635 ACAGTGCTCGAGAAAACAAAAT 57.099 36.364 18.75 0.00 0.00 1.82
3116 3228 5.353123 ACTTACAGTGCTCGAGAAAACAAAA 59.647 36.000 18.75 5.90 0.00 2.44
3117 3229 4.873827 ACTTACAGTGCTCGAGAAAACAAA 59.126 37.500 18.75 2.13 0.00 2.83
3118 3230 4.439057 ACTTACAGTGCTCGAGAAAACAA 58.561 39.130 18.75 1.22 0.00 2.83
3119 3231 4.049186 GACTTACAGTGCTCGAGAAAACA 58.951 43.478 18.75 0.69 0.00 2.83
3120 3232 3.119792 CGACTTACAGTGCTCGAGAAAAC 59.880 47.826 18.75 10.84 0.00 2.43
3121 3233 3.004002 TCGACTTACAGTGCTCGAGAAAA 59.996 43.478 18.75 0.00 0.00 2.29
3122 3234 2.551032 TCGACTTACAGTGCTCGAGAAA 59.449 45.455 18.75 0.00 0.00 2.52
3123 3235 2.148768 TCGACTTACAGTGCTCGAGAA 58.851 47.619 18.75 1.15 0.00 2.87
3128 3240 3.766676 TCAGATCGACTTACAGTGCTC 57.233 47.619 0.00 0.00 0.00 4.26
3140 3252 4.397481 AACTGAAGATGCATCAGATCGA 57.603 40.909 27.81 12.18 45.74 3.59
3142 3254 9.798994 AAATTAAAACTGAAGATGCATCAGATC 57.201 29.630 27.81 21.08 45.74 2.75
3144 3256 9.985730 AAAAATTAAAACTGAAGATGCATCAGA 57.014 25.926 27.81 10.39 45.74 3.27
3146 3258 9.761504 TGAAAAATTAAAACTGAAGATGCATCA 57.238 25.926 27.81 8.92 0.00 3.07
3149 3261 8.538856 CGTTGAAAAATTAAAACTGAAGATGCA 58.461 29.630 0.00 0.00 0.00 3.96
3150 3262 8.751335 TCGTTGAAAAATTAAAACTGAAGATGC 58.249 29.630 0.00 0.00 0.00 3.91
3165 3277 7.271223 CGCTGACAGAAATATTCGTTGAAAAAT 59.729 33.333 6.65 0.00 34.02 1.82
3195 3307 3.311322 CCAAACTCTGTTGTCTGCGTTAA 59.689 43.478 0.00 0.00 0.00 2.01
3202 3314 6.530019 AAACATTTCCAAACTCTGTTGTCT 57.470 33.333 0.00 0.00 30.90 3.41
3207 3319 4.036380 GGACGAAACATTTCCAAACTCTGT 59.964 41.667 0.00 0.00 33.68 3.41
3224 3336 3.782992 AGGGAAGGTTTACTAGGACGAA 58.217 45.455 0.00 0.00 0.00 3.85
3226 3338 4.501058 GCATAGGGAAGGTTTACTAGGACG 60.501 50.000 0.00 0.00 0.00 4.79
3227 3339 4.407945 TGCATAGGGAAGGTTTACTAGGAC 59.592 45.833 0.00 0.00 0.00 3.85
3228 3340 4.627015 TGCATAGGGAAGGTTTACTAGGA 58.373 43.478 0.00 0.00 0.00 2.94
3229 3341 5.308825 CATGCATAGGGAAGGTTTACTAGG 58.691 45.833 0.00 0.00 0.00 3.02
3230 3342 4.757149 GCATGCATAGGGAAGGTTTACTAG 59.243 45.833 14.21 0.00 0.00 2.57
3231 3343 4.445735 GGCATGCATAGGGAAGGTTTACTA 60.446 45.833 21.36 0.00 0.00 1.82
3233 3345 2.623416 GGCATGCATAGGGAAGGTTTAC 59.377 50.000 21.36 0.00 0.00 2.01
3234 3346 2.513738 AGGCATGCATAGGGAAGGTTTA 59.486 45.455 21.36 0.00 0.00 2.01
3235 3347 1.288932 AGGCATGCATAGGGAAGGTTT 59.711 47.619 21.36 0.00 0.00 3.27
3237 3349 0.475906 GAGGCATGCATAGGGAAGGT 59.524 55.000 21.36 0.00 0.00 3.50
3238 3350 0.604780 CGAGGCATGCATAGGGAAGG 60.605 60.000 21.36 0.00 0.00 3.46
3239 3351 0.107456 ACGAGGCATGCATAGGGAAG 59.893 55.000 21.36 3.15 0.00 3.46
3240 3352 0.106708 GACGAGGCATGCATAGGGAA 59.893 55.000 21.36 0.00 0.00 3.97
3243 3355 0.602106 CCAGACGAGGCATGCATAGG 60.602 60.000 21.36 10.69 0.00 2.57
3244 3356 0.602106 CCCAGACGAGGCATGCATAG 60.602 60.000 21.36 16.00 0.00 2.23
3246 3358 2.191375 CCCAGACGAGGCATGCAT 59.809 61.111 21.36 13.78 0.00 3.96
3248 3360 2.512515 GACCCAGACGAGGCATGC 60.513 66.667 9.90 9.90 0.00 4.06
3249 3361 2.021068 ATCGACCCAGACGAGGCATG 62.021 60.000 0.00 0.00 42.81 4.06
3250 3362 1.758514 ATCGACCCAGACGAGGCAT 60.759 57.895 0.00 0.00 42.81 4.40
3256 3371 0.934901 CGCATACATCGACCCAGACG 60.935 60.000 0.00 0.00 0.00 4.18
3261 3376 0.880278 ATGCACGCATACATCGACCC 60.880 55.000 1.86 0.00 34.49 4.46
3263 3378 0.930310 ACATGCACGCATACATCGAC 59.070 50.000 3.80 0.00 34.91 4.20
3275 3390 4.153475 ACACGTCCAAAAGTATACATGCAC 59.847 41.667 5.50 0.00 0.00 4.57
3295 3410 5.112937 CAGTACGTGCGTCAAAATTAAACAC 59.887 40.000 0.00 0.00 0.00 3.32
3299 3414 4.746115 AGTCAGTACGTGCGTCAAAATTAA 59.254 37.500 0.00 0.00 0.00 1.40
3308 3423 1.668919 CCAATCAGTCAGTACGTGCGT 60.669 52.381 0.00 2.05 0.00 5.24
3314 3429 3.664107 TGCACTTCCAATCAGTCAGTAC 58.336 45.455 0.00 0.00 0.00 2.73
3316 3431 2.936919 TGCACTTCCAATCAGTCAGT 57.063 45.000 0.00 0.00 0.00 3.41
3321 3436 0.379669 GCCGATGCACTTCCAATCAG 59.620 55.000 0.00 0.00 37.47 2.90
3331 3467 0.109781 AAACAATGACGCCGATGCAC 60.110 50.000 0.00 0.00 37.32 4.57
3332 3468 0.595588 AAAACAATGACGCCGATGCA 59.404 45.000 0.00 0.00 37.32 3.96
3348 3484 6.705381 CCTGGAAACATTTTACAGCATCAAAA 59.295 34.615 5.48 0.00 41.51 2.44
3351 3487 4.321899 GCCTGGAAACATTTTACAGCATCA 60.322 41.667 5.48 0.00 41.51 3.07
3353 3489 3.834231 AGCCTGGAAACATTTTACAGCAT 59.166 39.130 5.48 0.00 41.51 3.79
3358 3494 2.595386 CGCAGCCTGGAAACATTTTAC 58.405 47.619 0.00 0.00 41.51 2.01
3360 3496 3.892200 CGCAGCCTGGAAACATTTT 57.108 47.368 0.00 0.00 41.51 1.82
3374 3510 0.731514 CATTTTCACCAGCTGCGCAG 60.732 55.000 32.83 32.83 0.00 5.18
3375 3511 1.286570 CATTTTCACCAGCTGCGCA 59.713 52.632 10.98 10.98 0.00 6.09
3376 3512 2.090524 GCATTTTCACCAGCTGCGC 61.091 57.895 8.66 0.00 0.00 6.09
3377 3513 0.804364 TAGCATTTTCACCAGCTGCG 59.196 50.000 8.66 4.27 37.94 5.18
3396 3532 3.700038 AGCAACGCCTTCAGTATAGTAGT 59.300 43.478 0.00 0.00 0.00 2.73
3397 3533 4.308899 AGCAACGCCTTCAGTATAGTAG 57.691 45.455 0.00 0.00 0.00 2.57
3398 3534 4.730949 AAGCAACGCCTTCAGTATAGTA 57.269 40.909 0.00 0.00 0.00 1.82
3399 3535 3.611766 AAGCAACGCCTTCAGTATAGT 57.388 42.857 0.00 0.00 0.00 2.12
3400 3536 4.946784 AAAAGCAACGCCTTCAGTATAG 57.053 40.909 0.00 0.00 0.00 1.31
3401 3537 6.676943 GCAATAAAAGCAACGCCTTCAGTATA 60.677 38.462 0.00 0.00 0.00 1.47
3402 3538 5.640732 CAATAAAAGCAACGCCTTCAGTAT 58.359 37.500 0.00 0.00 0.00 2.12
3407 3543 1.992667 GGCAATAAAAGCAACGCCTTC 59.007 47.619 0.00 0.00 36.58 3.46
3408 3544 2.078849 GGCAATAAAAGCAACGCCTT 57.921 45.000 0.00 0.00 36.58 4.35
3427 3563 3.175240 CGACGTTCTGCTGCCGAG 61.175 66.667 0.00 0.00 0.00 4.63
3430 3566 2.187599 AAATGCGACGTTCTGCTGCC 62.188 55.000 9.32 0.00 0.00 4.85
3438 3611 6.844696 ATGTTCTATGATAAATGCGACGTT 57.155 33.333 0.00 0.00 0.00 3.99
3440 3613 9.644993 TTTTAATGTTCTATGATAAATGCGACG 57.355 29.630 0.00 0.00 0.00 5.12
3463 3636 6.924111 ACCAGAAATTCTGCGATGTATTTTT 58.076 32.000 17.03 0.00 42.98 1.94
3464 3637 6.515272 ACCAGAAATTCTGCGATGTATTTT 57.485 33.333 17.03 0.00 42.98 1.82
3468 3641 5.000591 TGAAACCAGAAATTCTGCGATGTA 58.999 37.500 17.03 0.00 42.98 2.29
3470 3643 4.424061 TGAAACCAGAAATTCTGCGATG 57.576 40.909 17.03 6.47 42.98 3.84
3472 3645 3.882888 ACTTGAAACCAGAAATTCTGCGA 59.117 39.130 17.03 3.25 42.98 5.10
3473 3646 4.228912 ACTTGAAACCAGAAATTCTGCG 57.771 40.909 17.03 12.51 42.98 5.18
3474 3647 6.534793 TCAAAACTTGAAACCAGAAATTCTGC 59.465 34.615 17.03 4.62 38.77 4.26
3527 3712 8.716674 ATTTCTATCATATGCTTTCCCATTGT 57.283 30.769 0.00 0.00 0.00 2.71
3531 3716 7.748677 TCTGATTTCTATCATATGCTTTCCCA 58.251 34.615 0.00 0.00 39.94 4.37
3542 3727 6.320418 TGCATTGCTGTTCTGATTTCTATCAT 59.680 34.615 10.49 0.00 39.94 2.45
3550 3735 3.093814 TCCATGCATTGCTGTTCTGATT 58.906 40.909 10.49 0.00 0.00 2.57
3554 3739 1.180029 GGTCCATGCATTGCTGTTCT 58.820 50.000 10.49 0.00 0.00 3.01
3571 3756 8.385898 TCGACAGAAATTTTATACTTTGTGGT 57.614 30.769 0.00 0.00 31.82 4.16
3572 3757 9.840427 AATCGACAGAAATTTTATACTTTGTGG 57.160 29.630 0.00 0.00 31.82 4.17
3578 3763 9.667107 TCCTGAAATCGACAGAAATTTTATACT 57.333 29.630 3.24 0.00 37.54 2.12
3583 3773 6.587608 GCAATCCTGAAATCGACAGAAATTTT 59.412 34.615 3.24 0.00 37.54 1.82
3591 3781 3.055458 TGGTAGCAATCCTGAAATCGACA 60.055 43.478 0.00 0.00 0.00 4.35
3637 3827 0.889186 AACGTGGCGATGGAGCTTTT 60.889 50.000 0.00 0.00 37.29 2.27
3655 3845 0.033405 AGGCGAGGAGTAGTAGGCAA 60.033 55.000 0.00 0.00 0.00 4.52
3657 3847 2.203470 ATAGGCGAGGAGTAGTAGGC 57.797 55.000 0.00 0.00 0.00 3.93
3683 3873 6.700081 TGCGTATTATCTATGGTGTTCTGTTC 59.300 38.462 0.00 0.00 0.00 3.18
3732 3931 3.168271 CCGTTGTGGTGAGCATCG 58.832 61.111 0.00 0.00 38.61 3.84
3741 3944 1.266718 CCATGTCTTTCACCGTTGTGG 59.733 52.381 0.00 0.00 42.98 4.17
3743 3946 2.631160 TCCATGTCTTTCACCGTTGT 57.369 45.000 0.00 0.00 0.00 3.32
3755 3958 8.655970 CCTTTTTAAAATTTCCGAATCCATGTC 58.344 33.333 0.55 0.00 0.00 3.06
3759 3962 6.425417 GTGCCTTTTTAAAATTTCCGAATCCA 59.575 34.615 0.55 0.00 0.00 3.41
3774 3977 3.644966 ATCATCTCCGGTGCCTTTTTA 57.355 42.857 0.00 0.00 0.00 1.52
3775 3978 2.514458 ATCATCTCCGGTGCCTTTTT 57.486 45.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.