Multiple sequence alignment - TraesCS6D01G027000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G027000 chr6D 100.000 2525 0 0 1 2525 10333587 10331063 0.000000e+00 4663.0
1 TraesCS6D01G027000 chr6D 93.778 225 11 2 2304 2525 392270588 392270364 4.020000e-88 335.0
2 TraesCS6D01G027000 chr6D 88.372 215 22 3 276 488 10338164 10337951 3.220000e-64 255.0
3 TraesCS6D01G027000 chr6A 82.494 1331 106 68 554 1832 11791822 11790567 0.000000e+00 1050.0
4 TraesCS6D01G027000 chr6B 80.898 1403 112 83 889 2215 18936808 18935486 0.000000e+00 963.0
5 TraesCS6D01G027000 chr6B 85.648 216 22 3 2308 2514 695472689 695472474 4.230000e-53 219.0
6 TraesCS6D01G027000 chr5D 96.396 222 8 0 2304 2525 327236198 327235977 1.430000e-97 366.0
7 TraesCS6D01G027000 chr4D 96.347 219 8 0 2307 2525 457069465 457069683 6.640000e-96 361.0
8 TraesCS6D01G027000 chr4D 95.045 222 11 0 2304 2525 387091221 387091000 1.440000e-92 350.0
9 TraesCS6D01G027000 chr3D 95.946 222 9 0 2304 2525 362067639 362067418 6.640000e-96 361.0
10 TraesCS6D01G027000 chr3D 95.045 222 10 1 2304 2525 497498121 497497901 5.170000e-92 348.0
11 TraesCS6D01G027000 chr2D 95.495 222 7 3 2304 2525 511443038 511442820 4.000000e-93 351.0
12 TraesCS6D01G027000 chr2D 94.313 211 12 0 2304 2514 204121779 204121989 8.710000e-85 324.0
13 TraesCS6D01G027000 chr2D 92.444 225 14 3 2304 2525 398462151 398461927 4.050000e-83 318.0
14 TraesCS6D01G027000 chr2D 83.934 305 18 13 2250 2525 143898453 143898151 1.930000e-66 263.0
15 TraesCS6D01G027000 chr2D 97.619 42 1 0 2250 2291 368975646 368975605 3.480000e-09 73.1
16 TraesCS6D01G027000 chr7D 95.067 223 9 2 2304 2525 398062553 398062332 1.440000e-92 350.0
17 TraesCS6D01G027000 chr7D 95.045 222 11 0 2304 2525 565439863 565439642 1.440000e-92 350.0
18 TraesCS6D01G027000 chr7B 86.364 176 20 4 1286 1459 524399834 524400007 3.320000e-44 189.0
19 TraesCS6D01G027000 chr2A 94.444 54 3 0 2250 2303 741416296 741416349 1.610000e-12 84.2
20 TraesCS6D01G027000 chr3A 95.238 42 2 0 2250 2291 486036610 486036569 1.620000e-07 67.6
21 TraesCS6D01G027000 chr3A 95.122 41 2 0 2251 2291 657392189 657392229 5.830000e-07 65.8
22 TraesCS6D01G027000 chr5A 95.122 41 2 0 2250 2290 48965691 48965731 5.830000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G027000 chr6D 10331063 10333587 2524 True 4663 4663 100.000 1 2525 1 chr6D.!!$R1 2524
1 TraesCS6D01G027000 chr6A 11790567 11791822 1255 True 1050 1050 82.494 554 1832 1 chr6A.!!$R1 1278
2 TraesCS6D01G027000 chr6B 18935486 18936808 1322 True 963 963 80.898 889 2215 1 chr6B.!!$R1 1326

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 751 0.108207 GTCGAGGACGGAGGAGGATA 59.892 60.0 0.0 0.0 40.21 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 2547 0.037326 GTGATGAACTGGAGCCGTGA 60.037 55.0 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.861065 AAGTCGGCGACAATTAATATGAAT 57.139 33.333 37.71 12.92 34.60 2.57
24 25 6.467723 AGTCGGCGACAATTAATATGAATC 57.532 37.500 37.71 8.77 34.60 2.52
25 26 5.989168 AGTCGGCGACAATTAATATGAATCA 59.011 36.000 37.71 0.00 34.60 2.57
26 27 6.146184 AGTCGGCGACAATTAATATGAATCAG 59.854 38.462 37.71 0.00 34.60 2.90
27 28 5.082059 CGGCGACAATTAATATGAATCAGC 58.918 41.667 0.00 0.00 0.00 4.26
28 29 5.393962 GGCGACAATTAATATGAATCAGCC 58.606 41.667 0.00 5.54 0.00 4.85
29 30 5.082059 GCGACAATTAATATGAATCAGCCG 58.918 41.667 0.00 0.00 0.00 5.52
30 31 5.621422 CGACAATTAATATGAATCAGCCGG 58.379 41.667 0.00 0.00 0.00 6.13
31 32 5.408299 CGACAATTAATATGAATCAGCCGGA 59.592 40.000 5.05 0.00 0.00 5.14
32 33 6.401474 CGACAATTAATATGAATCAGCCGGAG 60.401 42.308 5.05 0.00 0.00 4.63
33 34 6.299141 ACAATTAATATGAATCAGCCGGAGT 58.701 36.000 5.05 0.00 0.00 3.85
34 35 7.450074 ACAATTAATATGAATCAGCCGGAGTA 58.550 34.615 5.05 0.00 0.00 2.59
35 36 7.387948 ACAATTAATATGAATCAGCCGGAGTAC 59.612 37.037 5.05 0.00 0.00 2.73
36 37 6.665992 TTAATATGAATCAGCCGGAGTACT 57.334 37.500 5.05 0.00 0.00 2.73
37 38 5.552870 AATATGAATCAGCCGGAGTACTT 57.447 39.130 5.05 0.00 0.00 2.24
38 39 6.665992 AATATGAATCAGCCGGAGTACTTA 57.334 37.500 5.05 0.00 0.00 2.24
39 40 6.859112 ATATGAATCAGCCGGAGTACTTAT 57.141 37.500 5.05 0.00 0.00 1.73
40 41 5.552870 ATGAATCAGCCGGAGTACTTATT 57.447 39.130 5.05 0.00 0.00 1.40
41 42 5.353394 TGAATCAGCCGGAGTACTTATTT 57.647 39.130 5.05 0.00 0.00 1.40
42 43 5.741011 TGAATCAGCCGGAGTACTTATTTT 58.259 37.500 5.05 0.00 0.00 1.82
43 44 5.584649 TGAATCAGCCGGAGTACTTATTTTG 59.415 40.000 5.05 0.00 0.00 2.44
44 45 4.546829 TCAGCCGGAGTACTTATTTTGT 57.453 40.909 5.05 0.00 0.00 2.83
45 46 4.901868 TCAGCCGGAGTACTTATTTTGTT 58.098 39.130 5.05 0.00 0.00 2.83
46 47 5.310451 TCAGCCGGAGTACTTATTTTGTTT 58.690 37.500 5.05 0.00 0.00 2.83
47 48 5.766174 TCAGCCGGAGTACTTATTTTGTTTT 59.234 36.000 5.05 0.00 0.00 2.43
48 49 6.072893 TCAGCCGGAGTACTTATTTTGTTTTC 60.073 38.462 5.05 0.00 0.00 2.29
49 50 5.766174 AGCCGGAGTACTTATTTTGTTTTCA 59.234 36.000 5.05 0.00 0.00 2.69
50 51 6.433093 AGCCGGAGTACTTATTTTGTTTTCAT 59.567 34.615 5.05 0.00 0.00 2.57
51 52 7.039993 AGCCGGAGTACTTATTTTGTTTTCATT 60.040 33.333 5.05 0.00 0.00 2.57
52 53 7.597369 GCCGGAGTACTTATTTTGTTTTCATTT 59.403 33.333 5.05 0.00 0.00 2.32
53 54 8.911662 CCGGAGTACTTATTTTGTTTTCATTTG 58.088 33.333 0.00 0.00 0.00 2.32
54 55 8.911662 CGGAGTACTTATTTTGTTTTCATTTGG 58.088 33.333 0.00 0.00 0.00 3.28
55 56 8.708742 GGAGTACTTATTTTGTTTTCATTTGGC 58.291 33.333 0.00 0.00 0.00 4.52
56 57 8.601845 AGTACTTATTTTGTTTTCATTTGGCC 57.398 30.769 0.00 0.00 0.00 5.36
57 58 8.428852 AGTACTTATTTTGTTTTCATTTGGCCT 58.571 29.630 3.32 0.00 0.00 5.19
58 59 9.699703 GTACTTATTTTGTTTTCATTTGGCCTA 57.300 29.630 3.32 0.00 0.00 3.93
60 61 9.791801 ACTTATTTTGTTTTCATTTGGCCTATT 57.208 25.926 3.32 0.00 0.00 1.73
62 63 9.784531 TTATTTTGTTTTCATTTGGCCTATTGA 57.215 25.926 3.32 5.93 0.00 2.57
63 64 8.688747 ATTTTGTTTTCATTTGGCCTATTGAA 57.311 26.923 17.02 17.02 0.00 2.69
64 65 8.511604 TTTTGTTTTCATTTGGCCTATTGAAA 57.488 26.923 24.08 24.08 36.56 2.69
65 66 8.511604 TTTGTTTTCATTTGGCCTATTGAAAA 57.488 26.923 29.54 29.54 42.58 2.29
66 67 8.511604 TTGTTTTCATTTGGCCTATTGAAAAA 57.488 26.923 32.29 24.24 44.83 1.94
245 246 8.879342 AAAACACGAACATATTTGAAATTCCA 57.121 26.923 0.00 0.00 0.00 3.53
246 247 8.879342 AAACACGAACATATTTGAAATTCCAA 57.121 26.923 0.00 0.00 0.00 3.53
247 248 8.879342 AACACGAACATATTTGAAATTCCAAA 57.121 26.923 0.00 0.00 39.93 3.28
248 249 8.293114 ACACGAACATATTTGAAATTCCAAAC 57.707 30.769 0.00 0.00 38.65 2.93
249 250 7.923344 ACACGAACATATTTGAAATTCCAAACA 59.077 29.630 0.00 0.00 38.65 2.83
250 251 8.924691 CACGAACATATTTGAAATTCCAAACAT 58.075 29.630 0.00 0.00 38.65 2.71
251 252 9.487790 ACGAACATATTTGAAATTCCAAACATT 57.512 25.926 0.00 0.00 38.65 2.71
305 306 8.911918 TGTAAGTATGGACTTTTAAAAGCTCA 57.088 30.769 24.60 21.66 43.70 4.26
306 307 8.999431 TGTAAGTATGGACTTTTAAAAGCTCAG 58.001 33.333 24.60 5.18 43.70 3.35
307 308 9.216117 GTAAGTATGGACTTTTAAAAGCTCAGA 57.784 33.333 24.60 17.45 43.70 3.27
308 309 7.674471 AGTATGGACTTTTAAAAGCTCAGAC 57.326 36.000 25.27 25.27 39.63 3.51
309 310 5.613358 ATGGACTTTTAAAAGCTCAGACG 57.387 39.130 24.60 3.32 39.63 4.18
310 311 4.699637 TGGACTTTTAAAAGCTCAGACGA 58.300 39.130 24.60 7.02 39.63 4.20
311 312 5.120399 TGGACTTTTAAAAGCTCAGACGAA 58.880 37.500 24.60 1.46 39.63 3.85
312 313 5.587043 TGGACTTTTAAAAGCTCAGACGAAA 59.413 36.000 24.60 0.86 39.63 3.46
313 314 6.136743 GGACTTTTAAAAGCTCAGACGAAAG 58.863 40.000 24.60 1.01 39.63 2.62
314 315 6.238402 GGACTTTTAAAAGCTCAGACGAAAGT 60.238 38.462 24.60 4.18 43.49 2.66
315 316 7.085052 ACTTTTAAAAGCTCAGACGAAAGTT 57.915 32.000 24.60 0.67 41.76 2.66
316 317 7.535997 ACTTTTAAAAGCTCAGACGAAAGTTT 58.464 30.769 24.60 0.07 41.76 2.66
317 318 8.027189 ACTTTTAAAAGCTCAGACGAAAGTTTT 58.973 29.630 24.60 0.00 41.76 2.43
333 334 9.471084 ACGAAAGTTTTGAAATTCCGAATATTT 57.529 25.926 9.93 0.00 46.40 1.40
338 339 9.771534 AGTTTTGAAATTCCGAATATTTTTGGA 57.228 25.926 0.94 0.94 42.66 3.53
391 392 2.559785 CGAAAGCATGCCAGAACCT 58.440 52.632 15.66 0.00 0.00 3.50
392 393 0.883833 CGAAAGCATGCCAGAACCTT 59.116 50.000 15.66 0.00 0.00 3.50
393 394 1.135575 CGAAAGCATGCCAGAACCTTC 60.136 52.381 15.66 5.38 0.00 3.46
394 395 2.165998 GAAAGCATGCCAGAACCTTCT 58.834 47.619 15.66 0.00 38.25 2.85
395 396 3.347216 GAAAGCATGCCAGAACCTTCTA 58.653 45.455 15.66 0.00 35.34 2.10
396 397 2.706339 AGCATGCCAGAACCTTCTAG 57.294 50.000 15.66 0.00 35.34 2.43
397 398 2.191400 AGCATGCCAGAACCTTCTAGA 58.809 47.619 15.66 0.00 35.34 2.43
398 399 2.573462 AGCATGCCAGAACCTTCTAGAA 59.427 45.455 15.66 4.81 35.34 2.10
399 400 3.201708 AGCATGCCAGAACCTTCTAGAAT 59.798 43.478 15.66 0.00 35.34 2.40
400 401 3.314635 GCATGCCAGAACCTTCTAGAATG 59.685 47.826 6.36 5.89 35.34 2.67
401 402 4.521146 CATGCCAGAACCTTCTAGAATGT 58.479 43.478 5.44 6.61 35.34 2.71
402 403 4.640771 TGCCAGAACCTTCTAGAATGTT 57.359 40.909 21.61 21.61 35.34 2.71
403 404 4.985538 TGCCAGAACCTTCTAGAATGTTT 58.014 39.130 22.13 12.38 35.34 2.83
404 405 6.121776 TGCCAGAACCTTCTAGAATGTTTA 57.878 37.500 22.13 8.56 35.34 2.01
405 406 6.721318 TGCCAGAACCTTCTAGAATGTTTAT 58.279 36.000 22.13 13.91 35.34 1.40
406 407 7.857456 TGCCAGAACCTTCTAGAATGTTTATA 58.143 34.615 22.13 9.08 35.34 0.98
407 408 8.325787 TGCCAGAACCTTCTAGAATGTTTATAA 58.674 33.333 22.13 9.11 35.34 0.98
408 409 9.343539 GCCAGAACCTTCTAGAATGTTTATAAT 57.656 33.333 22.13 4.38 35.34 1.28
434 435 6.558771 AATAAGTAAAACCCGTACACAACC 57.441 37.500 0.00 0.00 0.00 3.77
435 436 3.843893 AGTAAAACCCGTACACAACCT 57.156 42.857 0.00 0.00 0.00 3.50
436 437 4.155063 AGTAAAACCCGTACACAACCTT 57.845 40.909 0.00 0.00 0.00 3.50
437 438 4.525996 AGTAAAACCCGTACACAACCTTT 58.474 39.130 0.00 0.00 0.00 3.11
438 439 4.576053 AGTAAAACCCGTACACAACCTTTC 59.424 41.667 0.00 0.00 0.00 2.62
439 440 1.585297 AACCCGTACACAACCTTTCG 58.415 50.000 0.00 0.00 0.00 3.46
440 441 0.249996 ACCCGTACACAACCTTTCGG 60.250 55.000 0.00 0.00 38.05 4.30
442 443 1.000731 CCCGTACACAACCTTTCGGTA 59.999 52.381 0.00 0.00 44.73 4.02
443 444 2.331194 CCGTACACAACCTTTCGGTAG 58.669 52.381 0.00 0.00 44.73 3.18
444 445 2.331194 CGTACACAACCTTTCGGTAGG 58.669 52.381 0.00 2.64 44.73 3.18
450 451 2.359088 ACCTTTCGGTAGGTTCGCT 58.641 52.632 3.85 0.00 46.39 4.93
451 452 0.245813 ACCTTTCGGTAGGTTCGCTC 59.754 55.000 3.85 0.00 46.39 5.03
452 453 0.245539 CCTTTCGGTAGGTTCGCTCA 59.754 55.000 0.00 0.00 0.00 4.26
453 454 1.630148 CTTTCGGTAGGTTCGCTCAG 58.370 55.000 0.00 0.00 0.00 3.35
454 455 0.963962 TTTCGGTAGGTTCGCTCAGT 59.036 50.000 0.00 0.00 0.00 3.41
455 456 0.242825 TTCGGTAGGTTCGCTCAGTG 59.757 55.000 0.00 0.00 0.00 3.66
456 457 1.153823 CGGTAGGTTCGCTCAGTGG 60.154 63.158 0.00 0.00 0.00 4.00
457 458 1.448013 GGTAGGTTCGCTCAGTGGC 60.448 63.158 0.00 0.00 0.00 5.01
458 459 1.592223 GTAGGTTCGCTCAGTGGCT 59.408 57.895 0.00 0.00 0.00 4.75
459 460 0.737715 GTAGGTTCGCTCAGTGGCTG 60.738 60.000 0.00 0.00 0.00 4.85
460 461 2.507110 TAGGTTCGCTCAGTGGCTGC 62.507 60.000 0.00 0.00 0.00 5.25
461 462 2.358003 GTTCGCTCAGTGGCTGCT 60.358 61.111 0.00 0.00 0.00 4.24
462 463 1.963338 GTTCGCTCAGTGGCTGCTT 60.963 57.895 0.00 0.00 0.00 3.91
463 464 1.227943 TTCGCTCAGTGGCTGCTTT 60.228 52.632 0.00 0.00 0.00 3.51
464 465 1.509644 TTCGCTCAGTGGCTGCTTTG 61.510 55.000 0.00 0.00 0.00 2.77
465 466 2.256591 CGCTCAGTGGCTGCTTTGT 61.257 57.895 0.00 0.00 0.00 2.83
466 467 1.285023 GCTCAGTGGCTGCTTTGTG 59.715 57.895 0.00 0.00 0.00 3.33
467 468 1.285023 CTCAGTGGCTGCTTTGTGC 59.715 57.895 0.00 0.00 43.25 4.57
468 469 2.050714 CAGTGGCTGCTTTGTGCG 60.051 61.111 0.00 0.00 46.63 5.34
469 470 2.203195 AGTGGCTGCTTTGTGCGA 60.203 55.556 0.00 0.00 46.63 5.10
470 471 1.823470 AGTGGCTGCTTTGTGCGAA 60.823 52.632 0.00 0.00 46.63 4.70
471 472 1.370900 GTGGCTGCTTTGTGCGAAG 60.371 57.895 0.00 0.00 46.63 3.79
495 496 3.625897 CCATGCCCCTATCCGCGA 61.626 66.667 8.23 0.00 0.00 5.87
496 497 2.357517 CATGCCCCTATCCGCGAC 60.358 66.667 8.23 0.00 0.00 5.19
497 498 3.991051 ATGCCCCTATCCGCGACG 61.991 66.667 8.23 0.00 0.00 5.12
499 500 3.681835 GCCCCTATCCGCGACGAT 61.682 66.667 8.23 5.21 0.00 3.73
500 501 3.048602 CCCCTATCCGCGACGATT 58.951 61.111 8.23 0.00 0.00 3.34
501 502 1.080705 CCCCTATCCGCGACGATTC 60.081 63.158 8.23 0.00 0.00 2.52
513 514 1.123217 CGACGATTCGCTGATGTATGC 59.877 52.381 5.86 0.00 38.71 3.14
514 515 2.398498 GACGATTCGCTGATGTATGCT 58.602 47.619 5.86 0.00 0.00 3.79
515 516 2.797156 GACGATTCGCTGATGTATGCTT 59.203 45.455 5.86 0.00 0.00 3.91
516 517 3.198068 ACGATTCGCTGATGTATGCTTT 58.802 40.909 5.86 0.00 0.00 3.51
517 518 3.623060 ACGATTCGCTGATGTATGCTTTT 59.377 39.130 5.86 0.00 0.00 2.27
518 519 4.094887 ACGATTCGCTGATGTATGCTTTTT 59.905 37.500 5.86 0.00 0.00 1.94
519 520 4.667948 CGATTCGCTGATGTATGCTTTTTC 59.332 41.667 0.00 0.00 0.00 2.29
520 521 5.503031 CGATTCGCTGATGTATGCTTTTTCT 60.503 40.000 0.00 0.00 0.00 2.52
521 522 5.627499 TTCGCTGATGTATGCTTTTTCTT 57.373 34.783 0.00 0.00 0.00 2.52
522 523 4.973396 TCGCTGATGTATGCTTTTTCTTG 58.027 39.130 0.00 0.00 0.00 3.02
523 524 3.545078 CGCTGATGTATGCTTTTTCTTGC 59.455 43.478 0.00 0.00 0.00 4.01
524 525 3.545078 GCTGATGTATGCTTTTTCTTGCG 59.455 43.478 0.00 0.00 0.00 4.85
525 526 4.095410 TGATGTATGCTTTTTCTTGCGG 57.905 40.909 0.00 0.00 0.00 5.69
526 527 3.119531 TGATGTATGCTTTTTCTTGCGGG 60.120 43.478 0.00 0.00 0.00 6.13
527 528 1.543802 TGTATGCTTTTTCTTGCGGGG 59.456 47.619 0.00 0.00 0.00 5.73
528 529 1.135112 GTATGCTTTTTCTTGCGGGGG 60.135 52.381 0.00 0.00 0.00 5.40
529 530 0.541764 ATGCTTTTTCTTGCGGGGGA 60.542 50.000 0.00 0.00 0.00 4.81
530 531 1.289066 GCTTTTTCTTGCGGGGGAC 59.711 57.895 0.00 0.00 0.00 4.46
531 532 1.460273 GCTTTTTCTTGCGGGGGACA 61.460 55.000 0.00 0.00 0.00 4.02
532 533 1.036707 CTTTTTCTTGCGGGGGACAA 58.963 50.000 0.00 0.00 0.00 3.18
533 534 1.618343 CTTTTTCTTGCGGGGGACAAT 59.382 47.619 0.00 0.00 0.00 2.71
534 535 0.965439 TTTTCTTGCGGGGGACAATG 59.035 50.000 0.00 0.00 0.00 2.82
535 536 0.111446 TTTCTTGCGGGGGACAATGA 59.889 50.000 0.00 0.00 0.00 2.57
536 537 0.331278 TTCTTGCGGGGGACAATGAT 59.669 50.000 0.00 0.00 0.00 2.45
537 538 0.394216 TCTTGCGGGGGACAATGATG 60.394 55.000 0.00 0.00 0.00 3.07
538 539 0.680921 CTTGCGGGGGACAATGATGT 60.681 55.000 0.00 0.00 44.25 3.06
539 540 0.621082 TTGCGGGGGACAATGATGTA 59.379 50.000 0.00 0.00 40.74 2.29
540 541 0.843309 TGCGGGGGACAATGATGTAT 59.157 50.000 0.00 0.00 40.74 2.29
541 542 1.238439 GCGGGGGACAATGATGTATG 58.762 55.000 0.00 0.00 40.74 2.39
542 543 1.476833 GCGGGGGACAATGATGTATGT 60.477 52.381 0.00 0.00 40.74 2.29
543 544 2.930950 CGGGGGACAATGATGTATGTT 58.069 47.619 0.00 0.00 40.74 2.71
544 545 3.287222 CGGGGGACAATGATGTATGTTT 58.713 45.455 0.00 0.00 40.74 2.83
545 546 3.699038 CGGGGGACAATGATGTATGTTTT 59.301 43.478 0.00 0.00 40.74 2.43
546 547 4.159506 CGGGGGACAATGATGTATGTTTTT 59.840 41.667 0.00 0.00 40.74 1.94
547 548 5.418676 GGGGGACAATGATGTATGTTTTTG 58.581 41.667 0.00 0.00 40.74 2.44
548 549 5.186797 GGGGGACAATGATGTATGTTTTTGA 59.813 40.000 0.00 0.00 40.74 2.69
549 550 6.099341 GGGGACAATGATGTATGTTTTTGAC 58.901 40.000 0.00 0.00 40.74 3.18
550 551 6.099341 GGGACAATGATGTATGTTTTTGACC 58.901 40.000 0.00 0.00 40.74 4.02
551 552 6.295011 GGGACAATGATGTATGTTTTTGACCA 60.295 38.462 0.00 0.00 40.74 4.02
552 553 6.808212 GGACAATGATGTATGTTTTTGACCAG 59.192 38.462 0.00 0.00 40.74 4.00
558 559 5.330455 TGTATGTTTTTGACCAGCAAACA 57.670 34.783 10.19 10.19 45.64 2.83
573 574 2.285544 GCAAACACGTGATTTTGTTGCC 60.286 45.455 25.01 6.86 36.08 4.52
575 576 0.593773 ACACGTGATTTTGTTGCCGC 60.594 50.000 25.01 0.00 0.00 6.53
578 579 1.007849 GTGATTTTGTTGCCGCGGT 60.008 52.632 28.70 3.00 0.00 5.68
579 580 1.001745 GTGATTTTGTTGCCGCGGTC 61.002 55.000 28.70 19.46 0.00 4.79
580 581 1.284408 GATTTTGTTGCCGCGGTCA 59.716 52.632 28.70 21.98 0.00 4.02
581 582 1.001745 GATTTTGTTGCCGCGGTCAC 61.002 55.000 28.70 22.98 0.00 3.67
582 583 1.729470 ATTTTGTTGCCGCGGTCACA 61.729 50.000 28.70 25.33 0.00 3.58
583 584 1.729470 TTTTGTTGCCGCGGTCACAT 61.729 50.000 28.70 0.00 0.00 3.21
584 585 2.123988 TTTGTTGCCGCGGTCACATC 62.124 55.000 28.70 15.35 0.00 3.06
585 586 2.742372 GTTGCCGCGGTCACATCT 60.742 61.111 28.70 0.00 0.00 2.90
601 602 7.268586 GGTCACATCTCACATGTAAGTAAGAT 58.731 38.462 0.00 0.00 0.00 2.40
606 607 7.864882 ACATCTCACATGTAAGTAAGATCATCG 59.135 37.037 0.00 0.00 0.00 3.84
610 611 6.321435 TCACATGTAAGTAAGATCATCGTCCT 59.679 38.462 0.00 0.00 0.00 3.85
611 612 6.638873 CACATGTAAGTAAGATCATCGTCCTC 59.361 42.308 0.00 0.00 0.00 3.71
614 615 4.822036 AAGTAAGATCATCGTCCTCTCG 57.178 45.455 0.00 0.00 0.00 4.04
616 617 4.200874 AGTAAGATCATCGTCCTCTCGTT 58.799 43.478 0.00 0.00 0.00 3.85
617 618 3.428746 AAGATCATCGTCCTCTCGTTG 57.571 47.619 0.00 0.00 33.55 4.10
618 619 1.066303 AGATCATCGTCCTCTCGTTGC 59.934 52.381 0.00 0.00 32.70 4.17
619 620 0.248661 ATCATCGTCCTCTCGTTGCG 60.249 55.000 0.00 0.00 32.70 4.85
621 622 1.134530 CATCGTCCTCTCGTTGCGTC 61.135 60.000 0.00 0.00 0.00 5.19
629 638 4.021631 TCGTTGCGTCGAGAGCGT 62.022 61.111 0.00 0.00 38.98 5.07
643 652 3.081133 GCGTGATACGGTGTGCTG 58.919 61.111 3.41 0.00 42.82 4.41
646 655 0.389296 CGTGATACGGTGTGCTGGAA 60.389 55.000 0.00 0.00 38.08 3.53
661 670 1.036481 TGGAAAACAGCAGCACAGCA 61.036 50.000 0.00 0.00 36.85 4.41
675 684 3.450115 AGCAGGTCCCGACGCTAC 61.450 66.667 0.00 0.00 31.60 3.58
691 700 0.821517 CTACGTACACCCCATGCTCA 59.178 55.000 0.00 0.00 0.00 4.26
702 711 3.469970 ATGCTCATCGTGCCGGGA 61.470 61.111 2.18 0.00 0.00 5.14
718 734 1.448013 GGACAAGCACTAGCCGGTC 60.448 63.158 1.90 0.00 43.56 4.79
732 748 2.829458 GGTCGAGGACGGAGGAGG 60.829 72.222 0.00 0.00 40.21 4.30
735 751 0.108207 GTCGAGGACGGAGGAGGATA 59.892 60.000 0.00 0.00 40.21 2.59
751 767 2.324014 GATAGGGGCATGGCACGTCA 62.324 60.000 22.06 8.77 30.83 4.35
771 787 3.547513 CTCCCGACCCCCGAATCC 61.548 72.222 0.00 0.00 41.76 3.01
772 788 4.401876 TCCCGACCCCCGAATCCA 62.402 66.667 0.00 0.00 41.76 3.41
773 789 3.168528 CCCGACCCCCGAATCCAT 61.169 66.667 0.00 0.00 41.76 3.41
775 791 2.426023 CGACCCCCGAATCCATCC 59.574 66.667 0.00 0.00 41.76 3.51
776 792 2.439960 CGACCCCCGAATCCATCCA 61.440 63.158 0.00 0.00 41.76 3.41
777 793 1.768684 CGACCCCCGAATCCATCCAT 61.769 60.000 0.00 0.00 41.76 3.41
785 834 2.303890 CCGAATCCATCCATCCATCTCA 59.696 50.000 0.00 0.00 0.00 3.27
815 864 2.824936 ACCACGGCAATCAATCAATCAA 59.175 40.909 0.00 0.00 0.00 2.57
816 865 3.448301 ACCACGGCAATCAATCAATCAAT 59.552 39.130 0.00 0.00 0.00 2.57
817 866 4.046462 CCACGGCAATCAATCAATCAATC 58.954 43.478 0.00 0.00 0.00 2.67
818 867 4.440387 CCACGGCAATCAATCAATCAATCA 60.440 41.667 0.00 0.00 0.00 2.57
819 868 5.103687 CACGGCAATCAATCAATCAATCAA 58.896 37.500 0.00 0.00 0.00 2.57
840 889 1.606889 AGTCGACCTCCACTCCACC 60.607 63.158 13.01 0.00 0.00 4.61
841 890 2.283676 TCGACCTCCACTCCACCC 60.284 66.667 0.00 0.00 0.00 4.61
842 891 3.391382 CGACCTCCACTCCACCCC 61.391 72.222 0.00 0.00 0.00 4.95
843 892 2.203938 GACCTCCACTCCACCCCA 60.204 66.667 0.00 0.00 0.00 4.96
844 893 2.529389 ACCTCCACTCCACCCCAC 60.529 66.667 0.00 0.00 0.00 4.61
854 903 3.252284 CACCCCACTCCACCAGCT 61.252 66.667 0.00 0.00 0.00 4.24
868 917 1.889829 ACCAGCTAGTCACTCACTCAC 59.110 52.381 0.00 0.00 36.43 3.51
869 918 2.166829 CCAGCTAGTCACTCACTCACT 58.833 52.381 0.00 0.00 36.43 3.41
870 919 2.163412 CCAGCTAGTCACTCACTCACTC 59.837 54.545 0.00 0.00 36.43 3.51
871 920 2.080693 AGCTAGTCACTCACTCACTCG 58.919 52.381 0.00 0.00 36.43 4.18
872 921 1.131504 GCTAGTCACTCACTCACTCGG 59.868 57.143 0.00 0.00 36.43 4.63
873 922 1.131504 CTAGTCACTCACTCACTCGGC 59.868 57.143 0.00 0.00 36.43 5.54
874 923 0.538516 AGTCACTCACTCACTCGGCT 60.539 55.000 0.00 0.00 0.00 5.52
875 924 0.387878 GTCACTCACTCACTCGGCTG 60.388 60.000 0.00 0.00 0.00 4.85
876 925 1.735920 CACTCACTCACTCGGCTGC 60.736 63.158 0.00 0.00 0.00 5.25
877 926 2.203082 ACTCACTCACTCGGCTGCA 61.203 57.895 0.50 0.00 0.00 4.41
878 927 1.735920 CTCACTCACTCGGCTGCAC 60.736 63.158 0.50 0.00 0.00 4.57
879 928 2.740055 CACTCACTCGGCTGCACC 60.740 66.667 0.50 0.00 0.00 5.01
880 929 3.233980 ACTCACTCGGCTGCACCA 61.234 61.111 0.50 0.00 39.03 4.17
881 930 2.433838 CTCACTCGGCTGCACCAG 60.434 66.667 0.50 0.00 39.03 4.00
1125 1202 2.031616 ATGGCCATCATCCTCGCG 59.968 61.111 14.09 0.00 0.00 5.87
1574 1651 3.024043 GTTGTGTTGGCAAGCGCG 61.024 61.111 0.00 0.00 39.92 6.86
1601 1688 0.323725 TGGCTCCCTTTGGATTGCTC 60.324 55.000 0.00 0.00 40.80 4.26
1657 1749 2.195096 TGTTCCGCGTGTAAATATCCG 58.805 47.619 4.92 0.00 0.00 4.18
1676 1768 1.470979 CGTCGAGTTCGGGATTTGGAT 60.471 52.381 1.26 0.00 40.29 3.41
1686 1784 3.821600 TCGGGATTTGGATTTTCGAAACA 59.178 39.130 10.79 2.60 27.18 2.83
1703 1801 2.664402 ACAGGCTCCATCTTTGTGTT 57.336 45.000 0.00 0.00 0.00 3.32
1704 1802 3.788227 ACAGGCTCCATCTTTGTGTTA 57.212 42.857 0.00 0.00 0.00 2.41
1710 1808 7.094205 ACAGGCTCCATCTTTGTGTTAATTTAG 60.094 37.037 0.00 0.00 0.00 1.85
1712 1810 7.029563 GGCTCCATCTTTGTGTTAATTTAGTG 58.970 38.462 0.00 0.00 0.00 2.74
1713 1811 6.528072 GCTCCATCTTTGTGTTAATTTAGTGC 59.472 38.462 0.00 0.00 0.00 4.40
1716 1814 7.029563 CCATCTTTGTGTTAATTTAGTGCTCC 58.970 38.462 0.00 0.00 0.00 4.70
1728 1838 2.795291 AGTGCTCCATATACTCCCCA 57.205 50.000 0.00 0.00 0.00 4.96
1729 1839 2.614259 AGTGCTCCATATACTCCCCAG 58.386 52.381 0.00 0.00 0.00 4.45
1744 1854 4.018324 ACTCCCCAGGTCTTTCTTTTATCC 60.018 45.833 0.00 0.00 0.00 2.59
1753 1863 3.055963 TCTTTCTTTTATCCACGGCCGTA 60.056 43.478 33.70 18.34 0.00 4.02
1768 1878 1.638467 CGTATTTGGCAGCTCGCTC 59.362 57.895 7.85 0.65 41.91 5.03
1769 1879 1.766143 CGTATTTGGCAGCTCGCTCC 61.766 60.000 7.85 0.00 41.91 4.70
1770 1880 1.153168 TATTTGGCAGCTCGCTCCC 60.153 57.895 7.85 0.00 41.91 4.30
1771 1881 1.909459 TATTTGGCAGCTCGCTCCCA 61.909 55.000 0.00 0.00 41.91 4.37
1772 1882 4.704833 TTGGCAGCTCGCTCCCAC 62.705 66.667 0.00 0.00 32.84 4.61
1774 1884 4.828925 GGCAGCTCGCTCCCACTC 62.829 72.222 7.85 0.00 41.91 3.51
1775 1885 4.074526 GCAGCTCGCTCCCACTCA 62.075 66.667 1.48 0.00 37.77 3.41
1776 1886 2.125753 CAGCTCGCTCCCACTCAC 60.126 66.667 0.00 0.00 0.00 3.51
1777 1887 2.601666 AGCTCGCTCCCACTCACA 60.602 61.111 0.00 0.00 0.00 3.58
1778 1888 2.433318 GCTCGCTCCCACTCACAC 60.433 66.667 0.00 0.00 0.00 3.82
1779 1889 2.936912 GCTCGCTCCCACTCACACT 61.937 63.158 0.00 0.00 0.00 3.55
1797 1915 2.624838 CACTCACTGACAAGGCCAAATT 59.375 45.455 5.01 0.00 0.00 1.82
1823 1947 1.195448 CACCAAGAACTTGCACTAGCG 59.805 52.381 8.81 0.00 46.23 4.26
1846 1992 6.292381 GCGCTATCTGATAATCTCGTTTGTTT 60.292 38.462 0.00 0.00 0.00 2.83
1852 1998 9.778993 ATCTGATAATCTCGTTTGTTTGATTTG 57.221 29.630 0.00 0.00 32.33 2.32
1853 1999 8.236586 TCTGATAATCTCGTTTGTTTGATTTGG 58.763 33.333 0.00 0.00 32.33 3.28
1854 2000 7.881142 TGATAATCTCGTTTGTTTGATTTGGT 58.119 30.769 0.00 0.00 32.33 3.67
1855 2001 8.356657 TGATAATCTCGTTTGTTTGATTTGGTT 58.643 29.630 0.00 0.00 32.33 3.67
1856 2002 9.191995 GATAATCTCGTTTGTTTGATTTGGTTT 57.808 29.630 0.00 0.00 32.33 3.27
1857 2003 7.841915 AATCTCGTTTGTTTGATTTGGTTTT 57.158 28.000 0.00 0.00 0.00 2.43
1858 2004 8.934507 AATCTCGTTTGTTTGATTTGGTTTTA 57.065 26.923 0.00 0.00 0.00 1.52
1914 2065 3.876589 TTGGTCTGCGAAGACGGGC 62.877 63.158 17.46 4.43 39.57 6.13
1937 2088 0.983905 TAAGGGTAGGCCGCCATTCA 60.984 55.000 19.65 7.06 31.98 2.57
1952 2103 3.306225 GCCATTCATTCTGCTTCAACCAA 60.306 43.478 0.00 0.00 0.00 3.67
1953 2104 4.491676 CCATTCATTCTGCTTCAACCAAG 58.508 43.478 0.00 0.00 34.85 3.61
1954 2105 4.021719 CCATTCATTCTGCTTCAACCAAGT 60.022 41.667 0.00 0.00 34.13 3.16
1966 2117 0.673644 AACCAAGTCGAGCCAATCCG 60.674 55.000 0.00 0.00 0.00 4.18
1972 2131 0.179084 GTCGAGCCAATCCGATCCAA 60.179 55.000 0.00 0.00 37.14 3.53
1992 2151 2.645567 CGCTCGGATATGGCTCGT 59.354 61.111 0.00 0.00 0.00 4.18
2015 2174 2.574929 TGCCGTCGTGGGATACAC 59.425 61.111 0.00 0.00 46.78 2.90
2024 2183 2.402640 GTGGGATACACGATCGAGTC 57.597 55.000 24.34 8.96 40.85 3.36
2025 2184 1.001597 GTGGGATACACGATCGAGTCC 60.002 57.143 24.34 17.49 40.85 3.85
2026 2185 1.133884 TGGGATACACGATCGAGTCCT 60.134 52.381 24.34 11.13 35.12 3.85
2027 2186 1.955080 GGGATACACGATCGAGTCCTT 59.045 52.381 24.34 8.69 35.12 3.36
2028 2187 2.287668 GGGATACACGATCGAGTCCTTG 60.288 54.545 24.34 10.95 35.12 3.61
2029 2188 2.386249 GATACACGATCGAGTCCTTGC 58.614 52.381 24.34 4.93 0.00 4.01
2030 2189 1.460504 TACACGATCGAGTCCTTGCT 58.539 50.000 24.34 0.00 0.00 3.91
2031 2190 0.109086 ACACGATCGAGTCCTTGCTG 60.109 55.000 24.34 8.60 0.00 4.41
2032 2191 0.803768 CACGATCGAGTCCTTGCTGG 60.804 60.000 24.34 0.00 37.10 4.85
2033 2192 0.965866 ACGATCGAGTCCTTGCTGGA 60.966 55.000 24.34 0.00 43.86 3.86
2047 2206 2.606213 TGGACCCTCACGCCATGA 60.606 61.111 0.00 0.00 35.45 3.07
2123 2286 1.002366 CGATCAACCGAGCCTTCTTG 58.998 55.000 0.00 0.00 0.00 3.02
2153 2316 0.398318 AGAAGTGTGGTGAAGCTCCC 59.602 55.000 0.00 0.00 0.00 4.30
2156 2319 1.374758 GTGTGGTGAAGCTCCCTCG 60.375 63.158 0.00 0.00 0.00 4.63
2161 2324 2.683933 TGAAGCTCCCTCGGTCCC 60.684 66.667 0.00 0.00 0.00 4.46
2166 2329 2.283809 CTCCCTCGGTCCCTCCAT 59.716 66.667 0.00 0.00 35.57 3.41
2167 2330 1.834822 CTCCCTCGGTCCCTCCATC 60.835 68.421 0.00 0.00 35.57 3.51
2168 2331 2.844839 CCCTCGGTCCCTCCATCC 60.845 72.222 0.00 0.00 35.57 3.51
2169 2332 3.227276 CCTCGGTCCCTCCATCCG 61.227 72.222 0.00 0.00 44.76 4.18
2170 2333 3.227276 CTCGGTCCCTCCATCCGG 61.227 72.222 0.00 0.00 43.75 5.14
2171 2334 3.733507 CTCGGTCCCTCCATCCGGA 62.734 68.421 6.61 6.61 43.75 5.14
2172 2335 3.537874 CGGTCCCTCCATCCGGAC 61.538 72.222 6.12 0.00 46.63 4.79
2184 2347 3.450115 CCGGACGGAGACCAGACC 61.450 72.222 4.40 0.00 44.03 3.85
2208 2371 2.370849 ACCACGTGAAGGTTGGTTCTAT 59.629 45.455 19.30 0.00 35.33 1.98
2215 2378 3.322541 TGAAGGTTGGTTCTATCGTGTCA 59.677 43.478 0.00 0.00 0.00 3.58
2216 2379 3.594603 AGGTTGGTTCTATCGTGTCAG 57.405 47.619 0.00 0.00 0.00 3.51
2217 2380 2.233922 AGGTTGGTTCTATCGTGTCAGG 59.766 50.000 0.00 0.00 0.00 3.86
2218 2381 2.028385 GGTTGGTTCTATCGTGTCAGGT 60.028 50.000 0.00 0.00 0.00 4.00
2219 2382 2.993899 GTTGGTTCTATCGTGTCAGGTG 59.006 50.000 0.00 0.00 0.00 4.00
2220 2383 2.244695 TGGTTCTATCGTGTCAGGTGT 58.755 47.619 0.00 0.00 0.00 4.16
2221 2384 2.631062 TGGTTCTATCGTGTCAGGTGTT 59.369 45.455 0.00 0.00 0.00 3.32
2222 2385 3.827876 TGGTTCTATCGTGTCAGGTGTTA 59.172 43.478 0.00 0.00 0.00 2.41
2223 2386 4.082408 TGGTTCTATCGTGTCAGGTGTTAG 60.082 45.833 0.00 0.00 0.00 2.34
2224 2387 3.777465 TCTATCGTGTCAGGTGTTAGC 57.223 47.619 0.00 0.00 0.00 3.09
2225 2388 2.426024 TCTATCGTGTCAGGTGTTAGCC 59.574 50.000 0.00 0.00 0.00 3.93
2226 2389 0.249398 ATCGTGTCAGGTGTTAGCCC 59.751 55.000 0.00 0.00 0.00 5.19
2227 2390 0.830444 TCGTGTCAGGTGTTAGCCCT 60.830 55.000 0.00 0.00 0.00 5.19
2228 2391 0.892755 CGTGTCAGGTGTTAGCCCTA 59.107 55.000 0.00 0.00 0.00 3.53
2229 2392 1.403780 CGTGTCAGGTGTTAGCCCTAC 60.404 57.143 0.00 0.00 0.00 3.18
2230 2393 1.900486 GTGTCAGGTGTTAGCCCTACT 59.100 52.381 0.00 0.00 0.00 2.57
2231 2394 2.094130 GTGTCAGGTGTTAGCCCTACTC 60.094 54.545 0.00 0.00 0.00 2.59
2232 2395 1.481363 GTCAGGTGTTAGCCCTACTCC 59.519 57.143 0.00 0.00 0.00 3.85
2233 2396 1.078159 TCAGGTGTTAGCCCTACTCCA 59.922 52.381 0.00 0.00 32.84 3.86
2234 2397 1.207329 CAGGTGTTAGCCCTACTCCAC 59.793 57.143 0.00 0.00 32.84 4.02
2235 2398 0.540454 GGTGTTAGCCCTACTCCACC 59.460 60.000 0.00 0.00 41.01 4.61
2236 2399 0.175073 GTGTTAGCCCTACTCCACCG 59.825 60.000 0.00 0.00 0.00 4.94
2237 2400 1.143401 GTTAGCCCTACTCCACCGC 59.857 63.158 0.00 0.00 0.00 5.68
2238 2401 2.062177 TTAGCCCTACTCCACCGCC 61.062 63.158 0.00 0.00 0.00 6.13
2242 2405 3.834799 CCTACTCCACCGCCCGAC 61.835 72.222 0.00 0.00 0.00 4.79
2243 2406 3.834799 CTACTCCACCGCCCGACC 61.835 72.222 0.00 0.00 0.00 4.79
2249 2412 4.733542 CACCGCCCGACCCCAAAT 62.734 66.667 0.00 0.00 0.00 2.32
2250 2413 4.419921 ACCGCCCGACCCCAAATC 62.420 66.667 0.00 0.00 0.00 2.17
2254 2417 3.404438 CCCGACCCCAAATCCGGA 61.404 66.667 6.61 6.61 44.29 5.14
2255 2418 2.752807 CCCGACCCCAAATCCGGAT 61.753 63.158 12.38 12.38 44.29 4.18
2256 2419 1.226262 CCGACCCCAAATCCGGATT 59.774 57.895 24.27 24.27 44.29 3.01
2257 2420 0.818040 CCGACCCCAAATCCGGATTC 60.818 60.000 29.32 15.15 44.29 2.52
2258 2421 0.180406 CGACCCCAAATCCGGATTCT 59.820 55.000 29.32 16.53 0.00 2.40
2259 2422 1.680338 GACCCCAAATCCGGATTCTG 58.320 55.000 29.32 25.01 0.00 3.02
2260 2423 0.999712 ACCCCAAATCCGGATTCTGT 59.000 50.000 29.32 19.50 0.00 3.41
2261 2424 1.064685 ACCCCAAATCCGGATTCTGTC 60.065 52.381 29.32 0.00 0.00 3.51
2262 2425 1.680338 CCCAAATCCGGATTCTGTCC 58.320 55.000 29.32 0.00 44.10 4.02
2279 2442 2.902705 TCCGTTTGGATAGGGATTCG 57.097 50.000 0.00 0.00 40.17 3.34
2280 2443 1.414919 TCCGTTTGGATAGGGATTCGG 59.585 52.381 0.00 0.00 40.17 4.30
2281 2444 1.542547 CCGTTTGGATAGGGATTCGGG 60.543 57.143 0.00 0.00 37.49 5.14
2282 2445 1.542547 CGTTTGGATAGGGATTCGGGG 60.543 57.143 0.00 0.00 0.00 5.73
2283 2446 1.493446 GTTTGGATAGGGATTCGGGGT 59.507 52.381 0.00 0.00 0.00 4.95
2284 2447 1.430992 TTGGATAGGGATTCGGGGTC 58.569 55.000 0.00 0.00 0.00 4.46
2285 2448 0.830444 TGGATAGGGATTCGGGGTCG 60.830 60.000 0.00 0.00 37.82 4.79
2286 2449 0.830866 GGATAGGGATTCGGGGTCGT 60.831 60.000 0.00 0.00 37.69 4.34
2287 2450 0.317479 GATAGGGATTCGGGGTCGTG 59.683 60.000 0.00 0.00 37.69 4.35
2288 2451 0.398098 ATAGGGATTCGGGGTCGTGT 60.398 55.000 0.00 0.00 37.69 4.49
2289 2452 1.039233 TAGGGATTCGGGGTCGTGTC 61.039 60.000 0.00 0.00 37.69 3.67
2290 2453 2.186125 GGATTCGGGGTCGTGTCC 59.814 66.667 0.00 0.00 37.69 4.02
2291 2454 2.356780 GGATTCGGGGTCGTGTCCT 61.357 63.158 0.00 0.00 37.71 3.85
2292 2455 1.039233 GGATTCGGGGTCGTGTCCTA 61.039 60.000 0.00 0.00 37.71 2.94
2293 2456 0.384669 GATTCGGGGTCGTGTCCTAG 59.615 60.000 0.00 0.00 37.69 3.02
2294 2457 1.041447 ATTCGGGGTCGTGTCCTAGG 61.041 60.000 0.82 0.82 37.69 3.02
2295 2458 2.044650 CGGGGTCGTGTCCTAGGA 60.045 66.667 7.62 7.62 0.00 2.94
2296 2459 1.455217 CGGGGTCGTGTCCTAGGAT 60.455 63.158 16.27 0.00 0.00 3.24
2297 2460 1.735376 CGGGGTCGTGTCCTAGGATG 61.735 65.000 16.27 8.49 0.00 3.51
2298 2461 1.442148 GGGTCGTGTCCTAGGATGC 59.558 63.158 16.27 9.97 0.00 3.91
2299 2462 1.065928 GGTCGTGTCCTAGGATGCG 59.934 63.158 23.61 23.61 0.00 4.73
2300 2463 1.065928 GTCGTGTCCTAGGATGCGG 59.934 63.158 26.73 14.03 0.00 5.69
2301 2464 1.379443 TCGTGTCCTAGGATGCGGT 60.379 57.895 26.73 0.00 0.00 5.68
2302 2465 1.226974 CGTGTCCTAGGATGCGGTG 60.227 63.158 16.27 0.00 0.00 4.94
2303 2466 1.663379 CGTGTCCTAGGATGCGGTGA 61.663 60.000 16.27 0.00 0.00 4.02
2304 2467 0.103208 GTGTCCTAGGATGCGGTGAG 59.897 60.000 16.27 0.00 0.00 3.51
2329 2492 2.124901 CCGCATCCGTTTGCCCTA 60.125 61.111 1.70 0.00 39.52 3.53
2330 2493 1.525995 CCGCATCCGTTTGCCCTAT 60.526 57.895 1.70 0.00 39.52 2.57
2331 2494 1.507141 CCGCATCCGTTTGCCCTATC 61.507 60.000 1.70 0.00 39.52 2.08
2332 2495 0.813610 CGCATCCGTTTGCCCTATCA 60.814 55.000 1.70 0.00 39.52 2.15
2333 2496 1.609208 GCATCCGTTTGCCCTATCAT 58.391 50.000 0.00 0.00 36.60 2.45
2334 2497 1.267806 GCATCCGTTTGCCCTATCATG 59.732 52.381 0.00 0.00 36.60 3.07
2335 2498 2.575532 CATCCGTTTGCCCTATCATGT 58.424 47.619 0.00 0.00 0.00 3.21
2336 2499 2.325583 TCCGTTTGCCCTATCATGTC 57.674 50.000 0.00 0.00 0.00 3.06
2337 2500 1.134220 TCCGTTTGCCCTATCATGTCC 60.134 52.381 0.00 0.00 0.00 4.02
2338 2501 0.937304 CGTTTGCCCTATCATGTCCG 59.063 55.000 0.00 0.00 0.00 4.79
2339 2502 0.663153 GTTTGCCCTATCATGTCCGC 59.337 55.000 0.00 0.00 0.00 5.54
2340 2503 0.813610 TTTGCCCTATCATGTCCGCG 60.814 55.000 0.00 0.00 0.00 6.46
2341 2504 1.966901 TTGCCCTATCATGTCCGCGT 61.967 55.000 4.92 0.00 0.00 6.01
2342 2505 1.664965 GCCCTATCATGTCCGCGTC 60.665 63.158 4.92 0.00 0.00 5.19
2343 2506 2.041976 CCCTATCATGTCCGCGTCT 58.958 57.895 4.92 0.00 0.00 4.18
2344 2507 1.244816 CCCTATCATGTCCGCGTCTA 58.755 55.000 4.92 0.00 0.00 2.59
2345 2508 1.819288 CCCTATCATGTCCGCGTCTAT 59.181 52.381 4.92 0.00 0.00 1.98
2346 2509 2.231478 CCCTATCATGTCCGCGTCTATT 59.769 50.000 4.92 0.00 0.00 1.73
2347 2510 3.306088 CCCTATCATGTCCGCGTCTATTT 60.306 47.826 4.92 0.00 0.00 1.40
2348 2511 4.082408 CCCTATCATGTCCGCGTCTATTTA 60.082 45.833 4.92 0.00 0.00 1.40
2349 2512 5.466819 CCTATCATGTCCGCGTCTATTTAA 58.533 41.667 4.92 0.00 0.00 1.52
2350 2513 6.100004 CCTATCATGTCCGCGTCTATTTAAT 58.900 40.000 4.92 0.00 0.00 1.40
2351 2514 7.255569 CCTATCATGTCCGCGTCTATTTAATA 58.744 38.462 4.92 0.00 0.00 0.98
2352 2515 7.758076 CCTATCATGTCCGCGTCTATTTAATAA 59.242 37.037 4.92 0.00 0.00 1.40
2353 2516 7.956420 ATCATGTCCGCGTCTATTTAATAAA 57.044 32.000 4.92 0.00 0.00 1.40
2354 2517 7.773864 TCATGTCCGCGTCTATTTAATAAAA 57.226 32.000 4.92 0.00 0.00 1.52
2355 2518 7.847487 TCATGTCCGCGTCTATTTAATAAAAG 58.153 34.615 4.92 0.00 0.00 2.27
2356 2519 7.707464 TCATGTCCGCGTCTATTTAATAAAAGA 59.293 33.333 4.92 0.00 0.00 2.52
2357 2520 7.459394 TGTCCGCGTCTATTTAATAAAAGAG 57.541 36.000 4.92 0.00 35.64 2.85
2358 2521 7.037438 TGTCCGCGTCTATTTAATAAAAGAGT 58.963 34.615 4.92 0.00 35.77 3.24
2359 2522 8.190122 TGTCCGCGTCTATTTAATAAAAGAGTA 58.810 33.333 4.92 0.00 35.77 2.59
2360 2523 9.023967 GTCCGCGTCTATTTAATAAAAGAGTAA 57.976 33.333 4.92 0.00 35.77 2.24
2361 2524 9.023967 TCCGCGTCTATTTAATAAAAGAGTAAC 57.976 33.333 4.92 0.00 35.77 2.50
2362 2525 7.994894 CCGCGTCTATTTAATAAAAGAGTAACG 59.005 37.037 4.92 0.19 37.28 3.18
2363 2526 8.526681 CGCGTCTATTTAATAAAAGAGTAACGT 58.473 33.333 0.00 0.00 36.91 3.99
2373 2536 8.515473 AATAAAAGAGTAACGTTTCAAATGCC 57.485 30.769 5.91 0.00 32.94 4.40
2374 2537 5.767816 AAAGAGTAACGTTTCAAATGCCT 57.232 34.783 5.91 0.00 0.00 4.75
2375 2538 6.870971 AAAGAGTAACGTTTCAAATGCCTA 57.129 33.333 5.91 0.00 0.00 3.93
2376 2539 6.481954 AAGAGTAACGTTTCAAATGCCTAG 57.518 37.500 5.91 0.00 0.00 3.02
2377 2540 4.392138 AGAGTAACGTTTCAAATGCCTAGC 59.608 41.667 5.91 0.00 0.00 3.42
2378 2541 3.439129 AGTAACGTTTCAAATGCCTAGCC 59.561 43.478 5.91 0.00 0.00 3.93
2379 2542 1.173913 ACGTTTCAAATGCCTAGCCC 58.826 50.000 0.00 0.00 0.00 5.19
2380 2543 1.271926 ACGTTTCAAATGCCTAGCCCT 60.272 47.619 0.00 0.00 0.00 5.19
2381 2544 2.026636 ACGTTTCAAATGCCTAGCCCTA 60.027 45.455 0.00 0.00 0.00 3.53
2382 2545 2.614057 CGTTTCAAATGCCTAGCCCTAG 59.386 50.000 0.00 0.00 0.00 3.02
2383 2546 3.621558 GTTTCAAATGCCTAGCCCTAGT 58.378 45.455 1.99 0.00 0.00 2.57
2384 2547 4.017126 GTTTCAAATGCCTAGCCCTAGTT 58.983 43.478 1.99 0.00 0.00 2.24
2385 2548 3.560636 TCAAATGCCTAGCCCTAGTTC 57.439 47.619 1.99 0.00 0.00 3.01
2386 2549 2.843730 TCAAATGCCTAGCCCTAGTTCA 59.156 45.455 1.99 0.62 0.00 3.18
2387 2550 2.945668 CAAATGCCTAGCCCTAGTTCAC 59.054 50.000 1.99 0.00 0.00 3.18
2388 2551 0.753262 ATGCCTAGCCCTAGTTCACG 59.247 55.000 1.99 0.00 0.00 4.35
2389 2552 1.327690 TGCCTAGCCCTAGTTCACGG 61.328 60.000 1.99 0.00 0.00 4.94
2390 2553 1.442148 CCTAGCCCTAGTTCACGGC 59.558 63.158 0.00 0.00 43.35 5.68
2393 2556 2.187163 GCCCTAGTTCACGGCTCC 59.813 66.667 0.12 0.00 39.70 4.70
2394 2557 2.656069 GCCCTAGTTCACGGCTCCA 61.656 63.158 0.12 0.00 39.70 3.86
2395 2558 1.517832 CCCTAGTTCACGGCTCCAG 59.482 63.158 0.00 0.00 0.00 3.86
2396 2559 1.258445 CCCTAGTTCACGGCTCCAGT 61.258 60.000 0.00 0.00 0.00 4.00
2397 2560 0.608640 CCTAGTTCACGGCTCCAGTT 59.391 55.000 0.00 0.00 0.00 3.16
2398 2561 1.404315 CCTAGTTCACGGCTCCAGTTC 60.404 57.143 0.00 0.00 0.00 3.01
2399 2562 1.272490 CTAGTTCACGGCTCCAGTTCA 59.728 52.381 0.00 0.00 0.00 3.18
2400 2563 0.687354 AGTTCACGGCTCCAGTTCAT 59.313 50.000 0.00 0.00 0.00 2.57
2401 2564 1.079503 GTTCACGGCTCCAGTTCATC 58.920 55.000 0.00 0.00 0.00 2.92
2402 2565 0.684535 TTCACGGCTCCAGTTCATCA 59.315 50.000 0.00 0.00 0.00 3.07
2403 2566 0.037326 TCACGGCTCCAGTTCATCAC 60.037 55.000 0.00 0.00 0.00 3.06
2404 2567 1.079819 ACGGCTCCAGTTCATCACG 60.080 57.895 0.00 0.00 0.00 4.35
2405 2568 2.456119 CGGCTCCAGTTCATCACGC 61.456 63.158 0.00 0.00 0.00 5.34
2406 2569 1.078848 GGCTCCAGTTCATCACGCT 60.079 57.895 0.00 0.00 0.00 5.07
2407 2570 1.364626 GGCTCCAGTTCATCACGCTG 61.365 60.000 0.00 0.00 0.00 5.18
2409 2572 1.364626 CTCCAGTTCATCACGCTGGC 61.365 60.000 5.05 0.00 46.82 4.85
2410 2573 1.672030 CCAGTTCATCACGCTGGCA 60.672 57.895 0.00 0.00 42.54 4.92
2411 2574 1.236616 CCAGTTCATCACGCTGGCAA 61.237 55.000 0.00 0.00 42.54 4.52
2412 2575 0.110056 CAGTTCATCACGCTGGCAAC 60.110 55.000 0.00 0.00 0.00 4.17
2434 2597 4.814294 CCAGCGGCCTACACGTCC 62.814 72.222 0.00 0.00 0.00 4.79
2435 2598 4.063967 CAGCGGCCTACACGTCCA 62.064 66.667 0.00 0.00 0.00 4.02
2436 2599 3.075005 AGCGGCCTACACGTCCAT 61.075 61.111 0.00 0.00 0.00 3.41
2437 2600 2.585247 GCGGCCTACACGTCCATC 60.585 66.667 0.00 0.00 0.00 3.51
2438 2601 2.278596 CGGCCTACACGTCCATCG 60.279 66.667 0.00 0.00 46.00 3.84
2439 2602 2.585247 GGCCTACACGTCCATCGC 60.585 66.667 0.00 0.00 44.19 4.58
2440 2603 2.585247 GCCTACACGTCCATCGCC 60.585 66.667 0.00 0.00 44.19 5.54
2441 2604 2.278596 CCTACACGTCCATCGCCG 60.279 66.667 0.00 0.00 44.19 6.46
2442 2605 2.278596 CTACACGTCCATCGCCGG 60.279 66.667 0.00 0.00 44.19 6.13
2443 2606 4.501714 TACACGTCCATCGCCGGC 62.502 66.667 19.07 19.07 44.19 6.13
2446 2609 4.891727 ACGTCCATCGCCGGCATC 62.892 66.667 28.98 8.26 44.19 3.91
2476 2639 3.368571 GCAACACAGCCAGCCTCC 61.369 66.667 0.00 0.00 0.00 4.30
2477 2640 2.113774 CAACACAGCCAGCCTCCA 59.886 61.111 0.00 0.00 0.00 3.86
2478 2641 1.529010 CAACACAGCCAGCCTCCAA 60.529 57.895 0.00 0.00 0.00 3.53
2479 2642 1.108727 CAACACAGCCAGCCTCCAAA 61.109 55.000 0.00 0.00 0.00 3.28
2480 2643 0.396974 AACACAGCCAGCCTCCAAAA 60.397 50.000 0.00 0.00 0.00 2.44
2481 2644 0.178953 ACACAGCCAGCCTCCAAAAT 60.179 50.000 0.00 0.00 0.00 1.82
2482 2645 0.245539 CACAGCCAGCCTCCAAAATG 59.754 55.000 0.00 0.00 0.00 2.32
2483 2646 0.112995 ACAGCCAGCCTCCAAAATGA 59.887 50.000 0.00 0.00 0.00 2.57
2484 2647 1.259609 CAGCCAGCCTCCAAAATGAA 58.740 50.000 0.00 0.00 0.00 2.57
2485 2648 1.829222 CAGCCAGCCTCCAAAATGAAT 59.171 47.619 0.00 0.00 0.00 2.57
2486 2649 3.025978 CAGCCAGCCTCCAAAATGAATA 58.974 45.455 0.00 0.00 0.00 1.75
2487 2650 3.067742 CAGCCAGCCTCCAAAATGAATAG 59.932 47.826 0.00 0.00 0.00 1.73
2488 2651 3.026694 GCCAGCCTCCAAAATGAATAGT 58.973 45.455 0.00 0.00 0.00 2.12
2489 2652 3.448660 GCCAGCCTCCAAAATGAATAGTT 59.551 43.478 0.00 0.00 0.00 2.24
2490 2653 4.678840 GCCAGCCTCCAAAATGAATAGTTG 60.679 45.833 0.00 0.00 0.00 3.16
2491 2654 4.463891 CCAGCCTCCAAAATGAATAGTTGT 59.536 41.667 0.00 0.00 0.00 3.32
2492 2655 5.393461 CCAGCCTCCAAAATGAATAGTTGTC 60.393 44.000 0.00 0.00 0.00 3.18
2493 2656 4.706962 AGCCTCCAAAATGAATAGTTGTCC 59.293 41.667 0.00 0.00 0.00 4.02
2494 2657 4.706962 GCCTCCAAAATGAATAGTTGTCCT 59.293 41.667 0.00 0.00 0.00 3.85
2495 2658 5.163612 GCCTCCAAAATGAATAGTTGTCCTC 60.164 44.000 0.00 0.00 0.00 3.71
2496 2659 5.065218 CCTCCAAAATGAATAGTTGTCCTCG 59.935 44.000 0.00 0.00 0.00 4.63
2497 2660 4.394920 TCCAAAATGAATAGTTGTCCTCGC 59.605 41.667 0.00 0.00 0.00 5.03
2498 2661 4.438744 CCAAAATGAATAGTTGTCCTCGCC 60.439 45.833 0.00 0.00 0.00 5.54
2499 2662 2.225068 ATGAATAGTTGTCCTCGCCG 57.775 50.000 0.00 0.00 0.00 6.46
2500 2663 0.174845 TGAATAGTTGTCCTCGCCGG 59.825 55.000 0.00 0.00 0.00 6.13
2501 2664 1.152383 GAATAGTTGTCCTCGCCGGC 61.152 60.000 19.07 19.07 0.00 6.13
2502 2665 1.895020 AATAGTTGTCCTCGCCGGCA 61.895 55.000 28.98 12.94 0.00 5.69
2503 2666 1.895020 ATAGTTGTCCTCGCCGGCAA 61.895 55.000 28.98 7.25 0.00 4.52
2504 2667 2.775032 TAGTTGTCCTCGCCGGCAAC 62.775 60.000 28.98 21.22 43.78 4.17
2505 2668 4.243008 TTGTCCTCGCCGGCAACA 62.243 61.111 28.98 20.72 0.00 3.33
2506 2669 4.980805 TGTCCTCGCCGGCAACAC 62.981 66.667 28.98 16.94 0.00 3.32
2507 2670 4.980805 GTCCTCGCCGGCAACACA 62.981 66.667 28.98 2.06 0.00 3.72
2508 2671 4.680237 TCCTCGCCGGCAACACAG 62.680 66.667 28.98 12.94 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.481976 TGATTCATATTAATTGTCGCCGACTT 59.518 34.615 19.12 7.86 33.15 3.01
1 2 5.989168 TGATTCATATTAATTGTCGCCGACT 59.011 36.000 19.12 0.27 33.15 4.18
2 3 6.223138 TGATTCATATTAATTGTCGCCGAC 57.777 37.500 10.96 10.96 0.00 4.79
3 4 5.107104 GCTGATTCATATTAATTGTCGCCGA 60.107 40.000 0.00 0.00 0.00 5.54
4 5 5.082059 GCTGATTCATATTAATTGTCGCCG 58.918 41.667 0.00 0.00 0.00 6.46
5 6 5.393962 GGCTGATTCATATTAATTGTCGCC 58.606 41.667 0.00 0.00 0.00 5.54
6 7 5.082059 CGGCTGATTCATATTAATTGTCGC 58.918 41.667 0.00 0.00 0.00 5.19
7 8 5.408299 TCCGGCTGATTCATATTAATTGTCG 59.592 40.000 0.00 4.61 0.00 4.35
8 9 6.428159 ACTCCGGCTGATTCATATTAATTGTC 59.572 38.462 0.00 0.00 0.00 3.18
9 10 6.299141 ACTCCGGCTGATTCATATTAATTGT 58.701 36.000 0.00 0.00 0.00 2.71
10 11 6.808008 ACTCCGGCTGATTCATATTAATTG 57.192 37.500 0.00 0.00 0.00 2.32
11 12 7.680730 AGTACTCCGGCTGATTCATATTAATT 58.319 34.615 0.00 0.00 0.00 1.40
12 13 7.246171 AGTACTCCGGCTGATTCATATTAAT 57.754 36.000 0.00 0.00 0.00 1.40
13 14 6.665992 AGTACTCCGGCTGATTCATATTAA 57.334 37.500 0.00 0.00 0.00 1.40
14 15 6.665992 AAGTACTCCGGCTGATTCATATTA 57.334 37.500 0.00 0.00 0.00 0.98
15 16 5.552870 AAGTACTCCGGCTGATTCATATT 57.447 39.130 0.00 0.00 0.00 1.28
16 17 6.859112 ATAAGTACTCCGGCTGATTCATAT 57.141 37.500 0.00 0.00 0.00 1.78
17 18 6.665992 AATAAGTACTCCGGCTGATTCATA 57.334 37.500 0.00 0.00 0.00 2.15
18 19 5.552870 AATAAGTACTCCGGCTGATTCAT 57.447 39.130 0.00 0.00 0.00 2.57
19 20 5.353394 AAATAAGTACTCCGGCTGATTCA 57.647 39.130 0.00 0.00 0.00 2.57
20 21 5.585047 ACAAAATAAGTACTCCGGCTGATTC 59.415 40.000 0.00 0.00 0.00 2.52
21 22 5.497474 ACAAAATAAGTACTCCGGCTGATT 58.503 37.500 0.00 0.00 0.00 2.57
22 23 5.099042 ACAAAATAAGTACTCCGGCTGAT 57.901 39.130 0.00 0.00 0.00 2.90
23 24 4.546829 ACAAAATAAGTACTCCGGCTGA 57.453 40.909 0.00 0.00 0.00 4.26
24 25 5.622770 AAACAAAATAAGTACTCCGGCTG 57.377 39.130 0.00 0.00 0.00 4.85
25 26 5.766174 TGAAAACAAAATAAGTACTCCGGCT 59.234 36.000 0.00 0.00 0.00 5.52
26 27 6.004408 TGAAAACAAAATAAGTACTCCGGC 57.996 37.500 0.00 0.00 0.00 6.13
27 28 8.911662 CAAATGAAAACAAAATAAGTACTCCGG 58.088 33.333 0.00 0.00 0.00 5.14
28 29 8.911662 CCAAATGAAAACAAAATAAGTACTCCG 58.088 33.333 0.00 0.00 0.00 4.63
29 30 8.708742 GCCAAATGAAAACAAAATAAGTACTCC 58.291 33.333 0.00 0.00 0.00 3.85
30 31 8.708742 GGCCAAATGAAAACAAAATAAGTACTC 58.291 33.333 0.00 0.00 0.00 2.59
31 32 8.428852 AGGCCAAATGAAAACAAAATAAGTACT 58.571 29.630 5.01 0.00 0.00 2.73
32 33 8.601845 AGGCCAAATGAAAACAAAATAAGTAC 57.398 30.769 5.01 0.00 0.00 2.73
34 35 9.791801 AATAGGCCAAATGAAAACAAAATAAGT 57.208 25.926 5.01 0.00 0.00 2.24
36 37 9.784531 TCAATAGGCCAAATGAAAACAAAATAA 57.215 25.926 5.01 0.00 0.00 1.40
37 38 9.784531 TTCAATAGGCCAAATGAAAACAAAATA 57.215 25.926 5.01 0.00 0.00 1.40
38 39 8.688747 TTCAATAGGCCAAATGAAAACAAAAT 57.311 26.923 5.01 0.00 0.00 1.82
39 40 8.511604 TTTCAATAGGCCAAATGAAAACAAAA 57.488 26.923 20.73 4.51 38.45 2.44
40 41 8.511604 TTTTCAATAGGCCAAATGAAAACAAA 57.488 26.923 25.87 13.22 43.18 2.83
41 42 8.511604 TTTTTCAATAGGCCAAATGAAAACAA 57.488 26.923 27.86 18.47 45.92 2.83
219 220 9.967346 TGGAATTTCAAATATGTTCGTGTTTTA 57.033 25.926 0.00 0.00 0.00 1.52
220 221 8.879342 TGGAATTTCAAATATGTTCGTGTTTT 57.121 26.923 0.00 0.00 0.00 2.43
221 222 8.879342 TTGGAATTTCAAATATGTTCGTGTTT 57.121 26.923 0.00 0.00 0.00 2.83
222 223 8.760569 GTTTGGAATTTCAAATATGTTCGTGTT 58.239 29.630 14.93 0.00 38.64 3.32
223 224 7.923344 TGTTTGGAATTTCAAATATGTTCGTGT 59.077 29.630 14.93 0.00 38.64 4.49
224 225 8.291888 TGTTTGGAATTTCAAATATGTTCGTG 57.708 30.769 14.93 0.00 38.64 4.35
225 226 9.487790 AATGTTTGGAATTTCAAATATGTTCGT 57.512 25.926 18.92 3.87 38.09 3.85
243 244 7.551035 TGATTTGTTTCCAAGAAATGTTTGG 57.449 32.000 0.00 0.00 45.17 3.28
244 245 9.837525 TTTTGATTTGTTTCCAAGAAATGTTTG 57.162 25.926 0.00 0.00 34.87 2.93
279 280 9.344772 TGAGCTTTTAAAAGTCCATACTTACAA 57.655 29.630 24.95 3.89 45.37 2.41
280 281 8.911918 TGAGCTTTTAAAAGTCCATACTTACA 57.088 30.769 24.95 8.39 45.37 2.41
281 282 9.216117 TCTGAGCTTTTAAAAGTCCATACTTAC 57.784 33.333 24.95 7.95 45.37 2.34
282 283 9.216117 GTCTGAGCTTTTAAAAGTCCATACTTA 57.784 33.333 24.95 11.01 45.37 2.24
284 285 6.369065 CGTCTGAGCTTTTAAAAGTCCATACT 59.631 38.462 24.95 14.41 38.28 2.12
285 286 6.367969 TCGTCTGAGCTTTTAAAAGTCCATAC 59.632 38.462 24.95 21.20 38.28 2.39
286 287 6.460781 TCGTCTGAGCTTTTAAAAGTCCATA 58.539 36.000 24.95 14.43 38.28 2.74
287 288 5.305585 TCGTCTGAGCTTTTAAAAGTCCAT 58.694 37.500 24.95 11.80 38.28 3.41
288 289 4.699637 TCGTCTGAGCTTTTAAAAGTCCA 58.300 39.130 24.95 20.66 38.28 4.02
289 290 5.668558 TTCGTCTGAGCTTTTAAAAGTCC 57.331 39.130 24.95 17.91 38.28 3.85
290 291 6.716438 ACTTTCGTCTGAGCTTTTAAAAGTC 58.284 36.000 24.95 20.39 38.28 3.01
291 292 6.679327 ACTTTCGTCTGAGCTTTTAAAAGT 57.321 33.333 24.95 14.16 38.28 2.66
292 293 7.971004 AAACTTTCGTCTGAGCTTTTAAAAG 57.029 32.000 21.32 21.32 39.03 2.27
293 294 8.024285 TCAAAACTTTCGTCTGAGCTTTTAAAA 58.976 29.630 0.00 0.00 0.00 1.52
294 295 7.531716 TCAAAACTTTCGTCTGAGCTTTTAAA 58.468 30.769 0.00 0.00 0.00 1.52
295 296 7.079182 TCAAAACTTTCGTCTGAGCTTTTAA 57.921 32.000 0.00 0.00 0.00 1.52
296 297 6.671614 TCAAAACTTTCGTCTGAGCTTTTA 57.328 33.333 0.00 0.00 0.00 1.52
297 298 5.560966 TCAAAACTTTCGTCTGAGCTTTT 57.439 34.783 0.00 0.00 0.00 2.27
298 299 5.560966 TTCAAAACTTTCGTCTGAGCTTT 57.439 34.783 0.00 0.00 0.00 3.51
299 300 5.560966 TTTCAAAACTTTCGTCTGAGCTT 57.439 34.783 0.00 0.00 0.00 3.74
300 301 5.757850 ATTTCAAAACTTTCGTCTGAGCT 57.242 34.783 0.00 0.00 0.00 4.09
301 302 5.399596 GGAATTTCAAAACTTTCGTCTGAGC 59.600 40.000 0.00 0.00 0.00 4.26
302 303 5.621228 CGGAATTTCAAAACTTTCGTCTGAG 59.379 40.000 0.00 0.00 0.00 3.35
303 304 5.294799 TCGGAATTTCAAAACTTTCGTCTGA 59.705 36.000 0.00 0.00 0.00 3.27
304 305 5.507077 TCGGAATTTCAAAACTTTCGTCTG 58.493 37.500 0.00 0.00 0.00 3.51
305 306 5.744666 TCGGAATTTCAAAACTTTCGTCT 57.255 34.783 0.00 0.00 0.00 4.18
306 307 6.986424 ATTCGGAATTTCAAAACTTTCGTC 57.014 33.333 0.00 0.00 0.00 4.20
307 308 9.471084 AAATATTCGGAATTTCAAAACTTTCGT 57.529 25.926 8.76 0.00 0.00 3.85
312 313 9.771534 TCCAAAAATATTCGGAATTTCAAAACT 57.228 25.926 8.76 0.00 0.00 2.66
355 356 8.371770 TGCTTTCGCTATTTTTAATGGTTTTT 57.628 26.923 0.00 0.00 36.97 1.94
356 357 7.954788 TGCTTTCGCTATTTTTAATGGTTTT 57.045 28.000 0.00 0.00 36.97 2.43
357 358 7.412891 GCATGCTTTCGCTATTTTTAATGGTTT 60.413 33.333 11.37 0.00 36.97 3.27
358 359 6.035975 GCATGCTTTCGCTATTTTTAATGGTT 59.964 34.615 11.37 0.00 36.97 3.67
359 360 5.519927 GCATGCTTTCGCTATTTTTAATGGT 59.480 36.000 11.37 0.00 36.97 3.55
360 361 5.050837 GGCATGCTTTCGCTATTTTTAATGG 60.051 40.000 18.92 0.00 36.97 3.16
361 362 5.519566 TGGCATGCTTTCGCTATTTTTAATG 59.480 36.000 18.92 0.00 36.97 1.90
362 363 5.659463 TGGCATGCTTTCGCTATTTTTAAT 58.341 33.333 18.92 0.00 36.97 1.40
363 364 5.065704 TGGCATGCTTTCGCTATTTTTAA 57.934 34.783 18.92 0.00 36.97 1.52
364 365 4.397730 TCTGGCATGCTTTCGCTATTTTTA 59.602 37.500 18.92 0.00 36.97 1.52
365 366 3.193267 TCTGGCATGCTTTCGCTATTTTT 59.807 39.130 18.92 0.00 36.97 1.94
366 367 2.754552 TCTGGCATGCTTTCGCTATTTT 59.245 40.909 18.92 0.00 36.97 1.82
367 368 2.368439 TCTGGCATGCTTTCGCTATTT 58.632 42.857 18.92 0.00 36.97 1.40
368 369 2.042686 TCTGGCATGCTTTCGCTATT 57.957 45.000 18.92 0.00 36.97 1.73
369 370 1.672881 GTTCTGGCATGCTTTCGCTAT 59.327 47.619 18.92 0.00 36.97 2.97
370 371 1.086696 GTTCTGGCATGCTTTCGCTA 58.913 50.000 18.92 0.00 36.97 4.26
371 372 1.589716 GGTTCTGGCATGCTTTCGCT 61.590 55.000 18.92 0.00 36.97 4.93
372 373 1.153958 GGTTCTGGCATGCTTTCGC 60.154 57.895 18.92 5.65 0.00 4.70
373 374 0.883833 AAGGTTCTGGCATGCTTTCG 59.116 50.000 18.92 3.77 0.00 3.46
374 375 2.165998 AGAAGGTTCTGGCATGCTTTC 58.834 47.619 18.92 9.90 35.89 2.62
375 376 2.299326 AGAAGGTTCTGGCATGCTTT 57.701 45.000 18.92 1.20 35.89 3.51
376 377 2.573462 TCTAGAAGGTTCTGGCATGCTT 59.427 45.455 18.92 1.09 38.19 3.91
377 378 2.191400 TCTAGAAGGTTCTGGCATGCT 58.809 47.619 18.92 0.00 38.19 3.79
378 379 2.698855 TCTAGAAGGTTCTGGCATGC 57.301 50.000 9.90 9.90 38.19 4.06
379 380 4.521146 ACATTCTAGAAGGTTCTGGCATG 58.479 43.478 16.72 12.08 42.15 4.06
380 381 4.851639 ACATTCTAGAAGGTTCTGGCAT 57.148 40.909 16.72 0.00 38.19 4.40
381 382 4.640771 AACATTCTAGAAGGTTCTGGCA 57.359 40.909 25.58 0.00 40.75 4.92
382 383 8.732746 TTATAAACATTCTAGAAGGTTCTGGC 57.267 34.615 29.62 0.00 43.41 4.85
408 409 8.563732 GGTTGTGTACGGGTTTTACTTATTTTA 58.436 33.333 0.00 0.00 0.00 1.52
409 410 7.285172 AGGTTGTGTACGGGTTTTACTTATTTT 59.715 33.333 0.00 0.00 0.00 1.82
410 411 6.772233 AGGTTGTGTACGGGTTTTACTTATTT 59.228 34.615 0.00 0.00 0.00 1.40
411 412 6.298361 AGGTTGTGTACGGGTTTTACTTATT 58.702 36.000 0.00 0.00 0.00 1.40
412 413 5.868454 AGGTTGTGTACGGGTTTTACTTAT 58.132 37.500 0.00 0.00 0.00 1.73
413 414 5.289083 AGGTTGTGTACGGGTTTTACTTA 57.711 39.130 0.00 0.00 0.00 2.24
414 415 4.155063 AGGTTGTGTACGGGTTTTACTT 57.845 40.909 0.00 0.00 0.00 2.24
415 416 3.843893 AGGTTGTGTACGGGTTTTACT 57.156 42.857 0.00 0.00 0.00 2.24
416 417 4.552572 CGAAAGGTTGTGTACGGGTTTTAC 60.553 45.833 0.00 0.00 0.00 2.01
417 418 3.559242 CGAAAGGTTGTGTACGGGTTTTA 59.441 43.478 0.00 0.00 0.00 1.52
418 419 2.355444 CGAAAGGTTGTGTACGGGTTTT 59.645 45.455 0.00 0.00 0.00 2.43
419 420 1.941975 CGAAAGGTTGTGTACGGGTTT 59.058 47.619 0.00 0.00 0.00 3.27
420 421 1.585297 CGAAAGGTTGTGTACGGGTT 58.415 50.000 0.00 0.00 0.00 4.11
421 422 3.294079 CGAAAGGTTGTGTACGGGT 57.706 52.632 0.00 0.00 0.00 5.28
434 435 1.067776 ACTGAGCGAACCTACCGAAAG 60.068 52.381 0.00 0.00 0.00 2.62
435 436 0.963962 ACTGAGCGAACCTACCGAAA 59.036 50.000 0.00 0.00 0.00 3.46
436 437 0.242825 CACTGAGCGAACCTACCGAA 59.757 55.000 0.00 0.00 0.00 4.30
437 438 1.592400 CCACTGAGCGAACCTACCGA 61.592 60.000 0.00 0.00 0.00 4.69
438 439 1.153823 CCACTGAGCGAACCTACCG 60.154 63.158 0.00 0.00 0.00 4.02
439 440 1.448013 GCCACTGAGCGAACCTACC 60.448 63.158 0.00 0.00 0.00 3.18
440 441 0.737715 CAGCCACTGAGCGAACCTAC 60.738 60.000 0.00 0.00 38.01 3.18
441 442 1.591703 CAGCCACTGAGCGAACCTA 59.408 57.895 0.00 0.00 38.01 3.08
442 443 2.345244 CAGCCACTGAGCGAACCT 59.655 61.111 0.00 0.00 38.01 3.50
443 444 3.426568 GCAGCCACTGAGCGAACC 61.427 66.667 0.00 0.00 38.01 3.62
444 445 1.510480 AAAGCAGCCACTGAGCGAAC 61.510 55.000 0.00 0.00 38.01 3.95
445 446 1.227943 AAAGCAGCCACTGAGCGAA 60.228 52.632 0.00 0.00 38.01 4.70
446 447 1.962822 CAAAGCAGCCACTGAGCGA 60.963 57.895 0.00 0.00 38.01 4.93
447 448 2.256591 ACAAAGCAGCCACTGAGCG 61.257 57.895 0.00 0.00 38.01 5.03
448 449 1.285023 CACAAAGCAGCCACTGAGC 59.715 57.895 0.00 0.00 32.44 4.26
449 450 1.285023 GCACAAAGCAGCCACTGAG 59.715 57.895 0.00 0.00 44.79 3.35
450 451 2.545596 CGCACAAAGCAGCCACTGA 61.546 57.895 0.00 0.00 46.13 3.41
451 452 2.050714 CGCACAAAGCAGCCACTG 60.051 61.111 0.00 0.00 46.13 3.66
452 453 1.789078 CTTCGCACAAAGCAGCCACT 61.789 55.000 0.00 0.00 46.13 4.00
453 454 1.370900 CTTCGCACAAAGCAGCCAC 60.371 57.895 0.00 0.00 46.13 5.01
454 455 3.033184 CTTCGCACAAAGCAGCCA 58.967 55.556 0.00 0.00 46.13 4.75
459 460 2.497628 CGTCGCTTCGCACAAAGC 60.498 61.111 5.60 5.60 46.54 3.51
460 461 2.170985 CCGTCGCTTCGCACAAAG 59.829 61.111 0.00 0.00 0.00 2.77
461 462 4.007940 GCCGTCGCTTCGCACAAA 62.008 61.111 0.00 0.00 0.00 2.83
478 479 3.625897 TCGCGGATAGGGGCATGG 61.626 66.667 6.13 0.00 0.00 3.66
479 480 2.357517 GTCGCGGATAGGGGCATG 60.358 66.667 6.13 0.00 37.36 4.06
480 481 3.991051 CGTCGCGGATAGGGGCAT 61.991 66.667 6.13 0.00 37.23 4.40
482 483 3.222354 AATCGTCGCGGATAGGGGC 62.222 63.158 6.13 0.00 0.00 5.80
483 484 1.080705 GAATCGTCGCGGATAGGGG 60.081 63.158 6.13 0.00 0.00 4.79
484 485 1.442184 CGAATCGTCGCGGATAGGG 60.442 63.158 6.13 0.00 41.08 3.53
485 486 4.132426 CGAATCGTCGCGGATAGG 57.868 61.111 6.13 0.00 41.08 2.57
494 495 2.398498 AGCATACATCAGCGAATCGTC 58.602 47.619 4.07 0.00 35.48 4.20
495 496 2.515926 AGCATACATCAGCGAATCGT 57.484 45.000 4.07 0.00 35.48 3.73
496 497 3.867055 AAAGCATACATCAGCGAATCG 57.133 42.857 0.00 0.00 35.48 3.34
497 498 5.814783 AGAAAAAGCATACATCAGCGAATC 58.185 37.500 0.00 0.00 35.48 2.52
498 499 5.824904 AGAAAAAGCATACATCAGCGAAT 57.175 34.783 0.00 0.00 35.48 3.34
499 500 5.393124 CAAGAAAAAGCATACATCAGCGAA 58.607 37.500 0.00 0.00 35.48 4.70
500 501 4.672542 GCAAGAAAAAGCATACATCAGCGA 60.673 41.667 0.00 0.00 35.48 4.93
501 502 3.545078 GCAAGAAAAAGCATACATCAGCG 59.455 43.478 0.00 0.00 35.48 5.18
502 503 3.545078 CGCAAGAAAAAGCATACATCAGC 59.455 43.478 0.00 0.00 43.02 4.26
503 504 4.100529 CCGCAAGAAAAAGCATACATCAG 58.899 43.478 0.00 0.00 43.02 2.90
504 505 3.119531 CCCGCAAGAAAAAGCATACATCA 60.120 43.478 0.00 0.00 43.02 3.07
505 506 3.438360 CCCGCAAGAAAAAGCATACATC 58.562 45.455 0.00 0.00 43.02 3.06
506 507 2.166254 CCCCGCAAGAAAAAGCATACAT 59.834 45.455 0.00 0.00 43.02 2.29
507 508 1.543802 CCCCGCAAGAAAAAGCATACA 59.456 47.619 0.00 0.00 43.02 2.29
508 509 1.135112 CCCCCGCAAGAAAAAGCATAC 60.135 52.381 0.00 0.00 43.02 2.39
509 510 1.181786 CCCCCGCAAGAAAAAGCATA 58.818 50.000 0.00 0.00 43.02 3.14
510 511 0.541764 TCCCCCGCAAGAAAAAGCAT 60.542 50.000 0.00 0.00 43.02 3.79
511 512 1.152652 TCCCCCGCAAGAAAAAGCA 60.153 52.632 0.00 0.00 43.02 3.91
512 513 1.289066 GTCCCCCGCAAGAAAAAGC 59.711 57.895 0.00 0.00 43.02 3.51
513 514 1.036707 TTGTCCCCCGCAAGAAAAAG 58.963 50.000 0.00 0.00 43.02 2.27
514 515 1.342819 CATTGTCCCCCGCAAGAAAAA 59.657 47.619 0.00 0.00 43.02 1.94
515 516 0.965439 CATTGTCCCCCGCAAGAAAA 59.035 50.000 0.00 0.00 43.02 2.29
516 517 0.111446 TCATTGTCCCCCGCAAGAAA 59.889 50.000 0.00 0.00 43.02 2.52
517 518 0.331278 ATCATTGTCCCCCGCAAGAA 59.669 50.000 0.00 0.00 43.02 2.52
518 519 0.394216 CATCATTGTCCCCCGCAAGA 60.394 55.000 0.00 0.00 43.02 3.02
519 520 0.680921 ACATCATTGTCCCCCGCAAG 60.681 55.000 0.00 0.00 0.00 4.01
520 521 0.621082 TACATCATTGTCCCCCGCAA 59.379 50.000 0.00 0.00 37.28 4.85
521 522 0.843309 ATACATCATTGTCCCCCGCA 59.157 50.000 0.00 0.00 37.28 5.69
522 523 1.238439 CATACATCATTGTCCCCCGC 58.762 55.000 0.00 0.00 37.28 6.13
523 524 2.638480 ACATACATCATTGTCCCCCG 57.362 50.000 0.00 0.00 37.28 5.73
524 525 5.186797 TCAAAAACATACATCATTGTCCCCC 59.813 40.000 0.00 0.00 37.28 5.40
525 526 6.099341 GTCAAAAACATACATCATTGTCCCC 58.901 40.000 0.00 0.00 37.28 4.81
526 527 6.099341 GGTCAAAAACATACATCATTGTCCC 58.901 40.000 0.00 0.00 37.28 4.46
527 528 6.686630 TGGTCAAAAACATACATCATTGTCC 58.313 36.000 0.00 0.00 37.28 4.02
528 529 6.308766 GCTGGTCAAAAACATACATCATTGTC 59.691 38.462 0.00 0.00 37.28 3.18
529 530 6.158598 GCTGGTCAAAAACATACATCATTGT 58.841 36.000 0.00 0.00 39.98 2.71
530 531 6.157904 TGCTGGTCAAAAACATACATCATTG 58.842 36.000 0.00 0.00 0.00 2.82
531 532 6.343716 TGCTGGTCAAAAACATACATCATT 57.656 33.333 0.00 0.00 0.00 2.57
532 533 5.981088 TGCTGGTCAAAAACATACATCAT 57.019 34.783 0.00 0.00 0.00 2.45
533 534 5.781210 TTGCTGGTCAAAAACATACATCA 57.219 34.783 0.00 0.00 0.00 3.07
534 535 5.982516 TGTTTGCTGGTCAAAAACATACATC 59.017 36.000 7.23 0.00 45.35 3.06
535 536 5.911752 TGTTTGCTGGTCAAAAACATACAT 58.088 33.333 7.23 0.00 45.35 2.29
536 537 5.330455 TGTTTGCTGGTCAAAAACATACA 57.670 34.783 7.23 0.00 45.35 2.29
541 542 2.344142 CACGTGTTTGCTGGTCAAAAAC 59.656 45.455 7.58 1.65 45.35 2.43
542 543 2.229062 TCACGTGTTTGCTGGTCAAAAA 59.771 40.909 16.51 0.00 45.35 1.94
543 544 1.813178 TCACGTGTTTGCTGGTCAAAA 59.187 42.857 16.51 0.00 45.35 2.44
544 545 1.454201 TCACGTGTTTGCTGGTCAAA 58.546 45.000 16.51 0.00 42.01 2.69
545 546 1.674359 ATCACGTGTTTGCTGGTCAA 58.326 45.000 16.51 0.00 0.00 3.18
546 547 1.674359 AATCACGTGTTTGCTGGTCA 58.326 45.000 16.51 0.00 0.00 4.02
547 548 2.774439 AAATCACGTGTTTGCTGGTC 57.226 45.000 16.51 0.00 0.00 4.02
548 549 2.165437 ACAAAATCACGTGTTTGCTGGT 59.835 40.909 23.85 12.79 38.10 4.00
549 550 2.808244 ACAAAATCACGTGTTTGCTGG 58.192 42.857 23.85 12.30 38.10 4.85
550 551 3.541903 GCAACAAAATCACGTGTTTGCTG 60.542 43.478 23.85 22.61 38.10 4.41
551 552 2.602660 GCAACAAAATCACGTGTTTGCT 59.397 40.909 23.85 14.07 38.10 3.91
552 553 2.285544 GGCAACAAAATCACGTGTTTGC 60.286 45.455 23.85 21.47 38.10 3.68
558 559 1.369930 CGCGGCAACAAAATCACGT 60.370 52.632 0.00 0.00 0.00 4.49
573 574 0.737367 ACATGTGAGATGTGACCGCG 60.737 55.000 0.00 0.00 0.00 6.46
575 576 3.849911 ACTTACATGTGAGATGTGACCG 58.150 45.455 23.20 0.00 33.76 4.79
578 579 8.066612 TGATCTTACTTACATGTGAGATGTGA 57.933 34.615 23.20 14.58 41.37 3.58
579 580 8.883954 ATGATCTTACTTACATGTGAGATGTG 57.116 34.615 23.20 10.42 41.37 3.21
580 581 7.864882 CGATGATCTTACTTACATGTGAGATGT 59.135 37.037 23.20 7.62 41.37 3.06
581 582 7.864882 ACGATGATCTTACTTACATGTGAGATG 59.135 37.037 23.20 12.25 41.37 2.90
582 583 7.946207 ACGATGATCTTACTTACATGTGAGAT 58.054 34.615 23.20 14.97 43.11 2.75
583 584 7.334844 ACGATGATCTTACTTACATGTGAGA 57.665 36.000 23.20 11.32 37.07 3.27
584 585 6.638873 GGACGATGATCTTACTTACATGTGAG 59.361 42.308 15.61 15.61 0.00 3.51
585 586 6.321435 AGGACGATGATCTTACTTACATGTGA 59.679 38.462 9.11 0.00 0.00 3.58
601 602 1.136774 CGCAACGAGAGGACGATGA 59.863 57.895 0.00 0.00 38.07 2.92
606 607 2.559840 TCGACGCAACGAGAGGAC 59.440 61.111 0.00 0.00 37.37 3.85
614 615 0.522705 TATCACGCTCTCGACGCAAC 60.523 55.000 3.22 0.00 39.41 4.17
616 617 1.062047 GTATCACGCTCTCGACGCA 59.938 57.895 3.22 0.00 39.41 5.24
617 618 1.999289 CGTATCACGCTCTCGACGC 60.999 63.158 0.00 0.00 39.41 5.19
618 619 1.367782 CCGTATCACGCTCTCGACG 60.368 63.158 0.00 0.00 40.91 5.12
619 620 0.589229 CACCGTATCACGCTCTCGAC 60.589 60.000 0.00 0.00 40.91 4.20
621 622 0.861866 CACACCGTATCACGCTCTCG 60.862 60.000 0.00 0.00 40.91 4.04
629 638 2.147958 GTTTTCCAGCACACCGTATCA 58.852 47.619 0.00 0.00 0.00 2.15
643 652 0.318445 CTGCTGTGCTGCTGTTTTCC 60.318 55.000 0.00 0.00 0.00 3.13
646 655 1.450531 GACCTGCTGTGCTGCTGTTT 61.451 55.000 0.00 0.00 0.00 2.83
661 670 2.109126 GTACGTAGCGTCGGGACCT 61.109 63.158 0.00 0.00 41.54 3.85
672 681 0.821517 TGAGCATGGGGTGTACGTAG 59.178 55.000 0.00 0.00 0.00 3.51
675 684 0.875908 CGATGAGCATGGGGTGTACG 60.876 60.000 0.00 0.00 0.00 3.67
702 711 2.214181 CTCGACCGGCTAGTGCTTGT 62.214 60.000 0.00 0.00 39.59 3.16
718 734 0.606944 CCTATCCTCCTCCGTCCTCG 60.607 65.000 0.00 0.00 0.00 4.63
730 746 2.822637 CGTGCCATGCCCCTATCCT 61.823 63.158 0.00 0.00 0.00 3.24
732 748 1.598130 GACGTGCCATGCCCCTATC 60.598 63.158 0.00 0.00 0.00 2.08
735 751 4.722700 GTGACGTGCCATGCCCCT 62.723 66.667 0.00 0.00 0.00 4.79
765 781 3.332919 GTGAGATGGATGGATGGATTCG 58.667 50.000 0.00 0.00 0.00 3.34
768 784 2.643304 CAGGTGAGATGGATGGATGGAT 59.357 50.000 0.00 0.00 0.00 3.41
769 785 2.052468 CAGGTGAGATGGATGGATGGA 58.948 52.381 0.00 0.00 0.00 3.41
771 787 1.142262 TGCAGGTGAGATGGATGGATG 59.858 52.381 0.00 0.00 0.00 3.51
772 788 1.142465 GTGCAGGTGAGATGGATGGAT 59.858 52.381 0.00 0.00 0.00 3.41
773 789 0.543277 GTGCAGGTGAGATGGATGGA 59.457 55.000 0.00 0.00 0.00 3.41
775 791 0.253894 TGGTGCAGGTGAGATGGATG 59.746 55.000 0.00 0.00 0.00 3.51
776 792 0.254178 GTGGTGCAGGTGAGATGGAT 59.746 55.000 0.00 0.00 0.00 3.41
777 793 1.679311 GTGGTGCAGGTGAGATGGA 59.321 57.895 0.00 0.00 0.00 3.41
815 864 2.428890 GAGTGGAGGTCGACTGATTGAT 59.571 50.000 16.46 0.00 35.02 2.57
816 865 1.819288 GAGTGGAGGTCGACTGATTGA 59.181 52.381 16.46 0.00 35.02 2.57
817 866 1.134965 GGAGTGGAGGTCGACTGATTG 60.135 57.143 16.46 0.00 35.02 2.67
818 867 1.187087 GGAGTGGAGGTCGACTGATT 58.813 55.000 16.46 0.00 35.02 2.57
819 868 0.039764 TGGAGTGGAGGTCGACTGAT 59.960 55.000 16.46 1.52 35.02 2.90
840 889 0.904865 TGACTAGCTGGTGGAGTGGG 60.905 60.000 7.76 0.00 0.00 4.61
841 890 0.247736 GTGACTAGCTGGTGGAGTGG 59.752 60.000 7.76 0.00 0.00 4.00
842 891 1.203523 GAGTGACTAGCTGGTGGAGTG 59.796 57.143 7.76 0.00 0.00 3.51
843 892 1.203063 TGAGTGACTAGCTGGTGGAGT 60.203 52.381 7.76 0.00 0.00 3.85
844 893 1.203523 GTGAGTGACTAGCTGGTGGAG 59.796 57.143 7.76 0.00 0.00 3.86
854 903 1.166129 GCCGAGTGAGTGAGTGACTA 58.834 55.000 0.00 0.00 33.83 2.59
876 925 2.981909 CTGGTGCTGGTGCTGGTG 60.982 66.667 0.00 0.00 40.48 4.17
877 926 4.962836 GCTGGTGCTGGTGCTGGT 62.963 66.667 0.00 0.00 40.48 4.00
878 927 4.960866 TGCTGGTGCTGGTGCTGG 62.961 66.667 0.00 0.00 40.48 4.85
879 928 3.667282 GTGCTGGTGCTGGTGCTG 61.667 66.667 0.00 0.00 40.48 4.41
880 929 4.962836 GGTGCTGGTGCTGGTGCT 62.963 66.667 0.00 0.00 40.48 4.40
882 931 2.981909 CTGGTGCTGGTGCTGGTG 60.982 66.667 0.00 0.00 40.48 4.17
883 932 4.962836 GCTGGTGCTGGTGCTGGT 62.963 66.667 0.00 0.00 40.48 4.00
1066 1143 4.798682 CGAGTAGGGCCCCCACCT 62.799 72.222 21.43 9.24 42.15 4.00
1543 1620 2.494059 ACACAACAAGGGAATGTCTCG 58.506 47.619 0.00 0.00 31.81 4.04
1574 1651 1.603739 AAAGGGAGCCAAACGGAGC 60.604 57.895 0.00 0.00 0.00 4.70
1578 1659 4.492604 TCCAAAGGGAGCCAAACG 57.507 55.556 0.00 0.00 38.64 3.60
1657 1749 2.311124 ATCCAAATCCCGAACTCGAC 57.689 50.000 0.00 0.00 43.02 4.20
1676 1768 3.140325 AGATGGAGCCTGTTTCGAAAA 57.860 42.857 13.10 2.56 0.00 2.29
1686 1784 6.948309 ACTAAATTAACACAAAGATGGAGCCT 59.052 34.615 0.00 0.00 0.00 4.58
1703 1801 6.790461 TGGGGAGTATATGGAGCACTAAATTA 59.210 38.462 0.00 0.00 0.00 1.40
1704 1802 5.610982 TGGGGAGTATATGGAGCACTAAATT 59.389 40.000 0.00 0.00 0.00 1.82
1710 1808 1.625818 CCTGGGGAGTATATGGAGCAC 59.374 57.143 0.00 0.00 0.00 4.40
1712 1810 1.903183 GACCTGGGGAGTATATGGAGC 59.097 57.143 0.00 0.00 0.00 4.70
1713 1811 3.551635 AGACCTGGGGAGTATATGGAG 57.448 52.381 0.00 0.00 0.00 3.86
1716 1814 5.896073 AAGAAAGACCTGGGGAGTATATG 57.104 43.478 0.00 0.00 0.00 1.78
1722 1832 4.018415 TGGATAAAAGAAAGACCTGGGGAG 60.018 45.833 0.00 0.00 0.00 4.30
1728 1838 3.344515 GCCGTGGATAAAAGAAAGACCT 58.655 45.455 0.00 0.00 0.00 3.85
1729 1839 2.422479 GGCCGTGGATAAAAGAAAGACC 59.578 50.000 0.00 0.00 0.00 3.85
1768 1878 0.752658 TGTCAGTGAGTGTGAGTGGG 59.247 55.000 0.00 0.00 0.00 4.61
1769 1879 2.477825 CTTGTCAGTGAGTGTGAGTGG 58.522 52.381 0.00 0.00 0.00 4.00
1770 1880 2.477825 CCTTGTCAGTGAGTGTGAGTG 58.522 52.381 0.00 0.00 0.00 3.51
1771 1881 1.202580 GCCTTGTCAGTGAGTGTGAGT 60.203 52.381 0.00 0.00 0.00 3.41
1772 1882 1.506493 GCCTTGTCAGTGAGTGTGAG 58.494 55.000 0.00 0.00 0.00 3.51
1773 1883 0.106708 GGCCTTGTCAGTGAGTGTGA 59.893 55.000 0.00 0.00 0.00 3.58
1774 1884 0.179048 TGGCCTTGTCAGTGAGTGTG 60.179 55.000 3.32 0.00 0.00 3.82
1775 1885 0.546122 TTGGCCTTGTCAGTGAGTGT 59.454 50.000 3.32 0.00 0.00 3.55
1776 1886 1.679139 TTTGGCCTTGTCAGTGAGTG 58.321 50.000 3.32 0.00 0.00 3.51
1777 1887 2.664402 ATTTGGCCTTGTCAGTGAGT 57.336 45.000 3.32 0.00 0.00 3.41
1778 1888 4.761739 TCTTAATTTGGCCTTGTCAGTGAG 59.238 41.667 3.32 0.00 0.00 3.51
1779 1889 4.724399 TCTTAATTTGGCCTTGTCAGTGA 58.276 39.130 3.32 0.00 0.00 3.41
1797 1915 2.878406 GTGCAAGTTCTTGGTGCTCTTA 59.122 45.455 13.35 0.00 39.09 2.10
1823 1947 8.131455 TCAAACAAACGAGATTATCAGATAGC 57.869 34.615 0.00 0.00 0.00 2.97
1873 2019 8.411683 CCAACAAGGTAAGAATATACGAGTAGT 58.588 37.037 0.00 0.00 0.00 2.73
1874 2020 8.798748 CCAACAAGGTAAGAATATACGAGTAG 57.201 38.462 0.00 0.00 0.00 2.57
1891 2037 0.868406 GTCTTCGCAGACCAACAAGG 59.132 55.000 3.60 0.00 43.50 3.61
1914 2065 4.231439 GCGGCCTACCCTTACCGG 62.231 72.222 0.00 0.00 45.72 5.28
1928 2079 1.097232 TGAAGCAGAATGAATGGCGG 58.903 50.000 0.00 0.00 39.69 6.13
1937 2088 3.070018 CTCGACTTGGTTGAAGCAGAAT 58.930 45.455 0.00 0.00 34.68 2.40
1952 2103 1.043116 TGGATCGGATTGGCTCGACT 61.043 55.000 0.00 0.00 38.25 4.18
1953 2104 0.179084 TTGGATCGGATTGGCTCGAC 60.179 55.000 0.00 0.00 38.25 4.20
1954 2105 0.758734 ATTGGATCGGATTGGCTCGA 59.241 50.000 0.00 0.00 39.79 4.04
1998 2157 2.574929 GTGTATCCCACGACGGCA 59.425 61.111 0.00 0.00 33.61 5.69
2007 2166 1.606903 AGGACTCGATCGTGTATCCC 58.393 55.000 21.55 17.92 0.00 3.85
2008 2167 2.859032 GCAAGGACTCGATCGTGTATCC 60.859 54.545 21.55 18.55 0.00 2.59
2010 2169 2.025155 AGCAAGGACTCGATCGTGTAT 58.975 47.619 21.55 11.47 0.00 2.29
2011 2170 1.132453 CAGCAAGGACTCGATCGTGTA 59.868 52.381 21.55 0.00 0.00 2.90
2012 2171 0.109086 CAGCAAGGACTCGATCGTGT 60.109 55.000 21.66 21.66 0.00 4.49
2013 2172 0.803768 CCAGCAAGGACTCGATCGTG 60.804 60.000 15.94 15.53 41.22 4.35
2014 2173 0.965866 TCCAGCAAGGACTCGATCGT 60.966 55.000 15.94 0.00 43.07 3.73
2015 2174 1.809869 TCCAGCAAGGACTCGATCG 59.190 57.895 9.36 9.36 43.07 3.69
2023 2182 2.583441 CGTGAGGGTCCAGCAAGGA 61.583 63.158 0.00 0.00 46.75 3.36
2024 2183 2.046892 CGTGAGGGTCCAGCAAGG 60.047 66.667 0.00 0.00 39.47 3.61
2025 2184 2.743928 GCGTGAGGGTCCAGCAAG 60.744 66.667 0.00 0.00 0.00 4.01
2026 2185 4.329545 GGCGTGAGGGTCCAGCAA 62.330 66.667 0.00 0.00 0.00 3.91
2028 2187 4.101448 ATGGCGTGAGGGTCCAGC 62.101 66.667 0.00 0.00 32.78 4.85
2029 2188 1.976132 ATCATGGCGTGAGGGTCCAG 61.976 60.000 15.57 0.00 40.92 3.86
2030 2189 1.971505 GATCATGGCGTGAGGGTCCA 61.972 60.000 15.57 0.00 40.92 4.02
2031 2190 1.227674 GATCATGGCGTGAGGGTCC 60.228 63.158 15.57 0.00 40.92 4.46
2032 2191 1.592669 CGATCATGGCGTGAGGGTC 60.593 63.158 15.57 7.10 40.92 4.46
2033 2192 2.501128 CGATCATGGCGTGAGGGT 59.499 61.111 15.57 0.00 40.92 4.34
2034 2193 2.104572 ATCCGATCATGGCGTGAGGG 62.105 60.000 15.57 17.37 40.92 4.30
2035 2194 0.603065 TATCCGATCATGGCGTGAGG 59.397 55.000 15.57 11.67 40.92 3.86
2036 2195 1.702886 GTATCCGATCATGGCGTGAG 58.297 55.000 15.57 2.29 40.92 3.51
2037 2196 0.039527 CGTATCCGATCATGGCGTGA 60.040 55.000 12.53 12.53 42.06 4.35
2038 2197 1.008875 CCGTATCCGATCATGGCGTG 61.009 60.000 0.00 0.00 35.63 5.34
2047 2206 1.227263 GTGCTGTGCCGTATCCGAT 60.227 57.895 0.00 0.00 35.63 4.18
2074 2233 4.072088 GCCACACGGTCGCTTTCG 62.072 66.667 0.00 0.00 33.28 3.46
2095 2254 4.115199 GGTTGATCGGCTGGCCCT 62.115 66.667 0.00 0.00 0.00 5.19
2103 2265 0.108138 AAGAAGGCTCGGTTGATCGG 60.108 55.000 0.00 0.00 0.00 4.18
2104 2266 1.002366 CAAGAAGGCTCGGTTGATCG 58.998 55.000 0.00 0.00 0.00 3.69
2123 2286 2.299297 ACCACACTTCTAGTACACTGCC 59.701 50.000 0.00 0.00 0.00 4.85
2128 2291 3.895656 AGCTTCACCACACTTCTAGTACA 59.104 43.478 0.00 0.00 0.00 2.90
2133 2296 1.623811 GGGAGCTTCACCACACTTCTA 59.376 52.381 0.00 0.00 0.00 2.10
2134 2297 0.398318 GGGAGCTTCACCACACTTCT 59.602 55.000 0.00 0.00 0.00 2.85
2166 2329 2.360852 GTCTGGTCTCCGTCCGGA 60.361 66.667 0.00 0.00 42.90 5.14
2167 2330 3.450115 GGTCTGGTCTCCGTCCGG 61.450 72.222 0.00 0.00 0.00 5.14
2168 2331 3.812019 CGGTCTGGTCTCCGTCCG 61.812 72.222 0.00 0.00 41.58 4.79
2169 2332 1.975407 TTCGGTCTGGTCTCCGTCC 60.975 63.158 3.64 0.00 45.88 4.79
2170 2333 1.212229 GTTCGGTCTGGTCTCCGTC 59.788 63.158 3.64 0.00 45.88 4.79
2171 2334 2.273912 GGTTCGGTCTGGTCTCCGT 61.274 63.158 3.64 0.00 45.88 4.69
2172 2335 2.273179 TGGTTCGGTCTGGTCTCCG 61.273 63.158 0.00 0.00 46.93 4.63
2173 2336 1.292541 GTGGTTCGGTCTGGTCTCC 59.707 63.158 0.00 0.00 0.00 3.71
2184 2347 0.812412 ACCAACCTTCACGTGGTTCG 60.812 55.000 17.00 7.52 45.05 3.95
2187 2350 0.544697 AGAACCAACCTTCACGTGGT 59.455 50.000 17.00 2.35 39.91 4.16
2200 2363 2.244695 ACACCTGACACGATAGAACCA 58.755 47.619 0.00 0.00 41.38 3.67
2201 2364 3.314541 AACACCTGACACGATAGAACC 57.685 47.619 0.00 0.00 41.38 3.62
2202 2365 3.858238 GCTAACACCTGACACGATAGAAC 59.142 47.826 0.00 0.00 41.38 3.01
2208 2371 0.830444 AGGGCTAACACCTGACACGA 60.830 55.000 0.00 0.00 36.85 4.35
2215 2378 1.569653 GTGGAGTAGGGCTAACACCT 58.430 55.000 7.47 0.00 42.15 4.00
2216 2379 0.540454 GGTGGAGTAGGGCTAACACC 59.460 60.000 0.00 0.00 43.42 4.16
2217 2380 0.175073 CGGTGGAGTAGGGCTAACAC 59.825 60.000 0.00 0.00 35.61 3.32
2218 2381 1.610554 GCGGTGGAGTAGGGCTAACA 61.611 60.000 0.00 0.00 0.00 2.41
2219 2382 1.143401 GCGGTGGAGTAGGGCTAAC 59.857 63.158 0.00 0.00 0.00 2.34
2220 2383 2.062177 GGCGGTGGAGTAGGGCTAA 61.062 63.158 0.00 0.00 0.00 3.09
2221 2384 2.443390 GGCGGTGGAGTAGGGCTA 60.443 66.667 0.00 0.00 0.00 3.93
2225 2388 3.834799 GTCGGGCGGTGGAGTAGG 61.835 72.222 0.00 0.00 0.00 3.18
2226 2389 3.834799 GGTCGGGCGGTGGAGTAG 61.835 72.222 0.00 0.00 0.00 2.57
2232 2395 4.733542 ATTTGGGGTCGGGCGGTG 62.734 66.667 0.00 0.00 0.00 4.94
2233 2396 4.419921 GATTTGGGGTCGGGCGGT 62.420 66.667 0.00 0.00 0.00 5.68
2237 2400 2.279037 AATCCGGATTTGGGGTCGGG 62.279 60.000 24.27 0.00 42.44 5.14
2238 2401 0.818040 GAATCCGGATTTGGGGTCGG 60.818 60.000 29.74 0.00 43.42 4.79
2239 2402 0.180406 AGAATCCGGATTTGGGGTCG 59.820 55.000 29.74 0.00 0.00 4.79
2240 2403 1.064685 ACAGAATCCGGATTTGGGGTC 60.065 52.381 29.74 16.48 0.00 4.46
2241 2404 0.999712 ACAGAATCCGGATTTGGGGT 59.000 50.000 29.74 20.81 0.00 4.95
2242 2405 1.680338 GACAGAATCCGGATTTGGGG 58.320 55.000 29.74 20.23 0.00 4.96
2243 2406 1.680338 GGACAGAATCCGGATTTGGG 58.320 55.000 29.74 22.45 37.88 4.12
2252 2415 3.467803 CCTATCCAAACGGACAGAATCC 58.532 50.000 0.00 0.00 45.20 3.01
2253 2416 3.134081 TCCCTATCCAAACGGACAGAATC 59.866 47.826 0.00 0.00 34.62 2.52
2254 2417 3.112263 TCCCTATCCAAACGGACAGAAT 58.888 45.455 0.00 0.00 34.62 2.40
2255 2418 2.542550 TCCCTATCCAAACGGACAGAA 58.457 47.619 0.00 0.00 34.62 3.02
2256 2419 2.241281 TCCCTATCCAAACGGACAGA 57.759 50.000 0.00 0.00 34.62 3.41
2257 2420 3.467803 GAATCCCTATCCAAACGGACAG 58.532 50.000 0.00 0.00 34.62 3.51
2258 2421 2.159014 CGAATCCCTATCCAAACGGACA 60.159 50.000 0.00 0.00 34.62 4.02
2259 2422 2.480845 CGAATCCCTATCCAAACGGAC 58.519 52.381 0.00 0.00 34.62 4.79
2260 2423 1.414919 CCGAATCCCTATCCAAACGGA 59.585 52.381 0.00 0.00 41.30 4.69
2261 2424 1.542547 CCCGAATCCCTATCCAAACGG 60.543 57.143 0.00 0.00 39.02 4.44
2262 2425 1.542547 CCCCGAATCCCTATCCAAACG 60.543 57.143 0.00 0.00 0.00 3.60
2263 2426 1.493446 ACCCCGAATCCCTATCCAAAC 59.507 52.381 0.00 0.00 0.00 2.93
2264 2427 1.772453 GACCCCGAATCCCTATCCAAA 59.228 52.381 0.00 0.00 0.00 3.28
2265 2428 1.430992 GACCCCGAATCCCTATCCAA 58.569 55.000 0.00 0.00 0.00 3.53
2266 2429 0.830444 CGACCCCGAATCCCTATCCA 60.830 60.000 0.00 0.00 38.22 3.41
2267 2430 0.830866 ACGACCCCGAATCCCTATCC 60.831 60.000 0.00 0.00 39.50 2.59
2268 2431 0.317479 CACGACCCCGAATCCCTATC 59.683 60.000 0.00 0.00 39.50 2.08
2269 2432 0.398098 ACACGACCCCGAATCCCTAT 60.398 55.000 0.00 0.00 39.50 2.57
2270 2433 1.000739 ACACGACCCCGAATCCCTA 59.999 57.895 0.00 0.00 39.50 3.53
2271 2434 2.284405 ACACGACCCCGAATCCCT 60.284 61.111 0.00 0.00 39.50 4.20
2272 2435 2.186125 GACACGACCCCGAATCCC 59.814 66.667 0.00 0.00 39.50 3.85
2273 2436 1.039233 TAGGACACGACCCCGAATCC 61.039 60.000 0.00 0.00 40.83 3.01
2274 2437 0.384669 CTAGGACACGACCCCGAATC 59.615 60.000 0.00 0.00 39.50 2.52
2275 2438 1.041447 CCTAGGACACGACCCCGAAT 61.041 60.000 1.05 0.00 39.50 3.34
2276 2439 1.679977 CCTAGGACACGACCCCGAA 60.680 63.158 1.05 0.00 39.50 4.30
2277 2440 1.929860 ATCCTAGGACACGACCCCGA 61.930 60.000 15.42 0.00 39.50 5.14
2278 2441 1.455217 ATCCTAGGACACGACCCCG 60.455 63.158 15.42 0.00 42.50 5.73
2279 2442 2.029307 GCATCCTAGGACACGACCCC 62.029 65.000 15.42 0.00 0.00 4.95
2280 2443 1.442148 GCATCCTAGGACACGACCC 59.558 63.158 15.42 0.00 0.00 4.46
2281 2444 1.065928 CGCATCCTAGGACACGACC 59.934 63.158 24.33 5.93 0.00 4.79
2282 2445 1.065928 CCGCATCCTAGGACACGAC 59.934 63.158 28.29 11.24 0.00 4.34
2283 2446 1.379443 ACCGCATCCTAGGACACGA 60.379 57.895 28.29 3.31 0.00 4.35
2284 2447 1.226974 CACCGCATCCTAGGACACG 60.227 63.158 22.54 22.54 0.00 4.49
2285 2448 0.103208 CTCACCGCATCCTAGGACAC 59.897 60.000 15.42 8.28 0.00 3.67
2286 2449 1.676678 GCTCACCGCATCCTAGGACA 61.677 60.000 15.42 0.00 38.92 4.02
2287 2450 1.068250 GCTCACCGCATCCTAGGAC 59.932 63.158 15.42 0.72 38.92 3.85
2288 2451 2.490148 CGCTCACCGCATCCTAGGA 61.490 63.158 15.46 15.46 39.08 2.94
2289 2452 2.028190 CGCTCACCGCATCCTAGG 59.972 66.667 0.82 0.82 39.08 3.02
2314 2477 1.267806 CATGATAGGGCAAACGGATGC 59.732 52.381 6.17 6.17 45.67 3.91
2315 2478 2.549754 GACATGATAGGGCAAACGGATG 59.450 50.000 0.00 0.00 0.00 3.51
2316 2479 2.487265 GGACATGATAGGGCAAACGGAT 60.487 50.000 0.00 0.00 0.00 4.18
2317 2480 1.134220 GGACATGATAGGGCAAACGGA 60.134 52.381 0.00 0.00 0.00 4.69
2318 2481 1.308998 GGACATGATAGGGCAAACGG 58.691 55.000 0.00 0.00 0.00 4.44
2319 2482 0.937304 CGGACATGATAGGGCAAACG 59.063 55.000 0.00 0.00 0.00 3.60
2320 2483 0.663153 GCGGACATGATAGGGCAAAC 59.337 55.000 0.00 0.00 0.00 2.93
2321 2484 0.813610 CGCGGACATGATAGGGCAAA 60.814 55.000 0.00 0.00 0.00 3.68
2322 2485 1.227527 CGCGGACATGATAGGGCAA 60.228 57.895 0.00 0.00 0.00 4.52
2323 2486 2.363711 GACGCGGACATGATAGGGCA 62.364 60.000 12.47 0.00 0.00 5.36
2324 2487 1.664965 GACGCGGACATGATAGGGC 60.665 63.158 12.47 0.00 0.00 5.19
2325 2488 1.244816 TAGACGCGGACATGATAGGG 58.755 55.000 12.47 0.55 0.00 3.53
2326 2489 3.577649 AATAGACGCGGACATGATAGG 57.422 47.619 12.47 0.00 0.00 2.57
2327 2490 8.683550 TTATTAAATAGACGCGGACATGATAG 57.316 34.615 12.47 0.00 0.00 2.08
2328 2491 9.478768 TTTTATTAAATAGACGCGGACATGATA 57.521 29.630 12.47 0.00 0.00 2.15
2329 2492 7.956420 TTTATTAAATAGACGCGGACATGAT 57.044 32.000 12.47 0.00 0.00 2.45
2330 2493 7.707464 TCTTTTATTAAATAGACGCGGACATGA 59.293 33.333 12.47 0.00 0.00 3.07
2331 2494 7.847487 TCTTTTATTAAATAGACGCGGACATG 58.153 34.615 12.47 0.00 0.00 3.21
2332 2495 7.709613 ACTCTTTTATTAAATAGACGCGGACAT 59.290 33.333 12.47 0.00 0.00 3.06
2333 2496 7.037438 ACTCTTTTATTAAATAGACGCGGACA 58.963 34.615 12.47 0.00 0.00 4.02
2334 2497 7.460751 ACTCTTTTATTAAATAGACGCGGAC 57.539 36.000 12.47 3.93 0.00 4.79
2335 2498 9.023967 GTTACTCTTTTATTAAATAGACGCGGA 57.976 33.333 12.47 0.00 0.00 5.54
2336 2499 7.994894 CGTTACTCTTTTATTAAATAGACGCGG 59.005 37.037 12.47 0.00 0.00 6.46
2337 2500 8.526681 ACGTTACTCTTTTATTAAATAGACGCG 58.473 33.333 3.53 3.53 29.00 6.01
2347 2510 9.615295 GGCATTTGAAACGTTACTCTTTTATTA 57.385 29.630 0.00 0.00 0.00 0.98
2348 2511 8.357402 AGGCATTTGAAACGTTACTCTTTTATT 58.643 29.630 0.00 0.00 0.00 1.40
2349 2512 7.882179 AGGCATTTGAAACGTTACTCTTTTAT 58.118 30.769 0.00 0.00 0.00 1.40
2350 2513 7.266922 AGGCATTTGAAACGTTACTCTTTTA 57.733 32.000 0.00 0.00 0.00 1.52
2351 2514 6.144078 AGGCATTTGAAACGTTACTCTTTT 57.856 33.333 0.00 0.00 0.00 2.27
2352 2515 5.767816 AGGCATTTGAAACGTTACTCTTT 57.232 34.783 0.00 0.00 0.00 2.52
2353 2516 5.106673 GCTAGGCATTTGAAACGTTACTCTT 60.107 40.000 0.00 0.00 0.00 2.85
2354 2517 4.392138 GCTAGGCATTTGAAACGTTACTCT 59.608 41.667 0.00 0.00 0.00 3.24
2355 2518 4.436986 GGCTAGGCATTTGAAACGTTACTC 60.437 45.833 12.16 0.00 0.00 2.59
2356 2519 3.439129 GGCTAGGCATTTGAAACGTTACT 59.561 43.478 12.16 0.00 0.00 2.24
2357 2520 3.427098 GGGCTAGGCATTTGAAACGTTAC 60.427 47.826 19.14 0.00 0.00 2.50
2358 2521 2.750712 GGGCTAGGCATTTGAAACGTTA 59.249 45.455 19.14 0.00 0.00 3.18
2359 2522 1.544246 GGGCTAGGCATTTGAAACGTT 59.456 47.619 19.14 0.00 0.00 3.99
2360 2523 1.173913 GGGCTAGGCATTTGAAACGT 58.826 50.000 19.14 0.00 0.00 3.99
2361 2524 1.463674 AGGGCTAGGCATTTGAAACG 58.536 50.000 19.14 0.00 0.00 3.60
2362 2525 3.621558 ACTAGGGCTAGGCATTTGAAAC 58.378 45.455 19.14 0.00 37.49 2.78
2363 2526 4.263727 TGAACTAGGGCTAGGCATTTGAAA 60.264 41.667 19.14 0.00 37.49 2.69
2364 2527 3.265737 TGAACTAGGGCTAGGCATTTGAA 59.734 43.478 19.14 0.00 37.49 2.69
2365 2528 2.843730 TGAACTAGGGCTAGGCATTTGA 59.156 45.455 19.14 0.00 37.49 2.69
2366 2529 2.945668 GTGAACTAGGGCTAGGCATTTG 59.054 50.000 19.14 10.03 37.49 2.32
2367 2530 2.420129 CGTGAACTAGGGCTAGGCATTT 60.420 50.000 19.14 2.82 37.49 2.32
2368 2531 1.139058 CGTGAACTAGGGCTAGGCATT 59.861 52.381 19.14 8.16 37.49 3.56
2369 2532 0.753262 CGTGAACTAGGGCTAGGCAT 59.247 55.000 19.14 14.26 37.49 4.40
2370 2533 1.327690 CCGTGAACTAGGGCTAGGCA 61.328 60.000 19.14 0.00 37.49 4.75
2371 2534 1.442148 CCGTGAACTAGGGCTAGGC 59.558 63.158 8.00 8.00 37.49 3.93
2377 2540 1.258445 ACTGGAGCCGTGAACTAGGG 61.258 60.000 0.00 0.00 37.39 3.53
2378 2541 0.608640 AACTGGAGCCGTGAACTAGG 59.391 55.000 0.00 0.00 0.00 3.02
2379 2542 1.272490 TGAACTGGAGCCGTGAACTAG 59.728 52.381 0.00 0.00 0.00 2.57
2380 2543 1.334160 TGAACTGGAGCCGTGAACTA 58.666 50.000 0.00 0.00 0.00 2.24
2381 2544 0.687354 ATGAACTGGAGCCGTGAACT 59.313 50.000 0.00 0.00 0.00 3.01
2382 2545 1.079503 GATGAACTGGAGCCGTGAAC 58.920 55.000 0.00 0.00 0.00 3.18
2383 2546 0.684535 TGATGAACTGGAGCCGTGAA 59.315 50.000 0.00 0.00 0.00 3.18
2384 2547 0.037326 GTGATGAACTGGAGCCGTGA 60.037 55.000 0.00 0.00 0.00 4.35
2385 2548 1.354337 CGTGATGAACTGGAGCCGTG 61.354 60.000 0.00 0.00 0.00 4.94
2386 2549 1.079819 CGTGATGAACTGGAGCCGT 60.080 57.895 0.00 0.00 0.00 5.68
2387 2550 2.456119 GCGTGATGAACTGGAGCCG 61.456 63.158 0.00 0.00 0.00 5.52
2388 2551 1.078848 AGCGTGATGAACTGGAGCC 60.079 57.895 0.00 0.00 0.00 4.70
2389 2552 2.084844 CAGCGTGATGAACTGGAGC 58.915 57.895 0.00 0.00 0.00 4.70
2393 2556 0.110056 GTTGCCAGCGTGATGAACTG 60.110 55.000 0.00 0.00 0.00 3.16
2394 2557 0.534877 TGTTGCCAGCGTGATGAACT 60.535 50.000 0.00 0.00 0.00 3.01
2395 2558 0.310543 TTGTTGCCAGCGTGATGAAC 59.689 50.000 0.00 0.00 0.00 3.18
2396 2559 1.001487 CTTTGTTGCCAGCGTGATGAA 60.001 47.619 0.00 0.00 0.00 2.57
2397 2560 0.592637 CTTTGTTGCCAGCGTGATGA 59.407 50.000 0.00 0.00 0.00 2.92
2398 2561 1.005294 GCTTTGTTGCCAGCGTGATG 61.005 55.000 0.00 0.00 0.00 3.07
2399 2562 1.286880 GCTTTGTTGCCAGCGTGAT 59.713 52.632 0.00 0.00 0.00 3.06
2400 2563 2.721231 GCTTTGTTGCCAGCGTGA 59.279 55.556 0.00 0.00 0.00 4.35
2417 2580 4.814294 GGACGTGTAGGCCGCTGG 62.814 72.222 0.00 0.00 38.99 4.85
2423 2586 2.585247 GGCGATGGACGTGTAGGC 60.585 66.667 0.00 0.00 44.60 3.93
2424 2587 2.278596 CGGCGATGGACGTGTAGG 60.279 66.667 0.00 0.00 40.74 3.18
2425 2588 2.278596 CCGGCGATGGACGTGTAG 60.279 66.667 9.30 0.00 45.55 2.74
2426 2589 4.501714 GCCGGCGATGGACGTGTA 62.502 66.667 12.58 0.00 45.55 2.90
2429 2592 4.891727 GATGCCGGCGATGGACGT 62.892 66.667 23.90 0.00 45.55 4.34
2459 2622 3.368571 GGAGGCTGGCTGTGTTGC 61.369 66.667 9.06 0.00 0.00 4.17
2460 2623 1.108727 TTTGGAGGCTGGCTGTGTTG 61.109 55.000 9.06 0.00 0.00 3.33
2461 2624 0.396974 TTTTGGAGGCTGGCTGTGTT 60.397 50.000 9.06 0.00 0.00 3.32
2462 2625 0.178953 ATTTTGGAGGCTGGCTGTGT 60.179 50.000 9.06 0.00 0.00 3.72
2463 2626 0.245539 CATTTTGGAGGCTGGCTGTG 59.754 55.000 9.06 0.00 0.00 3.66
2464 2627 0.112995 TCATTTTGGAGGCTGGCTGT 59.887 50.000 9.06 0.00 0.00 4.40
2465 2628 1.259609 TTCATTTTGGAGGCTGGCTG 58.740 50.000 9.06 0.00 0.00 4.85
2466 2629 2.242882 ATTCATTTTGGAGGCTGGCT 57.757 45.000 2.24 2.24 0.00 4.75
2467 2630 3.026694 ACTATTCATTTTGGAGGCTGGC 58.973 45.455 0.00 0.00 0.00 4.85
2468 2631 4.463891 ACAACTATTCATTTTGGAGGCTGG 59.536 41.667 0.00 0.00 0.00 4.85
2469 2632 5.393461 GGACAACTATTCATTTTGGAGGCTG 60.393 44.000 0.00 0.00 0.00 4.85
2470 2633 4.706962 GGACAACTATTCATTTTGGAGGCT 59.293 41.667 0.00 0.00 0.00 4.58
2471 2634 4.706962 AGGACAACTATTCATTTTGGAGGC 59.293 41.667 0.00 0.00 0.00 4.70
2472 2635 5.065218 CGAGGACAACTATTCATTTTGGAGG 59.935 44.000 0.00 0.00 0.00 4.30
2473 2636 5.447818 GCGAGGACAACTATTCATTTTGGAG 60.448 44.000 0.00 0.00 0.00 3.86
2474 2637 4.394920 GCGAGGACAACTATTCATTTTGGA 59.605 41.667 0.00 0.00 0.00 3.53
2475 2638 4.438744 GGCGAGGACAACTATTCATTTTGG 60.439 45.833 0.00 0.00 0.00 3.28
2476 2639 4.662145 GGCGAGGACAACTATTCATTTTG 58.338 43.478 0.00 0.00 0.00 2.44
2477 2640 3.374058 CGGCGAGGACAACTATTCATTTT 59.626 43.478 0.00 0.00 0.00 1.82
2478 2641 2.936498 CGGCGAGGACAACTATTCATTT 59.064 45.455 0.00 0.00 0.00 2.32
2479 2642 2.550978 CGGCGAGGACAACTATTCATT 58.449 47.619 0.00 0.00 0.00 2.57
2480 2643 1.202533 CCGGCGAGGACAACTATTCAT 60.203 52.381 9.30 0.00 45.00 2.57
2481 2644 0.174845 CCGGCGAGGACAACTATTCA 59.825 55.000 9.30 0.00 45.00 2.57
2482 2645 1.152383 GCCGGCGAGGACAACTATTC 61.152 60.000 12.58 0.00 45.00 1.75
2483 2646 1.153429 GCCGGCGAGGACAACTATT 60.153 57.895 12.58 0.00 45.00 1.73
2484 2647 1.895020 TTGCCGGCGAGGACAACTAT 61.895 55.000 23.90 0.00 45.00 2.12
2485 2648 2.575893 TTGCCGGCGAGGACAACTA 61.576 57.895 23.90 0.00 45.00 2.24
2486 2649 3.936203 TTGCCGGCGAGGACAACT 61.936 61.111 23.90 0.00 45.00 3.16
2487 2650 3.723348 GTTGCCGGCGAGGACAAC 61.723 66.667 23.90 15.63 43.89 3.32
2488 2651 4.243008 TGTTGCCGGCGAGGACAA 62.243 61.111 23.90 6.19 45.00 3.18
2489 2652 4.980805 GTGTTGCCGGCGAGGACA 62.981 66.667 23.90 19.95 45.00 4.02
2490 2653 4.980805 TGTGTTGCCGGCGAGGAC 62.981 66.667 23.90 19.29 45.00 3.85
2491 2654 4.680237 CTGTGTTGCCGGCGAGGA 62.680 66.667 23.90 6.59 45.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.