Multiple sequence alignment - TraesCS6D01G030100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G030100 chr6D 100.000 6367 0 0 1 6367 11768750 11775116 0.000000e+00 11758
1 TraesCS6D01G030100 chr6D 92.530 415 29 2 1770 2184 29754791 29755203 1.530000e-165 593
2 TraesCS6D01G030100 chr6D 87.500 152 11 5 868 1013 62082661 62082512 1.100000e-37 169
3 TraesCS6D01G030100 chr6D 87.838 148 12 3 872 1013 156018179 156018032 1.100000e-37 169
4 TraesCS6D01G030100 chr6D 84.615 156 22 1 529 682 360818822 360818667 3.070000e-33 154
5 TraesCS6D01G030100 chr6B 88.792 4265 272 98 2186 6354 21434519 21430365 0.000000e+00 5038
6 TraesCS6D01G030100 chr6B 85.902 1064 87 35 728 1770 21435533 21434512 0.000000e+00 1075
7 TraesCS6D01G030100 chr6B 90.909 132 8 1 359 490 21436514 21436387 2.360000e-39 174
8 TraesCS6D01G030100 chr6B 75.964 337 36 27 1185 1521 393072310 393072601 1.440000e-26 132
9 TraesCS6D01G030100 chr6B 75.731 342 37 28 1181 1521 375642085 375641789 5.180000e-26 130
10 TraesCS6D01G030100 chr6B 75.439 342 40 27 1181 1521 710547730 710547432 6.700000e-25 126
11 TraesCS6D01G030100 chr6A 93.131 1907 101 15 3528 5408 13065195 13067097 0.000000e+00 2769
12 TraesCS6D01G030100 chr6A 94.232 1283 60 8 2264 3532 13063880 13065162 0.000000e+00 1947
13 TraesCS6D01G030100 chr6A 88.605 939 55 31 5463 6364 13067103 13068026 0.000000e+00 1094
14 TraesCS6D01G030100 chr6A 85.996 1064 75 32 752 1771 13062841 13063874 0.000000e+00 1072
15 TraesCS6D01G030100 chr6A 94.762 420 18 3 1768 2186 465233591 465233175 0.000000e+00 651
16 TraesCS6D01G030100 chr6A 90.116 344 31 2 1 342 13061059 13061401 1.630000e-120 444
17 TraesCS6D01G030100 chr6A 89.600 125 8 2 360 484 13062077 13062196 3.070000e-33 154
18 TraesCS6D01G030100 chr6A 86.614 127 13 3 1027 1153 607962581 607962459 3.100000e-28 137
19 TraesCS6D01G030100 chr7D 85.000 1040 120 27 3541 4571 610695823 610696835 0.000000e+00 1024
20 TraesCS6D01G030100 chr7D 83.986 587 78 9 2650 3227 610694878 610695457 3.360000e-152 549
21 TraesCS6D01G030100 chr7D 83.815 346 51 4 2272 2613 610694441 610694785 2.210000e-84 324
22 TraesCS6D01G030100 chr7D 93.293 164 11 0 3271 3434 610695471 610695634 6.380000e-60 243
23 TraesCS6D01G030100 chr7D 87.919 149 18 0 529 677 192549611 192549759 6.560000e-40 176
24 TraesCS6D01G030100 chr7D 87.500 152 11 5 868 1013 32521493 32521344 1.100000e-37 169
25 TraesCS6D01G030100 chr7D 87.500 152 11 5 868 1013 625867226 625867375 1.100000e-37 169
26 TraesCS6D01G030100 chr7B 88.820 805 81 5 3541 4345 698119019 698118224 0.000000e+00 979
27 TraesCS6D01G030100 chr7B 88.696 805 82 5 3541 4345 698025182 698024387 0.000000e+00 974
28 TraesCS6D01G030100 chr7B 82.964 587 81 13 2650 3227 698026043 698025467 4.400000e-141 512
29 TraesCS6D01G030100 chr7B 82.964 587 81 13 2650 3227 698119880 698119304 4.400000e-141 512
30 TraesCS6D01G030100 chr7B 82.983 476 63 12 2650 3116 697932445 697931979 1.280000e-111 414
31 TraesCS6D01G030100 chr7B 82.967 364 53 7 2256 2613 697932899 697932539 2.860000e-83 320
32 TraesCS6D01G030100 chr7B 82.967 364 53 7 2256 2613 698026497 698026137 2.860000e-83 320
33 TraesCS6D01G030100 chr7B 82.967 364 53 7 2256 2613 698120334 698119974 2.860000e-83 320
34 TraesCS6D01G030100 chr7B 91.018 167 15 0 3271 3437 698025453 698025287 6.420000e-55 226
35 TraesCS6D01G030100 chr7B 91.018 167 15 0 3271 3437 698119290 698119124 6.420000e-55 226
36 TraesCS6D01G030100 chr7B 90.000 150 10 3 868 1013 747299704 747299556 8.430000e-44 189
37 TraesCS6D01G030100 chr7B 86.486 148 17 3 526 671 216679977 216680123 6.610000e-35 159
38 TraesCS6D01G030100 chr7B 76.261 337 36 23 1185 1521 411605918 411606210 8.610000e-29 139
39 TraesCS6D01G030100 chrUn 88.710 806 80 7 3541 4345 170392144 170391349 0.000000e+00 974
40 TraesCS6D01G030100 chrUn 88.745 773 79 4 3570 4342 397053771 397054535 0.000000e+00 939
41 TraesCS6D01G030100 chrUn 82.983 476 63 12 2650 3116 170393157 170392691 1.280000e-111 414
42 TraesCS6D01G030100 chrUn 82.983 476 63 12 2650 3116 352716921 352717387 1.280000e-111 414
43 TraesCS6D01G030100 chrUn 82.983 476 63 12 2650 3116 373215929 373215463 1.280000e-111 414
44 TraesCS6D01G030100 chrUn 82.967 364 53 7 2256 2613 170393611 170393251 2.860000e-83 320
45 TraesCS6D01G030100 chrUn 82.834 367 54 7 2253 2613 352716464 352716827 2.860000e-83 320
46 TraesCS6D01G030100 chrUn 82.967 364 53 7 2256 2613 373216383 373216023 2.860000e-83 320
47 TraesCS6D01G030100 chrUn 91.018 167 15 0 3271 3437 170392415 170392249 6.420000e-55 226
48 TraesCS6D01G030100 chrUn 81.429 280 24 13 852 1127 12511730 12511475 3.010000e-48 204
49 TraesCS6D01G030100 chr5A 95.652 414 13 5 1771 2184 560612531 560612123 0.000000e+00 660
50 TraesCS6D01G030100 chr5A 95.411 414 12 4 1771 2184 293507526 293507932 0.000000e+00 652
51 TraesCS6D01G030100 chr5A 90.974 421 30 7 1771 2188 535244425 535244010 1.550000e-155 560
52 TraesCS6D01G030100 chr7A 95.204 417 13 5 1770 2184 90456468 90456879 0.000000e+00 652
53 TraesCS6D01G030100 chr7A 82.712 295 25 10 852 1143 49454041 49453770 8.250000e-59 239
54 TraesCS6D01G030100 chr4A 94.712 416 16 4 1769 2184 620981163 620980754 5.380000e-180 641
55 TraesCS6D01G030100 chr4A 95.467 375 13 3 1810 2184 594001560 594001930 4.250000e-166 595
56 TraesCS6D01G030100 chr2D 90.865 416 36 2 1769 2184 359387134 359387547 2.010000e-154 556
57 TraesCS6D01G030100 chr2D 87.838 148 18 0 527 674 434201584 434201731 2.360000e-39 174
58 TraesCS6D01G030100 chr2A 83.051 295 24 10 852 1143 606770076 606770347 1.770000e-60 244
59 TraesCS6D01G030100 chr2A 87.013 154 15 5 526 677 652340079 652340229 1.100000e-37 169
60 TraesCS6D01G030100 chr2A 87.838 148 6 10 874 1013 90615541 90615398 5.110000e-36 163
61 TraesCS6D01G030100 chr1B 86.139 202 20 3 945 1143 377073048 377072852 1.800000e-50 211
62 TraesCS6D01G030100 chr1B 88.667 150 16 1 529 677 504521515 504521366 1.410000e-41 182
63 TraesCS6D01G030100 chr1B 86.755 151 19 1 528 677 28297324 28297474 3.950000e-37 167
64 TraesCS6D01G030100 chr1B 76.023 342 36 26 1181 1521 586559175 586559471 1.110000e-27 135
65 TraesCS6D01G030100 chr5B 80.205 293 24 19 852 1144 468880851 468881109 8.430000e-44 189
66 TraesCS6D01G030100 chr5B 86.275 153 16 4 526 677 585262674 585262822 1.840000e-35 161
67 TraesCS6D01G030100 chr5B 75.439 342 39 27 1181 1521 446179172 446178875 2.410000e-24 124
68 TraesCS6D01G030100 chr1A 87.500 152 13 3 868 1013 379472794 379472945 3.050000e-38 171
69 TraesCS6D01G030100 chr1A 85.333 150 21 1 529 677 104919006 104918857 3.070000e-33 154
70 TraesCS6D01G030100 chr5D 78.082 292 30 18 852 1143 439085143 439084886 3.070000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G030100 chr6D 11768750 11775116 6366 False 11758.000000 11758 100.000000 1 6367 1 chr6D.!!$F1 6366
1 TraesCS6D01G030100 chr6B 21430365 21436514 6149 True 2095.666667 5038 88.534333 359 6354 3 chr6B.!!$R3 5995
2 TraesCS6D01G030100 chr6A 13061059 13068026 6967 False 1246.666667 2769 90.280000 1 6364 6 chr6A.!!$F1 6363
3 TraesCS6D01G030100 chr7D 610694441 610696835 2394 False 535.000000 1024 86.523500 2272 4571 4 chr7D.!!$F3 2299
4 TraesCS6D01G030100 chr7B 698118224 698120334 2110 True 509.250000 979 86.442250 2256 4345 4 chr7B.!!$R4 2089
5 TraesCS6D01G030100 chr7B 698024387 698026497 2110 True 508.000000 974 86.411250 2256 4345 4 chr7B.!!$R3 2089
6 TraesCS6D01G030100 chr7B 697931979 697932899 920 True 367.000000 414 82.975000 2256 3116 2 chr7B.!!$R2 860
7 TraesCS6D01G030100 chrUn 397053771 397054535 764 False 939.000000 939 88.745000 3570 4342 1 chrUn.!!$F1 772
8 TraesCS6D01G030100 chrUn 170391349 170393611 2262 True 483.500000 974 86.419500 2256 4345 4 chrUn.!!$R2 2089
9 TraesCS6D01G030100 chrUn 352716464 352717387 923 False 367.000000 414 82.908500 2253 3116 2 chrUn.!!$F2 863
10 TraesCS6D01G030100 chrUn 373215463 373216383 920 True 367.000000 414 82.975000 2256 3116 2 chrUn.!!$R3 860

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
647 2142 0.248843 GACTAGCAGCAACCTCAGCT 59.751 55.0 0.00 0.0 44.62 4.24 F
1774 3356 0.107508 ATGCAACATCCTGACGGAGG 60.108 55.0 0.00 0.0 46.35 4.30 F
2077 3659 0.393077 AGTGCGCAGGTAAGTCAAGT 59.607 50.0 12.22 0.0 0.00 3.16 F
2338 3921 0.441533 GCGACTTCGTAGACTCGTCA 59.558 55.0 0.00 0.0 38.70 4.35 F
3106 4764 0.469917 ACCTACCATGCCGGAGATTG 59.530 55.0 5.05 0.0 38.63 2.67 F
4082 5974 0.389166 CGGGCAGTGAGAAGTCTGTC 60.389 60.0 0.00 0.0 35.81 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 3820 0.104304 AGACGTGGCTGTCGTTTTCT 59.896 50.000 0.00 0.0 43.70 2.52 R
3359 5169 0.253327 ATTCTTTCCGCTCCTCCCAC 59.747 55.000 0.00 0.0 0.00 4.61 R
4038 5930 1.243902 TCATTTCCGTTTCCACTGCC 58.756 50.000 0.00 0.0 0.00 4.85 R
4082 5974 2.711542 GGGCCATACATAGGATTTCCG 58.288 52.381 4.39 0.0 42.08 4.30 R
4702 6630 0.603975 ACCGTGCAGAGAAAAGGAGC 60.604 55.000 0.00 0.0 0.00 4.70 R
5389 7343 0.110056 CAACCACACTGCTGATTCGC 60.110 55.000 0.00 0.0 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.736696 GCCTGCAACATACATTGTGCC 60.737 52.381 0.00 0.00 38.99 5.01
23 24 1.467883 CCTGCAACATACATTGTGCCG 60.468 52.381 0.00 0.00 38.99 5.69
25 26 1.068679 TGCAACATACATTGTGCCGTG 60.069 47.619 0.00 0.00 38.99 4.94
30 31 2.881513 ACATACATTGTGCCGTGTGAAA 59.118 40.909 0.00 0.00 37.11 2.69
34 35 8.394893 ACATACATTGTGCCGTGTGAAACAAT 62.395 38.462 0.00 0.00 43.56 2.71
95 96 2.706190 GTGCCCTCCTATAACACTCCAT 59.294 50.000 0.00 0.00 0.00 3.41
97 98 3.391296 TGCCCTCCTATAACACTCCATTC 59.609 47.826 0.00 0.00 0.00 2.67
112 113 6.703607 ACACTCCATTCGAAGATACATTCATC 59.296 38.462 3.35 0.00 35.04 2.92
122 123 7.824289 TCGAAGATACATTCATCCAGAAAGTTT 59.176 33.333 0.00 0.00 38.87 2.66
142 143 2.507407 TTTAGGAGCGGCCAATCTTT 57.493 45.000 2.24 0.00 40.02 2.52
143 144 2.507407 TTAGGAGCGGCCAATCTTTT 57.493 45.000 2.24 0.00 40.02 2.27
147 148 1.993369 GAGCGGCCAATCTTTTCCCG 61.993 60.000 2.24 0.00 41.72 5.14
196 197 0.591170 TTGCAGCTTTGCGGTCTTAC 59.409 50.000 0.00 0.00 37.69 2.34
199 200 1.453155 CAGCTTTGCGGTCTTACCAT 58.547 50.000 0.00 0.00 38.47 3.55
206 207 1.138266 TGCGGTCTTACCATTAGGAGC 59.862 52.381 0.00 0.00 38.47 4.70
211 212 2.504175 GTCTTACCATTAGGAGCACCCA 59.496 50.000 0.00 0.00 38.69 4.51
221 222 1.198759 GGAGCACCCACTGGTTCCTA 61.199 60.000 0.00 0.00 44.75 2.94
223 224 1.375523 GCACCCACTGGTTCCTACG 60.376 63.158 0.00 0.00 44.75 3.51
229 230 1.265905 CCACTGGTTCCTACGCAAAAC 59.734 52.381 0.00 0.00 0.00 2.43
234 235 1.265905 GGTTCCTACGCAAAACAGGTG 59.734 52.381 0.00 0.00 0.00 4.00
239 240 2.356382 CCTACGCAAAACAGGTGAAACA 59.644 45.455 0.00 0.00 39.98 2.83
261 262 5.462398 ACATACCGCGAATATGAGAAACTTC 59.538 40.000 26.96 0.00 34.65 3.01
283 284 6.677781 TCAGAAGTTTTGAGACGTGAAAAT 57.322 33.333 0.00 0.00 0.00 1.82
330 333 2.950433 CGTAAGCCAAAGAGGACGTAA 58.050 47.619 0.00 0.00 41.22 3.18
345 348 1.167851 CGTAAGTGGGTCGGTACTCA 58.832 55.000 0.00 0.00 32.09 3.41
347 350 2.165030 CGTAAGTGGGTCGGTACTCATT 59.835 50.000 0.00 0.00 38.69 2.57
348 351 3.367703 CGTAAGTGGGTCGGTACTCATTT 60.368 47.826 0.00 0.00 38.69 2.32
349 352 2.762535 AGTGGGTCGGTACTCATTTG 57.237 50.000 0.00 0.00 38.69 2.32
353 356 1.406477 GGGTCGGTACTCATTTGGGAC 60.406 57.143 0.00 0.00 0.00 4.46
355 358 1.067354 GTCGGTACTCATTTGGGACGT 60.067 52.381 0.00 0.00 0.00 4.34
357 360 2.164219 TCGGTACTCATTTGGGACGTAC 59.836 50.000 0.00 0.00 0.00 3.67
370 1031 1.802365 GGACGTACGTGCCAGAAATTT 59.198 47.619 28.16 0.00 0.00 1.82
378 1039 2.719046 CGTGCCAGAAATTTGACGAAAC 59.281 45.455 0.00 0.00 0.00 2.78
380 1041 2.614520 TGCCAGAAATTTGACGAAACGA 59.385 40.909 0.00 0.00 0.00 3.85
408 1069 7.432252 AGTGAATCAACATTTCTTCAAAACGTC 59.568 33.333 0.00 0.00 30.06 4.34
426 1087 1.987770 GTCGGCACTCATTTGCATTTG 59.012 47.619 0.00 0.00 44.94 2.32
427 1088 1.885233 TCGGCACTCATTTGCATTTGA 59.115 42.857 0.00 0.00 44.94 2.69
428 1089 2.095110 TCGGCACTCATTTGCATTTGAG 60.095 45.455 19.50 19.50 44.94 3.02
429 1090 2.613691 GGCACTCATTTGCATTTGAGG 58.386 47.619 22.99 15.61 44.94 3.86
448 1109 4.219033 GAGGCATGTAAAAGACAACAACG 58.781 43.478 0.00 0.00 42.78 4.10
487 1148 1.274798 GCGCGTGTTCAACCAATTGG 61.275 55.000 23.31 23.31 42.17 3.16
490 1151 2.160615 CGCGTGTTCAACCAATTGGATA 59.839 45.455 31.22 12.35 38.94 2.59
491 1152 3.498082 GCGTGTTCAACCAATTGGATAC 58.502 45.455 31.22 20.01 38.94 2.24
492 1153 3.672241 GCGTGTTCAACCAATTGGATACC 60.672 47.826 31.22 13.90 32.99 2.73
551 2046 4.687901 AAAAATGAGACCAACCAAAGGG 57.312 40.909 0.00 0.00 41.29 3.95
552 2047 1.632589 AATGAGACCAACCAAAGGGC 58.367 50.000 0.00 0.00 37.90 5.19
556 2051 2.287977 AGACCAACCAAAGGGCTAAC 57.712 50.000 0.00 0.00 44.68 2.34
557 2052 1.203013 AGACCAACCAAAGGGCTAACC 60.203 52.381 0.00 0.00 44.68 2.85
568 2063 3.520623 GGCTAACCCTCATTGGCAT 57.479 52.632 0.00 0.00 37.77 4.40
569 2064 1.780503 GGCTAACCCTCATTGGCATT 58.219 50.000 0.00 0.00 37.77 3.56
570 2065 2.110578 GGCTAACCCTCATTGGCATTT 58.889 47.619 0.00 0.00 37.77 2.32
571 2066 2.501316 GGCTAACCCTCATTGGCATTTT 59.499 45.455 0.00 0.00 37.77 1.82
572 2067 3.055167 GGCTAACCCTCATTGGCATTTTT 60.055 43.478 0.00 0.00 37.77 1.94
595 2090 8.865590 TTTTATAAGAAAAACTCCACAAGCAC 57.134 30.769 0.00 0.00 0.00 4.40
596 2091 3.801114 AAGAAAAACTCCACAAGCACC 57.199 42.857 0.00 0.00 0.00 5.01
597 2092 2.733956 AGAAAAACTCCACAAGCACCA 58.266 42.857 0.00 0.00 0.00 4.17
598 2093 2.427095 AGAAAAACTCCACAAGCACCAC 59.573 45.455 0.00 0.00 0.00 4.16
599 2094 0.738389 AAAACTCCACAAGCACCACG 59.262 50.000 0.00 0.00 0.00 4.94
600 2095 1.724582 AAACTCCACAAGCACCACGC 61.725 55.000 0.00 0.00 42.91 5.34
611 2106 4.988598 ACCACGCGTCCAAGCCAG 62.989 66.667 9.86 0.00 0.00 4.85
612 2107 4.680237 CCACGCGTCCAAGCCAGA 62.680 66.667 9.86 0.00 0.00 3.86
613 2108 2.664851 CACGCGTCCAAGCCAGAA 60.665 61.111 9.86 0.00 0.00 3.02
614 2109 2.034879 CACGCGTCCAAGCCAGAAT 61.035 57.895 9.86 0.00 0.00 2.40
615 2110 1.302511 ACGCGTCCAAGCCAGAATT 60.303 52.632 5.58 0.00 0.00 2.17
616 2111 0.889186 ACGCGTCCAAGCCAGAATTT 60.889 50.000 5.58 0.00 0.00 1.82
617 2112 1.083489 CGCGTCCAAGCCAGAATTTA 58.917 50.000 0.00 0.00 0.00 1.40
618 2113 1.466950 CGCGTCCAAGCCAGAATTTAA 59.533 47.619 0.00 0.00 0.00 1.52
619 2114 2.095466 CGCGTCCAAGCCAGAATTTAAA 60.095 45.455 0.00 0.00 0.00 1.52
620 2115 3.242518 GCGTCCAAGCCAGAATTTAAAC 58.757 45.455 0.00 0.00 0.00 2.01
621 2116 3.057526 GCGTCCAAGCCAGAATTTAAACT 60.058 43.478 0.00 0.00 0.00 2.66
622 2117 4.723248 CGTCCAAGCCAGAATTTAAACTC 58.277 43.478 0.00 0.00 0.00 3.01
623 2118 4.215399 CGTCCAAGCCAGAATTTAAACTCA 59.785 41.667 0.00 0.00 0.00 3.41
624 2119 5.617751 CGTCCAAGCCAGAATTTAAACTCAG 60.618 44.000 0.00 0.00 0.00 3.35
625 2120 4.766891 TCCAAGCCAGAATTTAAACTCAGG 59.233 41.667 3.90 3.90 0.00 3.86
626 2121 4.524328 CCAAGCCAGAATTTAAACTCAGGT 59.476 41.667 9.46 0.00 0.00 4.00
627 2122 5.464168 CAAGCCAGAATTTAAACTCAGGTG 58.536 41.667 9.46 0.00 0.00 4.00
628 2123 4.082125 AGCCAGAATTTAAACTCAGGTGG 58.918 43.478 9.46 4.85 0.00 4.61
629 2124 4.079253 GCCAGAATTTAAACTCAGGTGGA 58.921 43.478 9.46 0.00 0.00 4.02
630 2125 4.082733 GCCAGAATTTAAACTCAGGTGGAC 60.083 45.833 9.46 0.00 0.00 4.02
631 2126 5.316987 CCAGAATTTAAACTCAGGTGGACT 58.683 41.667 0.00 0.00 0.00 3.85
632 2127 6.472887 CCAGAATTTAAACTCAGGTGGACTA 58.527 40.000 0.00 0.00 0.00 2.59
633 2128 6.595716 CCAGAATTTAAACTCAGGTGGACTAG 59.404 42.308 0.00 0.00 0.00 2.57
634 2129 6.092807 CAGAATTTAAACTCAGGTGGACTAGC 59.907 42.308 0.00 0.00 0.00 3.42
635 2130 4.967084 TTTAAACTCAGGTGGACTAGCA 57.033 40.909 0.00 0.00 0.00 3.49
636 2131 4.537135 TTAAACTCAGGTGGACTAGCAG 57.463 45.455 0.00 0.00 0.00 4.24
637 2132 0.610687 AACTCAGGTGGACTAGCAGC 59.389 55.000 0.00 0.00 0.00 5.25
638 2133 0.542938 ACTCAGGTGGACTAGCAGCA 60.543 55.000 0.00 0.00 0.00 4.41
639 2134 0.610174 CTCAGGTGGACTAGCAGCAA 59.390 55.000 0.00 0.00 0.00 3.91
640 2135 0.321671 TCAGGTGGACTAGCAGCAAC 59.678 55.000 0.00 0.00 0.00 4.17
641 2136 0.674895 CAGGTGGACTAGCAGCAACC 60.675 60.000 0.00 0.34 0.00 3.77
642 2137 0.838122 AGGTGGACTAGCAGCAACCT 60.838 55.000 0.00 1.96 33.19 3.50
643 2138 0.391793 GGTGGACTAGCAGCAACCTC 60.392 60.000 0.00 0.00 0.00 3.85
644 2139 0.321671 GTGGACTAGCAGCAACCTCA 59.678 55.000 0.00 0.00 0.00 3.86
645 2140 0.610174 TGGACTAGCAGCAACCTCAG 59.390 55.000 0.00 0.00 0.00 3.35
646 2141 0.742635 GGACTAGCAGCAACCTCAGC 60.743 60.000 0.00 0.00 0.00 4.26
647 2142 0.248843 GACTAGCAGCAACCTCAGCT 59.751 55.000 0.00 0.00 44.62 4.24
652 2147 3.573229 AGCAACCTCAGCTGCCCA 61.573 61.111 9.47 0.00 41.61 5.36
653 2148 3.060615 GCAACCTCAGCTGCCCAG 61.061 66.667 9.47 0.70 32.18 4.45
663 2158 2.674380 CTGCCCAGCCAACAGGTC 60.674 66.667 0.00 0.00 0.00 3.85
664 2159 4.641645 TGCCCAGCCAACAGGTCG 62.642 66.667 0.00 0.00 0.00 4.79
665 2160 4.329545 GCCCAGCCAACAGGTCGA 62.330 66.667 0.00 0.00 0.00 4.20
666 2161 2.671070 CCCAGCCAACAGGTCGAT 59.329 61.111 0.00 0.00 0.00 3.59
667 2162 1.746615 CCCAGCCAACAGGTCGATG 60.747 63.158 0.00 0.00 0.00 3.84
668 2163 2.401766 CCAGCCAACAGGTCGATGC 61.402 63.158 0.00 0.00 0.00 3.91
669 2164 2.045926 AGCCAACAGGTCGATGCC 60.046 61.111 0.00 0.00 0.00 4.40
670 2165 3.134127 GCCAACAGGTCGATGCCC 61.134 66.667 0.00 0.00 0.00 5.36
671 2166 2.438434 CCAACAGGTCGATGCCCC 60.438 66.667 0.00 0.00 0.00 5.80
672 2167 2.819595 CAACAGGTCGATGCCCCG 60.820 66.667 0.00 0.00 0.00 5.73
673 2168 3.319198 AACAGGTCGATGCCCCGT 61.319 61.111 0.00 0.00 0.00 5.28
674 2169 3.310860 AACAGGTCGATGCCCCGTC 62.311 63.158 0.00 0.00 0.00 4.79
675 2170 4.530857 CAGGTCGATGCCCCGTCC 62.531 72.222 0.00 3.65 37.87 4.79
676 2171 4.779733 AGGTCGATGCCCCGTCCT 62.780 66.667 7.57 7.57 41.79 3.85
677 2172 4.530857 GGTCGATGCCCCGTCCTG 62.531 72.222 0.00 0.00 35.44 3.86
678 2173 3.458163 GTCGATGCCCCGTCCTGA 61.458 66.667 0.00 0.00 0.00 3.86
679 2174 2.682136 TCGATGCCCCGTCCTGAA 60.682 61.111 0.00 0.00 0.00 3.02
680 2175 2.202932 CGATGCCCCGTCCTGAAG 60.203 66.667 0.00 0.00 0.00 3.02
681 2176 2.721167 CGATGCCCCGTCCTGAAGA 61.721 63.158 0.00 0.00 0.00 2.87
682 2177 1.832912 GATGCCCCGTCCTGAAGAT 59.167 57.895 0.00 0.00 0.00 2.40
683 2178 1.048601 GATGCCCCGTCCTGAAGATA 58.951 55.000 0.00 0.00 0.00 1.98
684 2179 1.625818 GATGCCCCGTCCTGAAGATAT 59.374 52.381 0.00 0.00 0.00 1.63
685 2180 2.391926 TGCCCCGTCCTGAAGATATA 57.608 50.000 0.00 0.00 0.00 0.86
686 2181 2.248248 TGCCCCGTCCTGAAGATATAG 58.752 52.381 0.00 0.00 0.00 1.31
687 2182 2.158370 TGCCCCGTCCTGAAGATATAGA 60.158 50.000 0.00 0.00 0.00 1.98
688 2183 2.897969 GCCCCGTCCTGAAGATATAGAA 59.102 50.000 0.00 0.00 0.00 2.10
689 2184 3.515901 GCCCCGTCCTGAAGATATAGAAT 59.484 47.826 0.00 0.00 0.00 2.40
690 2185 4.710375 GCCCCGTCCTGAAGATATAGAATA 59.290 45.833 0.00 0.00 0.00 1.75
691 2186 5.187186 GCCCCGTCCTGAAGATATAGAATAA 59.813 44.000 0.00 0.00 0.00 1.40
692 2187 6.127026 GCCCCGTCCTGAAGATATAGAATAAT 60.127 42.308 0.00 0.00 0.00 1.28
693 2188 7.069578 GCCCCGTCCTGAAGATATAGAATAATA 59.930 40.741 0.00 0.00 0.00 0.98
694 2189 8.414778 CCCCGTCCTGAAGATATAGAATAATAC 58.585 40.741 0.00 0.00 0.00 1.89
695 2190 9.191479 CCCGTCCTGAAGATATAGAATAATACT 57.809 37.037 0.00 0.00 0.00 2.12
711 2206 8.871125 AGAATAATACTAACACATAGGACCAGG 58.129 37.037 0.00 0.00 35.81 4.45
712 2207 8.562949 AATAATACTAACACATAGGACCAGGT 57.437 34.615 0.00 0.00 35.81 4.00
713 2208 6.481434 AATACTAACACATAGGACCAGGTC 57.519 41.667 11.70 11.70 35.81 3.85
714 2209 2.758979 ACTAACACATAGGACCAGGTCG 59.241 50.000 13.80 2.04 35.81 4.79
715 2210 0.902531 AACACATAGGACCAGGTCGG 59.097 55.000 13.80 5.66 42.50 4.79
716 2211 0.976073 ACACATAGGACCAGGTCGGG 60.976 60.000 13.80 3.17 40.22 5.14
717 2212 0.686441 CACATAGGACCAGGTCGGGA 60.686 60.000 13.80 1.31 40.22 5.14
718 2213 0.397254 ACATAGGACCAGGTCGGGAG 60.397 60.000 13.80 6.37 40.22 4.30
719 2214 0.397254 CATAGGACCAGGTCGGGAGT 60.397 60.000 13.80 0.00 40.22 3.85
720 2215 1.133575 CATAGGACCAGGTCGGGAGTA 60.134 57.143 13.80 0.67 40.22 2.59
721 2216 1.002069 TAGGACCAGGTCGGGAGTAA 58.998 55.000 13.80 0.00 40.22 2.24
722 2217 0.324460 AGGACCAGGTCGGGAGTAAG 60.324 60.000 13.80 0.00 40.22 2.34
723 2218 0.614134 GGACCAGGTCGGGAGTAAGT 60.614 60.000 13.80 0.00 40.22 2.24
724 2219 1.341383 GGACCAGGTCGGGAGTAAGTA 60.341 57.143 13.80 0.00 40.22 2.24
725 2220 2.450476 GACCAGGTCGGGAGTAAGTAA 58.550 52.381 3.05 0.00 40.22 2.24
726 2221 2.827921 GACCAGGTCGGGAGTAAGTAAA 59.172 50.000 3.05 0.00 40.22 2.01
734 2229 3.441572 TCGGGAGTAAGTAAACGAAGGAG 59.558 47.826 0.00 0.00 0.00 3.69
741 2236 1.082679 GTAAACGAAGGAGGCCGAGC 61.083 60.000 0.00 0.00 0.00 5.03
742 2237 2.552585 TAAACGAAGGAGGCCGAGCG 62.553 60.000 0.00 0.58 0.00 5.03
932 2455 1.080839 GCCGCTCTCTCGATCCATC 60.081 63.158 0.00 0.00 0.00 3.51
941 2464 1.825281 CTCGATCCATCCAGAGGGGC 61.825 65.000 0.00 0.00 36.21 5.80
942 2465 1.840650 CGATCCATCCAGAGGGGCT 60.841 63.158 0.00 0.00 36.21 5.19
943 2466 1.759881 GATCCATCCAGAGGGGCTG 59.240 63.158 0.00 0.00 44.49 4.85
944 2467 1.005289 ATCCATCCAGAGGGGCTGT 59.995 57.895 0.00 0.00 43.33 4.40
945 2468 1.059006 ATCCATCCAGAGGGGCTGTC 61.059 60.000 0.00 0.00 43.33 3.51
946 2469 2.750657 CCATCCAGAGGGGCTGTCC 61.751 68.421 0.00 0.00 43.33 4.02
994 2517 2.347731 GTAGAAAAGAAGTCCGGGCAG 58.652 52.381 9.71 0.00 0.00 4.85
1143 2673 2.978010 CGCCACGCCTTCAAGGTT 60.978 61.111 5.03 0.00 37.80 3.50
1146 2676 2.556287 CACGCCTTCAAGGTTCGC 59.444 61.111 5.03 0.00 37.80 4.70
1177 2729 5.380043 TCTTTCTGCCTCATCTCACTTTTT 58.620 37.500 0.00 0.00 0.00 1.94
1212 2764 4.108570 TCTGAGCTTAATCCCCCAACTAA 58.891 43.478 0.00 0.00 0.00 2.24
1224 2776 3.370104 CCCCAACTAATAATGGTGCCAA 58.630 45.455 0.00 0.00 34.79 4.52
1229 2781 6.323739 CCCAACTAATAATGGTGCCAAATACT 59.676 38.462 0.00 0.00 34.79 2.12
1231 2783 8.349983 CCAACTAATAATGGTGCCAAATACTAC 58.650 37.037 0.00 0.00 31.84 2.73
1232 2784 8.349983 CAACTAATAATGGTGCCAAATACTACC 58.650 37.037 0.00 0.00 0.00 3.18
1233 2785 7.579105 ACTAATAATGGTGCCAAATACTACCA 58.421 34.615 0.00 0.00 46.25 3.25
1239 2791 5.632118 TGGTGCCAAATACTACCAGTTTTA 58.368 37.500 0.00 0.00 38.23 1.52
1282 2835 9.378551 GGATAGTTTCATGACACAGTTTACATA 57.621 33.333 14.19 0.00 0.00 2.29
1289 2842 9.936759 TTCATGACACAGTTTACATATTACTGA 57.063 29.630 8.32 0.00 41.33 3.41
1290 2843 9.366216 TCATGACACAGTTTACATATTACTGAC 57.634 33.333 8.32 1.41 41.33 3.51
1291 2844 9.150348 CATGACACAGTTTACATATTACTGACA 57.850 33.333 8.32 6.05 41.33 3.58
1344 2897 4.809193 AGATTAGACTCAGCATCCTACCA 58.191 43.478 0.00 0.00 0.00 3.25
1354 2907 1.683917 GCATCCTACCATCTCTGTCGT 59.316 52.381 0.00 0.00 0.00 4.34
1375 2928 5.760743 TCGTTGTCACCATGATTCAGTTAAA 59.239 36.000 0.00 0.00 0.00 1.52
1455 3017 6.442564 TGTTCCCTGGTATAATATTATCCGCT 59.557 38.462 11.28 0.00 0.00 5.52
1491 3053 8.846943 TGAATTCACATTCTTACACTATGTGT 57.153 30.769 3.38 8.43 45.76 3.72
1537 3106 6.931840 AGTCACTTTTGTAATCTGTTCTCCTC 59.068 38.462 0.00 0.00 0.00 3.71
1545 3120 5.775195 TGTAATCTGTTCTCCTCAGTTCAGA 59.225 40.000 0.00 0.00 36.08 3.27
1580 3155 0.821711 TGGTGCCAACTGCCAAGTAC 60.822 55.000 0.00 0.00 40.16 2.73
1587 3162 3.056035 GCCAACTGCCAAGTACTACTACT 60.056 47.826 0.00 0.00 34.77 2.57
1635 3212 3.812053 GGACTCCACATCACAATCATAGC 59.188 47.826 0.00 0.00 0.00 2.97
1699 3280 5.674525 TGTTATCTGCCTTGTCTATTCCAG 58.325 41.667 0.00 0.00 0.00 3.86
1761 3343 5.874810 TCACTGTTACCATTCTAGATGCAAC 59.125 40.000 0.00 0.00 0.00 4.17
1771 3353 2.101415 TCTAGATGCAACATCCTGACGG 59.899 50.000 4.00 0.00 0.00 4.79
1772 3354 0.904649 AGATGCAACATCCTGACGGA 59.095 50.000 4.00 0.00 45.16 4.69
1773 3355 1.134580 AGATGCAACATCCTGACGGAG 60.135 52.381 4.00 0.00 44.06 4.63
1774 3356 0.107508 ATGCAACATCCTGACGGAGG 60.108 55.000 0.00 0.00 46.35 4.30
1775 3357 1.450312 GCAACATCCTGACGGAGGG 60.450 63.158 3.12 0.00 45.23 4.30
1776 3358 1.221840 CAACATCCTGACGGAGGGG 59.778 63.158 3.12 0.00 45.23 4.79
1777 3359 1.080354 AACATCCTGACGGAGGGGA 59.920 57.895 3.12 0.00 45.23 4.81
1778 3360 0.546747 AACATCCTGACGGAGGGGAA 60.547 55.000 3.12 0.00 45.23 3.97
1779 3361 1.265454 ACATCCTGACGGAGGGGAAC 61.265 60.000 3.12 0.00 45.23 3.62
1780 3362 2.058595 ATCCTGACGGAGGGGAACG 61.059 63.158 3.12 0.00 44.06 3.95
1781 3363 2.800159 ATCCTGACGGAGGGGAACGT 62.800 60.000 3.12 0.00 44.06 3.99
1782 3364 2.580601 CCTGACGGAGGGGAACGTT 61.581 63.158 0.00 0.00 44.24 3.99
1783 3365 1.370064 CTGACGGAGGGGAACGTTT 59.630 57.895 0.46 0.00 44.24 3.60
1784 3366 0.949105 CTGACGGAGGGGAACGTTTG 60.949 60.000 0.46 0.00 44.24 2.93
1785 3367 1.670083 GACGGAGGGGAACGTTTGG 60.670 63.158 0.46 0.00 44.24 3.28
1786 3368 2.387476 GACGGAGGGGAACGTTTGGT 62.387 60.000 0.46 0.00 44.24 3.67
1787 3369 1.228033 CGGAGGGGAACGTTTGGTT 60.228 57.895 0.46 0.00 42.96 3.67
1796 3378 1.971481 AACGTTTGGTTCCTGGGTAC 58.029 50.000 0.00 0.00 31.79 3.34
1797 3379 0.838608 ACGTTTGGTTCCTGGGTACA 59.161 50.000 0.00 0.00 0.00 2.90
1798 3380 1.422402 ACGTTTGGTTCCTGGGTACAT 59.578 47.619 0.00 0.00 0.00 2.29
1799 3381 2.638855 ACGTTTGGTTCCTGGGTACATA 59.361 45.455 0.00 0.00 0.00 2.29
1800 3382 3.004862 CGTTTGGTTCCTGGGTACATAC 58.995 50.000 0.00 0.00 0.00 2.39
1801 3383 3.557475 CGTTTGGTTCCTGGGTACATACA 60.557 47.826 0.00 0.00 0.00 2.29
1802 3384 4.595986 GTTTGGTTCCTGGGTACATACAT 58.404 43.478 0.00 0.00 0.00 2.29
1803 3385 5.627272 CGTTTGGTTCCTGGGTACATACATA 60.627 44.000 0.00 0.00 0.00 2.29
1804 3386 5.362105 TTGGTTCCTGGGTACATACATAC 57.638 43.478 0.00 0.00 0.00 2.39
1805 3387 3.712733 TGGTTCCTGGGTACATACATACC 59.287 47.826 0.00 0.00 43.53 2.73
1894 3476 7.745620 AAAACTTGACCTTCCATTGTACTAG 57.254 36.000 0.00 0.00 0.00 2.57
1895 3477 6.435292 AACTTGACCTTCCATTGTACTAGT 57.565 37.500 0.00 0.00 0.00 2.57
1896 3478 7.549147 AACTTGACCTTCCATTGTACTAGTA 57.451 36.000 0.00 0.00 0.00 1.82
1897 3479 7.549147 ACTTGACCTTCCATTGTACTAGTAA 57.451 36.000 3.61 0.00 0.00 2.24
1898 3480 7.612677 ACTTGACCTTCCATTGTACTAGTAAG 58.387 38.462 3.61 0.00 0.00 2.34
1899 3481 7.453752 ACTTGACCTTCCATTGTACTAGTAAGA 59.546 37.037 3.61 0.00 0.00 2.10
1900 3482 7.786046 TGACCTTCCATTGTACTAGTAAGAA 57.214 36.000 3.61 1.15 0.00 2.52
1901 3483 8.197592 TGACCTTCCATTGTACTAGTAAGAAA 57.802 34.615 3.61 0.45 0.00 2.52
1902 3484 8.653191 TGACCTTCCATTGTACTAGTAAGAAAA 58.347 33.333 3.61 0.00 0.00 2.29
1903 3485 9.152595 GACCTTCCATTGTACTAGTAAGAAAAG 57.847 37.037 3.61 4.51 0.00 2.27
1904 3486 8.657712 ACCTTCCATTGTACTAGTAAGAAAAGT 58.342 33.333 3.61 2.14 0.00 2.66
1905 3487 9.503399 CCTTCCATTGTACTAGTAAGAAAAGTT 57.497 33.333 3.61 0.00 0.00 2.66
1907 3489 9.498176 TTCCATTGTACTAGTAAGAAAAGTTCC 57.502 33.333 3.61 0.00 0.00 3.62
1908 3490 8.653191 TCCATTGTACTAGTAAGAAAAGTTCCA 58.347 33.333 3.61 0.00 0.00 3.53
1909 3491 9.280174 CCATTGTACTAGTAAGAAAAGTTCCAA 57.720 33.333 3.61 1.24 0.00 3.53
1911 3493 9.841295 ATTGTACTAGTAAGAAAAGTTCCAACA 57.159 29.630 3.61 0.00 0.00 3.33
1912 3494 9.669887 TTGTACTAGTAAGAAAAGTTCCAACAA 57.330 29.630 3.61 0.00 0.00 2.83
1913 3495 9.669887 TGTACTAGTAAGAAAAGTTCCAACAAA 57.330 29.630 3.61 0.00 0.00 2.83
1931 3513 9.541143 TCCAACAAAATAAAATTCCTCTTTGAC 57.459 29.630 8.96 0.00 0.00 3.18
1932 3514 9.546428 CCAACAAAATAAAATTCCTCTTTGACT 57.454 29.630 8.96 0.00 0.00 3.41
1940 3522 9.799106 ATAAAATTCCTCTTTGACTTCTTCTCA 57.201 29.630 0.00 0.00 0.00 3.27
1941 3523 8.525290 AAAATTCCTCTTTGACTTCTTCTCAA 57.475 30.769 0.00 0.00 0.00 3.02
1942 3524 8.525290 AAATTCCTCTTTGACTTCTTCTCAAA 57.475 30.769 0.00 0.00 36.44 2.69
1943 3525 8.525290 AATTCCTCTTTGACTTCTTCTCAAAA 57.475 30.769 0.00 0.00 37.22 2.44
1944 3526 7.938140 TTCCTCTTTGACTTCTTCTCAAAAA 57.062 32.000 0.00 0.00 37.22 1.94
1968 3550 8.507470 AAAGACGAATTTTCAGTCAAAATAGC 57.493 30.769 13.63 0.00 42.86 2.97
1969 3551 6.307155 AGACGAATTTTCAGTCAAAATAGCG 58.693 36.000 13.63 6.06 42.86 4.26
1970 3552 5.997385 ACGAATTTTCAGTCAAAATAGCGT 58.003 33.333 7.06 7.06 42.86 5.07
1971 3553 5.851177 ACGAATTTTCAGTCAAAATAGCGTG 59.149 36.000 10.63 0.00 44.92 5.34
1972 3554 6.077197 CGAATTTTCAGTCAAAATAGCGTGA 58.923 36.000 0.00 0.00 42.86 4.35
1973 3555 6.577055 CGAATTTTCAGTCAAAATAGCGTGAA 59.423 34.615 0.00 0.00 42.86 3.18
1974 3556 7.408290 CGAATTTTCAGTCAAAATAGCGTGAAC 60.408 37.037 0.00 0.00 42.86 3.18
1975 3557 5.743026 TTTCAGTCAAAATAGCGTGAACA 57.257 34.783 0.00 0.00 0.00 3.18
1976 3558 4.990543 TCAGTCAAAATAGCGTGAACAG 57.009 40.909 0.00 0.00 0.00 3.16
1977 3559 4.377021 TCAGTCAAAATAGCGTGAACAGT 58.623 39.130 0.00 0.00 0.00 3.55
1978 3560 4.211164 TCAGTCAAAATAGCGTGAACAGTG 59.789 41.667 0.00 0.00 0.00 3.66
1979 3561 4.211164 CAGTCAAAATAGCGTGAACAGTGA 59.789 41.667 0.00 0.00 0.00 3.41
1980 3562 4.211374 AGTCAAAATAGCGTGAACAGTGAC 59.789 41.667 0.00 0.00 34.46 3.67
1981 3563 3.496884 TCAAAATAGCGTGAACAGTGACC 59.503 43.478 0.00 0.00 0.00 4.02
1982 3564 3.402628 AAATAGCGTGAACAGTGACCT 57.597 42.857 0.00 0.00 0.00 3.85
1983 3565 4.530710 AAATAGCGTGAACAGTGACCTA 57.469 40.909 0.00 0.00 0.00 3.08
1984 3566 4.737855 AATAGCGTGAACAGTGACCTAT 57.262 40.909 0.00 0.00 0.00 2.57
1985 3567 5.847111 AATAGCGTGAACAGTGACCTATA 57.153 39.130 0.00 0.00 0.00 1.31
1986 3568 5.847111 ATAGCGTGAACAGTGACCTATAA 57.153 39.130 0.00 0.00 0.00 0.98
1987 3569 4.737855 AGCGTGAACAGTGACCTATAAT 57.262 40.909 0.00 0.00 0.00 1.28
1988 3570 5.847111 AGCGTGAACAGTGACCTATAATA 57.153 39.130 0.00 0.00 0.00 0.98
1989 3571 5.833082 AGCGTGAACAGTGACCTATAATAG 58.167 41.667 0.00 0.00 0.00 1.73
1990 3572 4.444720 GCGTGAACAGTGACCTATAATAGC 59.555 45.833 0.00 0.00 0.00 2.97
1991 3573 5.588240 CGTGAACAGTGACCTATAATAGCA 58.412 41.667 0.00 0.00 0.00 3.49
1992 3574 6.040247 CGTGAACAGTGACCTATAATAGCAA 58.960 40.000 0.00 0.00 0.00 3.91
1993 3575 6.533723 CGTGAACAGTGACCTATAATAGCAAA 59.466 38.462 0.00 0.00 0.00 3.68
1994 3576 7.224753 CGTGAACAGTGACCTATAATAGCAAAT 59.775 37.037 0.00 0.00 0.00 2.32
1995 3577 9.542462 GTGAACAGTGACCTATAATAGCAAATA 57.458 33.333 0.00 0.00 0.00 1.40
2013 3595 8.141835 AGCAAATAAATTTTGTCTTTTTCGCT 57.858 26.923 0.00 0.00 0.00 4.93
2014 3596 8.063630 AGCAAATAAATTTTGTCTTTTTCGCTG 58.936 29.630 0.00 0.00 0.00 5.18
2015 3597 7.850492 GCAAATAAATTTTGTCTTTTTCGCTGT 59.150 29.630 0.00 0.00 0.00 4.40
2016 3598 9.146270 CAAATAAATTTTGTCTTTTTCGCTGTG 57.854 29.630 0.00 0.00 0.00 3.66
2017 3599 8.641499 AATAAATTTTGTCTTTTTCGCTGTGA 57.359 26.923 0.00 0.00 0.00 3.58
2018 3600 6.959671 AAATTTTGTCTTTTTCGCTGTGAA 57.040 29.167 0.00 0.00 33.85 3.18
2019 3601 6.573617 AATTTTGTCTTTTTCGCTGTGAAG 57.426 33.333 3.65 0.00 37.99 3.02
2020 3602 4.695217 TTTGTCTTTTTCGCTGTGAAGT 57.305 36.364 3.65 0.00 37.99 3.01
2021 3603 3.944422 TGTCTTTTTCGCTGTGAAGTC 57.056 42.857 3.65 0.00 37.99 3.01
2022 3604 3.266636 TGTCTTTTTCGCTGTGAAGTCA 58.733 40.909 3.65 0.00 37.99 3.41
2023 3605 3.687212 TGTCTTTTTCGCTGTGAAGTCAA 59.313 39.130 3.65 0.00 37.99 3.18
2024 3606 4.029043 GTCTTTTTCGCTGTGAAGTCAAC 58.971 43.478 3.65 0.00 37.99 3.18
2025 3607 2.730183 TTTTCGCTGTGAAGTCAACG 57.270 45.000 3.65 0.00 37.99 4.10
2026 3608 1.647346 TTTCGCTGTGAAGTCAACGT 58.353 45.000 3.65 0.00 37.99 3.99
2027 3609 2.495409 TTCGCTGTGAAGTCAACGTA 57.505 45.000 0.00 0.00 31.44 3.57
2028 3610 2.495409 TCGCTGTGAAGTCAACGTAA 57.505 45.000 0.00 0.00 0.00 3.18
2029 3611 3.021269 TCGCTGTGAAGTCAACGTAAT 57.979 42.857 0.00 0.00 0.00 1.89
2030 3612 3.386486 TCGCTGTGAAGTCAACGTAATT 58.614 40.909 0.00 0.00 0.00 1.40
2031 3613 3.805422 TCGCTGTGAAGTCAACGTAATTT 59.195 39.130 0.00 0.00 0.00 1.82
2032 3614 4.084745 TCGCTGTGAAGTCAACGTAATTTC 60.085 41.667 0.00 0.00 0.00 2.17
2033 3615 4.084537 CGCTGTGAAGTCAACGTAATTTCT 60.085 41.667 0.00 0.00 0.00 2.52
2034 3616 5.558273 CGCTGTGAAGTCAACGTAATTTCTT 60.558 40.000 0.00 0.00 0.00 2.52
2035 3617 6.199393 GCTGTGAAGTCAACGTAATTTCTTT 58.801 36.000 0.00 0.00 0.00 2.52
2036 3618 6.691388 GCTGTGAAGTCAACGTAATTTCTTTT 59.309 34.615 0.00 0.00 0.00 2.27
2037 3619 7.220108 GCTGTGAAGTCAACGTAATTTCTTTTT 59.780 33.333 0.00 0.00 0.00 1.94
2063 3645 9.767684 TTTGTGAAAAATTCATATACTAGTGCG 57.232 29.630 5.39 0.00 42.47 5.34
2064 3646 7.406553 TGTGAAAAATTCATATACTAGTGCGC 58.593 34.615 5.39 0.00 42.47 6.09
2065 3647 7.065204 TGTGAAAAATTCATATACTAGTGCGCA 59.935 33.333 5.66 5.66 42.47 6.09
2066 3648 7.584123 GTGAAAAATTCATATACTAGTGCGCAG 59.416 37.037 12.22 0.60 42.47 5.18
2067 3649 6.545504 AAAATTCATATACTAGTGCGCAGG 57.454 37.500 12.22 6.90 0.00 4.85
2068 3650 4.873746 ATTCATATACTAGTGCGCAGGT 57.126 40.909 12.22 13.17 0.00 4.00
2069 3651 5.977489 ATTCATATACTAGTGCGCAGGTA 57.023 39.130 12.22 15.07 0.00 3.08
2070 3652 5.777850 TTCATATACTAGTGCGCAGGTAA 57.222 39.130 12.22 6.43 0.00 2.85
2071 3653 5.372547 TCATATACTAGTGCGCAGGTAAG 57.627 43.478 12.22 8.59 0.00 2.34
2072 3654 4.825634 TCATATACTAGTGCGCAGGTAAGT 59.174 41.667 12.22 14.43 0.00 2.24
2073 3655 3.712091 ATACTAGTGCGCAGGTAAGTC 57.288 47.619 12.22 0.00 0.00 3.01
2074 3656 1.254026 ACTAGTGCGCAGGTAAGTCA 58.746 50.000 12.22 0.00 0.00 3.41
2075 3657 1.616865 ACTAGTGCGCAGGTAAGTCAA 59.383 47.619 12.22 0.00 0.00 3.18
2076 3658 2.263077 CTAGTGCGCAGGTAAGTCAAG 58.737 52.381 12.22 0.00 0.00 3.02
2077 3659 0.393077 AGTGCGCAGGTAAGTCAAGT 59.607 50.000 12.22 0.00 0.00 3.16
2078 3660 1.202651 AGTGCGCAGGTAAGTCAAGTT 60.203 47.619 12.22 0.00 0.00 2.66
2079 3661 1.602377 GTGCGCAGGTAAGTCAAGTTT 59.398 47.619 12.22 0.00 0.00 2.66
2080 3662 2.803956 GTGCGCAGGTAAGTCAAGTTTA 59.196 45.455 12.22 0.00 0.00 2.01
2081 3663 3.435671 GTGCGCAGGTAAGTCAAGTTTAT 59.564 43.478 12.22 0.00 0.00 1.40
2082 3664 4.069304 TGCGCAGGTAAGTCAAGTTTATT 58.931 39.130 5.66 0.00 0.00 1.40
2083 3665 4.153475 TGCGCAGGTAAGTCAAGTTTATTC 59.847 41.667 5.66 0.00 0.00 1.75
2084 3666 4.392138 GCGCAGGTAAGTCAAGTTTATTCT 59.608 41.667 0.30 0.00 0.00 2.40
2085 3667 5.579511 GCGCAGGTAAGTCAAGTTTATTCTA 59.420 40.000 0.30 0.00 0.00 2.10
2086 3668 6.091713 GCGCAGGTAAGTCAAGTTTATTCTAA 59.908 38.462 0.30 0.00 0.00 2.10
2087 3669 7.360607 GCGCAGGTAAGTCAAGTTTATTCTAAA 60.361 37.037 0.30 0.00 0.00 1.85
2088 3670 8.500773 CGCAGGTAAGTCAAGTTTATTCTAAAA 58.499 33.333 0.00 0.00 0.00 1.52
2171 3753 5.562298 GTACATATGTACCCAGGAACCAT 57.438 43.478 28.48 0.00 43.73 3.55
2172 3754 5.937111 GTACATATGTACCCAGGAACCATT 58.063 41.667 28.48 0.00 43.73 3.16
2173 3755 4.792068 ACATATGTACCCAGGAACCATTG 58.208 43.478 6.56 0.00 0.00 2.82
2174 3756 2.826674 ATGTACCCAGGAACCATTGG 57.173 50.000 0.00 0.00 0.00 3.16
2200 3782 1.913419 TCCCCATCCTGACACCTTAAC 59.087 52.381 0.00 0.00 0.00 2.01
2221 3803 9.577222 CTTAACTAGCTTTCCTAGACTACCTAT 57.423 37.037 0.00 0.00 45.30 2.57
2224 3806 9.933240 AACTAGCTTTCCTAGACTACCTATAAA 57.067 33.333 0.00 0.00 45.30 1.40
2225 3807 9.353431 ACTAGCTTTCCTAGACTACCTATAAAC 57.647 37.037 0.00 0.00 45.30 2.01
2226 3808 9.577222 CTAGCTTTCCTAGACTACCTATAAACT 57.423 37.037 0.00 0.00 45.30 2.66
2227 3809 8.240267 AGCTTTCCTAGACTACCTATAAACTG 57.760 38.462 0.00 0.00 0.00 3.16
2228 3810 8.060075 AGCTTTCCTAGACTACCTATAAACTGA 58.940 37.037 0.00 0.00 0.00 3.41
2229 3811 8.693625 GCTTTCCTAGACTACCTATAAACTGAA 58.306 37.037 0.00 0.00 0.00 3.02
2249 3831 8.227731 ACTGAAAAAGAAAAAGAAAACGACAG 57.772 30.769 0.00 0.00 0.00 3.51
2251 3833 6.090223 TGAAAAAGAAAAAGAAAACGACAGCC 59.910 34.615 0.00 0.00 0.00 4.85
2265 3847 2.524394 AGCCACGTCTCACCCACT 60.524 61.111 0.00 0.00 0.00 4.00
2270 3852 2.165167 CCACGTCTCACCCACTACTTA 58.835 52.381 0.00 0.00 0.00 2.24
2281 3863 5.414454 TCACCCACTACTTATTTGTTCATGC 59.586 40.000 0.00 0.00 0.00 4.06
2302 3885 2.027377 CCACCAGATCAGCAAGAGAGTT 60.027 50.000 0.00 0.00 0.00 3.01
2338 3921 0.441533 GCGACTTCGTAGACTCGTCA 59.558 55.000 0.00 0.00 38.70 4.35
2405 3991 1.501741 CTGGACGCGGAAAACATGG 59.498 57.895 12.47 0.00 0.00 3.66
2568 4154 2.351726 GGTAACTGCATAGCACCTTTCG 59.648 50.000 0.00 0.00 33.79 3.46
2569 4155 0.804989 AACTGCATAGCACCTTTCGC 59.195 50.000 0.00 0.00 33.79 4.70
2579 4167 1.600023 CACCTTTCGCCAACCTTGTA 58.400 50.000 0.00 0.00 0.00 2.41
2696 4341 6.094881 GGAATTCGTTCCATCAATGACCTTTA 59.905 38.462 0.00 0.00 40.79 1.85
2760 4405 6.031751 AGGAAAGAATCAGTGACAGTACTC 57.968 41.667 0.00 0.00 0.00 2.59
2818 4463 5.964958 ATCATCCTTGTTGGTAAGTGTTG 57.035 39.130 0.00 0.00 37.07 3.33
2873 4518 3.751479 AAAAGTTGATGAACCCCTTGC 57.249 42.857 0.00 0.00 31.81 4.01
2880 4525 3.423154 GAACCCCTTGCGCTCACG 61.423 66.667 9.73 0.00 44.07 4.35
2965 4620 4.640771 TTCTGCAATTCCTTACTCCTGT 57.359 40.909 0.00 0.00 0.00 4.00
3080 4738 5.487131 AGAGAAAGAAAACCCTCTGCTCTAT 59.513 40.000 0.00 0.00 36.77 1.98
3095 4753 2.224066 GCTCTATGCGTCAACCTACCAT 60.224 50.000 0.00 0.00 0.00 3.55
3098 4756 0.748005 ATGCGTCAACCTACCATGCC 60.748 55.000 0.00 0.00 0.00 4.40
3106 4764 0.469917 ACCTACCATGCCGGAGATTG 59.530 55.000 5.05 0.00 38.63 2.67
3234 5044 6.598503 TCATCAGATGAGAAGTGCCATAATT 58.401 36.000 9.21 0.00 33.59 1.40
3359 5169 4.804139 AGCCTTGACAGATTAATTACGACG 59.196 41.667 0.00 0.00 0.00 5.12
3438 5248 5.755409 TGTGGTATGTATGGTCAAGAACT 57.245 39.130 0.00 0.00 0.00 3.01
3454 5270 7.816995 GGTCAAGAACTATATGCTATTCTCCTG 59.183 40.741 0.00 0.00 31.05 3.86
3494 5346 9.744468 AAAAAGAATCATGTTGTTTACCTGTAC 57.256 29.630 0.00 0.00 0.00 2.90
3532 5385 6.251655 AGTGATTGCATTCTTGTCTTTCTC 57.748 37.500 9.81 0.00 0.00 2.87
3722 5614 3.265221 AGAACATCAGAGCAATCCAGGAA 59.735 43.478 0.00 0.00 0.00 3.36
3872 5764 6.547880 AGTTTTATGACCCACATACAAACACA 59.452 34.615 17.89 0.00 40.62 3.72
3965 5857 1.137872 CTGATTCAGAGGAAGGGGTCG 59.862 57.143 8.00 0.00 36.25 4.79
4082 5974 0.389166 CGGGCAGTGAGAAGTCTGTC 60.389 60.000 0.00 0.00 35.81 3.51
4112 6004 1.360192 GTATGGCCCGCTGCAAATC 59.640 57.895 0.00 0.00 43.89 2.17
4350 6244 7.799447 TGTTATTACGTATATTTCGCAATTGGC 59.201 33.333 7.72 0.00 39.90 4.52
4352 6246 4.893424 ACGTATATTTCGCAATTGGCTT 57.107 36.364 7.72 0.00 41.67 4.35
4380 6274 6.202762 TGCATAGAAAATGAGTTACGCTATGG 59.797 38.462 0.00 0.00 36.11 2.74
4417 6311 1.808945 GTCATGGCTCACAAGTCAAGG 59.191 52.381 0.00 0.00 41.33 3.61
4470 6388 5.502544 GCTTCAGATTTCTTGTATACGGCAC 60.503 44.000 0.00 0.00 0.00 5.01
4479 6397 8.951787 TTTCTTGTATACGGCACTTATATGTT 57.048 30.769 0.00 0.00 27.99 2.71
4555 6480 7.823745 TCATCTCATACAGATACAGCTTGTA 57.176 36.000 0.00 0.00 40.20 2.41
4621 6546 0.616891 ATGCTGGTGATGCAGAGACA 59.383 50.000 0.00 0.00 44.04 3.41
4643 6568 5.358160 ACAGATGACGATGATCTAACTGACA 59.642 40.000 0.00 0.00 0.00 3.58
4702 6630 8.970859 AACAGTATTATTCTTCATCCTTCCTG 57.029 34.615 0.00 0.00 0.00 3.86
4757 6685 8.408601 ACAATAATGTCTGGCATGAAGAAATAC 58.591 33.333 0.00 0.00 37.96 1.89
4758 6686 5.490139 AATGTCTGGCATGAAGAAATACG 57.510 39.130 0.00 0.00 37.96 3.06
4759 6687 3.937814 TGTCTGGCATGAAGAAATACGT 58.062 40.909 0.00 0.00 0.00 3.57
4840 6773 5.959618 AATGAGGTAAAGTTTGTAGTGGC 57.040 39.130 0.00 0.00 0.00 5.01
4865 6798 6.701145 TGTGCTAGTGGTACAAAAATTTGA 57.299 33.333 12.54 0.00 44.16 2.69
4895 6828 5.298777 GCCTCATTCTTTGCTGTAGATGAAT 59.701 40.000 0.00 0.00 0.00 2.57
4904 6837 9.453572 TCTTTGCTGTAGATGAATAAAATGAGT 57.546 29.630 0.00 0.00 0.00 3.41
4958 6906 6.511416 CATTCTACCTAGAGAGACACCATTG 58.489 44.000 0.00 0.00 33.21 2.82
5123 7071 1.275573 AGAGAAAACGGCTACTGGTCC 59.724 52.381 0.00 0.00 0.00 4.46
5143 7091 0.805322 GACGATGAGCAGCAGACCAG 60.805 60.000 0.00 0.00 0.00 4.00
5196 7147 2.300152 GGAGGCGGTGAAGATGATGATA 59.700 50.000 0.00 0.00 0.00 2.15
5225 7179 3.057736 CCATGAAGAAGGCTGACAACAAG 60.058 47.826 0.00 0.00 0.00 3.16
5235 7189 2.292267 CTGACAACAAGCTGAACCAGT 58.708 47.619 0.00 0.00 33.43 4.00
5373 7327 1.125711 AGGGCTGTTGTAGAACCGGT 61.126 55.000 0.00 0.00 32.20 5.28
5408 7362 0.110056 GCGAATCAGCAGTGTGGTTG 60.110 55.000 0.00 0.00 37.05 3.77
5410 7364 1.069703 CGAATCAGCAGTGTGGTTGTG 60.070 52.381 0.00 0.00 0.00 3.33
5412 7366 0.473755 ATCAGCAGTGTGGTTGTGGA 59.526 50.000 0.00 0.00 0.00 4.02
5413 7367 0.179048 TCAGCAGTGTGGTTGTGGAG 60.179 55.000 0.00 0.00 0.00 3.86
5414 7368 0.464373 CAGCAGTGTGGTTGTGGAGT 60.464 55.000 0.00 0.00 0.00 3.85
5415 7369 0.464373 AGCAGTGTGGTTGTGGAGTG 60.464 55.000 0.00 0.00 0.00 3.51
5416 7370 1.447317 GCAGTGTGGTTGTGGAGTGG 61.447 60.000 0.00 0.00 0.00 4.00
5417 7371 0.819259 CAGTGTGGTTGTGGAGTGGG 60.819 60.000 0.00 0.00 0.00 4.61
5418 7372 1.528309 GTGTGGTTGTGGAGTGGGG 60.528 63.158 0.00 0.00 0.00 4.96
5420 7374 3.897122 TGGTTGTGGAGTGGGGCC 61.897 66.667 0.00 0.00 0.00 5.80
5421 7375 3.580319 GGTTGTGGAGTGGGGCCT 61.580 66.667 0.84 0.00 0.00 5.19
5422 7376 2.282462 GTTGTGGAGTGGGGCCTG 60.282 66.667 0.84 0.00 0.00 4.85
5423 7377 2.449518 TTGTGGAGTGGGGCCTGA 60.450 61.111 0.84 0.00 0.00 3.86
5424 7378 2.081787 TTGTGGAGTGGGGCCTGAA 61.082 57.895 0.84 0.00 0.00 3.02
5425 7379 2.067932 TTGTGGAGTGGGGCCTGAAG 62.068 60.000 0.84 0.00 0.00 3.02
5426 7380 2.121963 TGGAGTGGGGCCTGAAGT 60.122 61.111 0.84 0.00 0.00 3.01
5427 7381 1.774217 TGGAGTGGGGCCTGAAGTT 60.774 57.895 0.84 0.00 0.00 2.66
5428 7382 1.002011 GGAGTGGGGCCTGAAGTTC 60.002 63.158 0.84 0.00 0.00 3.01
5429 7383 1.002011 GAGTGGGGCCTGAAGTTCC 60.002 63.158 0.84 0.00 0.00 3.62
5430 7384 2.035783 GTGGGGCCTGAAGTTCCC 59.964 66.667 0.84 0.00 39.81 3.97
5431 7385 2.451493 TGGGGCCTGAAGTTCCCA 60.451 61.111 0.84 0.00 46.26 4.37
5432 7386 1.856873 TGGGGCCTGAAGTTCCCAT 60.857 57.895 0.84 0.00 43.85 4.00
5433 7387 1.380380 GGGGCCTGAAGTTCCCATG 60.380 63.158 0.84 0.00 41.85 3.66
5439 7393 2.928334 CCTGAAGTTCCCATGATCCAG 58.072 52.381 0.00 0.00 0.00 3.86
5451 7405 0.538584 TGATCCAGTAGGTGCTGCTG 59.461 55.000 0.00 0.00 42.41 4.41
5459 7413 0.695462 TAGGTGCTGCTGGATCCCAT 60.695 55.000 9.90 0.00 30.82 4.00
5463 7417 1.072806 GTGCTGCTGGATCCCATCATA 59.927 52.381 9.90 0.00 28.95 2.15
5464 7418 1.990327 TGCTGCTGGATCCCATCATAT 59.010 47.619 9.90 0.00 28.95 1.78
5465 7419 2.026542 TGCTGCTGGATCCCATCATATC 60.027 50.000 9.90 0.00 28.95 1.63
5466 7420 2.239150 GCTGCTGGATCCCATCATATCT 59.761 50.000 9.90 0.00 28.95 1.98
5469 7423 4.692328 TGCTGGATCCCATCATATCTACT 58.308 43.478 9.90 0.00 30.82 2.57
5470 7424 4.468868 TGCTGGATCCCATCATATCTACTG 59.531 45.833 9.90 0.00 30.82 2.74
5471 7425 4.469227 GCTGGATCCCATCATATCTACTGT 59.531 45.833 9.90 0.00 30.82 3.55
5476 7430 6.183360 GGATCCCATCATATCTACTGTAGCTG 60.183 46.154 9.98 7.54 0.00 4.24
5484 7476 7.035612 TCATATCTACTGTAGCTGTGTTGTTG 58.964 38.462 9.98 0.00 0.00 3.33
5506 7498 5.616270 TGTTCTTGTTGTAAGATGGTAGCA 58.384 37.500 0.00 0.00 0.00 3.49
5560 7562 4.609866 TTCTGAAGTAGATCAGGGGAGA 57.390 45.455 4.63 0.00 45.55 3.71
5609 7615 2.374504 AGGATGGATCATGGATGGACAC 59.625 50.000 0.00 0.00 0.00 3.67
5615 7621 5.955944 TGGATCATGGATGGACACATAATT 58.044 37.500 0.00 0.00 37.47 1.40
5659 7673 9.236006 AGTAGTAGCAAAATGAACATGAAGAAT 57.764 29.630 0.00 0.00 0.00 2.40
5692 7717 5.571784 TGATTGATTCATGGCAGAAGAAC 57.428 39.130 0.00 0.00 0.00 3.01
5712 7737 6.951971 AGAACAGTTGGATACTTGCTAGATT 58.048 36.000 1.04 0.00 33.85 2.40
5718 7743 6.155221 AGTTGGATACTTGCTAGATTGACTGA 59.845 38.462 1.04 0.00 31.29 3.41
5725 7750 2.827921 TGCTAGATTGACTGACTGCAGA 59.172 45.455 23.35 0.00 45.17 4.26
5728 7753 4.874966 GCTAGATTGACTGACTGCAGAAAT 59.125 41.667 23.35 9.60 45.17 2.17
5772 7808 1.133325 TGCTAATTGGTGGTGGTGGTT 60.133 47.619 0.00 0.00 0.00 3.67
5775 7814 3.574826 GCTAATTGGTGGTGGTGGTTTTA 59.425 43.478 0.00 0.00 0.00 1.52
5949 7988 1.419374 CGACCTCCTTGAACACGAAG 58.581 55.000 0.00 0.00 0.00 3.79
6038 8077 2.124942 CTTCTCGCCTTGCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
6183 8222 2.431942 GCGTTCGGAGAAGCGGAA 60.432 61.111 0.00 0.00 45.90 4.30
6186 8225 1.448013 GTTCGGAGAAGCGGAAGGG 60.448 63.158 0.00 0.00 45.90 3.95
6189 8228 3.771160 GGAGAAGCGGAAGGGCGA 61.771 66.667 0.00 0.00 38.18 5.54
6216 8255 0.116342 TGGCTGTGTAGAGGAGGGAA 59.884 55.000 0.00 0.00 0.00 3.97
6267 8306 4.201122 GCTGGCCATGGAGGGGAG 62.201 72.222 18.40 3.74 38.09 4.30
6289 8331 4.682714 AAGAGGGGGAGGCTGCCA 62.683 66.667 27.12 0.00 0.00 4.92
6290 8332 3.978241 AAGAGGGGGAGGCTGCCAT 62.978 63.158 27.12 14.62 0.00 4.40
6291 8333 4.201122 GAGGGGGAGGCTGCCATG 62.201 72.222 27.12 0.00 0.00 3.66
6320 8379 3.452264 CCCATGGCCATCGAATCTATCTA 59.548 47.826 17.61 0.00 0.00 1.98
6321 8380 4.102210 CCCATGGCCATCGAATCTATCTAT 59.898 45.833 17.61 0.00 0.00 1.98
6322 8381 5.295950 CCATGGCCATCGAATCTATCTATC 58.704 45.833 17.61 0.00 0.00 2.08
6323 8382 5.070180 CCATGGCCATCGAATCTATCTATCT 59.930 44.000 17.61 0.00 0.00 1.98
6324 8383 5.843673 TGGCCATCGAATCTATCTATCTC 57.156 43.478 0.00 0.00 0.00 2.75
6325 8384 5.514169 TGGCCATCGAATCTATCTATCTCT 58.486 41.667 0.00 0.00 0.00 3.10
6326 8385 5.954752 TGGCCATCGAATCTATCTATCTCTT 59.045 40.000 0.00 0.00 0.00 2.85
6360 8419 1.228245 GCTGGGTGGACAAGCAGAA 60.228 57.895 0.00 0.00 0.00 3.02
6364 8423 1.070786 GGTGGACAAGCAGAACGGA 59.929 57.895 0.00 0.00 0.00 4.69
6365 8424 0.951040 GGTGGACAAGCAGAACGGAG 60.951 60.000 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 2.500098 GAGTGTTATAGGAGGGCACACA 59.500 50.000 3.76 0.00 40.23 3.72
72 73 2.158943 GGAGTGTTATAGGAGGGCACAC 60.159 54.545 0.00 0.00 38.43 3.82
95 96 7.331026 ACTTTCTGGATGAATGTATCTTCGAA 58.669 34.615 0.00 0.00 40.03 3.71
97 98 7.545362 AACTTTCTGGATGAATGTATCTTCG 57.455 36.000 0.00 0.00 40.65 3.79
122 123 2.507407 AAGATTGGCCGCTCCTAAAA 57.493 45.000 0.00 0.00 35.26 1.52
125 126 1.408266 GGAAAAGATTGGCCGCTCCTA 60.408 52.381 0.00 0.00 35.26 2.94
135 136 1.839424 AAGAGCCCGGGAAAAGATTG 58.161 50.000 29.31 0.00 0.00 2.67
136 137 2.576648 AGTAAGAGCCCGGGAAAAGATT 59.423 45.455 29.31 11.72 0.00 2.40
137 138 2.197465 AGTAAGAGCCCGGGAAAAGAT 58.803 47.619 29.31 6.95 0.00 2.40
138 139 1.652947 AGTAAGAGCCCGGGAAAAGA 58.347 50.000 29.31 1.89 0.00 2.52
139 140 3.622166 TTAGTAAGAGCCCGGGAAAAG 57.378 47.619 29.31 0.00 0.00 2.27
142 143 3.118149 GGATTTTAGTAAGAGCCCGGGAA 60.118 47.826 29.31 5.34 0.00 3.97
143 144 2.436911 GGATTTTAGTAAGAGCCCGGGA 59.563 50.000 29.31 0.00 0.00 5.14
147 148 7.588497 ATTTGATGGATTTTAGTAAGAGCCC 57.412 36.000 5.35 0.00 0.00 5.19
196 197 3.483954 CAGTGGGTGCTCCTAATGG 57.516 57.895 10.37 0.00 36.80 3.16
211 212 2.218603 CTGTTTTGCGTAGGAACCAGT 58.781 47.619 0.00 0.00 37.77 4.00
221 222 3.243267 GGTATGTTTCACCTGTTTTGCGT 60.243 43.478 0.00 0.00 32.98 5.24
223 224 3.305110 CGGTATGTTTCACCTGTTTTGC 58.695 45.455 0.00 0.00 33.62 3.68
229 230 1.434555 TTCGCGGTATGTTTCACCTG 58.565 50.000 6.13 0.00 33.62 4.00
234 235 5.900339 TTCTCATATTCGCGGTATGTTTC 57.100 39.130 22.66 0.00 32.63 2.78
239 240 5.597806 TGAAGTTTCTCATATTCGCGGTAT 58.402 37.500 6.13 2.37 0.00 2.73
305 308 2.159824 GTCCTCTTTGGCTTACGCTTTC 59.840 50.000 0.00 0.00 36.09 2.62
306 309 2.152016 GTCCTCTTTGGCTTACGCTTT 58.848 47.619 0.00 0.00 36.09 3.51
319 322 0.886563 CGACCCACTTACGTCCTCTT 59.113 55.000 0.00 0.00 0.00 2.85
326 329 1.167851 TGAGTACCGACCCACTTACG 58.832 55.000 0.00 0.00 0.00 3.18
330 333 1.278127 CCAAATGAGTACCGACCCACT 59.722 52.381 0.00 0.00 0.00 4.00
342 345 0.719465 GCACGTACGTCCCAAATGAG 59.281 55.000 19.94 5.02 0.00 2.90
343 346 0.671163 GGCACGTACGTCCCAAATGA 60.671 55.000 23.45 0.00 0.00 2.57
344 347 0.951525 TGGCACGTACGTCCCAAATG 60.952 55.000 28.34 11.80 32.17 2.32
345 348 0.672401 CTGGCACGTACGTCCCAAAT 60.672 55.000 29.70 0.00 35.23 2.32
347 350 1.746322 TTCTGGCACGTACGTCCCAA 61.746 55.000 29.70 18.33 35.23 4.12
348 351 1.746322 TTTCTGGCACGTACGTCCCA 61.746 55.000 28.43 28.43 32.77 4.37
349 352 0.390735 ATTTCTGGCACGTACGTCCC 60.391 55.000 21.73 21.73 0.00 4.46
353 356 2.720590 CGTCAAATTTCTGGCACGTACG 60.721 50.000 15.01 15.01 0.00 3.67
355 358 2.756829 TCGTCAAATTTCTGGCACGTA 58.243 42.857 0.00 0.00 0.00 3.57
357 360 2.679355 TTCGTCAAATTTCTGGCACG 57.321 45.000 0.00 0.00 0.00 5.34
370 1031 4.330347 TGTTGATTCACTTTCGTTTCGTCA 59.670 37.500 0.00 0.00 0.00 4.35
378 1039 7.912949 TTGAAGAAATGTTGATTCACTTTCG 57.087 32.000 8.66 0.00 31.72 3.46
380 1041 8.594687 CGTTTTGAAGAAATGTTGATTCACTTT 58.405 29.630 0.00 0.00 31.72 2.66
408 1069 2.256174 CTCAAATGCAAATGAGTGCCG 58.744 47.619 18.96 0.58 44.26 5.69
426 1087 4.024387 TCGTTGTTGTCTTTTACATGCCTC 60.024 41.667 0.00 0.00 38.10 4.70
427 1088 3.880490 TCGTTGTTGTCTTTTACATGCCT 59.120 39.130 0.00 0.00 38.10 4.75
428 1089 4.217754 TCGTTGTTGTCTTTTACATGCC 57.782 40.909 0.00 0.00 38.10 4.40
429 1090 4.439776 GGTTCGTTGTTGTCTTTTACATGC 59.560 41.667 0.00 0.00 38.10 4.06
448 1109 0.095417 GATGAACTTGCTCGCGGTTC 59.905 55.000 15.45 15.45 39.54 3.62
531 2026 2.368548 GCCCTTTGGTTGGTCTCATTTT 59.631 45.455 0.00 0.00 0.00 1.82
532 2027 1.970640 GCCCTTTGGTTGGTCTCATTT 59.029 47.619 0.00 0.00 0.00 2.32
534 2029 0.779997 AGCCCTTTGGTTGGTCTCAT 59.220 50.000 0.00 0.00 0.00 2.90
535 2030 1.440618 TAGCCCTTTGGTTGGTCTCA 58.559 50.000 0.00 0.00 0.00 3.27
536 2031 2.160205 GTTAGCCCTTTGGTTGGTCTC 58.840 52.381 0.00 0.00 0.00 3.36
537 2032 1.203013 GGTTAGCCCTTTGGTTGGTCT 60.203 52.381 0.00 0.00 0.00 3.85
538 2033 1.254026 GGTTAGCCCTTTGGTTGGTC 58.746 55.000 0.00 0.00 0.00 4.02
539 2034 3.450282 GGTTAGCCCTTTGGTTGGT 57.550 52.632 0.00 0.00 0.00 3.67
550 2045 1.780503 AATGCCAATGAGGGTTAGCC 58.219 50.000 0.00 0.00 38.09 3.93
551 2046 3.893326 AAAATGCCAATGAGGGTTAGC 57.107 42.857 0.00 0.00 38.09 3.09
569 2064 9.308318 GTGCTTGTGGAGTTTTTCTTATAAAAA 57.692 29.630 0.00 0.00 0.00 1.94
570 2065 7.923878 GGTGCTTGTGGAGTTTTTCTTATAAAA 59.076 33.333 0.00 0.00 0.00 1.52
571 2066 7.068839 TGGTGCTTGTGGAGTTTTTCTTATAAA 59.931 33.333 0.00 0.00 0.00 1.40
572 2067 6.547880 TGGTGCTTGTGGAGTTTTTCTTATAA 59.452 34.615 0.00 0.00 0.00 0.98
573 2068 6.016610 GTGGTGCTTGTGGAGTTTTTCTTATA 60.017 38.462 0.00 0.00 0.00 0.98
574 2069 4.892934 TGGTGCTTGTGGAGTTTTTCTTAT 59.107 37.500 0.00 0.00 0.00 1.73
575 2070 4.097286 GTGGTGCTTGTGGAGTTTTTCTTA 59.903 41.667 0.00 0.00 0.00 2.10
576 2071 3.096092 TGGTGCTTGTGGAGTTTTTCTT 58.904 40.909 0.00 0.00 0.00 2.52
577 2072 2.427095 GTGGTGCTTGTGGAGTTTTTCT 59.573 45.455 0.00 0.00 0.00 2.52
578 2073 2.794631 CGTGGTGCTTGTGGAGTTTTTC 60.795 50.000 0.00 0.00 0.00 2.29
579 2074 1.134175 CGTGGTGCTTGTGGAGTTTTT 59.866 47.619 0.00 0.00 0.00 1.94
580 2075 0.738389 CGTGGTGCTTGTGGAGTTTT 59.262 50.000 0.00 0.00 0.00 2.43
581 2076 1.724582 GCGTGGTGCTTGTGGAGTTT 61.725 55.000 0.00 0.00 41.73 2.66
582 2077 2.186826 GCGTGGTGCTTGTGGAGTT 61.187 57.895 0.00 0.00 41.73 3.01
583 2078 2.591715 GCGTGGTGCTTGTGGAGT 60.592 61.111 0.00 0.00 41.73 3.85
584 2079 3.716006 CGCGTGGTGCTTGTGGAG 61.716 66.667 0.00 0.00 43.27 3.86
585 2080 4.539083 ACGCGTGGTGCTTGTGGA 62.539 61.111 12.93 0.00 43.27 4.02
586 2081 4.012895 GACGCGTGGTGCTTGTGG 62.013 66.667 20.70 0.00 43.27 4.17
587 2082 4.012895 GGACGCGTGGTGCTTGTG 62.013 66.667 20.70 0.00 43.27 3.33
588 2083 4.539083 TGGACGCGTGGTGCTTGT 62.539 61.111 20.70 0.00 43.27 3.16
589 2084 3.240606 CTTGGACGCGTGGTGCTTG 62.241 63.158 20.70 0.00 43.27 4.01
590 2085 2.972505 CTTGGACGCGTGGTGCTT 60.973 61.111 20.70 0.00 43.27 3.91
594 2089 4.988598 CTGGCTTGGACGCGTGGT 62.989 66.667 20.70 0.00 0.00 4.16
595 2090 4.680237 TCTGGCTTGGACGCGTGG 62.680 66.667 20.70 5.00 0.00 4.94
596 2091 1.577328 AATTCTGGCTTGGACGCGTG 61.577 55.000 20.70 2.28 0.00 5.34
597 2092 0.889186 AAATTCTGGCTTGGACGCGT 60.889 50.000 13.85 13.85 0.00 6.01
598 2093 1.083489 TAAATTCTGGCTTGGACGCG 58.917 50.000 3.53 3.53 0.00 6.01
599 2094 3.057526 AGTTTAAATTCTGGCTTGGACGC 60.058 43.478 0.00 0.00 0.00 5.19
600 2095 4.215399 TGAGTTTAAATTCTGGCTTGGACG 59.785 41.667 11.47 0.00 0.00 4.79
601 2096 5.335976 CCTGAGTTTAAATTCTGGCTTGGAC 60.336 44.000 19.10 0.00 29.68 4.02
602 2097 4.766891 CCTGAGTTTAAATTCTGGCTTGGA 59.233 41.667 19.10 0.00 29.68 3.53
603 2098 4.524328 ACCTGAGTTTAAATTCTGGCTTGG 59.476 41.667 26.39 14.46 37.29 3.61
604 2099 5.464168 CACCTGAGTTTAAATTCTGGCTTG 58.536 41.667 26.39 18.26 37.29 4.01
605 2100 4.524328 CCACCTGAGTTTAAATTCTGGCTT 59.476 41.667 26.39 12.67 37.29 4.35
606 2101 4.082125 CCACCTGAGTTTAAATTCTGGCT 58.918 43.478 26.39 15.95 37.29 4.75
607 2102 4.079253 TCCACCTGAGTTTAAATTCTGGC 58.921 43.478 26.39 0.72 37.29 4.85
608 2103 5.316987 AGTCCACCTGAGTTTAAATTCTGG 58.683 41.667 25.44 25.44 38.91 3.86
609 2104 6.092807 GCTAGTCCACCTGAGTTTAAATTCTG 59.907 42.308 11.47 10.53 0.00 3.02
610 2105 6.174049 GCTAGTCCACCTGAGTTTAAATTCT 58.826 40.000 11.47 0.00 0.00 2.40
611 2106 5.938125 TGCTAGTCCACCTGAGTTTAAATTC 59.062 40.000 3.86 3.86 0.00 2.17
612 2107 5.876357 TGCTAGTCCACCTGAGTTTAAATT 58.124 37.500 0.00 0.00 0.00 1.82
613 2108 5.491982 CTGCTAGTCCACCTGAGTTTAAAT 58.508 41.667 0.00 0.00 0.00 1.40
614 2109 4.802918 GCTGCTAGTCCACCTGAGTTTAAA 60.803 45.833 0.00 0.00 0.00 1.52
615 2110 3.306780 GCTGCTAGTCCACCTGAGTTTAA 60.307 47.826 0.00 0.00 0.00 1.52
616 2111 2.233922 GCTGCTAGTCCACCTGAGTTTA 59.766 50.000 0.00 0.00 0.00 2.01
617 2112 1.002544 GCTGCTAGTCCACCTGAGTTT 59.997 52.381 0.00 0.00 0.00 2.66
618 2113 0.610687 GCTGCTAGTCCACCTGAGTT 59.389 55.000 0.00 0.00 0.00 3.01
619 2114 0.542938 TGCTGCTAGTCCACCTGAGT 60.543 55.000 0.00 0.00 0.00 3.41
620 2115 0.610174 TTGCTGCTAGTCCACCTGAG 59.390 55.000 0.00 0.00 0.00 3.35
621 2116 0.321671 GTTGCTGCTAGTCCACCTGA 59.678 55.000 0.00 0.00 0.00 3.86
622 2117 0.674895 GGTTGCTGCTAGTCCACCTG 60.675 60.000 0.00 0.00 0.00 4.00
623 2118 0.838122 AGGTTGCTGCTAGTCCACCT 60.838 55.000 0.00 0.17 0.00 4.00
624 2119 0.391793 GAGGTTGCTGCTAGTCCACC 60.392 60.000 0.00 0.00 0.00 4.61
625 2120 0.321671 TGAGGTTGCTGCTAGTCCAC 59.678 55.000 0.00 0.00 0.00 4.02
626 2121 0.610174 CTGAGGTTGCTGCTAGTCCA 59.390 55.000 0.00 0.00 0.00 4.02
627 2122 0.742635 GCTGAGGTTGCTGCTAGTCC 60.743 60.000 0.00 0.00 0.00 3.85
628 2123 0.248843 AGCTGAGGTTGCTGCTAGTC 59.751 55.000 0.00 0.00 40.62 2.59
629 2124 2.370718 AGCTGAGGTTGCTGCTAGT 58.629 52.632 0.00 0.00 40.62 2.57
635 2130 3.564345 CTGGGCAGCTGAGGTTGCT 62.564 63.158 20.43 0.00 46.51 3.91
636 2131 3.060615 CTGGGCAGCTGAGGTTGC 61.061 66.667 20.43 0.23 46.58 4.17
646 2141 2.674380 GACCTGTTGGCTGGGCAG 60.674 66.667 0.00 0.00 41.00 4.85
647 2142 4.641645 CGACCTGTTGGCTGGGCA 62.642 66.667 0.00 0.00 41.36 5.36
648 2143 3.628646 ATCGACCTGTTGGCTGGGC 62.629 63.158 0.00 0.00 38.27 5.36
649 2144 1.746615 CATCGACCTGTTGGCTGGG 60.747 63.158 0.00 0.00 37.95 4.45
650 2145 2.401766 GCATCGACCTGTTGGCTGG 61.402 63.158 0.00 0.00 39.33 4.85
651 2146 2.401766 GGCATCGACCTGTTGGCTG 61.402 63.158 2.54 0.00 39.19 4.85
652 2147 2.045926 GGCATCGACCTGTTGGCT 60.046 61.111 2.54 0.00 39.19 4.75
653 2148 3.134127 GGGCATCGACCTGTTGGC 61.134 66.667 1.15 1.15 40.98 4.52
654 2149 2.438434 GGGGCATCGACCTGTTGG 60.438 66.667 0.00 0.00 39.83 3.77
655 2150 2.819595 CGGGGCATCGACCTGTTG 60.820 66.667 0.00 0.00 31.04 3.33
658 2153 4.530857 GGACGGGGCATCGACCTG 62.531 72.222 11.93 0.00 44.23 4.00
659 2154 4.779733 AGGACGGGGCATCGACCT 62.780 66.667 14.88 14.88 46.78 3.85
660 2155 4.530857 CAGGACGGGGCATCGACC 62.531 72.222 11.44 11.44 43.27 4.79
661 2156 2.907897 CTTCAGGACGGGGCATCGAC 62.908 65.000 6.49 0.49 0.00 4.20
662 2157 2.682136 TTCAGGACGGGGCATCGA 60.682 61.111 6.49 0.00 0.00 3.59
663 2158 2.032860 ATCTTCAGGACGGGGCATCG 62.033 60.000 0.00 0.00 0.00 3.84
664 2159 1.048601 TATCTTCAGGACGGGGCATC 58.951 55.000 0.00 0.00 0.00 3.91
665 2160 1.734655 ATATCTTCAGGACGGGGCAT 58.265 50.000 0.00 0.00 0.00 4.40
666 2161 2.158370 TCTATATCTTCAGGACGGGGCA 60.158 50.000 0.00 0.00 0.00 5.36
667 2162 2.526432 TCTATATCTTCAGGACGGGGC 58.474 52.381 0.00 0.00 0.00 5.80
668 2163 6.852420 TTATTCTATATCTTCAGGACGGGG 57.148 41.667 0.00 0.00 0.00 5.73
669 2164 9.191479 AGTATTATTCTATATCTTCAGGACGGG 57.809 37.037 0.00 0.00 0.00 5.28
685 2180 8.871125 CCTGGTCCTATGTGTTAGTATTATTCT 58.129 37.037 0.00 0.00 0.00 2.40
686 2181 8.648693 ACCTGGTCCTATGTGTTAGTATTATTC 58.351 37.037 0.00 0.00 0.00 1.75
687 2182 8.562949 ACCTGGTCCTATGTGTTAGTATTATT 57.437 34.615 0.00 0.00 0.00 1.40
688 2183 7.039923 CGACCTGGTCCTATGTGTTAGTATTAT 60.040 40.741 20.68 0.00 0.00 1.28
689 2184 6.263842 CGACCTGGTCCTATGTGTTAGTATTA 59.736 42.308 20.68 0.00 0.00 0.98
690 2185 5.068723 CGACCTGGTCCTATGTGTTAGTATT 59.931 44.000 20.68 0.00 0.00 1.89
691 2186 4.583489 CGACCTGGTCCTATGTGTTAGTAT 59.417 45.833 20.68 0.00 0.00 2.12
692 2187 3.949754 CGACCTGGTCCTATGTGTTAGTA 59.050 47.826 20.68 0.00 0.00 1.82
693 2188 2.758979 CGACCTGGTCCTATGTGTTAGT 59.241 50.000 20.68 0.00 0.00 2.24
694 2189 2.100916 CCGACCTGGTCCTATGTGTTAG 59.899 54.545 20.68 2.93 0.00 2.34
695 2190 2.104967 CCGACCTGGTCCTATGTGTTA 58.895 52.381 20.68 0.00 0.00 2.41
696 2191 0.902531 CCGACCTGGTCCTATGTGTT 59.097 55.000 20.68 0.00 0.00 3.32
697 2192 0.976073 CCCGACCTGGTCCTATGTGT 60.976 60.000 20.68 0.00 35.15 3.72
698 2193 0.686441 TCCCGACCTGGTCCTATGTG 60.686 60.000 20.68 5.77 35.15 3.21
699 2194 0.397254 CTCCCGACCTGGTCCTATGT 60.397 60.000 20.68 0.00 35.15 2.29
700 2195 0.397254 ACTCCCGACCTGGTCCTATG 60.397 60.000 20.68 11.24 35.15 2.23
701 2196 1.229131 TACTCCCGACCTGGTCCTAT 58.771 55.000 20.68 5.28 35.15 2.57
702 2197 1.002069 TTACTCCCGACCTGGTCCTA 58.998 55.000 20.68 5.83 35.15 2.94
703 2198 0.324460 CTTACTCCCGACCTGGTCCT 60.324 60.000 20.68 1.64 35.15 3.85
704 2199 0.614134 ACTTACTCCCGACCTGGTCC 60.614 60.000 20.68 3.91 35.15 4.46
705 2200 2.134789 TACTTACTCCCGACCTGGTC 57.865 55.000 16.99 16.99 35.15 4.02
706 2201 2.564504 GTTTACTTACTCCCGACCTGGT 59.435 50.000 0.00 0.00 35.15 4.00
707 2202 2.416431 CGTTTACTTACTCCCGACCTGG 60.416 54.545 0.00 0.00 37.55 4.45
708 2203 2.489329 TCGTTTACTTACTCCCGACCTG 59.511 50.000 0.00 0.00 0.00 4.00
709 2204 2.795329 TCGTTTACTTACTCCCGACCT 58.205 47.619 0.00 0.00 0.00 3.85
710 2205 3.505836 CTTCGTTTACTTACTCCCGACC 58.494 50.000 0.00 0.00 0.00 4.79
711 2206 3.191371 TCCTTCGTTTACTTACTCCCGAC 59.809 47.826 0.00 0.00 0.00 4.79
712 2207 3.420893 TCCTTCGTTTACTTACTCCCGA 58.579 45.455 0.00 0.00 0.00 5.14
713 2208 3.428589 CCTCCTTCGTTTACTTACTCCCG 60.429 52.174 0.00 0.00 0.00 5.14
714 2209 3.678252 GCCTCCTTCGTTTACTTACTCCC 60.678 52.174 0.00 0.00 0.00 4.30
715 2210 3.519579 GCCTCCTTCGTTTACTTACTCC 58.480 50.000 0.00 0.00 0.00 3.85
716 2211 3.519579 GGCCTCCTTCGTTTACTTACTC 58.480 50.000 0.00 0.00 0.00 2.59
717 2212 2.094338 CGGCCTCCTTCGTTTACTTACT 60.094 50.000 0.00 0.00 0.00 2.24
718 2213 2.094545 TCGGCCTCCTTCGTTTACTTAC 60.095 50.000 0.00 0.00 0.00 2.34
719 2214 2.165030 CTCGGCCTCCTTCGTTTACTTA 59.835 50.000 0.00 0.00 0.00 2.24
720 2215 0.971386 TCGGCCTCCTTCGTTTACTT 59.029 50.000 0.00 0.00 0.00 2.24
721 2216 0.531200 CTCGGCCTCCTTCGTTTACT 59.469 55.000 0.00 0.00 0.00 2.24
722 2217 1.082679 GCTCGGCCTCCTTCGTTTAC 61.083 60.000 0.00 0.00 0.00 2.01
723 2218 1.217244 GCTCGGCCTCCTTCGTTTA 59.783 57.895 0.00 0.00 0.00 2.01
724 2219 2.047179 GCTCGGCCTCCTTCGTTT 60.047 61.111 0.00 0.00 0.00 3.60
725 2220 4.436998 CGCTCGGCCTCCTTCGTT 62.437 66.667 0.00 0.00 0.00 3.85
734 2229 4.803426 CCACACTCTCGCTCGGCC 62.803 72.222 0.00 0.00 0.00 6.13
941 2464 1.671901 GCGGAGGAGAGAAGGGACAG 61.672 65.000 0.00 0.00 0.00 3.51
942 2465 1.682684 GCGGAGGAGAGAAGGGACA 60.683 63.158 0.00 0.00 0.00 4.02
943 2466 1.380650 AGCGGAGGAGAGAAGGGAC 60.381 63.158 0.00 0.00 0.00 4.46
944 2467 1.076632 GAGCGGAGGAGAGAAGGGA 60.077 63.158 0.00 0.00 0.00 4.20
945 2468 2.485795 CGAGCGGAGGAGAGAAGGG 61.486 68.421 0.00 0.00 0.00 3.95
946 2469 3.115556 CGAGCGGAGGAGAGAAGG 58.884 66.667 0.00 0.00 0.00 3.46
1177 2729 0.246635 GCTCAGAAAGCCGGACTACA 59.753 55.000 5.05 0.00 45.92 2.74
1198 2750 5.390387 GCACCATTATTAGTTGGGGGATTA 58.610 41.667 0.00 0.00 36.88 1.75
1212 2764 6.013554 ACTGGTAGTATTTGGCACCATTAT 57.986 37.500 0.00 0.00 40.19 1.28
1249 2801 9.147732 ACTGTGTCATGAAACTATCCATCTATA 57.852 33.333 16.96 0.00 0.00 1.31
1354 2907 8.298854 CATTCTTTAACTGAATCATGGTGACAA 58.701 33.333 0.00 0.00 36.55 3.18
1375 2928 1.913778 TGTTGCATGCTGGACATTCT 58.086 45.000 20.33 0.00 36.64 2.40
1486 3048 8.768397 TGTAGGATGTATAGGAAGAAAACACAT 58.232 33.333 0.00 0.00 0.00 3.21
1491 3053 8.475639 GTGACTGTAGGATGTATAGGAAGAAAA 58.524 37.037 0.00 0.00 0.00 2.29
1525 3094 3.513515 GGTCTGAACTGAGGAGAACAGAT 59.486 47.826 0.00 0.00 37.31 2.90
1537 3106 3.758554 CACTAAATTGGGGGTCTGAACTG 59.241 47.826 0.00 0.00 0.00 3.16
1607 3182 5.189539 TGATTGTGATGTGGAGTCCAATCTA 59.810 40.000 15.09 9.70 39.11 1.98
1612 3187 4.684214 GCTATGATTGTGATGTGGAGTCCA 60.684 45.833 8.12 8.12 0.00 4.02
1614 3189 4.445453 TGCTATGATTGTGATGTGGAGTC 58.555 43.478 0.00 0.00 0.00 3.36
1615 3190 4.492494 TGCTATGATTGTGATGTGGAGT 57.508 40.909 0.00 0.00 0.00 3.85
1616 3191 5.306394 AGATGCTATGATTGTGATGTGGAG 58.694 41.667 0.00 0.00 0.00 3.86
1777 3359 1.212441 TGTACCCAGGAACCAAACGTT 59.788 47.619 0.00 0.00 37.41 3.99
1778 3360 0.838608 TGTACCCAGGAACCAAACGT 59.161 50.000 0.00 0.00 0.00 3.99
1779 3361 2.194201 ATGTACCCAGGAACCAAACG 57.806 50.000 0.00 0.00 0.00 3.60
1780 3362 4.023726 TGTATGTACCCAGGAACCAAAC 57.976 45.455 0.00 0.00 0.00 2.93
1781 3363 4.938575 ATGTATGTACCCAGGAACCAAA 57.061 40.909 0.00 0.00 0.00 3.28
1782 3364 4.164604 GGTATGTATGTACCCAGGAACCAA 59.835 45.833 0.00 0.00 38.54 3.67
1783 3365 3.712733 GGTATGTATGTACCCAGGAACCA 59.287 47.826 0.00 0.00 38.54 3.67
1784 3366 4.347360 GGTATGTATGTACCCAGGAACC 57.653 50.000 0.00 0.00 38.54 3.62
1869 3451 7.778382 ACTAGTACAATGGAAGGTCAAGTTTTT 59.222 33.333 0.00 0.00 0.00 1.94
1870 3452 7.287810 ACTAGTACAATGGAAGGTCAAGTTTT 58.712 34.615 0.00 0.00 0.00 2.43
1871 3453 6.838382 ACTAGTACAATGGAAGGTCAAGTTT 58.162 36.000 0.00 0.00 0.00 2.66
1872 3454 6.435292 ACTAGTACAATGGAAGGTCAAGTT 57.565 37.500 0.00 0.00 0.00 2.66
1873 3455 7.453752 TCTTACTAGTACAATGGAAGGTCAAGT 59.546 37.037 0.91 0.00 0.00 3.16
1874 3456 7.837863 TCTTACTAGTACAATGGAAGGTCAAG 58.162 38.462 0.91 0.00 0.00 3.02
1875 3457 7.786046 TCTTACTAGTACAATGGAAGGTCAA 57.214 36.000 0.91 0.00 0.00 3.18
1876 3458 7.786046 TTCTTACTAGTACAATGGAAGGTCA 57.214 36.000 0.91 0.00 0.00 4.02
1877 3459 9.152595 CTTTTCTTACTAGTACAATGGAAGGTC 57.847 37.037 0.91 0.00 0.00 3.85
1878 3460 8.657712 ACTTTTCTTACTAGTACAATGGAAGGT 58.342 33.333 0.91 0.00 0.00 3.50
1879 3461 9.503399 AACTTTTCTTACTAGTACAATGGAAGG 57.497 33.333 0.91 0.00 0.00 3.46
1881 3463 9.498176 GGAACTTTTCTTACTAGTACAATGGAA 57.502 33.333 0.91 0.59 0.00 3.53
1882 3464 8.653191 TGGAACTTTTCTTACTAGTACAATGGA 58.347 33.333 0.91 0.00 0.00 3.41
1883 3465 8.842358 TGGAACTTTTCTTACTAGTACAATGG 57.158 34.615 0.91 0.00 0.00 3.16
1885 3467 9.841295 TGTTGGAACTTTTCTTACTAGTACAAT 57.159 29.630 0.91 0.00 0.00 2.71
1886 3468 9.669887 TTGTTGGAACTTTTCTTACTAGTACAA 57.330 29.630 0.91 0.00 0.00 2.41
1887 3469 9.669887 TTTGTTGGAACTTTTCTTACTAGTACA 57.330 29.630 0.91 0.00 0.00 2.90
1905 3487 9.541143 GTCAAAGAGGAATTTTATTTTGTTGGA 57.459 29.630 0.00 0.00 0.00 3.53
1906 3488 9.546428 AGTCAAAGAGGAATTTTATTTTGTTGG 57.454 29.630 0.00 0.00 0.00 3.77
1914 3496 9.799106 TGAGAAGAAGTCAAAGAGGAATTTTAT 57.201 29.630 0.00 0.00 0.00 1.40
1915 3497 9.627123 TTGAGAAGAAGTCAAAGAGGAATTTTA 57.373 29.630 0.00 0.00 30.89 1.52
1916 3498 8.525290 TTGAGAAGAAGTCAAAGAGGAATTTT 57.475 30.769 0.00 0.00 30.89 1.82
1917 3499 8.525290 TTTGAGAAGAAGTCAAAGAGGAATTT 57.475 30.769 0.00 0.00 38.66 1.82
1918 3500 8.525290 TTTTGAGAAGAAGTCAAAGAGGAATT 57.475 30.769 0.00 0.00 43.11 2.17
1919 3501 8.525290 TTTTTGAGAAGAAGTCAAAGAGGAAT 57.475 30.769 0.00 0.00 43.11 3.01
1920 3502 7.938140 TTTTTGAGAAGAAGTCAAAGAGGAA 57.062 32.000 0.00 0.00 43.11 3.36
1942 3524 8.968242 GCTATTTTGACTGAAAATTCGTCTTTT 58.032 29.630 14.48 0.00 40.73 2.27
1943 3525 7.323656 CGCTATTTTGACTGAAAATTCGTCTTT 59.676 33.333 14.48 0.00 40.73 2.52
1944 3526 6.797033 CGCTATTTTGACTGAAAATTCGTCTT 59.203 34.615 14.48 5.24 40.73 3.01
1945 3527 6.073222 ACGCTATTTTGACTGAAAATTCGTCT 60.073 34.615 14.48 3.30 42.21 4.18
1946 3528 6.031417 CACGCTATTTTGACTGAAAATTCGTC 59.969 38.462 12.64 9.59 43.01 4.20
1947 3529 5.851177 CACGCTATTTTGACTGAAAATTCGT 59.149 36.000 0.00 0.00 44.19 3.85
1948 3530 6.077197 TCACGCTATTTTGACTGAAAATTCG 58.923 36.000 0.00 0.00 40.73 3.34
1949 3531 7.378461 TGTTCACGCTATTTTGACTGAAAATTC 59.622 33.333 0.00 0.00 40.73 2.17
1950 3532 7.199766 TGTTCACGCTATTTTGACTGAAAATT 58.800 30.769 0.00 0.00 40.73 1.82
1951 3533 6.734137 TGTTCACGCTATTTTGACTGAAAAT 58.266 32.000 0.00 0.00 44.77 1.82
1952 3534 6.125327 TGTTCACGCTATTTTGACTGAAAA 57.875 33.333 0.00 0.00 37.93 2.29
1953 3535 5.295787 ACTGTTCACGCTATTTTGACTGAAA 59.704 36.000 0.00 0.00 0.00 2.69
1954 3536 4.814234 ACTGTTCACGCTATTTTGACTGAA 59.186 37.500 0.00 0.00 0.00 3.02
1955 3537 4.211164 CACTGTTCACGCTATTTTGACTGA 59.789 41.667 0.00 0.00 0.00 3.41
1956 3538 4.211164 TCACTGTTCACGCTATTTTGACTG 59.789 41.667 0.00 0.00 0.00 3.51
1957 3539 4.211374 GTCACTGTTCACGCTATTTTGACT 59.789 41.667 0.00 0.00 0.00 3.41
1958 3540 4.455124 GTCACTGTTCACGCTATTTTGAC 58.545 43.478 0.00 0.00 0.00 3.18
1959 3541 3.496884 GGTCACTGTTCACGCTATTTTGA 59.503 43.478 0.00 0.00 0.00 2.69
1960 3542 3.498397 AGGTCACTGTTCACGCTATTTTG 59.502 43.478 0.00 0.00 0.00 2.44
1961 3543 3.740115 AGGTCACTGTTCACGCTATTTT 58.260 40.909 0.00 0.00 0.00 1.82
1962 3544 3.402628 AGGTCACTGTTCACGCTATTT 57.597 42.857 0.00 0.00 0.00 1.40
1963 3545 4.737855 ATAGGTCACTGTTCACGCTATT 57.262 40.909 0.00 0.00 0.00 1.73
1964 3546 5.847111 TTATAGGTCACTGTTCACGCTAT 57.153 39.130 0.00 0.00 0.00 2.97
1965 3547 5.847111 ATTATAGGTCACTGTTCACGCTA 57.153 39.130 0.00 0.00 0.00 4.26
1966 3548 4.737855 ATTATAGGTCACTGTTCACGCT 57.262 40.909 0.00 0.00 0.00 5.07
1967 3549 4.444720 GCTATTATAGGTCACTGTTCACGC 59.555 45.833 1.12 0.00 0.00 5.34
1968 3550 5.588240 TGCTATTATAGGTCACTGTTCACG 58.412 41.667 1.12 0.00 0.00 4.35
1969 3551 7.843490 TTTGCTATTATAGGTCACTGTTCAC 57.157 36.000 1.12 0.00 0.00 3.18
1987 3569 9.255304 AGCGAAAAAGACAAAATTTATTTGCTA 57.745 25.926 0.00 0.00 32.93 3.49
1988 3570 8.063630 CAGCGAAAAAGACAAAATTTATTTGCT 58.936 29.630 0.00 0.00 32.93 3.91
1989 3571 7.850492 ACAGCGAAAAAGACAAAATTTATTTGC 59.150 29.630 0.00 0.00 32.93 3.68
1990 3572 9.146270 CACAGCGAAAAAGACAAAATTTATTTG 57.854 29.630 0.00 0.00 35.64 2.32
1991 3573 9.092876 TCACAGCGAAAAAGACAAAATTTATTT 57.907 25.926 0.00 0.00 0.00 1.40
1992 3574 8.641499 TCACAGCGAAAAAGACAAAATTTATT 57.359 26.923 0.00 0.00 0.00 1.40
1993 3575 8.641499 TTCACAGCGAAAAAGACAAAATTTAT 57.359 26.923 0.00 0.00 0.00 1.40
1994 3576 7.757624 ACTTCACAGCGAAAAAGACAAAATTTA 59.242 29.630 0.00 0.00 31.71 1.40
1995 3577 6.589907 ACTTCACAGCGAAAAAGACAAAATTT 59.410 30.769 0.00 0.00 31.71 1.82
1996 3578 6.099341 ACTTCACAGCGAAAAAGACAAAATT 58.901 32.000 0.00 0.00 31.71 1.82
1997 3579 5.650543 ACTTCACAGCGAAAAAGACAAAAT 58.349 33.333 0.00 0.00 31.71 1.82
1998 3580 5.054390 ACTTCACAGCGAAAAAGACAAAA 57.946 34.783 0.00 0.00 31.71 2.44
1999 3581 4.155099 TGACTTCACAGCGAAAAAGACAAA 59.845 37.500 0.00 0.00 31.71 2.83
2000 3582 3.687212 TGACTTCACAGCGAAAAAGACAA 59.313 39.130 0.00 0.00 31.71 3.18
2001 3583 3.266636 TGACTTCACAGCGAAAAAGACA 58.733 40.909 0.00 0.00 31.71 3.41
2002 3584 3.944422 TGACTTCACAGCGAAAAAGAC 57.056 42.857 0.00 0.00 31.71 3.01
2003 3585 3.242284 CGTTGACTTCACAGCGAAAAAGA 60.242 43.478 0.00 0.00 44.63 2.52
2004 3586 3.029074 CGTTGACTTCACAGCGAAAAAG 58.971 45.455 0.00 0.00 44.63 2.27
2005 3587 2.417239 ACGTTGACTTCACAGCGAAAAA 59.583 40.909 11.22 0.00 44.63 1.94
2006 3588 2.004017 ACGTTGACTTCACAGCGAAAA 58.996 42.857 11.22 0.00 44.63 2.29
2007 3589 1.647346 ACGTTGACTTCACAGCGAAA 58.353 45.000 11.22 0.00 44.63 3.46
2008 3590 2.495409 TACGTTGACTTCACAGCGAA 57.505 45.000 11.22 0.00 44.63 4.70
2009 3591 2.495409 TTACGTTGACTTCACAGCGA 57.505 45.000 11.22 0.00 44.63 4.93
2010 3592 3.788434 AATTACGTTGACTTCACAGCG 57.212 42.857 0.00 0.00 46.51 5.18
2011 3593 5.344207 AGAAATTACGTTGACTTCACAGC 57.656 39.130 0.00 0.00 0.00 4.40
2012 3594 8.614994 AAAAAGAAATTACGTTGACTTCACAG 57.385 30.769 0.00 0.00 0.00 3.66
2037 3619 9.767684 CGCACTAGTATATGAATTTTTCACAAA 57.232 29.630 0.00 0.00 43.48 2.83
2038 3620 7.908082 GCGCACTAGTATATGAATTTTTCACAA 59.092 33.333 0.30 0.00 43.48 3.33
2039 3621 7.065204 TGCGCACTAGTATATGAATTTTTCACA 59.935 33.333 5.66 0.00 43.48 3.58
2040 3622 7.406553 TGCGCACTAGTATATGAATTTTTCAC 58.593 34.615 5.66 0.00 43.48 3.18
2041 3623 7.254761 CCTGCGCACTAGTATATGAATTTTTCA 60.255 37.037 5.66 0.00 45.01 2.69
2042 3624 7.072030 CCTGCGCACTAGTATATGAATTTTTC 58.928 38.462 5.66 0.00 0.00 2.29
2043 3625 6.542370 ACCTGCGCACTAGTATATGAATTTTT 59.458 34.615 5.66 0.00 0.00 1.94
2044 3626 6.055588 ACCTGCGCACTAGTATATGAATTTT 58.944 36.000 5.66 0.00 0.00 1.82
2045 3627 5.611374 ACCTGCGCACTAGTATATGAATTT 58.389 37.500 5.66 0.00 0.00 1.82
2046 3628 5.215252 ACCTGCGCACTAGTATATGAATT 57.785 39.130 5.66 0.00 0.00 2.17
2047 3629 4.873746 ACCTGCGCACTAGTATATGAAT 57.126 40.909 5.66 0.00 0.00 2.57
2048 3630 5.301045 ACTTACCTGCGCACTAGTATATGAA 59.699 40.000 5.66 0.00 0.00 2.57
2049 3631 4.825634 ACTTACCTGCGCACTAGTATATGA 59.174 41.667 5.66 0.00 0.00 2.15
2050 3632 5.122512 ACTTACCTGCGCACTAGTATATG 57.877 43.478 5.66 5.30 0.00 1.78
2051 3633 4.825634 TGACTTACCTGCGCACTAGTATAT 59.174 41.667 5.66 0.04 0.00 0.86
2052 3634 4.201657 TGACTTACCTGCGCACTAGTATA 58.798 43.478 5.66 0.00 0.00 1.47
2053 3635 3.021695 TGACTTACCTGCGCACTAGTAT 58.978 45.455 5.66 0.00 0.00 2.12
2054 3636 2.439409 TGACTTACCTGCGCACTAGTA 58.561 47.619 5.66 6.00 0.00 1.82
2055 3637 1.254026 TGACTTACCTGCGCACTAGT 58.746 50.000 5.66 7.15 0.00 2.57
2056 3638 2.263077 CTTGACTTACCTGCGCACTAG 58.737 52.381 5.66 3.74 0.00 2.57
2057 3639 1.616865 ACTTGACTTACCTGCGCACTA 59.383 47.619 5.66 0.00 0.00 2.74
2058 3640 0.393077 ACTTGACTTACCTGCGCACT 59.607 50.000 5.66 0.00 0.00 4.40
2059 3641 1.226746 AACTTGACTTACCTGCGCAC 58.773 50.000 5.66 0.00 0.00 5.34
2060 3642 1.961793 AAACTTGACTTACCTGCGCA 58.038 45.000 10.98 10.98 0.00 6.09
2061 3643 4.392138 AGAATAAACTTGACTTACCTGCGC 59.608 41.667 0.00 0.00 0.00 6.09
2062 3644 7.591006 TTAGAATAAACTTGACTTACCTGCG 57.409 36.000 0.00 0.00 0.00 5.18
2150 3732 5.163141 CCAATGGTTCCTGGGTACATATGTA 60.163 44.000 11.62 11.62 0.00 2.29
2151 3733 4.386312 CCAATGGTTCCTGGGTACATATGT 60.386 45.833 13.93 13.93 0.00 2.29
2152 3734 4.144297 CCAATGGTTCCTGGGTACATATG 58.856 47.826 0.00 0.00 0.00 1.78
2153 3735 3.140144 CCCAATGGTTCCTGGGTACATAT 59.860 47.826 0.00 0.00 46.37 1.78
2154 3736 2.512056 CCCAATGGTTCCTGGGTACATA 59.488 50.000 0.00 0.00 46.37 2.29
2155 3737 1.287739 CCCAATGGTTCCTGGGTACAT 59.712 52.381 0.00 0.00 46.37 2.29
2156 3738 0.701731 CCCAATGGTTCCTGGGTACA 59.298 55.000 0.00 0.00 46.37 2.90
2157 3739 3.588742 CCCAATGGTTCCTGGGTAC 57.411 57.895 0.00 0.00 46.37 3.34
2161 3743 3.031013 GGAAATACCCAATGGTTCCTGG 58.969 50.000 10.99 0.00 44.75 4.45
2174 3756 2.422945 GGTGTCAGGATGGGGAAATACC 60.423 54.545 0.00 0.00 36.16 2.73
2175 3757 2.509964 AGGTGTCAGGATGGGGAAATAC 59.490 50.000 0.00 0.00 36.16 1.89
2176 3758 2.858644 AGGTGTCAGGATGGGGAAATA 58.141 47.619 0.00 0.00 36.16 1.40
2177 3759 1.686236 AGGTGTCAGGATGGGGAAAT 58.314 50.000 0.00 0.00 36.16 2.17
2178 3760 1.455822 AAGGTGTCAGGATGGGGAAA 58.544 50.000 0.00 0.00 36.16 3.13
2179 3761 2.307686 GTTAAGGTGTCAGGATGGGGAA 59.692 50.000 0.00 0.00 36.16 3.97
2180 3762 1.913419 GTTAAGGTGTCAGGATGGGGA 59.087 52.381 0.00 0.00 36.16 4.81
2181 3763 1.916181 AGTTAAGGTGTCAGGATGGGG 59.084 52.381 0.00 0.00 36.16 4.96
2182 3764 3.432326 GCTAGTTAAGGTGTCAGGATGGG 60.432 52.174 0.00 0.00 36.16 4.00
2183 3765 3.452627 AGCTAGTTAAGGTGTCAGGATGG 59.547 47.826 0.00 0.00 32.77 3.51
2184 3766 4.744795 AGCTAGTTAAGGTGTCAGGATG 57.255 45.455 0.00 0.00 33.68 3.51
2200 3782 9.577222 AGTTTATAGGTAGTCTAGGAAAGCTAG 57.423 37.037 0.00 0.00 0.00 3.42
2223 3805 8.582433 TGTCGTTTTCTTTTTCTTTTTCAGTT 57.418 26.923 0.00 0.00 0.00 3.16
2224 3806 7.148804 GCTGTCGTTTTCTTTTTCTTTTTCAGT 60.149 33.333 0.00 0.00 0.00 3.41
2225 3807 7.166824 GCTGTCGTTTTCTTTTTCTTTTTCAG 58.833 34.615 0.00 0.00 0.00 3.02
2226 3808 6.090223 GGCTGTCGTTTTCTTTTTCTTTTTCA 59.910 34.615 0.00 0.00 0.00 2.69
2227 3809 6.090223 TGGCTGTCGTTTTCTTTTTCTTTTTC 59.910 34.615 0.00 0.00 0.00 2.29
2228 3810 5.929415 TGGCTGTCGTTTTCTTTTTCTTTTT 59.071 32.000 0.00 0.00 0.00 1.94
2229 3811 5.347635 GTGGCTGTCGTTTTCTTTTTCTTTT 59.652 36.000 0.00 0.00 0.00 2.27
2230 3812 4.862574 GTGGCTGTCGTTTTCTTTTTCTTT 59.137 37.500 0.00 0.00 0.00 2.52
2231 3813 4.421058 GTGGCTGTCGTTTTCTTTTTCTT 58.579 39.130 0.00 0.00 0.00 2.52
2232 3814 3.486875 CGTGGCTGTCGTTTTCTTTTTCT 60.487 43.478 0.00 0.00 0.00 2.52
2233 3815 2.781646 CGTGGCTGTCGTTTTCTTTTTC 59.218 45.455 0.00 0.00 0.00 2.29
2234 3816 2.162809 ACGTGGCTGTCGTTTTCTTTTT 59.837 40.909 0.00 0.00 38.38 1.94
2235 3817 1.741145 ACGTGGCTGTCGTTTTCTTTT 59.259 42.857 0.00 0.00 38.38 2.27
2236 3818 1.329599 GACGTGGCTGTCGTTTTCTTT 59.670 47.619 0.00 0.00 41.64 2.52
2237 3819 0.935196 GACGTGGCTGTCGTTTTCTT 59.065 50.000 0.00 0.00 41.64 2.52
2238 3820 0.104304 AGACGTGGCTGTCGTTTTCT 59.896 50.000 0.00 0.00 43.70 2.52
2239 3821 0.507358 GAGACGTGGCTGTCGTTTTC 59.493 55.000 0.00 3.70 43.70 2.29
2240 3822 0.179094 TGAGACGTGGCTGTCGTTTT 60.179 50.000 0.00 0.00 43.70 2.43
2244 3826 2.430921 GGTGAGACGTGGCTGTCG 60.431 66.667 0.00 1.19 43.70 4.35
2249 3831 1.080025 GTAGTGGGTGAGACGTGGC 60.080 63.158 0.00 0.00 0.00 5.01
2251 3833 4.451629 AATAAGTAGTGGGTGAGACGTG 57.548 45.455 0.00 0.00 0.00 4.49
2265 3847 5.565509 TCTGGTGGCATGAACAAATAAGTA 58.434 37.500 0.00 0.00 0.00 2.24
2270 3852 3.433343 TGATCTGGTGGCATGAACAAAT 58.567 40.909 0.00 0.00 0.00 2.32
2281 3863 1.554160 ACTCTCTTGCTGATCTGGTGG 59.446 52.381 1.46 0.00 0.00 4.61
2302 3885 0.389817 CGCTCCTGGTCACATCGAAA 60.390 55.000 0.00 0.00 0.00 3.46
2405 3991 0.739813 AGCTCGAACGGTATGTTGGC 60.740 55.000 0.00 0.00 42.09 4.52
2556 4142 0.328258 AGGTTGGCGAAAGGTGCTAT 59.672 50.000 0.00 0.00 0.00 2.97
2564 4150 5.477291 TGGAAAATATACAAGGTTGGCGAAA 59.523 36.000 0.00 0.00 0.00 3.46
2568 4154 6.524101 TCTTGGAAAATATACAAGGTTGGC 57.476 37.500 0.00 0.00 41.35 4.52
2569 4155 8.292444 TGATCTTGGAAAATATACAAGGTTGG 57.708 34.615 0.00 0.00 41.35 3.77
2880 4525 8.967918 TCCATGGATATACACTGTATAGTAAGC 58.032 37.037 11.44 0.00 34.74 3.09
2911 4565 3.694043 TCACCTGTAGCAAGCAACATA 57.306 42.857 0.00 0.00 0.00 2.29
2912 4566 2.566833 TCACCTGTAGCAAGCAACAT 57.433 45.000 0.00 0.00 0.00 2.71
2913 4567 2.340210 TTCACCTGTAGCAAGCAACA 57.660 45.000 0.00 0.00 0.00 3.33
3080 4738 1.376683 GGCATGGTAGGTTGACGCA 60.377 57.895 0.00 0.00 0.00 5.24
3095 4753 1.112113 GGTCTAGACAATCTCCGGCA 58.888 55.000 23.91 0.00 0.00 5.69
3098 4756 0.669077 CGGGGTCTAGACAATCTCCG 59.331 60.000 23.91 20.83 0.00 4.63
3106 4764 2.183555 CCGCAACGGGGTCTAGAC 59.816 66.667 14.87 14.87 44.15 2.59
3359 5169 0.253327 ATTCTTTCCGCTCCTCCCAC 59.747 55.000 0.00 0.00 0.00 4.61
3438 5248 6.976934 TGTGTGTCAGGAGAATAGCATATA 57.023 37.500 0.00 0.00 0.00 0.86
3494 5346 9.643693 AATGCAATCACTAAGGAAACAAAATAG 57.356 29.630 0.00 0.00 0.00 1.73
3722 5614 2.590092 GCCCGGTTGCAGAGGTAT 59.410 61.111 0.00 0.00 0.00 2.73
3762 5654 2.286025 GGTCTACGTTGGTGTTGTTGAC 59.714 50.000 0.00 0.00 37.55 3.18
3872 5764 2.104451 CTCTTCATCCACCATAGCTGCT 59.896 50.000 7.57 7.57 0.00 4.24
3965 5857 1.342819 AGCGCCATCAGATTCCTAGAC 59.657 52.381 2.29 0.00 0.00 2.59
4038 5930 1.243902 TCATTTCCGTTTCCACTGCC 58.756 50.000 0.00 0.00 0.00 4.85
4082 5974 2.711542 GGGCCATACATAGGATTTCCG 58.288 52.381 4.39 0.00 42.08 4.30
4232 6124 5.047943 CGAGGATAAATACCTACTCCCTGTG 60.048 48.000 0.00 0.00 37.93 3.66
4342 6236 3.235157 TCTATGCACAAAGCCAATTGC 57.765 42.857 0.00 0.00 44.83 3.56
4350 6244 6.249260 GCGTAACTCATTTTCTATGCACAAAG 59.751 38.462 0.00 0.00 0.00 2.77
4352 6246 5.411361 AGCGTAACTCATTTTCTATGCACAA 59.589 36.000 0.00 0.00 0.00 3.33
4380 6274 8.986477 AGCCATGACAAACATTAAATTCTTAC 57.014 30.769 0.00 0.00 37.07 2.34
4417 6311 8.724229 TCATAATCTATCAATGCACATAACTGC 58.276 33.333 0.00 0.00 37.70 4.40
4460 6378 5.526010 GGCAACATATAAGTGCCGTATAC 57.474 43.478 8.45 0.00 35.86 1.47
4470 6388 9.998106 ACCAACTAATACTAGGCAACATATAAG 57.002 33.333 0.00 0.00 41.41 1.73
4479 6397 7.343357 AGCATTTTACCAACTAATACTAGGCA 58.657 34.615 0.00 0.00 0.00 4.75
4555 6480 5.644977 TGTCGAACACTGAATACTCATCT 57.355 39.130 0.00 0.00 0.00 2.90
4621 6546 6.456795 TTGTCAGTTAGATCATCGTCATCT 57.543 37.500 0.00 0.00 34.80 2.90
4643 6568 7.231519 CACTACCTCCTGAATTTCCTTTTCTTT 59.768 37.037 0.00 0.00 0.00 2.52
4679 6604 7.222872 AGCAGGAAGGATGAAGAATAATACTG 58.777 38.462 0.00 0.00 0.00 2.74
4696 6624 2.083002 GCAGAGAAAAGGAGCAGGAAG 58.917 52.381 0.00 0.00 0.00 3.46
4702 6630 0.603975 ACCGTGCAGAGAAAAGGAGC 60.604 55.000 0.00 0.00 0.00 4.70
4757 6685 4.561735 TTTTCCCAGAAGCAAGTTAACG 57.438 40.909 0.00 0.00 0.00 3.18
4758 6686 6.332735 AGATTTTCCCAGAAGCAAGTTAAC 57.667 37.500 0.00 0.00 0.00 2.01
4759 6687 6.976934 AAGATTTTCCCAGAAGCAAGTTAA 57.023 33.333 0.00 0.00 0.00 2.01
4820 6752 4.699925 AGCCACTACAAACTTTACCTCA 57.300 40.909 0.00 0.00 0.00 3.86
4838 6771 2.178912 TTGTACCACTAGCACAAGCC 57.821 50.000 0.00 0.00 43.56 4.35
4840 6773 7.199766 TCAAATTTTTGTACCACTAGCACAAG 58.800 34.615 3.18 0.00 39.18 3.16
4865 6798 3.151912 AGCAAAGAATGAGGCTGACTT 57.848 42.857 0.00 0.00 34.83 3.01
4910 6843 1.606668 CACCGCAACAGTTGGTATGTT 59.393 47.619 15.28 0.00 41.47 2.71
4958 6906 4.081586 ACCCTGAACTTTCCTATTCGACTC 60.082 45.833 0.00 0.00 0.00 3.36
5027 6975 1.666054 CTGCTTCCTCCATCTGCTTC 58.334 55.000 0.00 0.00 0.00 3.86
5123 7071 1.875813 GGTCTGCTGCTCATCGTCG 60.876 63.158 0.00 0.00 0.00 5.12
5235 7189 0.690192 TCGTTTCCCATCTCCAGCAA 59.310 50.000 0.00 0.00 0.00 3.91
5389 7343 0.110056 CAACCACACTGCTGATTCGC 60.110 55.000 0.00 0.00 0.00 4.70
5391 7345 1.267806 CCACAACCACACTGCTGATTC 59.732 52.381 0.00 0.00 0.00 2.52
5408 7362 2.069165 AACTTCAGGCCCCACTCCAC 62.069 60.000 0.00 0.00 0.00 4.02
5410 7364 1.002011 GAACTTCAGGCCCCACTCC 60.002 63.158 0.00 0.00 0.00 3.85
5412 7366 2.539081 GGGAACTTCAGGCCCCACT 61.539 63.158 0.00 0.00 38.69 4.00
5413 7367 2.035783 GGGAACTTCAGGCCCCAC 59.964 66.667 0.00 0.00 38.69 4.61
5414 7368 2.451493 TGGGAACTTCAGGCCCCA 60.451 61.111 0.00 0.00 45.92 4.96
5415 7369 1.380380 CATGGGAACTTCAGGCCCC 60.380 63.158 0.00 0.00 41.31 5.80
5416 7370 0.259938 ATCATGGGAACTTCAGGCCC 59.740 55.000 0.00 0.00 42.38 5.80
5417 7371 1.685148 GATCATGGGAACTTCAGGCC 58.315 55.000 0.00 0.00 0.00 5.19
5418 7372 1.064463 TGGATCATGGGAACTTCAGGC 60.064 52.381 0.00 0.00 0.00 4.85
5420 7374 3.641434 ACTGGATCATGGGAACTTCAG 57.359 47.619 0.00 0.00 0.00 3.02
5421 7375 3.455910 CCTACTGGATCATGGGAACTTCA 59.544 47.826 0.00 0.00 34.57 3.02
5422 7376 3.456277 ACCTACTGGATCATGGGAACTTC 59.544 47.826 0.00 0.00 37.04 3.01
5423 7377 3.200825 CACCTACTGGATCATGGGAACTT 59.799 47.826 0.00 0.00 37.04 2.66
5424 7378 2.774234 CACCTACTGGATCATGGGAACT 59.226 50.000 0.00 0.00 37.04 3.01
5425 7379 2.746472 GCACCTACTGGATCATGGGAAC 60.746 54.545 0.00 0.00 37.04 3.62
5426 7380 1.490490 GCACCTACTGGATCATGGGAA 59.510 52.381 0.00 0.00 37.04 3.97
5427 7381 1.131638 GCACCTACTGGATCATGGGA 58.868 55.000 0.00 0.00 37.04 4.37
5428 7382 1.135094 AGCACCTACTGGATCATGGG 58.865 55.000 0.00 0.00 37.04 4.00
5429 7383 1.813092 GCAGCACCTACTGGATCATGG 60.813 57.143 0.00 0.00 38.16 3.66
5430 7384 1.140452 AGCAGCACCTACTGGATCATG 59.860 52.381 0.00 0.00 38.16 3.07
5431 7385 1.140452 CAGCAGCACCTACTGGATCAT 59.860 52.381 0.00 0.00 38.16 2.45
5432 7386 0.538584 CAGCAGCACCTACTGGATCA 59.461 55.000 0.00 0.00 38.16 2.92
5433 7387 3.376218 CAGCAGCACCTACTGGATC 57.624 57.895 0.00 0.00 38.16 3.36
5439 7393 1.147153 GGGATCCAGCAGCACCTAC 59.853 63.158 15.23 0.00 0.00 3.18
5451 7405 5.896678 AGCTACAGTAGATATGATGGGATCC 59.103 44.000 12.15 1.92 0.00 3.36
5459 7413 6.775594 ACAACACAGCTACAGTAGATATGA 57.224 37.500 11.10 0.00 0.00 2.15
5463 7417 5.215252 ACAACAACACAGCTACAGTAGAT 57.785 39.130 12.15 1.33 0.00 1.98
5464 7418 4.665833 ACAACAACACAGCTACAGTAGA 57.334 40.909 12.15 0.00 0.00 2.59
5465 7419 5.050490 AGAACAACAACACAGCTACAGTAG 58.950 41.667 2.85 2.85 0.00 2.57
5466 7420 5.018539 AGAACAACAACACAGCTACAGTA 57.981 39.130 0.00 0.00 0.00 2.74
5469 7423 4.006989 ACAAGAACAACAACACAGCTACA 58.993 39.130 0.00 0.00 0.00 2.74
5470 7424 4.616181 ACAAGAACAACAACACAGCTAC 57.384 40.909 0.00 0.00 0.00 3.58
5471 7425 4.457603 ACAACAAGAACAACAACACAGCTA 59.542 37.500 0.00 0.00 0.00 3.32
5476 7430 6.472163 CCATCTTACAACAAGAACAACAACAC 59.528 38.462 0.00 0.00 0.00 3.32
5484 7476 6.204882 ACTTGCTACCATCTTACAACAAGAAC 59.795 38.462 6.43 0.00 37.34 3.01
5560 7562 1.578215 AGGGAAGGATAGTCTGCTCCT 59.422 52.381 0.95 0.95 43.86 3.69
5659 7673 5.364446 CCATGAATCAATCAATCAAGGGGAA 59.636 40.000 0.00 0.00 42.54 3.97
5692 7717 6.257411 CAGTCAATCTAGCAAGTATCCAACTG 59.743 42.308 0.00 0.00 38.88 3.16
5712 7737 6.015434 TCAGTAGTAATTTCTGCAGTCAGTCA 60.015 38.462 14.67 0.00 41.10 3.41
5718 7743 8.677148 TCTTTTTCAGTAGTAATTTCTGCAGT 57.323 30.769 14.67 0.00 0.00 4.40
5725 7750 6.717084 AGCTGCCTCTTTTTCAGTAGTAATTT 59.283 34.615 0.00 0.00 0.00 1.82
5728 7753 5.228945 AGCTGCCTCTTTTTCAGTAGTAA 57.771 39.130 0.00 0.00 0.00 2.24
5772 7808 4.440127 GTCCCCGTCCGCGCTAAA 62.440 66.667 5.56 0.00 36.67 1.85
6182 8221 3.953775 CCACCACCACTCGCCCTT 61.954 66.667 0.00 0.00 0.00 3.95
6186 8225 4.626081 ACAGCCACCACCACTCGC 62.626 66.667 0.00 0.00 0.00 5.03
6189 8228 0.762842 TCTACACAGCCACCACCACT 60.763 55.000 0.00 0.00 0.00 4.00
6232 8271 4.504916 CTCCTCCTCCGCACGCAG 62.505 72.222 0.00 0.00 0.00 5.18
6267 8306 3.803162 GCCTCCCCCTCTTGCTCC 61.803 72.222 0.00 0.00 0.00 4.70
6320 8379 4.754114 GCTGAGGCGATAATGAAAAGAGAT 59.246 41.667 0.00 0.00 0.00 2.75
6321 8380 4.122776 GCTGAGGCGATAATGAAAAGAGA 58.877 43.478 0.00 0.00 0.00 3.10
6322 8381 4.025061 CAGCTGAGGCGATAATGAAAAGAG 60.025 45.833 8.42 0.00 44.37 2.85
6323 8382 3.873361 CAGCTGAGGCGATAATGAAAAGA 59.127 43.478 8.42 0.00 44.37 2.52
6324 8383 3.003068 CCAGCTGAGGCGATAATGAAAAG 59.997 47.826 17.39 0.00 44.37 2.27
6325 8384 2.945008 CCAGCTGAGGCGATAATGAAAA 59.055 45.455 17.39 0.00 44.37 2.29
6326 8385 2.564771 CCAGCTGAGGCGATAATGAAA 58.435 47.619 17.39 0.00 44.37 2.69
6336 8395 3.196207 TTGTCCACCCAGCTGAGGC 62.196 63.158 17.39 10.49 39.06 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.