Multiple sequence alignment - TraesCS6D01G031400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G031400 chr6D 100.000 6530 0 0 1 6530 13102553 13096024 0.000000e+00 12059.0
1 TraesCS6D01G031400 chr6D 79.685 635 107 18 4022 4648 3590438 3591058 7.770000e-119 438.0
2 TraesCS6D01G031400 chr6D 79.417 583 84 29 1462 2027 3587871 3588434 4.780000e-101 379.0
3 TraesCS6D01G031400 chr6D 79.427 384 43 20 3258 3634 3590076 3590430 8.460000e-59 239.0
4 TraesCS6D01G031400 chr6D 81.106 217 39 2 1144 1359 3587574 3587789 8.710000e-39 172.0
5 TraesCS6D01G031400 chr6D 91.837 49 3 1 451 498 453463827 453463779 4.230000e-07 67.6
6 TraesCS6D01G031400 chr6A 94.871 2866 114 11 794 3641 14377475 14374625 0.000000e+00 4447.0
7 TraesCS6D01G031400 chr6A 95.972 1887 57 9 4023 5904 14374623 14372751 0.000000e+00 3046.0
8 TraesCS6D01G031400 chr6A 90.066 453 31 4 1 453 14378105 14377667 5.680000e-160 575.0
9 TraesCS6D01G031400 chr6A 88.319 351 19 6 6182 6514 14372490 14372144 1.020000e-107 401.0
10 TraesCS6D01G031400 chr6A 79.525 547 103 9 4106 4648 2401430 2401971 1.330000e-101 381.0
11 TraesCS6D01G031400 chr6A 87.556 225 12 4 5902 6117 14372708 14372491 5.060000e-61 246.0
12 TraesCS6D01G031400 chr6A 81.567 217 40 0 1143 1359 2398419 2398635 5.200000e-41 180.0
13 TraesCS6D01G031400 chr6A 83.478 115 15 1 5532 5642 14373238 14373124 3.220000e-18 104.0
14 TraesCS6D01G031400 chr6A 100.000 55 0 0 3646 3700 74777398 74777344 1.160000e-17 102.0
15 TraesCS6D01G031400 chr6B 95.406 2438 79 10 786 3198 23638889 23641318 0.000000e+00 3851.0
16 TraesCS6D01G031400 chr6B 90.762 1851 131 18 4070 5904 23641944 23643770 0.000000e+00 2435.0
17 TraesCS6D01G031400 chr6B 89.342 638 32 6 5902 6528 23643813 23644425 0.000000e+00 769.0
18 TraesCS6D01G031400 chr6B 82.494 874 133 15 2343 3206 7102015 7101152 0.000000e+00 749.0
19 TraesCS6D01G031400 chr6B 82.497 857 132 12 2343 3188 6850486 6851335 0.000000e+00 736.0
20 TraesCS6D01G031400 chr6B 82.151 874 136 13 2343 3206 7154254 7153391 0.000000e+00 732.0
21 TraesCS6D01G031400 chr6B 95.344 451 16 3 3196 3642 23641407 23641856 0.000000e+00 712.0
22 TraesCS6D01G031400 chr6B 81.109 577 99 9 4076 4648 7100259 7099689 2.780000e-123 453.0
23 TraesCS6D01G031400 chr6B 80.936 577 100 9 4076 4648 7152585 7152015 1.290000e-121 448.0
24 TraesCS6D01G031400 chr6B 79.935 613 111 11 4040 4648 6851851 6852455 2.160000e-119 440.0
25 TraesCS6D01G031400 chr6B 80.098 613 88 28 1469 2067 6849388 6849980 6.050000e-115 425.0
26 TraesCS6D01G031400 chr6B 78.871 620 101 26 1462 2067 7155527 7154924 6.140000e-105 392.0
27 TraesCS6D01G031400 chr6B 80.370 433 67 17 4076 4500 7109067 7108645 4.920000e-81 313.0
28 TraesCS6D01G031400 chr6B 88.142 253 30 0 2343 2595 7110190 7109938 1.060000e-77 302.0
29 TraesCS6D01G031400 chr6B 81.026 390 62 8 3258 3642 7100788 7100406 3.830000e-77 300.0
30 TraesCS6D01G031400 chr6B 81.026 390 62 8 3258 3642 7106850 7106468 3.830000e-77 300.0
31 TraesCS6D01G031400 chr6B 81.026 390 62 8 3258 3642 7153027 7152645 3.830000e-77 300.0
32 TraesCS6D01G031400 chr6B 89.030 237 19 3 552 782 23638555 23638790 2.980000e-73 287.0
33 TraesCS6D01G031400 chr6B 86.364 220 14 8 1 211 23638090 23638302 6.590000e-55 226.0
34 TraesCS6D01G031400 chr6B 80.734 218 40 2 1143 1359 6849092 6849308 1.130000e-37 169.0
35 TraesCS6D01G031400 chr6B 87.500 112 14 0 5532 5643 23643282 23643393 5.310000e-26 130.0
36 TraesCS6D01G031400 chr6B 82.394 142 25 0 4999 5140 6852784 6852925 2.470000e-24 124.0
37 TraesCS6D01G031400 chr6B 89.024 82 9 0 4999 5080 6878039 6878120 1.160000e-17 102.0
38 TraesCS6D01G031400 chr6B 100.000 55 0 0 3646 3700 297476745 297476799 1.160000e-17 102.0
39 TraesCS6D01G031400 chr1D 97.727 308 7 0 3696 4003 493486114 493486421 1.250000e-146 531.0
40 TraesCS6D01G031400 chr2D 97.419 310 8 0 3693 4002 103357795 103358104 4.480000e-146 529.0
41 TraesCS6D01G031400 chr2D 97.125 313 9 0 3693 4005 104410760 104410448 4.480000e-146 529.0
42 TraesCS6D01G031400 chr2D 97.106 311 9 0 3694 4004 143750039 143750349 5.800000e-145 525.0
43 TraesCS6D01G031400 chr2D 96.262 321 11 1 3691 4010 383808108 383807788 5.800000e-145 525.0
44 TraesCS6D01G031400 chr2D 95.679 324 11 3 3697 4019 561321192 561320871 9.710000e-143 518.0
45 TraesCS6D01G031400 chr2D 100.000 55 0 0 3646 3700 39574688 39574634 1.160000e-17 102.0
46 TraesCS6D01G031400 chr4D 97.125 313 8 1 3693 4004 170341134 170340822 1.610000e-145 527.0
47 TraesCS6D01G031400 chr5D 97.115 312 8 1 3693 4004 268836073 268836383 5.800000e-145 525.0
48 TraesCS6D01G031400 chr5D 97.411 309 7 1 3696 4004 447952413 447952720 5.800000e-145 525.0
49 TraesCS6D01G031400 chr5D 95.556 45 0 2 443 487 417490086 417490044 3.270000e-08 71.3
50 TraesCS6D01G031400 chrUn 100.000 55 0 0 3646 3700 229492480 229492534 1.160000e-17 102.0
51 TraesCS6D01G031400 chrUn 98.182 55 1 0 3646 3700 296250198 296250144 5.390000e-16 97.1
52 TraesCS6D01G031400 chr3B 100.000 55 0 0 3646 3700 630290202 630290148 1.160000e-17 102.0
53 TraesCS6D01G031400 chr3B 89.655 58 4 2 452 509 408415202 408415147 9.080000e-09 73.1
54 TraesCS6D01G031400 chr1B 100.000 55 0 0 3646 3700 135107305 135107359 1.160000e-17 102.0
55 TraesCS6D01G031400 chr1B 100.000 55 0 0 3646 3700 534308035 534307981 1.160000e-17 102.0
56 TraesCS6D01G031400 chr2B 100.000 54 0 0 3647 3700 468467437 468467490 4.170000e-17 100.0
57 TraesCS6D01G031400 chr2B 95.238 42 1 1 515 555 475592104 475592145 1.520000e-06 65.8
58 TraesCS6D01G031400 chr2B 89.130 46 2 2 522 564 493969036 493968991 3.000000e-03 54.7
59 TraesCS6D01G031400 chr4A 97.619 42 0 1 451 491 27649233 27649274 3.270000e-08 71.3
60 TraesCS6D01G031400 chr4A 100.000 28 0 0 537 564 134538303 134538276 1.200000e-02 52.8
61 TraesCS6D01G031400 chr7B 95.349 43 0 2 443 485 737016624 737016584 4.230000e-07 67.6
62 TraesCS6D01G031400 chr7B 95.349 43 0 2 443 485 737033257 737033217 4.230000e-07 67.6
63 TraesCS6D01G031400 chr7B 95.349 43 0 2 443 485 737057677 737057637 4.230000e-07 67.6
64 TraesCS6D01G031400 chr7B 95.349 43 0 2 443 485 737317119 737317079 4.230000e-07 67.6
65 TraesCS6D01G031400 chr5B 84.848 66 4 3 433 492 335801592 335801527 1.970000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G031400 chr6D 13096024 13102553 6529 True 12059.000000 12059 100.000000 1 6530 1 chr6D.!!$R1 6529
1 TraesCS6D01G031400 chr6D 3587574 3591058 3484 False 307.000000 438 79.908750 1144 4648 4 chr6D.!!$F1 3504
2 TraesCS6D01G031400 chr6A 14372144 14378105 5961 True 1469.833333 4447 90.043667 1 6514 6 chr6A.!!$R2 6513
3 TraesCS6D01G031400 chr6A 2398419 2401971 3552 False 280.500000 381 80.546000 1143 4648 2 chr6A.!!$F1 3505
4 TraesCS6D01G031400 chr6B 23638090 23644425 6335 False 1201.428571 3851 90.535429 1 6528 7 chr6B.!!$F4 6527
5 TraesCS6D01G031400 chr6B 7099689 7102015 2326 True 500.666667 749 81.543000 2343 4648 3 chr6B.!!$R1 2305
6 TraesCS6D01G031400 chr6B 7152015 7155527 3512 True 468.000000 732 80.746000 1462 4648 4 chr6B.!!$R3 3186
7 TraesCS6D01G031400 chr6B 6849092 6852925 3833 False 378.800000 736 81.131600 1143 5140 5 chr6B.!!$F3 3997
8 TraesCS6D01G031400 chr6B 7106468 7110190 3722 True 305.000000 313 83.179333 2343 4500 3 chr6B.!!$R2 2157

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
461 500 0.394488 TGAGCTGAGTACTCCCTCCG 60.394 60.000 25.65 11.32 32.98 4.63 F
550 589 0.603569 CGATCTTATGGGACGGAGGG 59.396 60.000 0.00 0.00 0.00 4.30 F
553 592 0.635009 TCTTATGGGACGGAGGGAGT 59.365 55.000 0.00 0.00 0.00 3.85 F
558 597 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24 F
1700 1861 1.079057 GGTTGAGCTCGAAGACCCC 60.079 63.158 4.86 0.00 0.00 4.95 F
2614 3257 0.522626 TCGCACATTGTCTTGGCATG 59.477 50.000 0.00 0.00 0.00 4.06 F
3985 7191 0.250989 TCCCGCGTTTTGGAAATCCT 60.251 50.000 4.92 0.00 36.82 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1662 1817 0.319083 TGGTCGATAGCCAACAACGT 59.681 50.000 0.00 0.0 38.90 3.99 R
2358 3001 1.264020 GCAGCAACATCGACAAGTTCA 59.736 47.619 0.00 0.0 0.00 3.18 R
2613 3256 4.277672 ACTGAAGTAAGTAGACGAACTGCA 59.722 41.667 0.00 0.0 33.69 4.41 R
2614 3257 4.796369 ACTGAAGTAAGTAGACGAACTGC 58.204 43.478 0.00 0.0 0.00 4.40 R
3674 6880 0.107165 TAGCTGCTCTCGCTCTACCA 60.107 55.000 4.91 0.0 38.86 3.25 R
4174 7593 0.184211 GGGTACAACCACCACCAACT 59.816 55.000 0.00 0.0 41.02 3.16 R
5892 9338 0.438830 GAGTTTCACATCGACGCACC 59.561 55.000 0.00 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 2.945668 GTGGACACAAAGTTCTCAGCTT 59.054 45.455 0.00 0.00 0.00 3.74
137 139 4.634443 AGCAAATAATCGGTTTTAGCTCGT 59.366 37.500 0.00 0.00 0.00 4.18
170 180 6.208644 ACGAGTTTCACGTTAAGCTAGTTAA 58.791 36.000 6.33 0.00 41.18 2.01
172 182 7.222611 ACGAGTTTCACGTTAAGCTAGTTAAAA 59.777 33.333 6.33 0.00 41.18 1.52
230 269 3.583882 ATCAACCCAACCCAGCCCG 62.584 63.158 0.00 0.00 0.00 6.13
321 360 9.812347 AATTTGGATTCCTGTTAGATATATGCA 57.188 29.630 3.95 0.00 0.00 3.96
358 397 1.133025 GTTAACTAGCGCTCACGGGTA 59.867 52.381 16.34 2.94 40.57 3.69
366 405 2.181021 CTCACGGGTACTCGCCAC 59.819 66.667 16.75 0.00 0.00 5.01
374 413 1.673923 GGGTACTCGCCACCTTAACAC 60.674 57.143 0.00 0.00 36.25 3.32
380 419 1.873863 GCCACCTTAACACGCTTCC 59.126 57.895 0.00 0.00 0.00 3.46
389 428 3.470567 CACGCTTCCGACGACTGC 61.471 66.667 0.00 0.00 38.29 4.40
403 442 2.863153 CTGCGAGCAGGGTTTTCG 59.137 61.111 16.69 0.00 40.17 3.46
428 467 5.414789 TGTTAAGCTTACCAGACATAGCA 57.585 39.130 5.45 0.00 36.11 3.49
459 498 5.195001 CTTAATGAGCTGAGTACTCCCTC 57.805 47.826 23.58 23.58 32.98 4.30
460 499 2.080654 ATGAGCTGAGTACTCCCTCC 57.919 55.000 25.65 13.57 32.98 4.30
461 500 0.394488 TGAGCTGAGTACTCCCTCCG 60.394 60.000 25.65 11.32 32.98 4.63
463 502 0.917533 AGCTGAGTACTCCCTCCGTA 59.082 55.000 20.11 0.00 0.00 4.02
464 503 1.284198 AGCTGAGTACTCCCTCCGTAA 59.716 52.381 20.11 0.00 0.00 3.18
465 504 2.097825 GCTGAGTACTCCCTCCGTAAA 58.902 52.381 20.11 0.00 0.00 2.01
466 505 2.494870 GCTGAGTACTCCCTCCGTAAAA 59.505 50.000 20.11 0.00 0.00 1.52
467 506 3.056322 GCTGAGTACTCCCTCCGTAAAAA 60.056 47.826 20.11 0.00 0.00 1.94
494 533 9.877178 ATATAAGAGCGTTTAGATCATTAAGGG 57.123 33.333 0.00 0.00 37.82 3.95
495 534 5.871396 AGAGCGTTTAGATCATTAAGGGA 57.129 39.130 0.00 0.00 37.82 4.20
505 544 5.632118 AGATCATTAAGGGAGTAGCTCGTA 58.368 41.667 0.00 0.00 0.00 3.43
516 555 5.236263 GGGAGTAGCTCGTAAACTAGTACTC 59.764 48.000 0.00 1.86 35.98 2.59
517 556 5.236263 GGAGTAGCTCGTAAACTAGTACTCC 59.764 48.000 16.15 16.15 44.66 3.85
518 557 5.122519 AGTAGCTCGTAAACTAGTACTCCC 58.877 45.833 0.00 0.00 0.00 4.30
521 560 5.367302 AGCTCGTAAACTAGTACTCCCTAG 58.633 45.833 0.00 0.00 40.26 3.02
522 561 4.024133 GCTCGTAAACTAGTACTCCCTAGC 60.024 50.000 0.00 0.00 38.39 3.42
523 562 5.365021 TCGTAAACTAGTACTCCCTAGCT 57.635 43.478 0.00 0.00 38.39 3.32
524 563 5.749462 TCGTAAACTAGTACTCCCTAGCTT 58.251 41.667 0.00 0.00 38.39 3.74
525 564 5.587844 TCGTAAACTAGTACTCCCTAGCTTG 59.412 44.000 0.00 0.00 38.39 4.01
526 565 4.739587 AAACTAGTACTCCCTAGCTTGC 57.260 45.455 0.00 0.00 38.39 4.01
527 566 3.383698 ACTAGTACTCCCTAGCTTGCA 57.616 47.619 0.00 0.00 38.39 4.08
528 567 3.709587 ACTAGTACTCCCTAGCTTGCAA 58.290 45.455 0.00 0.00 38.39 4.08
529 568 4.094476 ACTAGTACTCCCTAGCTTGCAAA 58.906 43.478 0.00 0.00 38.39 3.68
532 571 1.523758 ACTCCCTAGCTTGCAAAACG 58.476 50.000 0.00 0.00 0.00 3.60
533 572 1.071699 ACTCCCTAGCTTGCAAAACGA 59.928 47.619 0.00 0.00 0.00 3.85
534 573 2.290323 ACTCCCTAGCTTGCAAAACGAT 60.290 45.455 0.00 0.00 0.00 3.73
535 574 2.352960 CTCCCTAGCTTGCAAAACGATC 59.647 50.000 0.00 0.00 0.00 3.69
536 575 2.027192 TCCCTAGCTTGCAAAACGATCT 60.027 45.455 0.00 0.00 0.00 2.75
537 576 2.749621 CCCTAGCTTGCAAAACGATCTT 59.250 45.455 0.00 0.00 0.00 2.40
538 577 3.938963 CCCTAGCTTGCAAAACGATCTTA 59.061 43.478 0.00 0.00 0.00 2.10
539 578 4.576463 CCCTAGCTTGCAAAACGATCTTAT 59.424 41.667 0.00 0.00 0.00 1.73
540 579 5.504665 CCCTAGCTTGCAAAACGATCTTATG 60.505 44.000 0.00 0.00 0.00 1.90
541 580 4.361451 AGCTTGCAAAACGATCTTATGG 57.639 40.909 0.00 0.00 0.00 2.74
542 581 3.129287 AGCTTGCAAAACGATCTTATGGG 59.871 43.478 0.00 0.00 0.00 4.00
543 582 3.128589 GCTTGCAAAACGATCTTATGGGA 59.871 43.478 0.00 0.00 0.00 4.37
544 583 4.662145 CTTGCAAAACGATCTTATGGGAC 58.338 43.478 0.00 0.00 0.00 4.46
545 584 2.675844 TGCAAAACGATCTTATGGGACG 59.324 45.455 0.00 0.00 0.00 4.79
546 585 2.031683 GCAAAACGATCTTATGGGACGG 59.968 50.000 0.00 0.00 0.00 4.79
547 586 3.527533 CAAAACGATCTTATGGGACGGA 58.472 45.455 0.00 0.00 0.00 4.69
548 587 3.454371 AAACGATCTTATGGGACGGAG 57.546 47.619 0.00 0.00 0.00 4.63
549 588 1.329256 ACGATCTTATGGGACGGAGG 58.671 55.000 0.00 0.00 0.00 4.30
550 589 0.603569 CGATCTTATGGGACGGAGGG 59.396 60.000 0.00 0.00 0.00 4.30
551 590 1.822062 CGATCTTATGGGACGGAGGGA 60.822 57.143 0.00 0.00 0.00 4.20
552 591 1.896465 GATCTTATGGGACGGAGGGAG 59.104 57.143 0.00 0.00 0.00 4.30
553 592 0.635009 TCTTATGGGACGGAGGGAGT 59.365 55.000 0.00 0.00 0.00 3.85
554 593 1.854939 TCTTATGGGACGGAGGGAGTA 59.145 52.381 0.00 0.00 0.00 2.59
555 594 1.962100 CTTATGGGACGGAGGGAGTAC 59.038 57.143 0.00 0.00 0.00 2.73
556 595 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
557 596 1.229131 ATGGGACGGAGGGAGTACTA 58.771 55.000 0.00 0.00 0.00 1.82
558 597 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24
559 598 1.572415 TGGGACGGAGGGAGTACTAAT 59.428 52.381 0.00 0.00 0.00 1.73
560 599 2.023695 TGGGACGGAGGGAGTACTAATT 60.024 50.000 0.00 0.00 0.00 1.40
561 600 3.205056 TGGGACGGAGGGAGTACTAATTA 59.795 47.826 0.00 0.00 0.00 1.40
562 601 4.218312 GGGACGGAGGGAGTACTAATTAA 58.782 47.826 0.00 0.00 0.00 1.40
563 602 4.280425 GGGACGGAGGGAGTACTAATTAAG 59.720 50.000 0.00 0.00 0.00 1.85
564 603 4.892345 GGACGGAGGGAGTACTAATTAAGT 59.108 45.833 0.00 0.00 42.62 2.24
565 604 5.221204 GGACGGAGGGAGTACTAATTAAGTG 60.221 48.000 0.00 0.00 39.39 3.16
566 605 4.099113 ACGGAGGGAGTACTAATTAAGTGC 59.901 45.833 0.00 0.00 39.39 4.40
567 606 4.098960 CGGAGGGAGTACTAATTAAGTGCA 59.901 45.833 0.00 0.00 42.81 4.57
568 607 5.221461 CGGAGGGAGTACTAATTAAGTGCAT 60.221 44.000 0.00 0.00 42.81 3.96
587 626 6.025896 GTGCATGTACAATGTTGAGAAGATG 58.974 40.000 9.26 0.00 0.00 2.90
610 649 3.637229 GTCTTCTCTTGATCATCCCCGTA 59.363 47.826 0.00 0.00 0.00 4.02
631 670 8.630917 CCCGTAATCTAGTCTAGAGATGAAAAA 58.369 37.037 14.79 0.00 38.38 1.94
694 733 8.036273 TGACATTTAGGATAAGGAACGAAAAC 57.964 34.615 0.00 0.00 0.00 2.43
695 734 7.662258 TGACATTTAGGATAAGGAACGAAAACA 59.338 33.333 0.00 0.00 0.00 2.83
707 746 8.797266 AAGGAACGAAAACATTGTTTTATCTC 57.203 30.769 23.62 18.58 35.70 2.75
709 748 6.304683 GGAACGAAAACATTGTTTTATCTCCG 59.695 38.462 23.62 22.44 35.70 4.63
869 1020 1.699083 TGAAGACTCCACATGCTCCAA 59.301 47.619 0.00 0.00 0.00 3.53
878 1029 1.610086 CATGCTCCAAAGGGCCCAA 60.610 57.895 27.56 2.28 0.00 4.12
934 1085 2.335712 GCCTCCTTTGCTCCGTTGG 61.336 63.158 0.00 0.00 0.00 3.77
969 1120 5.665459 AGGAGAAGGATGATGAGTTAAACG 58.335 41.667 0.00 0.00 0.00 3.60
1096 1247 3.875727 CTCCCTGCTATTGTGATGTTCAG 59.124 47.826 0.00 0.00 0.00 3.02
1183 1334 2.321263 ATCTCCACATGCGGCCTCAG 62.321 60.000 0.18 0.00 0.00 3.35
1220 1371 1.283321 GGATTCTCCACCAAGAAGGCT 59.717 52.381 0.00 0.00 43.14 4.58
1419 1570 9.866798 ACTATATATCGTCTATGTCGTTCTGTA 57.133 33.333 0.00 0.00 0.00 2.74
1431 1582 7.924103 ATGTCGTTCTGTATTTTTGGTTTTC 57.076 32.000 0.00 0.00 0.00 2.29
1432 1583 7.090953 TGTCGTTCTGTATTTTTGGTTTTCT 57.909 32.000 0.00 0.00 0.00 2.52
1570 1725 3.808174 GGCCACCTAGAATCGTTAATGAC 59.192 47.826 0.00 0.00 0.00 3.06
1649 1804 5.424757 TCCTAATGTAAGTTGAATCCGTGG 58.575 41.667 0.00 0.00 0.00 4.94
1662 1817 5.309638 TGAATCCGTGGTATGAACTTTTGA 58.690 37.500 0.00 0.00 0.00 2.69
1700 1861 1.079057 GGTTGAGCTCGAAGACCCC 60.079 63.158 4.86 0.00 0.00 4.95
1865 2028 9.760660 CTTGTGTCTTGTCTTTTATAGCATAAC 57.239 33.333 0.00 0.00 0.00 1.89
2202 2381 2.324541 GAGCAGATGACTCACCCCTAT 58.675 52.381 0.00 0.00 34.18 2.57
2358 3001 9.113838 CATTAAATACTGCAGGTCAAAGATAGT 57.886 33.333 19.93 0.00 0.00 2.12
2613 3256 0.523072 GTCGCACATTGTCTTGGCAT 59.477 50.000 0.00 0.00 0.00 4.40
2614 3257 0.522626 TCGCACATTGTCTTGGCATG 59.477 50.000 0.00 0.00 0.00 4.06
2615 3258 1.074319 CGCACATTGTCTTGGCATGC 61.074 55.000 9.90 9.90 0.00 4.06
2630 3274 2.603560 GGCATGCAGTTCGTCTACTTAC 59.396 50.000 21.36 0.00 0.00 2.34
2954 4472 1.000274 GGGCTTGATGTTTGGTGTGAC 60.000 52.381 0.00 0.00 0.00 3.67
2996 4522 6.748658 TGATACTTGTTCAGTTATAACGGTCG 59.251 38.462 14.25 3.93 36.88 4.79
3244 6418 9.144747 AGCATATATAGTTCAATTAGCTTGTCG 57.855 33.333 0.00 0.00 36.20 4.35
3416 6600 1.067142 TCAGGTACAGCCGATGTTCAC 60.067 52.381 0.00 0.00 39.96 3.18
3642 6848 7.032377 TGGTTAAATTCCAATTGGTTTTTGC 57.968 32.000 23.76 17.86 36.34 3.68
3643 6849 6.039829 TGGTTAAATTCCAATTGGTTTTTGCC 59.960 34.615 23.76 23.58 36.34 4.52
3644 6850 6.264292 GGTTAAATTCCAATTGGTTTTTGCCT 59.736 34.615 23.76 6.80 36.34 4.75
3645 6851 7.445707 GGTTAAATTCCAATTGGTTTTTGCCTA 59.554 33.333 23.76 7.46 36.34 3.93
3646 6852 9.008965 GTTAAATTCCAATTGGTTTTTGCCTAT 57.991 29.630 23.76 5.87 36.34 2.57
3649 6855 9.579932 AAATTCCAATTGGTTTTTGCCTATAAA 57.420 25.926 23.76 6.62 36.34 1.40
3650 6856 9.752228 AATTCCAATTGGTTTTTGCCTATAAAT 57.248 25.926 23.76 8.62 36.34 1.40
3651 6857 8.558973 TTCCAATTGGTTTTTGCCTATAAATG 57.441 30.769 23.76 0.00 36.34 2.32
3652 6858 7.911651 TCCAATTGGTTTTTGCCTATAAATGA 58.088 30.769 23.76 0.00 36.34 2.57
3653 6859 8.378565 TCCAATTGGTTTTTGCCTATAAATGAA 58.621 29.630 23.76 0.00 36.34 2.57
3654 6860 9.007901 CCAATTGGTTTTTGCCTATAAATGAAA 57.992 29.630 16.90 0.00 0.00 2.69
3656 6862 9.791801 AATTGGTTTTTGCCTATAAATGAAAGT 57.208 25.926 0.00 0.00 0.00 2.66
3657 6863 8.600449 TTGGTTTTTGCCTATAAATGAAAGTG 57.400 30.769 0.00 0.00 0.00 3.16
3658 6864 7.957002 TGGTTTTTGCCTATAAATGAAAGTGA 58.043 30.769 0.00 0.00 0.00 3.41
3659 6865 8.424918 TGGTTTTTGCCTATAAATGAAAGTGAA 58.575 29.630 0.00 0.00 0.00 3.18
3660 6866 9.267084 GGTTTTTGCCTATAAATGAAAGTGAAA 57.733 29.630 0.00 0.00 0.00 2.69
3664 6870 9.691362 TTTGCCTATAAATGAAAGTGAAAGTTC 57.309 29.630 0.00 0.00 0.00 3.01
3665 6871 8.402798 TGCCTATAAATGAAAGTGAAAGTTCA 57.597 30.769 0.00 0.00 38.09 3.18
3666 6872 8.514594 TGCCTATAAATGAAAGTGAAAGTTCAG 58.485 33.333 0.00 0.00 37.19 3.02
3667 6873 8.515414 GCCTATAAATGAAAGTGAAAGTTCAGT 58.485 33.333 0.00 0.00 42.40 3.41
3671 6877 7.548196 AAATGAAAGTGAAAGTTCAGTACGA 57.452 32.000 1.87 0.00 39.82 3.43
3672 6878 7.548196 AATGAAAGTGAAAGTTCAGTACGAA 57.452 32.000 1.87 0.00 39.82 3.85
3684 6890 2.105006 AGTACGAACTGGTAGAGCGA 57.895 50.000 0.00 0.00 33.57 4.93
3685 6891 2.008329 AGTACGAACTGGTAGAGCGAG 58.992 52.381 0.00 0.00 33.57 5.03
3686 6892 2.005451 GTACGAACTGGTAGAGCGAGA 58.995 52.381 0.00 0.00 0.00 4.04
3687 6893 1.088306 ACGAACTGGTAGAGCGAGAG 58.912 55.000 0.00 0.00 0.00 3.20
3701 6907 2.500509 CGAGAGCAGCTAGTTTAGGG 57.499 55.000 0.00 0.00 0.00 3.53
3702 6908 1.537135 CGAGAGCAGCTAGTTTAGGGC 60.537 57.143 0.00 0.00 0.00 5.19
3703 6909 1.760029 GAGAGCAGCTAGTTTAGGGCT 59.240 52.381 0.00 0.00 36.70 5.19
3704 6910 2.169561 GAGAGCAGCTAGTTTAGGGCTT 59.830 50.000 0.00 0.00 33.74 4.35
3705 6911 2.169561 AGAGCAGCTAGTTTAGGGCTTC 59.830 50.000 0.00 0.00 33.74 3.86
3706 6912 2.169561 GAGCAGCTAGTTTAGGGCTTCT 59.830 50.000 0.00 0.00 32.85 2.85
3707 6913 2.573915 AGCAGCTAGTTTAGGGCTTCTT 59.426 45.455 0.00 0.00 33.74 2.52
3708 6914 3.009584 AGCAGCTAGTTTAGGGCTTCTTT 59.990 43.478 0.00 0.00 33.74 2.52
3709 6915 3.127721 GCAGCTAGTTTAGGGCTTCTTTG 59.872 47.826 0.00 0.00 33.74 2.77
3710 6916 4.579869 CAGCTAGTTTAGGGCTTCTTTGA 58.420 43.478 0.00 0.00 33.74 2.69
3711 6917 5.189180 CAGCTAGTTTAGGGCTTCTTTGAT 58.811 41.667 0.00 0.00 33.74 2.57
3712 6918 5.649831 CAGCTAGTTTAGGGCTTCTTTGATT 59.350 40.000 0.00 0.00 33.74 2.57
3713 6919 5.883115 AGCTAGTTTAGGGCTTCTTTGATTC 59.117 40.000 0.00 0.00 31.81 2.52
3714 6920 5.648092 GCTAGTTTAGGGCTTCTTTGATTCA 59.352 40.000 0.00 0.00 0.00 2.57
3715 6921 6.151144 GCTAGTTTAGGGCTTCTTTGATTCAA 59.849 38.462 0.00 0.00 0.00 2.69
3716 6922 6.976934 AGTTTAGGGCTTCTTTGATTCAAA 57.023 33.333 11.19 11.19 0.00 2.69
3730 6936 7.838079 TTTGATTCAAAGGATTCTCAAAGGA 57.162 32.000 7.74 0.00 31.21 3.36
3731 6937 7.838079 TTGATTCAAAGGATTCTCAAAGGAA 57.162 32.000 0.00 0.00 0.00 3.36
3732 6938 8.426569 TTGATTCAAAGGATTCTCAAAGGAAT 57.573 30.769 0.00 0.00 38.47 3.01
3733 6939 8.426569 TGATTCAAAGGATTCTCAAAGGAATT 57.573 30.769 0.00 0.00 36.24 2.17
3734 6940 8.873144 TGATTCAAAGGATTCTCAAAGGAATTT 58.127 29.630 0.00 0.00 36.24 1.82
3735 6941 9.716531 GATTCAAAGGATTCTCAAAGGAATTTT 57.283 29.630 0.00 0.00 36.24 1.82
3736 6942 8.891671 TTCAAAGGATTCTCAAAGGAATTTTG 57.108 30.769 0.00 0.00 46.09 2.44
3737 6943 7.444299 TCAAAGGATTCTCAAAGGAATTTTGG 58.556 34.615 11.22 1.84 45.05 3.28
3738 6944 7.289782 TCAAAGGATTCTCAAAGGAATTTTGGA 59.710 33.333 11.22 3.43 45.05 3.53
3739 6945 6.847421 AGGATTCTCAAAGGAATTTTGGAG 57.153 37.500 0.37 0.00 45.05 3.86
3740 6946 5.718607 AGGATTCTCAAAGGAATTTTGGAGG 59.281 40.000 0.37 0.00 45.05 4.30
3741 6947 5.716703 GGATTCTCAAAGGAATTTTGGAGGA 59.283 40.000 0.37 0.00 45.05 3.71
3742 6948 6.382282 GGATTCTCAAAGGAATTTTGGAGGAT 59.618 38.462 0.37 0.00 45.05 3.24
3743 6949 7.093156 GGATTCTCAAAGGAATTTTGGAGGATT 60.093 37.037 0.37 0.00 45.05 3.01
3744 6950 6.840780 TCTCAAAGGAATTTTGGAGGATTC 57.159 37.500 0.37 0.00 45.05 2.52
3745 6951 6.555711 TCTCAAAGGAATTTTGGAGGATTCT 58.444 36.000 0.37 0.00 45.05 2.40
3746 6952 7.698912 TCTCAAAGGAATTTTGGAGGATTCTA 58.301 34.615 0.37 0.00 45.05 2.10
3747 6953 8.170061 TCTCAAAGGAATTTTGGAGGATTCTAA 58.830 33.333 0.37 0.00 45.05 2.10
3748 6954 8.899887 TCAAAGGAATTTTGGAGGATTCTAAT 57.100 30.769 0.37 0.00 45.05 1.73
3749 6955 8.971073 TCAAAGGAATTTTGGAGGATTCTAATC 58.029 33.333 0.37 0.00 45.05 1.75
3750 6956 8.200120 CAAAGGAATTTTGGAGGATTCTAATCC 58.800 37.037 12.94 12.94 46.08 3.01
3779 6985 8.310406 GGAATTTTTCCTATCTTGGTTGTTTG 57.690 34.615 0.00 0.00 46.57 2.93
3780 6986 8.147704 GGAATTTTTCCTATCTTGGTTGTTTGA 58.852 33.333 0.00 0.00 46.57 2.69
3781 6987 9.710900 GAATTTTTCCTATCTTGGTTGTTTGAT 57.289 29.630 0.00 0.00 0.00 2.57
3783 6989 9.710900 ATTTTTCCTATCTTGGTTGTTTGATTC 57.289 29.630 0.00 0.00 0.00 2.52
3784 6990 6.494893 TTCCTATCTTGGTTGTTTGATTCG 57.505 37.500 0.00 0.00 0.00 3.34
3785 6991 5.556915 TCCTATCTTGGTTGTTTGATTCGT 58.443 37.500 0.00 0.00 0.00 3.85
3786 6992 6.703319 TCCTATCTTGGTTGTTTGATTCGTA 58.297 36.000 0.00 0.00 0.00 3.43
3787 6993 6.816640 TCCTATCTTGGTTGTTTGATTCGTAG 59.183 38.462 0.00 0.00 0.00 3.51
3788 6994 5.880054 ATCTTGGTTGTTTGATTCGTAGG 57.120 39.130 0.00 0.00 0.00 3.18
3789 6995 4.963373 TCTTGGTTGTTTGATTCGTAGGA 58.037 39.130 0.00 0.00 0.00 2.94
3790 6996 5.556915 TCTTGGTTGTTTGATTCGTAGGAT 58.443 37.500 0.00 0.00 0.00 3.24
3791 6997 6.001460 TCTTGGTTGTTTGATTCGTAGGATT 58.999 36.000 0.00 0.00 0.00 3.01
3792 6998 5.621197 TGGTTGTTTGATTCGTAGGATTG 57.379 39.130 0.00 0.00 0.00 2.67
3793 6999 5.067273 TGGTTGTTTGATTCGTAGGATTGT 58.933 37.500 0.00 0.00 0.00 2.71
3794 7000 6.231951 TGGTTGTTTGATTCGTAGGATTGTA 58.768 36.000 0.00 0.00 0.00 2.41
3795 7001 6.711194 TGGTTGTTTGATTCGTAGGATTGTAA 59.289 34.615 0.00 0.00 0.00 2.41
3796 7002 7.228906 TGGTTGTTTGATTCGTAGGATTGTAAA 59.771 33.333 0.00 0.00 0.00 2.01
3797 7003 7.536281 GGTTGTTTGATTCGTAGGATTGTAAAC 59.464 37.037 0.00 0.00 0.00 2.01
3798 7004 7.136289 TGTTTGATTCGTAGGATTGTAAACC 57.864 36.000 0.00 0.00 0.00 3.27
3799 7005 6.711194 TGTTTGATTCGTAGGATTGTAAACCA 59.289 34.615 0.00 0.00 0.00 3.67
3800 7006 7.392113 TGTTTGATTCGTAGGATTGTAAACCAT 59.608 33.333 0.00 0.00 0.00 3.55
3801 7007 8.885722 GTTTGATTCGTAGGATTGTAAACCATA 58.114 33.333 0.00 0.00 0.00 2.74
3802 7008 8.657074 TTGATTCGTAGGATTGTAAACCATAG 57.343 34.615 0.00 0.00 0.00 2.23
3803 7009 7.214381 TGATTCGTAGGATTGTAAACCATAGG 58.786 38.462 0.00 0.00 0.00 2.57
3804 7010 6.795144 TTCGTAGGATTGTAAACCATAGGA 57.205 37.500 0.00 0.00 0.00 2.94
3805 7011 6.795144 TCGTAGGATTGTAAACCATAGGAA 57.205 37.500 0.00 0.00 0.00 3.36
3806 7012 7.369551 TCGTAGGATTGTAAACCATAGGAAT 57.630 36.000 0.00 0.00 0.00 3.01
3807 7013 7.798071 TCGTAGGATTGTAAACCATAGGAATT 58.202 34.615 0.00 0.00 0.00 2.17
3808 7014 8.269317 TCGTAGGATTGTAAACCATAGGAATTT 58.731 33.333 0.00 0.00 0.00 1.82
3809 7015 8.899771 CGTAGGATTGTAAACCATAGGAATTTT 58.100 33.333 0.00 0.00 0.00 1.82
3838 7044 8.826710 CGTAGGATTTATTTGCACTAGATTTCA 58.173 33.333 0.00 0.00 0.00 2.69
3847 7053 7.994425 TTTGCACTAGATTTCATAGGAAACA 57.006 32.000 4.42 0.00 45.22 2.83
3848 7054 8.579850 TTTGCACTAGATTTCATAGGAAACAT 57.420 30.769 4.42 0.00 45.22 2.71
3849 7055 8.579850 TTGCACTAGATTTCATAGGAAACATT 57.420 30.769 4.42 0.00 45.22 2.71
3850 7056 8.213518 TGCACTAGATTTCATAGGAAACATTC 57.786 34.615 4.42 0.00 45.22 2.67
3864 7070 4.809673 GAAACATTCCATCCACTCAAACC 58.190 43.478 0.00 0.00 0.00 3.27
3865 7071 3.814504 ACATTCCATCCACTCAAACCT 57.185 42.857 0.00 0.00 0.00 3.50
3866 7072 3.690460 ACATTCCATCCACTCAAACCTC 58.310 45.455 0.00 0.00 0.00 3.85
3867 7073 3.331889 ACATTCCATCCACTCAAACCTCT 59.668 43.478 0.00 0.00 0.00 3.69
3868 7074 4.202609 ACATTCCATCCACTCAAACCTCTT 60.203 41.667 0.00 0.00 0.00 2.85
3869 7075 4.453480 TTCCATCCACTCAAACCTCTTT 57.547 40.909 0.00 0.00 0.00 2.52
3870 7076 4.453480 TCCATCCACTCAAACCTCTTTT 57.547 40.909 0.00 0.00 0.00 2.27
3871 7077 5.576563 TCCATCCACTCAAACCTCTTTTA 57.423 39.130 0.00 0.00 0.00 1.52
3872 7078 5.947663 TCCATCCACTCAAACCTCTTTTAA 58.052 37.500 0.00 0.00 0.00 1.52
3873 7079 6.369629 TCCATCCACTCAAACCTCTTTTAAA 58.630 36.000 0.00 0.00 0.00 1.52
3874 7080 6.490040 TCCATCCACTCAAACCTCTTTTAAAG 59.510 38.462 0.00 0.00 0.00 1.85
3875 7081 6.490040 CCATCCACTCAAACCTCTTTTAAAGA 59.510 38.462 7.22 7.22 35.87 2.52
3876 7082 7.014230 CCATCCACTCAAACCTCTTTTAAAGAA 59.986 37.037 8.82 0.00 37.02 2.52
3877 7083 8.579863 CATCCACTCAAACCTCTTTTAAAGAAT 58.420 33.333 8.82 0.00 37.02 2.40
3878 7084 8.166422 TCCACTCAAACCTCTTTTAAAGAATC 57.834 34.615 8.82 0.00 37.02 2.52
3879 7085 7.230712 TCCACTCAAACCTCTTTTAAAGAATCC 59.769 37.037 8.82 0.00 37.02 3.01
3880 7086 7.231519 CCACTCAAACCTCTTTTAAAGAATCCT 59.768 37.037 8.82 0.00 37.02 3.24
3881 7087 9.284968 CACTCAAACCTCTTTTAAAGAATCCTA 57.715 33.333 8.82 0.00 37.02 2.94
3882 7088 9.862149 ACTCAAACCTCTTTTAAAGAATCCTAA 57.138 29.630 8.82 0.00 37.02 2.69
3884 7090 9.862149 TCAAACCTCTTTTAAAGAATCCTAAGT 57.138 29.630 8.82 0.00 37.02 2.24
3909 7115 7.928908 TTTTTCTATGCACAATCAAACACTC 57.071 32.000 0.00 0.00 0.00 3.51
3910 7116 4.926860 TCTATGCACAATCAAACACTCG 57.073 40.909 0.00 0.00 0.00 4.18
3911 7117 4.314961 TCTATGCACAATCAAACACTCGT 58.685 39.130 0.00 0.00 0.00 4.18
3912 7118 5.474825 TCTATGCACAATCAAACACTCGTA 58.525 37.500 0.00 0.00 0.00 3.43
3913 7119 3.870723 TGCACAATCAAACACTCGTAC 57.129 42.857 0.00 0.00 0.00 3.67
3914 7120 3.198872 TGCACAATCAAACACTCGTACA 58.801 40.909 0.00 0.00 0.00 2.90
3915 7121 3.623510 TGCACAATCAAACACTCGTACAA 59.376 39.130 0.00 0.00 0.00 2.41
3916 7122 4.274705 TGCACAATCAAACACTCGTACAAT 59.725 37.500 0.00 0.00 0.00 2.71
3917 7123 4.846137 GCACAATCAAACACTCGTACAATC 59.154 41.667 0.00 0.00 0.00 2.67
3918 7124 5.382303 CACAATCAAACACTCGTACAATCC 58.618 41.667 0.00 0.00 0.00 3.01
3919 7125 5.179368 CACAATCAAACACTCGTACAATCCT 59.821 40.000 0.00 0.00 0.00 3.24
3920 7126 5.179368 ACAATCAAACACTCGTACAATCCTG 59.821 40.000 0.00 0.00 0.00 3.86
3921 7127 4.330944 TCAAACACTCGTACAATCCTGT 57.669 40.909 0.00 0.00 39.75 4.00
3922 7128 5.456548 TCAAACACTCGTACAATCCTGTA 57.543 39.130 0.00 0.00 36.96 2.74
3923 7129 5.466819 TCAAACACTCGTACAATCCTGTAG 58.533 41.667 0.00 0.00 38.73 2.74
3924 7130 4.451629 AACACTCGTACAATCCTGTAGG 57.548 45.455 0.00 0.00 42.66 3.18
3937 7143 3.427573 TCCTGTAGGATTCAAGACGACA 58.572 45.455 0.00 0.00 39.78 4.35
3938 7144 4.023980 TCCTGTAGGATTCAAGACGACAT 58.976 43.478 0.00 0.00 39.78 3.06
3939 7145 4.466370 TCCTGTAGGATTCAAGACGACATT 59.534 41.667 0.00 0.00 39.78 2.71
3940 7146 4.806247 CCTGTAGGATTCAAGACGACATTC 59.194 45.833 0.00 0.00 37.39 2.67
3941 7147 4.755411 TGTAGGATTCAAGACGACATTCC 58.245 43.478 0.00 0.00 0.00 3.01
3942 7148 3.981071 AGGATTCAAGACGACATTCCA 57.019 42.857 0.00 0.00 0.00 3.53
3943 7149 3.600388 AGGATTCAAGACGACATTCCAC 58.400 45.455 0.00 0.00 0.00 4.02
3944 7150 3.261897 AGGATTCAAGACGACATTCCACT 59.738 43.478 0.00 0.00 0.00 4.00
3945 7151 3.619038 GGATTCAAGACGACATTCCACTC 59.381 47.826 0.00 0.00 0.00 3.51
3946 7152 4.499183 GATTCAAGACGACATTCCACTCT 58.501 43.478 0.00 0.00 0.00 3.24
3947 7153 5.394224 GGATTCAAGACGACATTCCACTCTA 60.394 44.000 0.00 0.00 0.00 2.43
3948 7154 5.462530 TTCAAGACGACATTCCACTCTAA 57.537 39.130 0.00 0.00 0.00 2.10
3949 7155 5.661056 TCAAGACGACATTCCACTCTAAT 57.339 39.130 0.00 0.00 0.00 1.73
3950 7156 5.651530 TCAAGACGACATTCCACTCTAATC 58.348 41.667 0.00 0.00 0.00 1.75
3951 7157 4.657436 AGACGACATTCCACTCTAATCC 57.343 45.455 0.00 0.00 0.00 3.01
3952 7158 3.385111 AGACGACATTCCACTCTAATCCC 59.615 47.826 0.00 0.00 0.00 3.85
3953 7159 3.104512 ACGACATTCCACTCTAATCCCA 58.895 45.455 0.00 0.00 0.00 4.37
3954 7160 3.711704 ACGACATTCCACTCTAATCCCAT 59.288 43.478 0.00 0.00 0.00 4.00
3955 7161 4.060900 CGACATTCCACTCTAATCCCATG 58.939 47.826 0.00 0.00 0.00 3.66
3956 7162 4.443457 CGACATTCCACTCTAATCCCATGT 60.443 45.833 0.00 0.00 0.00 3.21
3957 7163 5.440610 GACATTCCACTCTAATCCCATGTT 58.559 41.667 0.00 0.00 0.00 2.71
3958 7164 5.831103 ACATTCCACTCTAATCCCATGTTT 58.169 37.500 0.00 0.00 0.00 2.83
3959 7165 6.256053 ACATTCCACTCTAATCCCATGTTTT 58.744 36.000 0.00 0.00 0.00 2.43
3960 7166 6.725834 ACATTCCACTCTAATCCCATGTTTTT 59.274 34.615 0.00 0.00 0.00 1.94
3961 7167 6.834168 TTCCACTCTAATCCCATGTTTTTC 57.166 37.500 0.00 0.00 0.00 2.29
3962 7168 5.261216 TCCACTCTAATCCCATGTTTTTCC 58.739 41.667 0.00 0.00 0.00 3.13
3963 7169 5.015178 TCCACTCTAATCCCATGTTTTTCCT 59.985 40.000 0.00 0.00 0.00 3.36
3964 7170 6.216662 TCCACTCTAATCCCATGTTTTTCCTA 59.783 38.462 0.00 0.00 0.00 2.94
3965 7171 7.062957 CCACTCTAATCCCATGTTTTTCCTAT 58.937 38.462 0.00 0.00 0.00 2.57
3966 7172 7.561356 CCACTCTAATCCCATGTTTTTCCTATT 59.439 37.037 0.00 0.00 0.00 1.73
3967 7173 8.624776 CACTCTAATCCCATGTTTTTCCTATTC 58.375 37.037 0.00 0.00 0.00 1.75
3968 7174 7.780271 ACTCTAATCCCATGTTTTTCCTATTCC 59.220 37.037 0.00 0.00 0.00 3.01
3969 7175 7.066781 TCTAATCCCATGTTTTTCCTATTCCC 58.933 38.462 0.00 0.00 0.00 3.97
3970 7176 3.626930 TCCCATGTTTTTCCTATTCCCG 58.373 45.455 0.00 0.00 0.00 5.14
3971 7177 2.100749 CCCATGTTTTTCCTATTCCCGC 59.899 50.000 0.00 0.00 0.00 6.13
3972 7178 2.223479 CCATGTTTTTCCTATTCCCGCG 60.223 50.000 0.00 0.00 0.00 6.46
3973 7179 2.188062 TGTTTTTCCTATTCCCGCGT 57.812 45.000 4.92 0.00 0.00 6.01
3974 7180 2.506444 TGTTTTTCCTATTCCCGCGTT 58.494 42.857 4.92 0.00 0.00 4.84
3975 7181 2.885894 TGTTTTTCCTATTCCCGCGTTT 59.114 40.909 4.92 0.00 0.00 3.60
3976 7182 3.318557 TGTTTTTCCTATTCCCGCGTTTT 59.681 39.130 4.92 0.00 0.00 2.43
3977 7183 3.562567 TTTTCCTATTCCCGCGTTTTG 57.437 42.857 4.92 0.00 0.00 2.44
3978 7184 1.455248 TTCCTATTCCCGCGTTTTGG 58.545 50.000 4.92 0.00 0.00 3.28
3979 7185 0.614294 TCCTATTCCCGCGTTTTGGA 59.386 50.000 4.92 0.51 0.00 3.53
3980 7186 1.003349 TCCTATTCCCGCGTTTTGGAA 59.997 47.619 15.43 15.43 44.34 3.53
3981 7187 1.813786 CCTATTCCCGCGTTTTGGAAA 59.186 47.619 16.73 7.35 43.50 3.13
3982 7188 2.425668 CCTATTCCCGCGTTTTGGAAAT 59.574 45.455 16.73 9.31 43.50 2.17
3983 7189 2.647529 ATTCCCGCGTTTTGGAAATC 57.352 45.000 16.73 0.00 43.50 2.17
3984 7190 0.599060 TTCCCGCGTTTTGGAAATCC 59.401 50.000 11.48 0.00 37.69 3.01
3985 7191 0.250989 TCCCGCGTTTTGGAAATCCT 60.251 50.000 4.92 0.00 36.82 3.24
3986 7192 1.003349 TCCCGCGTTTTGGAAATCCTA 59.997 47.619 4.92 0.00 36.82 2.94
3987 7193 1.131693 CCCGCGTTTTGGAAATCCTAC 59.868 52.381 4.92 0.00 36.82 3.18
3988 7194 1.201987 CCGCGTTTTGGAAATCCTACG 60.202 52.381 4.92 13.93 38.26 3.51
3989 7195 1.727880 CGCGTTTTGGAAATCCTACGA 59.272 47.619 19.17 0.00 37.82 3.43
3990 7196 2.158058 CGCGTTTTGGAAATCCTACGAA 59.842 45.455 19.17 0.00 37.82 3.85
3991 7197 3.181514 CGCGTTTTGGAAATCCTACGAAT 60.182 43.478 19.17 0.00 37.82 3.34
3992 7198 4.340263 GCGTTTTGGAAATCCTACGAATC 58.660 43.478 19.17 5.32 37.82 2.52
3993 7199 4.142773 GCGTTTTGGAAATCCTACGAATCA 60.143 41.667 19.17 0.00 37.82 2.57
3994 7200 5.618195 GCGTTTTGGAAATCCTACGAATCAA 60.618 40.000 19.17 0.00 37.82 2.57
3995 7201 6.375377 CGTTTTGGAAATCCTACGAATCAAA 58.625 36.000 13.35 0.00 37.82 2.69
3996 7202 6.523201 CGTTTTGGAAATCCTACGAATCAAAG 59.477 38.462 13.35 0.00 37.82 2.77
3997 7203 7.572353 CGTTTTGGAAATCCTACGAATCAAAGA 60.572 37.037 13.35 0.00 37.82 2.52
3998 7204 6.985188 TTGGAAATCCTACGAATCAAAGAG 57.015 37.500 0.44 0.00 36.82 2.85
3999 7205 5.428253 TGGAAATCCTACGAATCAAAGAGG 58.572 41.667 0.44 0.00 36.82 3.69
4000 7206 4.273724 GGAAATCCTACGAATCAAAGAGGC 59.726 45.833 0.00 0.00 0.00 4.70
4001 7207 2.981859 TCCTACGAATCAAAGAGGCC 57.018 50.000 0.00 0.00 0.00 5.19
4002 7208 1.485066 TCCTACGAATCAAAGAGGCCC 59.515 52.381 0.00 0.00 0.00 5.80
4003 7209 1.486726 CCTACGAATCAAAGAGGCCCT 59.513 52.381 0.00 0.00 0.00 5.19
4004 7210 2.092914 CCTACGAATCAAAGAGGCCCTT 60.093 50.000 0.00 0.00 36.47 3.95
4005 7211 3.134081 CCTACGAATCAAAGAGGCCCTTA 59.866 47.826 0.00 0.00 34.00 2.69
4006 7212 3.268023 ACGAATCAAAGAGGCCCTTAG 57.732 47.619 0.00 0.00 34.00 2.18
4007 7213 2.838202 ACGAATCAAAGAGGCCCTTAGA 59.162 45.455 0.00 0.00 34.00 2.10
4008 7214 3.263425 ACGAATCAAAGAGGCCCTTAGAA 59.737 43.478 0.00 0.00 34.00 2.10
4009 7215 3.873952 CGAATCAAAGAGGCCCTTAGAAG 59.126 47.826 0.00 0.00 34.00 2.85
4010 7216 3.941704 ATCAAAGAGGCCCTTAGAAGG 57.058 47.619 0.00 0.92 46.06 3.46
4174 7593 3.369052 CGGCTGTTGAGGAAGGTATTGTA 60.369 47.826 0.00 0.00 0.00 2.41
4216 7635 3.058293 TCGTAAGGCTTGCATCAAAAGTG 60.058 43.478 15.63 0.00 38.47 3.16
4302 7723 4.778904 TCTTTCGCAAGGTTTCAATAACG 58.221 39.130 0.00 0.00 38.47 3.18
4602 8026 1.165270 ACAATGCCGCTACAGGAAAC 58.835 50.000 0.00 0.00 0.00 2.78
4991 8428 7.951530 AGCTCAAACAAAAATTAACTGGATG 57.048 32.000 0.00 0.00 0.00 3.51
5420 8857 7.905604 TGCATGGAATATTGTAGCTACATAC 57.094 36.000 26.54 13.41 35.89 2.39
5421 8858 6.878923 TGCATGGAATATTGTAGCTACATACC 59.121 38.462 26.54 21.90 35.89 2.73
5436 8873 5.643777 GCTACATACCATTCACAGTTGTTCT 59.356 40.000 0.00 0.00 0.00 3.01
5458 8895 7.033530 TCTTTTCGAGCATTTGTTCCTTAAA 57.966 32.000 0.00 0.00 0.00 1.52
5459 8896 6.915843 TCTTTTCGAGCATTTGTTCCTTAAAC 59.084 34.615 0.00 0.00 38.43 2.01
5460 8897 5.759506 TTCGAGCATTTGTTCCTTAAACA 57.240 34.783 0.00 0.00 46.11 2.83
5482 8919 1.664151 GCGTAGGCTTGTGGTAATGAC 59.336 52.381 0.00 0.00 35.83 3.06
5485 8922 2.094762 AGGCTTGTGGTAATGACGAC 57.905 50.000 0.00 0.00 35.03 4.34
5559 9005 3.552699 CACAGTTGTTCCTTTTGTGCATG 59.447 43.478 0.00 0.00 33.60 4.06
5598 9044 2.029623 AGGCTTGTGGCAATGATGATC 58.970 47.619 0.00 0.00 44.01 2.92
5630 9076 3.007506 TGGATTCGGTAGACTCTTTGCAA 59.992 43.478 0.00 0.00 0.00 4.08
5642 9088 2.618709 CTCTTTGCAAGGAAGGTTTCGT 59.381 45.455 12.74 0.00 0.00 3.85
5667 9113 0.534877 AGTGGTGCGACTTGATTGCA 60.535 50.000 0.00 0.00 46.15 4.08
5710 9156 4.704540 ACATGGCGAATTGGTGATTAAAGA 59.295 37.500 0.00 0.00 0.00 2.52
5763 9209 2.116983 GAAGGGTCTGAGGCAGTGCA 62.117 60.000 18.61 0.00 32.61 4.57
5867 9313 6.552629 CAACTTAGTAGACTTACGCATCTCA 58.447 40.000 0.00 0.00 34.88 3.27
5872 9318 8.672823 TTAGTAGACTTACGCATCTCATAGAA 57.327 34.615 0.00 0.00 34.88 2.10
5873 9319 7.753309 AGTAGACTTACGCATCTCATAGAAT 57.247 36.000 0.00 0.00 34.88 2.40
5896 9342 3.537580 TGGTATAACCATTCTTCGGTGC 58.462 45.455 0.00 0.00 44.79 5.01
5916 9407 2.811104 CGTCGATGTGAAACTCGTTTG 58.189 47.619 0.00 0.00 38.20 2.93
5920 9411 4.149922 GTCGATGTGAAACTCGTTTGATGA 59.850 41.667 0.00 0.00 38.20 2.92
5926 9417 9.393249 GATGTGAAACTCGTTTGATGAATTTTA 57.607 29.630 0.00 0.00 38.04 1.52
5979 9478 1.609072 TGAGATATCCTGCTTCGGTCG 59.391 52.381 0.00 0.00 0.00 4.79
6041 9540 3.989817 GTGCAAGTCATGATTTTTCCCAC 59.010 43.478 0.00 2.36 0.00 4.61
6062 9561 1.360852 TCCGTTACCTTGGTACCCCTA 59.639 52.381 10.07 0.00 0.00 3.53
6077 9576 5.828328 GGTACCCCTATTCATTTCTGGAAAG 59.172 44.000 0.00 0.00 33.32 2.62
6078 9577 5.536497 ACCCCTATTCATTTCTGGAAAGT 57.464 39.130 2.29 0.00 33.32 2.66
6079 9578 5.264395 ACCCCTATTCATTTCTGGAAAGTG 58.736 41.667 2.29 2.00 33.32 3.16
6080 9579 4.646492 CCCCTATTCATTTCTGGAAAGTGG 59.354 45.833 2.29 0.00 33.32 4.00
6081 9580 5.509498 CCCTATTCATTTCTGGAAAGTGGA 58.491 41.667 2.29 0.00 33.32 4.02
6082 9581 5.951747 CCCTATTCATTTCTGGAAAGTGGAA 59.048 40.000 2.29 6.15 33.32 3.53
6083 9582 6.437162 CCCTATTCATTTCTGGAAAGTGGAAA 59.563 38.462 2.29 0.00 33.32 3.13
6084 9583 7.315890 CCTATTCATTTCTGGAAAGTGGAAAC 58.684 38.462 2.29 0.00 32.84 2.78
6157 9657 4.635765 TCAATAGCTGTAATGGTGAGTTGC 59.364 41.667 0.00 0.00 0.00 4.17
6187 9687 5.520649 GGAGGACGACTTGTTCTTATCAATC 59.479 44.000 0.00 0.00 36.16 2.67
6264 9779 5.491982 ACAGATTTCGTTTTCTCTGGCTAT 58.508 37.500 0.00 0.00 39.52 2.97
6310 9828 8.962679 TCGATTAACCAAGTAAGGCATTATTTT 58.037 29.630 0.00 0.00 0.00 1.82
6315 9833 7.775053 ACCAAGTAAGGCATTATTTTCAGAA 57.225 32.000 0.00 0.00 0.00 3.02
6365 9883 8.378115 TGGATCTGGAATCCAAAATAAAATGT 57.622 30.769 2.61 0.00 44.54 2.71
6366 9884 8.824783 TGGATCTGGAATCCAAAATAAAATGTT 58.175 29.630 2.61 0.00 44.54 2.71
6367 9885 9.671279 GGATCTGGAATCCAAAATAAAATGTTT 57.329 29.630 2.61 0.00 38.09 2.83
6370 9888 9.487790 TCTGGAATCCAAAATAAAATGTTTGTC 57.512 29.630 2.61 0.00 33.71 3.18
6371 9889 9.270640 CTGGAATCCAAAATAAAATGTTTGTCA 57.729 29.630 2.61 0.00 33.71 3.58
6372 9890 9.618890 TGGAATCCAAAATAAAATGTTTGTCAA 57.381 25.926 0.00 0.00 33.71 3.18
6373 9891 9.877137 GGAATCCAAAATAAAATGTTTGTCAAC 57.123 29.630 0.00 0.00 33.71 3.18
6437 9969 5.183713 CAGGAGTTGCTTCAACAAATATCCA 59.816 40.000 11.63 0.00 45.66 3.41
6476 10008 4.569162 TCAAGTGACAGTAAAACCGACAAG 59.431 41.667 0.00 0.00 0.00 3.16
6489 10021 2.104111 ACCGACAAGTTCACCATTCTCA 59.896 45.455 0.00 0.00 0.00 3.27
6529 10061 7.565680 AGTCAAGGAAGACTTTTTCTTAGTCA 58.434 34.615 0.00 0.00 46.26 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 167 7.430211 GTGGTGTGTTGTTTTAACTAGCTTAAC 59.570 37.037 0.00 0.00 0.00 2.01
170 180 8.635765 AGATAAGAATATGTGGTGTGTTGTTT 57.364 30.769 0.00 0.00 0.00 2.83
172 182 9.733556 TTAAGATAAGAATATGTGGTGTGTTGT 57.266 29.630 0.00 0.00 0.00 3.32
230 269 7.494952 GGAACTAACCATACATTGAACTCCTAC 59.505 40.741 0.00 0.00 0.00 3.18
317 356 0.999406 CTTAACGCGCACTACTGCAT 59.001 50.000 5.73 0.00 44.50 3.96
321 360 2.144482 AACACTTAACGCGCACTACT 57.856 45.000 5.73 0.00 0.00 2.57
358 397 1.666872 GCGTGTTAAGGTGGCGAGT 60.667 57.895 0.00 0.00 0.00 4.18
366 405 0.387622 TCGTCGGAAGCGTGTTAAGG 60.388 55.000 0.00 0.00 33.52 2.69
374 413 4.753877 TCGCAGTCGTCGGAAGCG 62.754 66.667 16.15 16.15 45.11 4.68
389 428 1.207593 CAAGCGAAAACCCTGCTCG 59.792 57.895 0.00 0.00 38.17 5.03
468 507 9.877178 CCCTTAATGATCTAAACGCTCTTATAT 57.123 33.333 0.00 0.00 0.00 0.86
469 508 9.085645 TCCCTTAATGATCTAAACGCTCTTATA 57.914 33.333 0.00 0.00 0.00 0.98
470 509 7.963532 TCCCTTAATGATCTAAACGCTCTTAT 58.036 34.615 0.00 0.00 0.00 1.73
471 510 7.069578 ACTCCCTTAATGATCTAAACGCTCTTA 59.930 37.037 0.00 0.00 0.00 2.10
472 511 6.127026 ACTCCCTTAATGATCTAAACGCTCTT 60.127 38.462 0.00 0.00 0.00 2.85
473 512 5.364157 ACTCCCTTAATGATCTAAACGCTCT 59.636 40.000 0.00 0.00 0.00 4.09
474 513 5.602628 ACTCCCTTAATGATCTAAACGCTC 58.397 41.667 0.00 0.00 0.00 5.03
475 514 5.615925 ACTCCCTTAATGATCTAAACGCT 57.384 39.130 0.00 0.00 0.00 5.07
476 515 5.405873 GCTACTCCCTTAATGATCTAAACGC 59.594 44.000 0.00 0.00 0.00 4.84
477 516 6.750148 AGCTACTCCCTTAATGATCTAAACG 58.250 40.000 0.00 0.00 0.00 3.60
478 517 6.864165 CGAGCTACTCCCTTAATGATCTAAAC 59.136 42.308 0.00 0.00 0.00 2.01
479 518 6.550108 ACGAGCTACTCCCTTAATGATCTAAA 59.450 38.462 0.00 0.00 0.00 1.85
480 519 6.069331 ACGAGCTACTCCCTTAATGATCTAA 58.931 40.000 0.00 0.00 0.00 2.10
481 520 5.632118 ACGAGCTACTCCCTTAATGATCTA 58.368 41.667 0.00 0.00 0.00 1.98
482 521 4.475345 ACGAGCTACTCCCTTAATGATCT 58.525 43.478 0.00 0.00 0.00 2.75
483 522 4.857509 ACGAGCTACTCCCTTAATGATC 57.142 45.455 0.00 0.00 0.00 2.92
484 523 6.324254 AGTTTACGAGCTACTCCCTTAATGAT 59.676 38.462 0.00 0.00 0.00 2.45
485 524 5.655532 AGTTTACGAGCTACTCCCTTAATGA 59.344 40.000 0.00 0.00 0.00 2.57
486 525 5.903810 AGTTTACGAGCTACTCCCTTAATG 58.096 41.667 0.00 0.00 0.00 1.90
487 526 6.832900 ACTAGTTTACGAGCTACTCCCTTAAT 59.167 38.462 0.00 0.00 0.00 1.40
488 527 6.183347 ACTAGTTTACGAGCTACTCCCTTAA 58.817 40.000 0.00 0.00 0.00 1.85
489 528 5.749462 ACTAGTTTACGAGCTACTCCCTTA 58.251 41.667 0.00 0.00 0.00 2.69
490 529 4.598022 ACTAGTTTACGAGCTACTCCCTT 58.402 43.478 0.00 0.00 0.00 3.95
491 530 4.233632 ACTAGTTTACGAGCTACTCCCT 57.766 45.455 0.00 0.00 0.00 4.20
492 531 5.122519 AGTACTAGTTTACGAGCTACTCCC 58.877 45.833 0.00 0.00 0.00 4.30
493 532 5.236263 GGAGTACTAGTTTACGAGCTACTCC 59.764 48.000 21.08 21.08 40.39 3.85
494 533 5.236263 GGGAGTACTAGTTTACGAGCTACTC 59.764 48.000 0.00 4.39 34.99 2.59
495 534 5.104569 AGGGAGTACTAGTTTACGAGCTACT 60.105 44.000 0.00 0.00 0.00 2.57
505 544 4.094476 TGCAAGCTAGGGAGTACTAGTTT 58.906 43.478 0.00 0.00 42.72 2.66
516 555 2.359900 AGATCGTTTTGCAAGCTAGGG 58.640 47.619 0.00 0.00 0.00 3.53
517 556 5.504665 CCATAAGATCGTTTTGCAAGCTAGG 60.505 44.000 0.00 0.00 0.00 3.02
518 557 5.504665 CCCATAAGATCGTTTTGCAAGCTAG 60.505 44.000 0.00 0.00 0.00 3.42
521 560 3.128589 TCCCATAAGATCGTTTTGCAAGC 59.871 43.478 0.00 0.00 0.00 4.01
522 561 4.662145 GTCCCATAAGATCGTTTTGCAAG 58.338 43.478 0.00 0.00 0.00 4.01
523 562 3.126171 CGTCCCATAAGATCGTTTTGCAA 59.874 43.478 0.00 0.00 0.00 4.08
524 563 2.675844 CGTCCCATAAGATCGTTTTGCA 59.324 45.455 0.00 0.00 0.00 4.08
525 564 2.031683 CCGTCCCATAAGATCGTTTTGC 59.968 50.000 0.00 0.00 0.00 3.68
526 565 3.527533 TCCGTCCCATAAGATCGTTTTG 58.472 45.455 0.00 0.00 0.00 2.44
527 566 3.431766 CCTCCGTCCCATAAGATCGTTTT 60.432 47.826 0.00 0.00 0.00 2.43
528 567 2.102588 CCTCCGTCCCATAAGATCGTTT 59.897 50.000 0.00 0.00 0.00 3.60
529 568 1.687123 CCTCCGTCCCATAAGATCGTT 59.313 52.381 0.00 0.00 0.00 3.85
532 571 1.896465 CTCCCTCCGTCCCATAAGATC 59.104 57.143 0.00 0.00 0.00 2.75
533 572 1.220750 ACTCCCTCCGTCCCATAAGAT 59.779 52.381 0.00 0.00 0.00 2.40
534 573 0.635009 ACTCCCTCCGTCCCATAAGA 59.365 55.000 0.00 0.00 0.00 2.10
535 574 1.962100 GTACTCCCTCCGTCCCATAAG 59.038 57.143 0.00 0.00 0.00 1.73
536 575 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
537 576 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
538 577 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
539 578 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
540 579 2.378378 ATTAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
541 580 4.892345 ACTTAATTAGTACTCCCTCCGTCC 59.108 45.833 0.00 0.00 34.56 4.79
542 581 5.735638 GCACTTAATTAGTACTCCCTCCGTC 60.736 48.000 0.00 0.00 34.56 4.79
543 582 4.099113 GCACTTAATTAGTACTCCCTCCGT 59.901 45.833 0.00 0.00 34.56 4.69
544 583 4.098960 TGCACTTAATTAGTACTCCCTCCG 59.901 45.833 0.00 0.00 34.56 4.63
545 584 5.609533 TGCACTTAATTAGTACTCCCTCC 57.390 43.478 0.00 0.00 34.56 4.30
546 585 6.583562 ACATGCACTTAATTAGTACTCCCTC 58.416 40.000 0.00 0.00 34.56 4.30
547 586 6.561519 ACATGCACTTAATTAGTACTCCCT 57.438 37.500 0.00 0.00 34.56 4.20
548 587 7.270047 TGTACATGCACTTAATTAGTACTCCC 58.730 38.462 0.00 0.00 34.56 4.30
549 588 8.712285 TTGTACATGCACTTAATTAGTACTCC 57.288 34.615 0.00 0.00 34.56 3.85
551 590 9.667107 ACATTGTACATGCACTTAATTAGTACT 57.333 29.630 0.00 0.00 34.56 2.73
554 593 9.008965 TCAACATTGTACATGCACTTAATTAGT 57.991 29.630 0.00 0.00 37.68 2.24
555 594 9.494479 CTCAACATTGTACATGCACTTAATTAG 57.506 33.333 0.00 0.00 0.00 1.73
556 595 9.225436 TCTCAACATTGTACATGCACTTAATTA 57.775 29.630 0.00 0.00 0.00 1.40
557 596 8.109705 TCTCAACATTGTACATGCACTTAATT 57.890 30.769 0.00 0.00 0.00 1.40
558 597 7.686438 TCTCAACATTGTACATGCACTTAAT 57.314 32.000 0.00 0.00 0.00 1.40
559 598 7.443879 TCTTCTCAACATTGTACATGCACTTAA 59.556 33.333 0.00 0.00 0.00 1.85
560 599 6.934083 TCTTCTCAACATTGTACATGCACTTA 59.066 34.615 0.00 0.00 0.00 2.24
561 600 5.764686 TCTTCTCAACATTGTACATGCACTT 59.235 36.000 0.00 0.00 0.00 3.16
562 601 5.308014 TCTTCTCAACATTGTACATGCACT 58.692 37.500 0.00 0.00 0.00 4.40
563 602 5.611796 TCTTCTCAACATTGTACATGCAC 57.388 39.130 0.00 0.00 0.00 4.57
564 603 5.124297 CCATCTTCTCAACATTGTACATGCA 59.876 40.000 0.00 0.00 0.00 3.96
565 604 5.124457 ACCATCTTCTCAACATTGTACATGC 59.876 40.000 0.00 0.00 0.00 4.06
566 605 6.596888 AGACCATCTTCTCAACATTGTACATG 59.403 38.462 0.00 0.00 0.00 3.21
567 606 6.715280 AGACCATCTTCTCAACATTGTACAT 58.285 36.000 0.00 0.00 0.00 2.29
568 607 6.114187 AGACCATCTTCTCAACATTGTACA 57.886 37.500 0.00 0.00 0.00 2.90
587 626 2.224161 CGGGGATGATCAAGAGAAGACC 60.224 54.545 0.00 0.00 0.00 3.85
694 733 7.764443 TCTCTTAGAACCGGAGATAAAACAATG 59.236 37.037 9.46 0.00 32.09 2.82
695 734 7.848128 TCTCTTAGAACCGGAGATAAAACAAT 58.152 34.615 9.46 0.00 32.09 2.71
782 823 7.605449 TGCCACGTATAGGATAATTACTAACC 58.395 38.462 0.00 0.00 0.00 2.85
784 825 9.027202 TGATGCCACGTATAGGATAATTACTAA 57.973 33.333 0.00 0.00 0.00 2.24
934 1085 7.296628 TCATCCTTCTCCTCTCTTAAATAGC 57.703 40.000 0.00 0.00 0.00 2.97
969 1120 3.699538 AGTGGAGGTTTCTTTGGTTTGTC 59.300 43.478 0.00 0.00 0.00 3.18
1122 1273 8.432013 AGCCATAGTCTATATCAATGTCACAAA 58.568 33.333 0.00 0.00 0.00 2.83
1131 1282 6.994421 TGGTGAAGCCATAGTCTATATCAA 57.006 37.500 0.00 0.00 43.61 2.57
1220 1371 1.074248 GGGCGAAACCAGGGAAAGA 59.926 57.895 0.00 0.00 42.05 2.52
1419 1570 8.785946 CAGAAATTGGCATAGAAAACCAAAAAT 58.214 29.630 0.00 0.00 46.01 1.82
1431 1582 8.827177 AAATATGCAATCAGAAATTGGCATAG 57.173 30.769 9.58 0.00 34.67 2.23
1432 1583 7.874016 GGAAATATGCAATCAGAAATTGGCATA 59.126 33.333 6.60 6.60 35.13 3.14
1570 1725 2.406130 TCTTTTGCTACCGTAACACCG 58.594 47.619 0.00 0.00 0.00 4.94
1649 1804 4.439776 GCCAACAACGTCAAAAGTTCATAC 59.560 41.667 0.00 0.00 0.00 2.39
1662 1817 0.319083 TGGTCGATAGCCAACAACGT 59.681 50.000 0.00 0.00 38.90 3.99
1700 1861 6.632834 CCAATTTAGCTCCAATATTTTCGACG 59.367 38.462 0.00 0.00 0.00 5.12
1902 2071 6.092807 GCACCTACAATCTGGAGAAAGTAAAG 59.907 42.308 0.00 0.00 26.39 1.85
2202 2381 4.037222 TCTCATGAATGGTAGTTAGGGCA 58.963 43.478 0.00 0.00 0.00 5.36
2358 3001 1.264020 GCAGCAACATCGACAAGTTCA 59.736 47.619 0.00 0.00 0.00 3.18
2613 3256 4.277672 ACTGAAGTAAGTAGACGAACTGCA 59.722 41.667 0.00 0.00 33.69 4.41
2614 3257 4.796369 ACTGAAGTAAGTAGACGAACTGC 58.204 43.478 0.00 0.00 0.00 4.40
2615 3258 6.523893 GCTAACTGAAGTAAGTAGACGAACTG 59.476 42.308 0.00 0.00 0.00 3.16
2630 3274 5.181009 TCATGGAGATTGTGCTAACTGAAG 58.819 41.667 0.00 0.00 0.00 3.02
2996 4522 1.198637 GACAGTGCCTGCATGAAGAAC 59.801 52.381 0.74 0.00 34.37 3.01
3244 6418 3.564342 GAGACACACACTTGCGCGC 62.564 63.158 27.26 27.26 0.00 6.86
3416 6600 8.341903 CCTAGTACATCAATAGATATCTCAGCG 58.658 40.741 8.95 0.00 31.88 5.18
3645 6851 9.268268 TCGTACTGAACTTTCACTTTCATTTAT 57.732 29.630 0.00 0.00 31.41 1.40
3646 6852 8.651391 TCGTACTGAACTTTCACTTTCATTTA 57.349 30.769 0.00 0.00 31.41 1.40
3647 6853 7.548196 TCGTACTGAACTTTCACTTTCATTT 57.452 32.000 0.00 0.00 31.41 2.32
3648 6854 7.548196 TTCGTACTGAACTTTCACTTTCATT 57.452 32.000 0.00 0.00 31.41 2.57
3665 6871 2.008329 CTCGCTCTACCAGTTCGTACT 58.992 52.381 0.00 0.00 34.00 2.73
3666 6872 2.005451 TCTCGCTCTACCAGTTCGTAC 58.995 52.381 0.00 0.00 0.00 3.67
3667 6873 2.277969 CTCTCGCTCTACCAGTTCGTA 58.722 52.381 0.00 0.00 0.00 3.43
3668 6874 1.088306 CTCTCGCTCTACCAGTTCGT 58.912 55.000 0.00 0.00 0.00 3.85
3669 6875 0.248296 GCTCTCGCTCTACCAGTTCG 60.248 60.000 0.00 0.00 0.00 3.95
3670 6876 0.811915 TGCTCTCGCTCTACCAGTTC 59.188 55.000 0.00 0.00 36.97 3.01
3671 6877 0.814457 CTGCTCTCGCTCTACCAGTT 59.186 55.000 0.00 0.00 36.97 3.16
3672 6878 1.662438 GCTGCTCTCGCTCTACCAGT 61.662 60.000 0.00 0.00 36.97 4.00
3673 6879 1.065600 GCTGCTCTCGCTCTACCAG 59.934 63.158 0.00 0.00 36.97 4.00
3674 6880 0.107165 TAGCTGCTCTCGCTCTACCA 60.107 55.000 4.91 0.00 38.86 3.25
3675 6881 0.591170 CTAGCTGCTCTCGCTCTACC 59.409 60.000 4.91 0.00 38.86 3.18
3676 6882 1.305201 ACTAGCTGCTCTCGCTCTAC 58.695 55.000 4.91 0.00 38.86 2.59
3677 6883 2.045561 AACTAGCTGCTCTCGCTCTA 57.954 50.000 4.91 0.00 38.86 2.43
3678 6884 1.181786 AAACTAGCTGCTCTCGCTCT 58.818 50.000 4.91 0.00 38.86 4.09
3679 6885 2.542824 CCTAAACTAGCTGCTCTCGCTC 60.543 54.545 4.91 0.00 38.86 5.03
3680 6886 1.407258 CCTAAACTAGCTGCTCTCGCT 59.593 52.381 4.91 0.00 41.35 4.93
3681 6887 1.537135 CCCTAAACTAGCTGCTCTCGC 60.537 57.143 4.91 0.00 0.00 5.03
3682 6888 1.537135 GCCCTAAACTAGCTGCTCTCG 60.537 57.143 4.91 0.00 0.00 4.04
3683 6889 1.760029 AGCCCTAAACTAGCTGCTCTC 59.240 52.381 4.91 0.00 34.99 3.20
3684 6890 1.872773 AGCCCTAAACTAGCTGCTCT 58.127 50.000 4.91 0.00 34.99 4.09
3685 6891 2.169561 AGAAGCCCTAAACTAGCTGCTC 59.830 50.000 4.91 0.00 38.11 4.26
3686 6892 2.192263 AGAAGCCCTAAACTAGCTGCT 58.808 47.619 7.57 7.57 37.71 4.24
3687 6893 2.700722 AGAAGCCCTAAACTAGCTGC 57.299 50.000 0.00 0.00 36.84 5.25
3688 6894 4.579869 TCAAAGAAGCCCTAAACTAGCTG 58.420 43.478 0.00 0.00 36.84 4.24
3689 6895 4.910458 TCAAAGAAGCCCTAAACTAGCT 57.090 40.909 0.00 0.00 38.88 3.32
3690 6896 5.648092 TGAATCAAAGAAGCCCTAAACTAGC 59.352 40.000 0.00 0.00 0.00 3.42
3691 6897 7.687941 TTGAATCAAAGAAGCCCTAAACTAG 57.312 36.000 0.00 0.00 0.00 2.57
3693 6899 6.976934 TTTGAATCAAAGAAGCCCTAAACT 57.023 33.333 4.03 0.00 0.00 2.66
3706 6912 7.838079 TCCTTTGAGAATCCTTTGAATCAAA 57.162 32.000 8.25 8.25 33.82 2.69
3707 6913 7.838079 TTCCTTTGAGAATCCTTTGAATCAA 57.162 32.000 0.00 0.00 0.00 2.57
3708 6914 8.426569 AATTCCTTTGAGAATCCTTTGAATCA 57.573 30.769 0.00 0.00 35.40 2.57
3709 6915 9.716531 AAAATTCCTTTGAGAATCCTTTGAATC 57.283 29.630 0.00 0.00 35.40 2.52
3710 6916 9.498176 CAAAATTCCTTTGAGAATCCTTTGAAT 57.502 29.630 5.90 0.00 46.35 2.57
3711 6917 7.933033 CCAAAATTCCTTTGAGAATCCTTTGAA 59.067 33.333 10.70 0.00 46.35 2.69
3712 6918 7.289782 TCCAAAATTCCTTTGAGAATCCTTTGA 59.710 33.333 10.70 0.00 46.35 2.69
3713 6919 7.444299 TCCAAAATTCCTTTGAGAATCCTTTG 58.556 34.615 0.00 0.00 46.35 2.77
3714 6920 7.256439 CCTCCAAAATTCCTTTGAGAATCCTTT 60.256 37.037 0.00 0.00 46.35 3.11
3715 6921 6.212187 CCTCCAAAATTCCTTTGAGAATCCTT 59.788 38.462 0.00 0.00 46.35 3.36
3716 6922 5.718607 CCTCCAAAATTCCTTTGAGAATCCT 59.281 40.000 0.00 0.00 46.35 3.24
3717 6923 5.716703 TCCTCCAAAATTCCTTTGAGAATCC 59.283 40.000 0.00 0.00 46.35 3.01
3718 6924 6.840780 TCCTCCAAAATTCCTTTGAGAATC 57.159 37.500 0.00 0.00 46.35 2.52
3719 6925 7.677319 AGAATCCTCCAAAATTCCTTTGAGAAT 59.323 33.333 0.00 0.00 46.35 2.40
3720 6926 7.012607 AGAATCCTCCAAAATTCCTTTGAGAA 58.987 34.615 0.00 0.00 46.35 2.87
3721 6927 6.555711 AGAATCCTCCAAAATTCCTTTGAGA 58.444 36.000 0.00 0.00 46.35 3.27
3722 6928 6.847421 AGAATCCTCCAAAATTCCTTTGAG 57.153 37.500 0.00 0.00 46.35 3.02
3723 6929 8.899887 ATTAGAATCCTCCAAAATTCCTTTGA 57.100 30.769 0.00 0.00 46.35 2.69
3755 6961 9.710900 ATCAAACAACCAAGATAGGAAAAATTC 57.289 29.630 0.00 0.00 0.00 2.17
3757 6963 9.710900 GAATCAAACAACCAAGATAGGAAAAAT 57.289 29.630 0.00 0.00 0.00 1.82
3758 6964 7.865385 CGAATCAAACAACCAAGATAGGAAAAA 59.135 33.333 0.00 0.00 0.00 1.94
3759 6965 7.013846 ACGAATCAAACAACCAAGATAGGAAAA 59.986 33.333 0.00 0.00 0.00 2.29
3760 6966 6.488683 ACGAATCAAACAACCAAGATAGGAAA 59.511 34.615 0.00 0.00 0.00 3.13
3761 6967 6.001460 ACGAATCAAACAACCAAGATAGGAA 58.999 36.000 0.00 0.00 0.00 3.36
3762 6968 5.556915 ACGAATCAAACAACCAAGATAGGA 58.443 37.500 0.00 0.00 0.00 2.94
3763 6969 5.880054 ACGAATCAAACAACCAAGATAGG 57.120 39.130 0.00 0.00 0.00 2.57
3764 6970 6.816640 TCCTACGAATCAAACAACCAAGATAG 59.183 38.462 0.00 0.00 0.00 2.08
3765 6971 6.703319 TCCTACGAATCAAACAACCAAGATA 58.297 36.000 0.00 0.00 0.00 1.98
3766 6972 5.556915 TCCTACGAATCAAACAACCAAGAT 58.443 37.500 0.00 0.00 0.00 2.40
3767 6973 4.963373 TCCTACGAATCAAACAACCAAGA 58.037 39.130 0.00 0.00 0.00 3.02
3768 6974 5.880054 ATCCTACGAATCAAACAACCAAG 57.120 39.130 0.00 0.00 0.00 3.61
3769 6975 5.533154 ACAATCCTACGAATCAAACAACCAA 59.467 36.000 0.00 0.00 0.00 3.67
3770 6976 5.067273 ACAATCCTACGAATCAAACAACCA 58.933 37.500 0.00 0.00 0.00 3.67
3771 6977 5.622770 ACAATCCTACGAATCAAACAACC 57.377 39.130 0.00 0.00 0.00 3.77
3772 6978 7.536281 GGTTTACAATCCTACGAATCAAACAAC 59.464 37.037 0.00 0.00 0.00 3.32
3773 6979 7.228906 TGGTTTACAATCCTACGAATCAAACAA 59.771 33.333 0.00 0.00 0.00 2.83
3774 6980 6.711194 TGGTTTACAATCCTACGAATCAAACA 59.289 34.615 0.00 0.00 0.00 2.83
3775 6981 7.136289 TGGTTTACAATCCTACGAATCAAAC 57.864 36.000 0.00 0.00 0.00 2.93
3776 6982 7.931578 ATGGTTTACAATCCTACGAATCAAA 57.068 32.000 0.00 0.00 0.00 2.69
3777 6983 7.713507 CCTATGGTTTACAATCCTACGAATCAA 59.286 37.037 0.00 0.00 0.00 2.57
3778 6984 7.070198 TCCTATGGTTTACAATCCTACGAATCA 59.930 37.037 0.00 0.00 0.00 2.57
3779 6985 7.439381 TCCTATGGTTTACAATCCTACGAATC 58.561 38.462 0.00 0.00 0.00 2.52
3780 6986 7.369551 TCCTATGGTTTACAATCCTACGAAT 57.630 36.000 0.00 0.00 0.00 3.34
3781 6987 6.795144 TCCTATGGTTTACAATCCTACGAA 57.205 37.500 0.00 0.00 0.00 3.85
3782 6988 6.795144 TTCCTATGGTTTACAATCCTACGA 57.205 37.500 0.00 0.00 0.00 3.43
3783 6989 8.446599 AAATTCCTATGGTTTACAATCCTACG 57.553 34.615 0.00 0.00 0.00 3.51
3786 6992 8.758829 GGAAAAATTCCTATGGTTTACAATCCT 58.241 33.333 1.86 0.00 46.57 3.24
3787 6993 8.942338 GGAAAAATTCCTATGGTTTACAATCC 57.058 34.615 1.86 0.00 46.57 3.01
3802 7008 7.762159 TGCAAATAAATCCTACGGAAAAATTCC 59.238 33.333 0.00 0.00 46.62 3.01
3803 7009 8.592155 GTGCAAATAAATCCTACGGAAAAATTC 58.408 33.333 0.00 0.00 34.34 2.17
3804 7010 8.311109 AGTGCAAATAAATCCTACGGAAAAATT 58.689 29.630 0.00 0.00 34.34 1.82
3805 7011 7.836842 AGTGCAAATAAATCCTACGGAAAAAT 58.163 30.769 0.00 0.00 34.34 1.82
3806 7012 7.222000 AGTGCAAATAAATCCTACGGAAAAA 57.778 32.000 0.00 0.00 34.34 1.94
3807 7013 6.827586 AGTGCAAATAAATCCTACGGAAAA 57.172 33.333 0.00 0.00 34.34 2.29
3808 7014 7.332557 TCTAGTGCAAATAAATCCTACGGAAA 58.667 34.615 0.00 0.00 34.34 3.13
3809 7015 6.880484 TCTAGTGCAAATAAATCCTACGGAA 58.120 36.000 0.00 0.00 34.34 4.30
3810 7016 6.474140 TCTAGTGCAAATAAATCCTACGGA 57.526 37.500 0.00 0.00 35.55 4.69
3811 7017 7.730364 AATCTAGTGCAAATAAATCCTACGG 57.270 36.000 0.00 0.00 0.00 4.02
3812 7018 8.826710 TGAAATCTAGTGCAAATAAATCCTACG 58.173 33.333 0.00 0.00 0.00 3.51
3821 7027 9.679661 TGTTTCCTATGAAATCTAGTGCAAATA 57.320 29.630 0.00 0.00 42.20 1.40
3822 7028 8.579850 TGTTTCCTATGAAATCTAGTGCAAAT 57.420 30.769 0.00 0.00 42.20 2.32
3823 7029 7.994425 TGTTTCCTATGAAATCTAGTGCAAA 57.006 32.000 0.00 0.00 42.20 3.68
3824 7030 8.579850 AATGTTTCCTATGAAATCTAGTGCAA 57.420 30.769 0.00 0.00 42.20 4.08
3825 7031 7.283127 GGAATGTTTCCTATGAAATCTAGTGCA 59.717 37.037 0.00 0.00 46.57 4.57
3826 7032 7.643579 GGAATGTTTCCTATGAAATCTAGTGC 58.356 38.462 0.00 0.00 46.57 4.40
3842 7048 4.524328 AGGTTTGAGTGGATGGAATGTTTC 59.476 41.667 0.00 0.00 0.00 2.78
3843 7049 4.482990 AGGTTTGAGTGGATGGAATGTTT 58.517 39.130 0.00 0.00 0.00 2.83
3844 7050 4.082125 GAGGTTTGAGTGGATGGAATGTT 58.918 43.478 0.00 0.00 0.00 2.71
3845 7051 3.331889 AGAGGTTTGAGTGGATGGAATGT 59.668 43.478 0.00 0.00 0.00 2.71
3846 7052 3.960571 AGAGGTTTGAGTGGATGGAATG 58.039 45.455 0.00 0.00 0.00 2.67
3847 7053 4.664688 AAGAGGTTTGAGTGGATGGAAT 57.335 40.909 0.00 0.00 0.00 3.01
3848 7054 4.453480 AAAGAGGTTTGAGTGGATGGAA 57.547 40.909 0.00 0.00 0.00 3.53
3849 7055 4.453480 AAAAGAGGTTTGAGTGGATGGA 57.547 40.909 0.00 0.00 0.00 3.41
3850 7056 6.490040 TCTTTAAAAGAGGTTTGAGTGGATGG 59.510 38.462 0.00 0.00 32.71 3.51
3851 7057 7.510549 TCTTTAAAAGAGGTTTGAGTGGATG 57.489 36.000 0.00 0.00 32.71 3.51
3852 7058 8.712228 ATTCTTTAAAAGAGGTTTGAGTGGAT 57.288 30.769 0.00 0.00 39.03 3.41
3853 7059 7.230712 GGATTCTTTAAAAGAGGTTTGAGTGGA 59.769 37.037 0.00 0.00 39.03 4.02
3854 7060 7.231519 AGGATTCTTTAAAAGAGGTTTGAGTGG 59.768 37.037 0.00 0.00 39.03 4.00
3855 7061 8.171164 AGGATTCTTTAAAAGAGGTTTGAGTG 57.829 34.615 0.00 0.00 39.03 3.51
3856 7062 9.862149 TTAGGATTCTTTAAAAGAGGTTTGAGT 57.138 29.630 0.00 0.00 39.03 3.41
3858 7064 9.862149 ACTTAGGATTCTTTAAAAGAGGTTTGA 57.138 29.630 0.00 0.00 39.03 2.69
3885 7091 6.636447 CGAGTGTTTGATTGTGCATAGAAAAA 59.364 34.615 0.00 0.00 0.00 1.94
3886 7092 6.142139 CGAGTGTTTGATTGTGCATAGAAAA 58.858 36.000 0.00 0.00 0.00 2.29
3887 7093 5.238432 ACGAGTGTTTGATTGTGCATAGAAA 59.762 36.000 0.00 0.00 0.00 2.52
3888 7094 4.754618 ACGAGTGTTTGATTGTGCATAGAA 59.245 37.500 0.00 0.00 0.00 2.10
3889 7095 4.314961 ACGAGTGTTTGATTGTGCATAGA 58.685 39.130 0.00 0.00 0.00 1.98
3890 7096 4.668576 ACGAGTGTTTGATTGTGCATAG 57.331 40.909 0.00 0.00 0.00 2.23
3891 7097 4.991687 TGTACGAGTGTTTGATTGTGCATA 59.008 37.500 0.00 0.00 0.00 3.14
3892 7098 3.812609 TGTACGAGTGTTTGATTGTGCAT 59.187 39.130 0.00 0.00 0.00 3.96
3893 7099 3.198872 TGTACGAGTGTTTGATTGTGCA 58.801 40.909 0.00 0.00 0.00 4.57
3894 7100 3.870723 TGTACGAGTGTTTGATTGTGC 57.129 42.857 0.00 0.00 0.00 4.57
3895 7101 5.179368 AGGATTGTACGAGTGTTTGATTGTG 59.821 40.000 0.00 0.00 0.00 3.33
3896 7102 5.179368 CAGGATTGTACGAGTGTTTGATTGT 59.821 40.000 0.00 0.00 0.00 2.71
3897 7103 5.179368 ACAGGATTGTACGAGTGTTTGATTG 59.821 40.000 0.00 0.00 35.25 2.67
3898 7104 5.305585 ACAGGATTGTACGAGTGTTTGATT 58.694 37.500 0.00 0.00 35.25 2.57
3899 7105 4.894784 ACAGGATTGTACGAGTGTTTGAT 58.105 39.130 0.00 0.00 35.25 2.57
3900 7106 4.330944 ACAGGATTGTACGAGTGTTTGA 57.669 40.909 0.00 0.00 35.25 2.69
3901 7107 4.625742 CCTACAGGATTGTACGAGTGTTTG 59.374 45.833 0.00 0.00 38.76 2.93
3902 7108 4.525487 TCCTACAGGATTGTACGAGTGTTT 59.475 41.667 0.00 0.00 39.78 2.83
3903 7109 4.084287 TCCTACAGGATTGTACGAGTGTT 58.916 43.478 0.00 0.00 39.78 3.32
3904 7110 3.693807 TCCTACAGGATTGTACGAGTGT 58.306 45.455 0.00 0.00 39.78 3.55
3917 7123 3.868757 TGTCGTCTTGAATCCTACAGG 57.131 47.619 0.00 0.00 0.00 4.00
3918 7124 4.806247 GGAATGTCGTCTTGAATCCTACAG 59.194 45.833 0.00 0.00 0.00 2.74
3919 7125 4.221924 TGGAATGTCGTCTTGAATCCTACA 59.778 41.667 0.00 0.00 30.94 2.74
3920 7126 4.567159 GTGGAATGTCGTCTTGAATCCTAC 59.433 45.833 0.00 0.00 30.94 3.18
3921 7127 4.466370 AGTGGAATGTCGTCTTGAATCCTA 59.534 41.667 0.00 0.00 30.94 2.94
3922 7128 3.261897 AGTGGAATGTCGTCTTGAATCCT 59.738 43.478 0.00 0.00 30.94 3.24
3923 7129 3.600388 AGTGGAATGTCGTCTTGAATCC 58.400 45.455 0.00 0.00 0.00 3.01
3924 7130 4.499183 AGAGTGGAATGTCGTCTTGAATC 58.501 43.478 0.00 0.00 0.00 2.52
3925 7131 4.543590 AGAGTGGAATGTCGTCTTGAAT 57.456 40.909 0.00 0.00 0.00 2.57
3926 7132 5.462530 TTAGAGTGGAATGTCGTCTTGAA 57.537 39.130 0.00 0.00 0.00 2.69
3927 7133 5.394224 GGATTAGAGTGGAATGTCGTCTTGA 60.394 44.000 0.00 0.00 0.00 3.02
3928 7134 4.806247 GGATTAGAGTGGAATGTCGTCTTG 59.194 45.833 0.00 0.00 0.00 3.02
3929 7135 4.141914 GGGATTAGAGTGGAATGTCGTCTT 60.142 45.833 0.00 0.00 0.00 3.01
3930 7136 3.385111 GGGATTAGAGTGGAATGTCGTCT 59.615 47.826 0.00 0.00 0.00 4.18
3931 7137 3.132289 TGGGATTAGAGTGGAATGTCGTC 59.868 47.826 0.00 0.00 0.00 4.20
3932 7138 3.104512 TGGGATTAGAGTGGAATGTCGT 58.895 45.455 0.00 0.00 0.00 4.34
3933 7139 3.819564 TGGGATTAGAGTGGAATGTCG 57.180 47.619 0.00 0.00 0.00 4.35
3934 7140 5.041191 ACATGGGATTAGAGTGGAATGTC 57.959 43.478 0.00 0.00 0.00 3.06
3935 7141 5.456921 AACATGGGATTAGAGTGGAATGT 57.543 39.130 0.00 0.00 0.00 2.71
3936 7142 6.780457 AAAACATGGGATTAGAGTGGAATG 57.220 37.500 0.00 0.00 0.00 2.67
3937 7143 6.381133 GGAAAAACATGGGATTAGAGTGGAAT 59.619 38.462 0.00 0.00 0.00 3.01
3938 7144 5.714806 GGAAAAACATGGGATTAGAGTGGAA 59.285 40.000 0.00 0.00 0.00 3.53
3939 7145 5.015178 AGGAAAAACATGGGATTAGAGTGGA 59.985 40.000 0.00 0.00 0.00 4.02
3940 7146 5.264395 AGGAAAAACATGGGATTAGAGTGG 58.736 41.667 0.00 0.00 0.00 4.00
3941 7147 8.525290 AATAGGAAAAACATGGGATTAGAGTG 57.475 34.615 0.00 0.00 0.00 3.51
3942 7148 7.780271 GGAATAGGAAAAACATGGGATTAGAGT 59.220 37.037 0.00 0.00 0.00 3.24
3943 7149 7.231519 GGGAATAGGAAAAACATGGGATTAGAG 59.768 40.741 0.00 0.00 0.00 2.43
3944 7150 7.066781 GGGAATAGGAAAAACATGGGATTAGA 58.933 38.462 0.00 0.00 0.00 2.10
3945 7151 6.016276 CGGGAATAGGAAAAACATGGGATTAG 60.016 42.308 0.00 0.00 0.00 1.73
3946 7152 5.830991 CGGGAATAGGAAAAACATGGGATTA 59.169 40.000 0.00 0.00 0.00 1.75
3947 7153 4.649218 CGGGAATAGGAAAAACATGGGATT 59.351 41.667 0.00 0.00 0.00 3.01
3948 7154 4.215109 CGGGAATAGGAAAAACATGGGAT 58.785 43.478 0.00 0.00 0.00 3.85
3949 7155 3.626930 CGGGAATAGGAAAAACATGGGA 58.373 45.455 0.00 0.00 0.00 4.37
3950 7156 2.100749 GCGGGAATAGGAAAAACATGGG 59.899 50.000 0.00 0.00 0.00 4.00
3951 7157 2.223479 CGCGGGAATAGGAAAAACATGG 60.223 50.000 0.00 0.00 0.00 3.66
3952 7158 2.422127 ACGCGGGAATAGGAAAAACATG 59.578 45.455 12.47 0.00 0.00 3.21
3953 7159 2.718563 ACGCGGGAATAGGAAAAACAT 58.281 42.857 12.47 0.00 0.00 2.71
3954 7160 2.188062 ACGCGGGAATAGGAAAAACA 57.812 45.000 12.47 0.00 0.00 2.83
3955 7161 3.564235 AAACGCGGGAATAGGAAAAAC 57.436 42.857 12.47 0.00 0.00 2.43
3956 7162 3.305471 CCAAAACGCGGGAATAGGAAAAA 60.305 43.478 12.47 0.00 0.00 1.94
3957 7163 2.229302 CCAAAACGCGGGAATAGGAAAA 59.771 45.455 12.47 0.00 0.00 2.29
3958 7164 1.813786 CCAAAACGCGGGAATAGGAAA 59.186 47.619 12.47 0.00 0.00 3.13
3959 7165 1.003349 TCCAAAACGCGGGAATAGGAA 59.997 47.619 12.47 0.00 0.00 3.36
3960 7166 0.614294 TCCAAAACGCGGGAATAGGA 59.386 50.000 12.47 7.14 0.00 2.94
3961 7167 1.455248 TTCCAAAACGCGGGAATAGG 58.545 50.000 12.47 4.53 38.23 2.57
3962 7168 3.488553 GGATTTCCAAAACGCGGGAATAG 60.489 47.826 12.47 0.00 42.44 1.73
3963 7169 2.424246 GGATTTCCAAAACGCGGGAATA 59.576 45.455 12.47 5.29 42.44 1.75
3964 7170 1.203758 GGATTTCCAAAACGCGGGAAT 59.796 47.619 12.47 0.00 42.44 3.01
3965 7171 0.599060 GGATTTCCAAAACGCGGGAA 59.401 50.000 12.47 11.04 41.27 3.97
3966 7172 0.250989 AGGATTTCCAAAACGCGGGA 60.251 50.000 12.47 3.98 38.89 5.14
3967 7173 1.131693 GTAGGATTTCCAAAACGCGGG 59.868 52.381 12.47 0.89 38.89 6.13
3968 7174 1.201987 CGTAGGATTTCCAAAACGCGG 60.202 52.381 12.47 0.00 38.89 6.46
3969 7175 1.727880 TCGTAGGATTTCCAAAACGCG 59.272 47.619 3.53 3.53 38.18 6.01
3970 7176 3.817148 TTCGTAGGATTTCCAAAACGC 57.183 42.857 11.86 0.00 38.18 4.84
3971 7177 5.539582 TGATTCGTAGGATTTCCAAAACG 57.460 39.130 10.92 10.92 39.01 3.60
3972 7178 7.590279 TCTTTGATTCGTAGGATTTCCAAAAC 58.410 34.615 0.00 0.00 38.89 2.43
3973 7179 7.094377 CCTCTTTGATTCGTAGGATTTCCAAAA 60.094 37.037 0.00 0.00 38.89 2.44
3974 7180 6.374333 CCTCTTTGATTCGTAGGATTTCCAAA 59.626 38.462 0.00 0.00 38.89 3.28
3975 7181 5.880332 CCTCTTTGATTCGTAGGATTTCCAA 59.120 40.000 0.00 0.00 38.89 3.53
3976 7182 5.428253 CCTCTTTGATTCGTAGGATTTCCA 58.572 41.667 0.00 0.00 38.89 3.53
3977 7183 4.273724 GCCTCTTTGATTCGTAGGATTTCC 59.726 45.833 0.00 0.00 0.00 3.13
3978 7184 4.273724 GGCCTCTTTGATTCGTAGGATTTC 59.726 45.833 0.00 0.00 0.00 2.17
3979 7185 4.200092 GGCCTCTTTGATTCGTAGGATTT 58.800 43.478 0.00 0.00 0.00 2.17
3980 7186 3.433740 GGGCCTCTTTGATTCGTAGGATT 60.434 47.826 0.84 0.00 0.00 3.01
3981 7187 2.104963 GGGCCTCTTTGATTCGTAGGAT 59.895 50.000 0.84 0.00 0.00 3.24
3982 7188 1.485066 GGGCCTCTTTGATTCGTAGGA 59.515 52.381 0.84 0.00 0.00 2.94
3983 7189 1.486726 AGGGCCTCTTTGATTCGTAGG 59.513 52.381 0.00 0.00 0.00 3.18
3984 7190 2.990066 AGGGCCTCTTTGATTCGTAG 57.010 50.000 0.00 0.00 0.00 3.51
3985 7191 4.028131 TCTAAGGGCCTCTTTGATTCGTA 58.972 43.478 6.46 0.00 36.93 3.43
3986 7192 2.838202 TCTAAGGGCCTCTTTGATTCGT 59.162 45.455 6.46 0.00 36.93 3.85
3987 7193 3.543680 TCTAAGGGCCTCTTTGATTCG 57.456 47.619 6.46 0.00 36.93 3.34
3988 7194 4.080299 TCCTTCTAAGGGCCTCTTTGATTC 60.080 45.833 6.46 0.00 46.47 2.52
3989 7195 3.852578 TCCTTCTAAGGGCCTCTTTGATT 59.147 43.478 6.46 0.00 46.47 2.57
3990 7196 3.464828 TCCTTCTAAGGGCCTCTTTGAT 58.535 45.455 6.46 0.00 46.47 2.57
3991 7197 2.915869 TCCTTCTAAGGGCCTCTTTGA 58.084 47.619 6.46 11.55 46.47 2.69
3992 7198 3.721087 TTCCTTCTAAGGGCCTCTTTG 57.279 47.619 6.46 9.67 46.47 2.77
3993 7199 4.354087 TCTTTTCCTTCTAAGGGCCTCTTT 59.646 41.667 6.46 0.00 46.47 2.52
3994 7200 3.916989 TCTTTTCCTTCTAAGGGCCTCTT 59.083 43.478 6.46 7.24 46.47 2.85
3995 7201 3.532102 TCTTTTCCTTCTAAGGGCCTCT 58.468 45.455 6.46 0.00 46.47 3.69
3996 7202 4.302559 TTCTTTTCCTTCTAAGGGCCTC 57.697 45.455 6.46 0.00 46.47 4.70
3997 7203 4.741928 TTTCTTTTCCTTCTAAGGGCCT 57.258 40.909 0.00 0.00 46.47 5.19
3998 7204 5.279506 CCTTTTTCTTTTCCTTCTAAGGGCC 60.280 44.000 8.87 0.00 46.47 5.80
3999 7205 5.279506 CCCTTTTTCTTTTCCTTCTAAGGGC 60.280 44.000 8.87 0.00 46.47 5.19
4000 7206 6.346477 CCCTTTTTCTTTTCCTTCTAAGGG 57.654 41.667 8.87 0.00 46.47 3.95
4002 7208 9.481340 CAAATCCCTTTTTCTTTTCCTTCTAAG 57.519 33.333 0.00 0.00 0.00 2.18
4003 7209 8.988060 ACAAATCCCTTTTTCTTTTCCTTCTAA 58.012 29.630 0.00 0.00 0.00 2.10
4004 7210 8.421002 CACAAATCCCTTTTTCTTTTCCTTCTA 58.579 33.333 0.00 0.00 0.00 2.10
4005 7211 7.092891 ACACAAATCCCTTTTTCTTTTCCTTCT 60.093 33.333 0.00 0.00 0.00 2.85
4006 7212 7.047891 ACACAAATCCCTTTTTCTTTTCCTTC 58.952 34.615 0.00 0.00 0.00 3.46
4007 7213 6.957631 ACACAAATCCCTTTTTCTTTTCCTT 58.042 32.000 0.00 0.00 0.00 3.36
4008 7214 6.560003 ACACAAATCCCTTTTTCTTTTCCT 57.440 33.333 0.00 0.00 0.00 3.36
4009 7215 6.704493 GGTACACAAATCCCTTTTTCTTTTCC 59.296 38.462 0.00 0.00 0.00 3.13
4010 7216 7.497595 AGGTACACAAATCCCTTTTTCTTTTC 58.502 34.615 0.00 0.00 0.00 2.29
4011 7217 7.432148 AGGTACACAAATCCCTTTTTCTTTT 57.568 32.000 0.00 0.00 0.00 2.27
4012 7218 7.432148 AAGGTACACAAATCCCTTTTTCTTT 57.568 32.000 0.00 0.00 33.55 2.52
4013 7219 7.125053 TCAAAGGTACACAAATCCCTTTTTCTT 59.875 33.333 0.00 0.00 43.06 2.52
4014 7220 6.609616 TCAAAGGTACACAAATCCCTTTTTCT 59.390 34.615 0.00 0.00 43.06 2.52
4015 7221 6.811954 TCAAAGGTACACAAATCCCTTTTTC 58.188 36.000 0.00 0.00 43.06 2.29
4016 7222 6.800072 TCAAAGGTACACAAATCCCTTTTT 57.200 33.333 0.00 0.00 43.06 1.94
4017 7223 6.994421 ATCAAAGGTACACAAATCCCTTTT 57.006 33.333 0.00 0.00 43.06 2.27
4018 7224 7.893302 TGATATCAAAGGTACACAAATCCCTTT 59.107 33.333 1.98 0.00 45.72 3.11
4019 7225 7.410174 TGATATCAAAGGTACACAAATCCCTT 58.590 34.615 1.98 0.00 38.94 3.95
4020 7226 6.969043 TGATATCAAAGGTACACAAATCCCT 58.031 36.000 1.98 0.00 0.00 4.20
4021 7227 7.823745 ATGATATCAAAGGTACACAAATCCC 57.176 36.000 9.99 0.00 0.00 3.85
4174 7593 0.184211 GGGTACAACCACCACCAACT 59.816 55.000 0.00 0.00 41.02 3.16
4216 7635 6.377146 TCTCAAGGGTTTGTTTAATAGCATCC 59.623 38.462 0.00 0.00 35.73 3.51
4266 7687 3.199946 TGCGAAAGAGGATCCCATTAACT 59.800 43.478 8.55 0.00 33.66 2.24
4302 7723 6.093633 ACGCCTTGAACTAAATACAGAATTCC 59.906 38.462 0.65 0.00 0.00 3.01
4602 8026 1.869767 GCAGCCATCAAATCCTCGTAG 59.130 52.381 0.00 0.00 0.00 3.51
4991 8428 1.588667 CACCACCTGTTTGCGCAAC 60.589 57.895 24.99 18.04 35.71 4.17
5036 8473 2.293399 GGTGATGAAAGTTTTCGCCACT 59.707 45.455 19.17 0.00 39.66 4.00
5391 8828 7.990314 TGTAGCTACAATATTCCATGCAACTAA 59.010 33.333 24.15 0.00 32.40 2.24
5392 8829 7.505258 TGTAGCTACAATATTCCATGCAACTA 58.495 34.615 24.15 0.00 32.40 2.24
5420 8857 5.168526 TCGAAAAGAACAACTGTGAATGG 57.831 39.130 0.00 0.00 0.00 3.16
5421 8858 4.672413 GCTCGAAAAGAACAACTGTGAATG 59.328 41.667 0.00 0.00 0.00 2.67
5436 8873 6.565234 TGTTTAAGGAACAAATGCTCGAAAA 58.435 32.000 0.00 0.00 44.95 2.29
5500 8937 3.898517 TCATGCGAAGAGTATACCGAG 57.101 47.619 0.00 0.00 0.00 4.63
5504 8945 6.508088 CGAAACCTTTCATGCGAAGAGTATAC 60.508 42.308 9.44 0.00 37.01 1.47
5507 8948 3.678072 CGAAACCTTTCATGCGAAGAGTA 59.322 43.478 9.44 0.00 37.01 2.59
5559 9005 3.251571 CCTACGCTCAGTTAAGGAACAC 58.748 50.000 0.00 0.00 38.10 3.32
5598 9044 6.987386 AGTCTACCGAATCCAGATATGAAAG 58.013 40.000 0.00 0.00 0.00 2.62
5630 9076 0.535102 CTGTGGCACGAAACCTTCCT 60.535 55.000 13.77 0.00 0.00 3.36
5642 9088 3.399105 AAGTCGCACCACTGTGGCA 62.399 57.895 26.20 5.54 42.67 4.92
5667 9113 3.262405 TGTTACCGCTTATGAGGAACCTT 59.738 43.478 5.37 0.00 36.60 3.50
5763 9209 5.959594 TGAAAATGATGGGAGACATTGGATT 59.040 36.000 0.00 0.00 40.72 3.01
5892 9338 0.438830 GAGTTTCACATCGACGCACC 59.561 55.000 0.00 0.00 0.00 5.01
5896 9342 2.469886 TCAAACGAGTTTCACATCGACG 59.530 45.455 1.13 0.00 41.40 5.12
5916 9407 7.657354 AGACCAAAAGGTTGCTTAAAATTCATC 59.343 33.333 0.00 0.00 33.01 2.92
5920 9411 9.674068 TTTTAGACCAAAAGGTTGCTTAAAATT 57.326 25.926 0.00 0.00 32.31 1.82
5948 9447 9.282569 GAAGCAGGATATCTCACTTTTATGATT 57.717 33.333 2.05 0.00 0.00 2.57
5949 9448 7.601886 CGAAGCAGGATATCTCACTTTTATGAT 59.398 37.037 2.05 0.00 0.00 2.45
5967 9466 2.907897 CTTAGCCCGACCGAAGCAGG 62.908 65.000 7.04 0.00 37.30 4.85
5979 9478 0.542333 GTCCTCAACCTCCTTAGCCC 59.458 60.000 0.00 0.00 0.00 5.19
6062 9561 6.779539 AGAGTTTCCACTTTCCAGAAATGAAT 59.220 34.615 0.00 0.00 32.54 2.57
6077 9576 6.594159 TCCATTTCTTATTCGAGAGTTTCCAC 59.406 38.462 0.00 0.00 0.00 4.02
6078 9577 6.707290 TCCATTTCTTATTCGAGAGTTTCCA 58.293 36.000 0.00 0.00 0.00 3.53
6079 9578 7.611213 TTCCATTTCTTATTCGAGAGTTTCC 57.389 36.000 0.00 0.00 0.00 3.13
6080 9579 9.548208 CTTTTCCATTTCTTATTCGAGAGTTTC 57.452 33.333 0.00 0.00 0.00 2.78
6081 9580 8.515414 CCTTTTCCATTTCTTATTCGAGAGTTT 58.485 33.333 0.00 0.00 0.00 2.66
6082 9581 7.883311 TCCTTTTCCATTTCTTATTCGAGAGTT 59.117 33.333 0.00 0.00 0.00 3.01
6083 9582 7.394816 TCCTTTTCCATTTCTTATTCGAGAGT 58.605 34.615 0.00 0.00 0.00 3.24
6084 9583 7.849804 TCCTTTTCCATTTCTTATTCGAGAG 57.150 36.000 0.00 0.00 0.00 3.20
6135 9635 4.201950 GGCAACTCACCATTACAGCTATTG 60.202 45.833 0.00 0.00 0.00 1.90
6137 9637 3.054434 TGGCAACTCACCATTACAGCTAT 60.054 43.478 0.00 0.00 37.61 2.97
6138 9638 2.304470 TGGCAACTCACCATTACAGCTA 59.696 45.455 0.00 0.00 37.61 3.32
6139 9639 1.073763 TGGCAACTCACCATTACAGCT 59.926 47.619 0.00 0.00 37.61 4.24
6140 9640 1.533625 TGGCAACTCACCATTACAGC 58.466 50.000 0.00 0.00 37.61 4.40
6141 9641 4.276678 CCATATGGCAACTCACCATTACAG 59.723 45.833 9.29 0.00 45.86 2.74
6142 9642 4.080072 TCCATATGGCAACTCACCATTACA 60.080 41.667 17.58 0.00 45.86 2.41
6144 9644 4.446167 CCTCCATATGGCAACTCACCATTA 60.446 45.833 17.58 0.00 45.86 1.90
6147 9647 1.212688 CCTCCATATGGCAACTCACCA 59.787 52.381 17.58 0.00 42.61 4.17
6157 9657 3.133003 AGAACAAGTCGTCCTCCATATGG 59.867 47.826 16.25 16.25 0.00 2.74
6187 9687 0.247736 GGTAGACTGGTGAGCACTGG 59.752 60.000 0.16 0.00 0.00 4.00
6264 9779 5.712004 TCGATATTTCTTACGTTCACCACA 58.288 37.500 0.00 0.00 0.00 4.17
6310 9828 1.142870 CACCCTGGTCCTTTGTTCTGA 59.857 52.381 0.00 0.00 0.00 3.27
6315 9833 1.747444 AGATCACCCTGGTCCTTTGT 58.253 50.000 0.00 0.00 0.00 2.83
6373 9891 9.421806 TCATTTATAAGCTTGAACAACCATTTG 57.578 29.630 9.86 0.00 38.83 2.32
6424 9956 8.298854 CACTTTCTGAATGTGGATATTTGTTGA 58.701 33.333 22.03 0.00 34.09 3.18
6437 9969 5.525378 GTCACTTGAGACACTTTCTGAATGT 59.475 40.000 3.34 3.34 38.40 2.71
6476 10008 3.756117 AGACCCTTTGAGAATGGTGAAC 58.244 45.455 0.00 0.00 34.40 3.18
6489 10021 8.445588 TCTTCCTTGACTTTTAATAGACCCTTT 58.554 33.333 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.