AutoCloner

Multiple sequence alignment - TraesCS6D01G025800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6D01G025800	chr6D	100.000	3441	0	0	1	3441	9909011	9905571	0.000000e+00	6355.0
1	TraesCS6D01G025800	chr6D	78.261	322	53	9	3028	3343	37418187	37417877	1.260000e-44	191.0
2	TraesCS6D01G025800	chr6D	84.459	148	23	0	35	182	9908012	9907865	2.770000e-31	147.0
3	TraesCS6D01G025800	chr6D	84.459	148	23	0	1000	1147	9908977	9908830	2.770000e-31	147.0
4	TraesCS6D01G025800	chr6D	91.304	46	3	1	3085	3129	159234482	159234527	1.030000e-05	62.1
5	TraesCS6D01G025800	chr6B	92.483	2501	146	18	974	3441	18299934	18297443	0.000000e+00	3539.0
6	TraesCS6D01G025800	chr6B	91.943	1539	97	9	981	2496	18149658	18148124	0.000000e+00	2130.0
7	TraesCS6D01G025800	chr6B	90.959	365	17	5	2610	2962	18148125	18147765	8.640000e-131	477.0
8	TraesCS6D01G025800	chr6B	85.811	148	18	3	35	181	18324586	18324441	1.650000e-33	154.0
9	TraesCS6D01G025800	chrUn	91.216	1571	107	16	952	2496	71219435	71221000	0.000000e+00	2108.0
10	TraesCS6D01G025800	chrUn	91.655	1390	90	11	1130	2496	321359140	321360526	0.000000e+00	1901.0
11	TraesCS6D01G025800	chrUn	89.383	989	98	4	1503	2488	71181594	71182578	0.000000e+00	1238.0
12	TraesCS6D01G025800	chrUn	88.090	848	73	15	2610	3441	71263983	71263148	0.000000e+00	981.0
13	TraesCS6D01G025800	chrUn	95.722	561	21	3	1939	2496	71264542	71263982	0.000000e+00	900.0
14	TraesCS6D01G025800	chrUn	85.981	642	71	14	972	1600	71180957	71181592	0.000000e+00	669.0
15	TraesCS6D01G025800	chrUn	91.476	481	26	4	1448	1913	71265020	71264540	0.000000e+00	647.0
16	TraesCS6D01G025800	chrUn	89.419	482	37	7	2610	3078	71220999	71221479	2.290000e-166	595.0
17	TraesCS6D01G025800	chrUn	89.419	482	37	7	2610	3078	321360525	321361005	2.290000e-166	595.0
18	TraesCS6D01G025800	chrUn	91.198	409	34	2	981	1388	71265428	71265021	3.880000e-154	555.0
19	TraesCS6D01G025800	chrUn	87.528	449	22	8	207	631	71185497	71185935	3.990000e-134	488.0
20	TraesCS6D01G025800	chrUn	81.136	440	76	5	1000	1435	172238039	172237603	2.540000e-91	346.0
21	TraesCS6D01G025800	chrUn	94.286	210	6	1	1	204	71183911	71184120	1.990000e-82	316.0
22	TraesCS6D01G025800	chrUn	81.519	395	64	5	996	1383	71183948	71184340	1.990000e-82	316.0
23	TraesCS6D01G025800	chrUn	94.286	210	6	1	1	204	71199717	71199508	1.990000e-82	316.0
24	TraesCS6D01G025800	chrUn	77.743	319	53	14	315	622	71182589	71182900	2.730000e-41	180.0
25	TraesCS6D01G025800	chrUn	85.906	149	21	0	34	182	71180982	71181130	3.550000e-35	159.0
26	TraesCS6D01G025800	chrUn	84.568	162	19	2	34	189	172238040	172237879	4.600000e-34	156.0
27	TraesCS6D01G025800	chrUn	92.593	108	8	0	522	629	471500027	471500134	4.600000e-34	156.0
28	TraesCS6D01G025800	chrUn	89.600	125	4	3	206	330	266227865	266227750	2.140000e-32	150.0
29	TraesCS6D01G025800	chrUn	89.600	125	4	3	206	330	326274059	326274174	2.140000e-32	150.0
30	TraesCS6D01G025800	chrUn	83.740	123	19	1	30	152	289050176	289050297	7.800000e-22	115.0
31	TraesCS6D01G025800	chrUn	84.375	96	13	2	84	178	71221728	71221822	3.660000e-15	93.5
32	TraesCS6D01G025800	chr6A	87.471	1293	146	11	1085	2364	11434090	11432801	0.000000e+00	1476.0
33	TraesCS6D01G025800	chr6A	79.737	913	168	9	1538	2446	11115559	11114660	0.000000e+00	645.0
34	TraesCS6D01G025800	chr6A	81.818	440	73	5	1000	1435	11116364	11115928	2.520000e-96	363.0
35	TraesCS6D01G025800	chr6A	84.259	324	21	6	202	505	11413909	11413596	4.340000e-74	289.0
36	TraesCS6D01G025800	chr6A	78.221	326	54	12	315	629	11417100	11416781	3.500000e-45	193.0
37	TraesCS6D01G025800	chr6A	91.241	137	9	1	2355	2488	11417247	11417111	2.110000e-42	183.0
38	TraesCS6D01G025800	chr6A	85.185	162	18	2	34	189	11116365	11116204	9.880000e-36	161.0
39	TraesCS6D01G025800	chr6A	88.983	118	13	0	2494	2611	616884145	616884028	2.770000e-31	147.0
40	TraesCS6D01G025800	chr4A	75.112	892	193	16	1536	2408	733559649	733558768	1.160000e-104	390.0
41	TraesCS6D01G025800	chr4A	88.889	117	13	0	2495	2611	544199321	544199437	9.950000e-31	145.0
42	TraesCS6D01G025800	chr5D	80.473	338	44	17	3001	3327	539865359	539865033	4.440000e-59	239.0
43	TraesCS6D01G025800	chr7B	90.598	117	11	0	2495	2611	513813814	513813930	4.600000e-34	156.0
44	TraesCS6D01G025800	chr7B	89.831	118	12	0	2495	2612	3793917	3793800	5.950000e-33	152.0
45	TraesCS6D01G025800	chr2D	89.344	122	13	0	2490	2611	172575834	172575955	1.650000e-33	154.0
46	TraesCS6D01G025800	chr5B	88.889	117	13	0	2495	2611	644257470	644257354	9.950000e-31	145.0
47	TraesCS6D01G025800	chr2B	88.889	117	13	0	2495	2611	89499065	89498949	9.950000e-31	145.0
48	TraesCS6D01G025800	chr2B	86.400	125	16	1	2487	2611	578045017	578044894	5.990000e-28	135.0
49	TraesCS6D01G025800	chr3D	82.353	85	14	1	3046	3130	107439669	107439586	4.760000e-09	73.1
50	TraesCS6D01G025800	chr5A	80.233	86	15	2	3028	3112	14990140	14990224	2.870000e-06	63.9

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6D01G025800	chr6D	9905571	9909011	3440	True	2216.333333	6355	89.639333	1	3441	3	chr6D.!!$R2	3440
1	TraesCS6D01G025800	chr6B	18297443	18299934	2491	True	3539.000000	3539	92.483000	974	3441	1	chr6B.!!$R1	2467
2	TraesCS6D01G025800	chr6B	18147765	18149658	1893	True	1303.500000	2130	91.451000	981	2962	2	chr6B.!!$R3	1981
3	TraesCS6D01G025800	chrUn	321359140	321361005	1865	False	1248.000000	1901	90.537000	1130	3078	2	chrUn.!!$F6	1948
4	TraesCS6D01G025800	chrUn	71219435	71221822	2387	False	932.166667	2108	88.336667	84	3078	3	chrUn.!!$F5	2994
5	TraesCS6D01G025800	chrUn	71263148	71265428	2280	True	770.750000	981	91.621500	981	3441	4	chrUn.!!$R3	2460
6	TraesCS6D01G025800	chrUn	71180957	71185935	4978	False	480.857143	1238	86.049429	1	2488	7	chrUn.!!$F4	2487
7	TraesCS6D01G025800	chr6A	11432801	11434090	1289	True	1476.000000	1476	87.471000	1085	2364	1	chr6A.!!$R1	1279
8	TraesCS6D01G025800	chr6A	11114660	11116365	1705	True	389.666667	645	82.246667	34	2446	3	chr6A.!!$R3	2412
9	TraesCS6D01G025800	chr6A	11413596	11417247	3651	True	221.666667	289	84.573667	202	2488	3	chr6A.!!$R4	2286
10	TraesCS6D01G025800	chr4A	733558768	733559649	881	True	390.000000	390	75.112000	1536	2408	1	chr4A.!!$R1	872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
523	543	0.034616	AGTCCTTGTGCTCTGTCTGC	59.965	55.0	0.0	0.0	0.0	4.26	F
743	1067	0.035881	ACACTGACAGGAGCATGGTG	59.964	55.0	0.0	0.0	0.0	4.17	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1786	3372	0.031585	CAACCTCGTTGACGACTGGA	59.968	55.0	15.89	0.0	45.28	3.86	R
2600	4337	0.974383	ACAAACACCTACTCCCTCCG	59.026	55.0	0.00	0.0	0.00	4.63	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	3.245518	GAAGAACTGAAGGGAGAGAGC	57.754	52.381	0.00	0.00	0.00	4.09
21	22	2.317371	AGAACTGAAGGGAGAGAGCA	57.683	50.000	0.00	0.00	0.00	4.26
25	26	2.614259	ACTGAAGGGAGAGAGCAAGAA	58.386	47.619	0.00	0.00	0.00	2.52
26	27	2.975489	ACTGAAGGGAGAGAGCAAGAAA	59.025	45.455	0.00	0.00	0.00	2.52
28	29	2.705658	TGAAGGGAGAGAGCAAGAAACA	59.294	45.455	0.00	0.00	0.00	2.83
29	30	3.136443	TGAAGGGAGAGAGCAAGAAACAA	59.864	43.478	0.00	0.00	0.00	2.83
30	31	3.133141	AGGGAGAGAGCAAGAAACAAC	57.867	47.619	0.00	0.00	0.00	3.32
31	32	2.708325	AGGGAGAGAGCAAGAAACAACT	59.292	45.455	0.00	0.00	0.00	3.16
35	36	4.051922	GAGAGAGCAAGAAACAACTCGAA	58.948	43.478	0.00	0.00	34.31	3.71
37	38	4.450419	AGAGAGCAAGAAACAACTCGAATG	59.550	41.667	0.00	0.00	34.31	2.67
38	39	3.499918	AGAGCAAGAAACAACTCGAATGG	59.500	43.478	3.25	0.00	34.31	3.16
39	40	2.030805	AGCAAGAAACAACTCGAATGGC	60.031	45.455	3.25	0.00	0.00	4.40
40	41	2.922335	GCAAGAAACAACTCGAATGGCC	60.922	50.000	0.00	0.00	0.00	5.36
42	43	0.168128	GAAACAACTCGAATGGCCGG	59.832	55.000	0.00	0.00	0.00	6.13
43	44	0.536460	AAACAACTCGAATGGCCGGT	60.536	50.000	1.90	0.00	0.00	5.28
44	45	1.234615	AACAACTCGAATGGCCGGTG	61.235	55.000	1.90	0.00	0.00	4.94
45	46	1.375396	CAACTCGAATGGCCGGTGA	60.375	57.895	1.90	0.00	0.00	4.02
46	47	1.079127	AACTCGAATGGCCGGTGAG	60.079	57.895	1.90	11.28	0.00	3.51
48	49	2.682136	TCGAATGGCCGGTGAGGA	60.682	61.111	1.90	0.00	45.00	3.71
49	50	2.238847	CTCGAATGGCCGGTGAGGAA	62.239	60.000	1.90	0.00	45.00	3.36
51	52	1.602237	GAATGGCCGGTGAGGAAGA	59.398	57.895	1.90	0.00	45.00	2.87
52	53	0.462759	GAATGGCCGGTGAGGAAGAG	60.463	60.000	1.90	0.00	45.00	2.85
53	54	1.915078	AATGGCCGGTGAGGAAGAGG	61.915	60.000	1.90	0.00	45.00	3.69
54	55	3.003763	GGCCGGTGAGGAAGAGGT	61.004	66.667	1.90	0.00	45.00	3.85
55	56	2.266055	GCCGGTGAGGAAGAGGTG	59.734	66.667	1.90	0.00	45.00	4.00
58	59	1.079543	CGGTGAGGAAGAGGTGCAG	60.080	63.158	0.00	0.00	0.00	4.41
59	60	1.298014	GGTGAGGAAGAGGTGCAGG	59.702	63.158	0.00	0.00	0.00	4.85
61	62	0.321122	GTGAGGAAGAGGTGCAGGTG	60.321	60.000	0.00	0.00	0.00	4.00
62	63	1.298014	GAGGAAGAGGTGCAGGTGG	59.702	63.158	0.00	0.00	0.00	4.61
63	64	1.462238	AGGAAGAGGTGCAGGTGGT	60.462	57.895	0.00	0.00	0.00	4.16
65	66	0.250513	GGAAGAGGTGCAGGTGGTAG	59.749	60.000	0.00	0.00	0.00	3.18
67	68	1.205893	GAAGAGGTGCAGGTGGTAGAG	59.794	57.143	0.00	0.00	0.00	2.43
68	69	0.115349	AGAGGTGCAGGTGGTAGAGT	59.885	55.000	0.00	0.00	0.00	3.24
69	70	0.533032	GAGGTGCAGGTGGTAGAGTC	59.467	60.000	0.00	0.00	0.00	3.36
70	71	0.905337	AGGTGCAGGTGGTAGAGTCC	60.905	60.000	0.00	0.00	0.00	3.85
71	72	1.192146	GGTGCAGGTGGTAGAGTCCA	61.192	60.000	0.00	0.00	34.85	4.02
72	73	0.247736	GTGCAGGTGGTAGAGTCCAG	59.752	60.000	0.00	0.00	38.23	3.86
77	78	3.723554	GTGGTAGAGTCCAGCTTCG	57.276	57.895	0.00	0.00	38.23	3.79
79	80	2.089980	GTGGTAGAGTCCAGCTTCGTA	58.910	52.381	0.00	0.00	38.23	3.43
80	81	2.490903	GTGGTAGAGTCCAGCTTCGTAA	59.509	50.000	0.00	0.00	38.23	3.18
81	82	2.490903	TGGTAGAGTCCAGCTTCGTAAC	59.509	50.000	0.00	0.00	33.19	2.50
82	83	2.477525	GGTAGAGTCCAGCTTCGTAACG	60.478	54.545	0.00	0.00	0.00	3.18
83	84	0.109226	AGAGTCCAGCTTCGTAACGC	60.109	55.000	0.00	0.00	0.00	4.84
84	85	1.077089	GAGTCCAGCTTCGTAACGCC	61.077	60.000	0.00	0.00	0.00	5.68
85	86	2.126228	TCCAGCTTCGTAACGCCG	60.126	61.111	0.00	0.00	0.00	6.46
86	87	3.186047	CCAGCTTCGTAACGCCGG	61.186	66.667	0.00	0.00	0.00	6.13
87	88	3.849953	CAGCTTCGTAACGCCGGC	61.850	66.667	19.07	19.07	0.00	6.13
108	109	3.119096	GGACACGCCGAGGAAAGC	61.119	66.667	0.00	0.00	0.00	3.51
113	114	2.279517	CGCCGAGGAAAGCGCTAT	60.280	61.111	12.05	0.00	46.50	2.97
114	115	2.589492	CGCCGAGGAAAGCGCTATG	61.589	63.158	12.05	0.00	46.50	2.23
115	116	2.247437	GCCGAGGAAAGCGCTATGG	61.247	63.158	12.05	7.76	0.00	2.74
116	117	2.247437	CCGAGGAAAGCGCTATGGC	61.247	63.158	12.05	0.00	0.00	4.40
118	119	1.218230	CGAGGAAAGCGCTATGGCTC	61.218	60.000	12.05	2.40	43.93	4.70
119	120	0.105778	GAGGAAAGCGCTATGGCTCT	59.894	55.000	12.05	2.57	43.93	4.09
120	121	0.105778	AGGAAAGCGCTATGGCTCTC	59.894	55.000	12.05	0.00	43.93	3.20
121	122	1.218230	GGAAAGCGCTATGGCTCTCG	61.218	60.000	12.05	0.00	43.93	4.04
122	123	1.218230	GAAAGCGCTATGGCTCTCGG	61.218	60.000	12.05	0.00	43.93	4.63
123	124	3.798954	AAGCGCTATGGCTCTCGGC	62.799	63.158	12.05	0.00	43.93	5.54
130	131	3.749064	TGGCTCTCGGCACTCGAC	61.749	66.667	0.00	0.00	43.74	4.20
131	132	4.500116	GGCTCTCGGCACTCGACC	62.500	72.222	0.00	0.00	43.74	4.79
132	133	3.444805	GCTCTCGGCACTCGACCT	61.445	66.667	0.00	0.00	43.74	3.85
133	134	2.795297	CTCTCGGCACTCGACCTC	59.205	66.667	0.00	0.00	43.74	3.85
134	135	2.033602	TCTCGGCACTCGACCTCA	59.966	61.111	0.00	0.00	43.74	3.86
135	136	1.378646	TCTCGGCACTCGACCTCAT	60.379	57.895	0.00	0.00	43.74	2.90
136	137	1.226802	CTCGGCACTCGACCTCATG	60.227	63.158	0.00	0.00	43.74	3.07
137	138	2.887568	CGGCACTCGACCTCATGC	60.888	66.667	0.00	0.00	42.43	4.06
138	139	2.581354	GGCACTCGACCTCATGCT	59.419	61.111	0.00	0.00	38.18	3.79
139	140	1.816537	GGCACTCGACCTCATGCTA	59.183	57.895	0.00	0.00	38.18	3.49
140	141	0.249238	GGCACTCGACCTCATGCTAG	60.249	60.000	0.00	0.00	38.18	3.42
141	142	0.873743	GCACTCGACCTCATGCTAGC	60.874	60.000	8.10	8.10	35.16	3.42
142	143	0.249238	CACTCGACCTCATGCTAGCC	60.249	60.000	13.29	0.00	0.00	3.93
143	144	0.684479	ACTCGACCTCATGCTAGCCA	60.684	55.000	13.29	0.24	0.00	4.75
144	145	0.461548	CTCGACCTCATGCTAGCCAA	59.538	55.000	13.29	0.00	0.00	4.52
145	146	0.175760	TCGACCTCATGCTAGCCAAC	59.824	55.000	13.29	0.00	0.00	3.77
146	147	0.108186	CGACCTCATGCTAGCCAACA	60.108	55.000	13.29	0.00	0.00	3.33
147	148	1.661341	GACCTCATGCTAGCCAACAG	58.339	55.000	13.29	2.72	0.00	3.16
148	149	1.208052	GACCTCATGCTAGCCAACAGA	59.792	52.381	13.29	2.05	0.00	3.41
149	150	1.209019	ACCTCATGCTAGCCAACAGAG	59.791	52.381	13.29	11.39	0.00	3.35
150	151	1.474677	CCTCATGCTAGCCAACAGAGG	60.475	57.143	13.29	16.14	35.87	3.69
159	160	1.299976	CCAACAGAGGCTACACCCC	59.700	63.158	0.00	0.00	40.58	4.95
160	161	1.079127	CAACAGAGGCTACACCCCG	60.079	63.158	0.00	0.00	40.58	5.73
161	162	2.955881	AACAGAGGCTACACCCCGC	61.956	63.158	0.00	0.00	40.58	6.13
162	163	3.077556	CAGAGGCTACACCCCGCT	61.078	66.667	0.00	0.00	40.58	5.52
163	164	2.760385	AGAGGCTACACCCCGCTC	60.760	66.667	0.00	0.00	40.58	5.03
164	165	4.208686	GAGGCTACACCCCGCTCG	62.209	72.222	0.00	0.00	40.58	5.03
166	167	4.078516	GGCTACACCCCGCTCGTT	62.079	66.667	0.00	0.00	0.00	3.85
167	168	2.508663	GCTACACCCCGCTCGTTC	60.509	66.667	0.00	0.00	0.00	3.95
168	169	2.967397	CTACACCCCGCTCGTTCA	59.033	61.111	0.00	0.00	0.00	3.18
169	170	1.515954	CTACACCCCGCTCGTTCAT	59.484	57.895	0.00	0.00	0.00	2.57
170	171	0.108329	CTACACCCCGCTCGTTCATT	60.108	55.000	0.00	0.00	0.00	2.57
171	172	0.322322	TACACCCCGCTCGTTCATTT	59.678	50.000	0.00	0.00	0.00	2.32
172	173	0.953960	ACACCCCGCTCGTTCATTTC	60.954	55.000	0.00	0.00	0.00	2.17
173	174	0.673644	CACCCCGCTCGTTCATTTCT	60.674	55.000	0.00	0.00	0.00	2.52
174	175	0.899720	ACCCCGCTCGTTCATTTCTA	59.100	50.000	0.00	0.00	0.00	2.10
175	176	1.287425	CCCCGCTCGTTCATTTCTAC	58.713	55.000	0.00	0.00	0.00	2.59
176	177	1.287425	CCCGCTCGTTCATTTCTACC	58.713	55.000	0.00	0.00	0.00	3.18
177	178	0.921347	CCGCTCGTTCATTTCTACCG	59.079	55.000	0.00	0.00	0.00	4.02
178	179	1.625616	CGCTCGTTCATTTCTACCGT	58.374	50.000	0.00	0.00	0.00	4.83
179	180	1.582502	CGCTCGTTCATTTCTACCGTC	59.417	52.381	0.00	0.00	0.00	4.79
180	181	1.582502	GCTCGTTCATTTCTACCGTCG	59.417	52.381	0.00	0.00	0.00	5.12
181	182	2.730090	GCTCGTTCATTTCTACCGTCGA	60.730	50.000	0.00	0.00	0.00	4.20
182	183	3.692576	CTCGTTCATTTCTACCGTCGAT	58.307	45.455	0.00	0.00	0.00	3.59
183	184	3.431856	TCGTTCATTTCTACCGTCGATG	58.568	45.455	0.00	0.00	0.00	3.84
184	185	3.119743	TCGTTCATTTCTACCGTCGATGT	60.120	43.478	3.52	0.00	0.00	3.06
185	186	3.239941	CGTTCATTTCTACCGTCGATGTC	59.760	47.826	3.52	0.00	0.00	3.06
186	187	3.431922	TCATTTCTACCGTCGATGTCC	57.568	47.619	3.52	0.00	0.00	4.02
187	188	2.100252	TCATTTCTACCGTCGATGTCCC	59.900	50.000	3.52	0.00	0.00	4.46
188	189	0.452987	TTTCTACCGTCGATGTCCCG	59.547	55.000	3.52	0.00	0.00	5.14
189	190	1.378882	TTCTACCGTCGATGTCCCGG	61.379	60.000	9.62	9.62	46.93	5.73
190	191	3.480225	CTACCGTCGATGTCCCGGC	62.480	68.421	10.96	0.00	45.49	6.13
196	197	4.444838	CGATGTCCCGGCACCGAA	62.445	66.667	11.42	0.00	42.83	4.30
197	198	2.046700	GATGTCCCGGCACCGAAA	60.047	61.111	11.42	0.00	42.83	3.46
198	199	2.359478	ATGTCCCGGCACCGAAAC	60.359	61.111	11.42	8.62	42.83	2.78
199	200	3.912745	ATGTCCCGGCACCGAAACC	62.913	63.158	11.42	0.00	42.83	3.27
200	201	4.629523	GTCCCGGCACCGAAACCA	62.630	66.667	11.42	0.00	42.83	3.67
201	202	4.629523	TCCCGGCACCGAAACCAC	62.630	66.667	11.42	0.00	42.83	4.16
210	211	2.259204	CGAAACCACCGCGGACTA	59.741	61.111	35.90	0.00	38.63	2.59
211	212	1.153706	CGAAACCACCGCGGACTAT	60.154	57.895	35.90	13.80	38.63	2.12
212	213	0.738412	CGAAACCACCGCGGACTATT	60.738	55.000	35.90	20.67	38.63	1.73
213	214	1.469595	CGAAACCACCGCGGACTATTA	60.470	52.381	35.90	0.00	38.63	0.98
214	215	2.800629	CGAAACCACCGCGGACTATTAT	60.801	50.000	35.90	11.38	38.63	1.28
215	216	2.994186	AACCACCGCGGACTATTATT	57.006	45.000	35.90	12.64	38.63	1.40
216	217	2.994186	ACCACCGCGGACTATTATTT	57.006	45.000	35.90	1.64	38.63	1.40
217	218	3.271055	ACCACCGCGGACTATTATTTT	57.729	42.857	35.90	0.68	38.63	1.82
218	219	2.940410	ACCACCGCGGACTATTATTTTG	59.060	45.455	35.90	15.40	38.63	2.44
219	220	3.199677	CCACCGCGGACTATTATTTTGA	58.800	45.455	35.90	0.00	36.56	2.69
220	221	3.813166	CCACCGCGGACTATTATTTTGAT	59.187	43.478	35.90	0.00	36.56	2.57
221	222	4.319477	CCACCGCGGACTATTATTTTGATG	60.319	45.833	35.90	14.11	36.56	3.07
222	223	3.813166	ACCGCGGACTATTATTTTGATGG	59.187	43.478	35.90	0.00	0.00	3.51
223	224	3.813166	CCGCGGACTATTATTTTGATGGT	59.187	43.478	24.07	0.00	0.00	3.55
224	225	4.084013	CCGCGGACTATTATTTTGATGGTC	60.084	45.833	24.07	0.00	35.13	4.02
225	226	4.750098	CGCGGACTATTATTTTGATGGTCT	59.250	41.667	0.00	0.00	35.89	3.85
226	227	5.107453	CGCGGACTATTATTTTGATGGTCTC	60.107	44.000	0.00	0.00	35.89	3.36
227	228	5.992217	GCGGACTATTATTTTGATGGTCTCT	59.008	40.000	0.00	0.00	35.89	3.10
228	229	7.152645	GCGGACTATTATTTTGATGGTCTCTA	58.847	38.462	0.00	0.00	35.89	2.43
229	230	7.819900	GCGGACTATTATTTTGATGGTCTCTAT	59.180	37.037	0.00	0.00	35.89	1.98
230	231	9.360093	CGGACTATTATTTTGATGGTCTCTATC	57.640	37.037	0.00	0.00	35.89	2.08
231	232	9.360093	GGACTATTATTTTGATGGTCTCTATCG	57.640	37.037	0.00	0.00	35.89	2.92
261	262	9.503399	AATATAATTACAGTTAGCCACTTAGCC	57.497	33.333	0.00	0.00	30.92	3.93
262	263	5.437191	AATTACAGTTAGCCACTTAGCCT	57.563	39.130	0.00	0.00	30.92	4.58
263	264	6.555463	AATTACAGTTAGCCACTTAGCCTA	57.445	37.500	0.00	0.00	30.92	3.93
264	265	5.593679	TTACAGTTAGCCACTTAGCCTAG	57.406	43.478	0.00	0.00	30.92	3.02
265	266	3.709587	ACAGTTAGCCACTTAGCCTAGA	58.290	45.455	0.00	0.00	30.92	2.43
266	267	4.290942	ACAGTTAGCCACTTAGCCTAGAT	58.709	43.478	0.00	0.00	30.92	1.98
267	268	4.342665	ACAGTTAGCCACTTAGCCTAGATC	59.657	45.833	0.00	0.00	30.92	2.75
268	269	4.342378	CAGTTAGCCACTTAGCCTAGATCA	59.658	45.833	0.00	0.00	30.92	2.92
269	270	4.962995	AGTTAGCCACTTAGCCTAGATCAA	59.037	41.667	0.00	0.00	27.32	2.57
270	271	5.425539	AGTTAGCCACTTAGCCTAGATCAAA	59.574	40.000	0.00	0.00	27.32	2.69
271	272	6.100424	AGTTAGCCACTTAGCCTAGATCAAAT	59.900	38.462	0.00	0.00	27.32	2.32
272	273	7.290248	AGTTAGCCACTTAGCCTAGATCAAATA	59.710	37.037	0.00	0.00	27.32	1.40
273	274	6.500589	AGCCACTTAGCCTAGATCAAATAA	57.499	37.500	0.00	0.00	0.00	1.40
274	275	7.084268	AGCCACTTAGCCTAGATCAAATAAT	57.916	36.000	0.00	0.00	0.00	1.28
275	276	7.521669	AGCCACTTAGCCTAGATCAAATAATT	58.478	34.615	0.00	0.00	0.00	1.40
276	277	8.001292	AGCCACTTAGCCTAGATCAAATAATTT	58.999	33.333	0.00	0.00	0.00	1.82
277	278	8.633561	GCCACTTAGCCTAGATCAAATAATTTT	58.366	33.333	0.00	0.00	0.00	1.82
284	285	8.854117	AGCCTAGATCAAATAATTTTCATGTCC	58.146	33.333	0.00	0.00	0.00	4.02
285	286	8.084684	GCCTAGATCAAATAATTTTCATGTCCC	58.915	37.037	0.00	0.00	0.00	4.46
286	287	8.292448	CCTAGATCAAATAATTTTCATGTCCCG	58.708	37.037	0.00	0.00	0.00	5.14
287	288	7.042797	AGATCAAATAATTTTCATGTCCCGG	57.957	36.000	0.00	0.00	0.00	5.73
288	289	6.833416	AGATCAAATAATTTTCATGTCCCGGA	59.167	34.615	0.73	0.00	0.00	5.14
296	297	1.634960	TCATGTCCCGGAGTGTGTTA	58.365	50.000	0.73	0.00	0.00	2.41
298	299	1.275291	CATGTCCCGGAGTGTGTTAGT	59.725	52.381	0.73	0.00	0.00	2.24
315	316	4.450757	TGTTAGTGACACGGATGTTTGATG	59.549	41.667	0.00	0.00	39.95	3.07
326	327	4.379394	CGGATGTTTGATGTTTGTACCCTG	60.379	45.833	0.00	0.00	0.00	4.45
327	328	4.764823	GGATGTTTGATGTTTGTACCCTGA	59.235	41.667	0.00	0.00	0.00	3.86
328	329	5.418840	GGATGTTTGATGTTTGTACCCTGAT	59.581	40.000	0.00	0.00	0.00	2.90
329	330	6.071391	GGATGTTTGATGTTTGTACCCTGATT	60.071	38.462	0.00	0.00	0.00	2.57
344	363	8.271458	TGTACCCTGATTAATAATCTGAAGCAA	58.729	33.333	17.76	2.52	38.64	3.91
370	389	7.232127	ACTTATGCTAGGCTTATGCAATTGAAT	59.768	33.333	10.34	6.94	40.24	2.57
372	391	6.224665	TGCTAGGCTTATGCAATTGAATTT	57.775	33.333	10.34	0.00	41.91	1.82
374	393	7.202526	TGCTAGGCTTATGCAATTGAATTTAC	58.797	34.615	10.34	0.00	41.91	2.01
385	404	6.071952	TGCAATTGAATTTACTCCTTCTGGTC	60.072	38.462	10.34	0.00	34.23	4.02
386	405	6.151817	GCAATTGAATTTACTCCTTCTGGTCT	59.848	38.462	10.34	0.00	34.23	3.85
387	406	7.533426	CAATTGAATTTACTCCTTCTGGTCTG	58.467	38.462	0.00	0.00	34.23	3.51
390	409	5.046304	TGAATTTACTCCTTCTGGTCTGAGG	60.046	44.000	0.00	0.00	34.23	3.86
392	411	4.669866	TTACTCCTTCTGGTCTGAGGTA	57.330	45.455	0.00	0.00	34.23	3.08
421	440	1.276421	AGTAGTTGCTCGTGGAATGCT	59.724	47.619	0.00	0.00	0.00	3.79
422	441	1.661112	GTAGTTGCTCGTGGAATGCTC	59.339	52.381	0.00	0.00	0.00	4.26
423	442	0.035317	AGTTGCTCGTGGAATGCTCA	59.965	50.000	0.00	0.00	0.00	4.26
437	457	5.221402	TGGAATGCTCAATTTGTTTAGTGCA	60.221	36.000	0.00	0.00	0.00	4.57
438	458	5.346822	GGAATGCTCAATTTGTTTAGTGCAG	59.653	40.000	0.00	0.00	32.65	4.41
440	460	6.573664	ATGCTCAATTTGTTTAGTGCAGTA	57.426	33.333	0.00	0.00	32.65	2.74
444	464	7.138736	GCTCAATTTGTTTAGTGCAGTAAAGA	58.861	34.615	23.85	20.58	0.00	2.52
448	468	9.515020	CAATTTGTTTAGTGCAGTAAAGAGAAA	57.485	29.630	23.85	20.82	0.00	2.52
476	496	6.995511	TCTAATGAAATGGACTTTTACGGG	57.004	37.500	0.00	0.00	0.00	5.28
477	497	4.450082	AATGAAATGGACTTTTACGGGC	57.550	40.909	0.00	0.00	0.00	6.13
478	498	3.149005	TGAAATGGACTTTTACGGGCT	57.851	42.857	0.00	0.00	0.00	5.19
479	499	4.289238	TGAAATGGACTTTTACGGGCTA	57.711	40.909	0.00	0.00	0.00	3.93
480	500	4.653868	TGAAATGGACTTTTACGGGCTAA	58.346	39.130	0.00	0.00	0.00	3.09
481	501	5.071370	TGAAATGGACTTTTACGGGCTAAA	58.929	37.500	0.00	0.00	0.00	1.85
482	502	5.182380	TGAAATGGACTTTTACGGGCTAAAG	59.818	40.000	0.00	0.00	37.38	1.85
485	505	3.014623	GGACTTTTACGGGCTAAAGCAT	58.985	45.455	4.07	0.00	44.36	3.79
487	507	4.082408	GGACTTTTACGGGCTAAAGCATTT	60.082	41.667	4.07	0.00	44.36	2.32
495	515	3.553922	CGGGCTAAAGCATTTTTGGTTCA	60.554	43.478	4.07	0.00	44.36	3.18
500	520	7.174080	GGGCTAAAGCATTTTTGGTTCATTTTA	59.826	33.333	4.07	0.00	44.36	1.52
516	536	7.755373	GGTTCATTTTATTTAGTCCTTGTGCTC	59.245	37.037	0.00	0.00	0.00	4.26
523	543	0.034616	AGTCCTTGTGCTCTGTCTGC	59.965	55.000	0.00	0.00	0.00	4.26
525	545	1.005748	CCTTGTGCTCTGTCTGCGA	60.006	57.895	0.00	0.00	0.00	5.10
526	546	0.601046	CCTTGTGCTCTGTCTGCGAA	60.601	55.000	0.00	0.00	0.00	4.70
534	554	1.005748	CTGTCTGCGAAGGTGCTCA	60.006	57.895	0.00	0.00	35.36	4.26
535	555	1.287730	CTGTCTGCGAAGGTGCTCAC	61.288	60.000	0.00	0.00	35.36	3.51
536	556	1.005630	GTCTGCGAAGGTGCTCACT	60.006	57.895	0.00	0.00	35.36	3.41
537	557	1.011451	GTCTGCGAAGGTGCTCACTC	61.011	60.000	0.00	0.00	35.36	3.51
538	558	1.181741	TCTGCGAAGGTGCTCACTCT	61.182	55.000	0.00	0.00	35.36	3.24
540	560	0.319900	TGCGAAGGTGCTCACTCTTC	60.320	55.000	15.21	15.21	36.33	2.87
543	563	0.390472	GAAGGTGCTCACTCTTCCCG	60.390	60.000	14.69	0.00	34.98	5.14
544	564	1.831652	AAGGTGCTCACTCTTCCCGG	61.832	60.000	0.00	0.00	0.00	5.73
545	565	2.584391	GGTGCTCACTCTTCCCGGT	61.584	63.158	0.00	0.00	0.00	5.28
563	592	1.544724	GTTACCTTCAGCCATGGCAA	58.455	50.000	37.18	22.80	44.88	4.52
605	634	8.732854	TGGAATCCATTTAATATACCAAGGAGT	58.267	33.333	0.00	0.00	0.00	3.85
618	647	0.178929	AAGGAGTGGAGGAAGGTCGT	60.179	55.000	0.00	0.00	0.00	4.34
622	651	0.969894	AGTGGAGGAAGGTCGTTGAG	59.030	55.000	0.00	0.00	0.00	3.02
624	653	1.118965	TGGAGGAAGGTCGTTGAGCA	61.119	55.000	0.00	0.00	31.89	4.26
626	655	0.318762	GAGGAAGGTCGTTGAGCACT	59.681	55.000	0.00	0.00	31.89	4.40
627	656	0.318762	AGGAAGGTCGTTGAGCACTC	59.681	55.000	0.00	0.00	31.89	3.51
628	657	1.009389	GGAAGGTCGTTGAGCACTCG	61.009	60.000	0.00	0.00	31.89	4.18
629	658	0.318784	GAAGGTCGTTGAGCACTCGT	60.319	55.000	0.00	0.00	31.89	4.18
630	659	0.104304	AAGGTCGTTGAGCACTCGTT	59.896	50.000	0.00	0.00	31.89	3.85
631	660	0.318784	AGGTCGTTGAGCACTCGTTC	60.319	55.000	0.00	0.00	31.89	3.95
632	661	1.282930	GGTCGTTGAGCACTCGTTCC	61.283	60.000	0.00	0.00	0.00	3.62
634	663	2.372690	CGTTGAGCACTCGTTCCGG	61.373	63.158	0.00	0.00	0.00	5.14
636	665	4.717629	TGAGCACTCGTTCCGGCG	62.718	66.667	0.00	0.00	0.00	6.46
637	666	4.719369	GAGCACTCGTTCCGGCGT	62.719	66.667	6.01	0.00	0.00	5.68
638	667	4.719369	AGCACTCGTTCCGGCGTC	62.719	66.667	6.01	0.00	0.00	5.19
640	669	2.504244	CACTCGTTCCGGCGTCTC	60.504	66.667	6.01	0.00	0.00	3.36
642	671	2.100603	CTCGTTCCGGCGTCTCTC	59.899	66.667	6.01	0.00	0.00	3.20
644	673	2.100603	CGTTCCGGCGTCTCTCTC	59.899	66.667	6.01	0.00	0.00	3.20
647	676	1.027792	GTTCCGGCGTCTCTCTCTCT	61.028	60.000	6.01	0.00	0.00	3.10
648	677	0.745128	TTCCGGCGTCTCTCTCTCTC	60.745	60.000	6.01	0.00	0.00	3.20
650	679	1.157870	CCGGCGTCTCTCTCTCTCTC	61.158	65.000	6.01	0.00	0.00	3.20
652	681	1.583054	GGCGTCTCTCTCTCTCTCTC	58.417	60.000	0.00	0.00	0.00	3.20
654	683	2.474816	GCGTCTCTCTCTCTCTCTCTC	58.525	57.143	0.00	0.00	0.00	3.20
655	684	2.803492	GCGTCTCTCTCTCTCTCTCTCC	60.803	59.091	0.00	0.00	0.00	3.71
656	685	2.695666	CGTCTCTCTCTCTCTCTCTCCT	59.304	54.545	0.00	0.00	0.00	3.69
657	686	3.243569	CGTCTCTCTCTCTCTCTCTCCTC	60.244	56.522	0.00	0.00	0.00	3.71
658	687	3.964031	GTCTCTCTCTCTCTCTCTCCTCT	59.036	52.174	0.00	0.00	0.00	3.69
659	688	5.141182	GTCTCTCTCTCTCTCTCTCCTCTA	58.859	50.000	0.00	0.00	0.00	2.43
660	689	5.598830	GTCTCTCTCTCTCTCTCTCCTCTAA	59.401	48.000	0.00	0.00	0.00	2.10
661	690	5.598830	TCTCTCTCTCTCTCTCTCCTCTAAC	59.401	48.000	0.00	0.00	0.00	2.34
662	691	5.277250	TCTCTCTCTCTCTCTCCTCTAACA	58.723	45.833	0.00	0.00	0.00	2.41
664	693	4.408921	TCTCTCTCTCTCTCCTCTAACAGG	59.591	50.000	0.00	0.00	45.15	4.00
665	694	3.118038	TCTCTCTCTCTCCTCTAACAGGC	60.118	52.174	0.00	0.00	43.08	4.85
666	695	2.092103	TCTCTCTCTCCTCTAACAGGCC	60.092	54.545	0.00	0.00	43.08	5.19
667	696	1.063567	TCTCTCTCCTCTAACAGGCCC	60.064	57.143	0.00	0.00	43.08	5.80
669	698	1.381327	TCTCCTCTAACAGGCCCGG	60.381	63.158	0.00	0.00	43.08	5.73
670	699	3.081409	TCCTCTAACAGGCCCGGC	61.081	66.667	0.00	0.00	43.08	6.13
672	701	2.187946	CTCTAACAGGCCCGGCAG	59.812	66.667	12.58	5.60	0.00	4.85
673	702	4.096003	TCTAACAGGCCCGGCAGC	62.096	66.667	12.58	0.00	0.00	5.25
681	710	3.211963	GCCCGGCAGCGAATCAAT	61.212	61.111	3.91	0.00	0.00	2.57
683	712	2.717485	CCGGCAGCGAATCAATGG	59.283	61.111	0.00	0.00	0.00	3.16
687	716	1.065273	GCAGCGAATCAATGGCCTG	59.935	57.895	3.32	0.00	0.00	4.85
689	718	2.123428	AGCGAATCAATGGCCTGCC	61.123	57.895	3.32	0.00	0.00	4.85
698	727	4.040645	TGGCCTGCCACAAAACAA	57.959	50.000	6.80	0.00	41.89	2.83
700	729	0.835941	TGGCCTGCCACAAAACAATT	59.164	45.000	6.80	0.00	41.89	2.32
701	730	1.211457	TGGCCTGCCACAAAACAATTT	59.789	42.857	6.80	0.00	41.89	1.82
719	1043	8.574196	AACAATTTGTTTAGTTTCCTTCGATG	57.426	30.769	8.97	0.00	37.26	3.84
721	1045	5.699097	TTTGTTTAGTTTCCTTCGATGGG	57.301	39.130	16.68	7.95	0.00	4.00
722	1046	4.360951	TGTTTAGTTTCCTTCGATGGGT	57.639	40.909	16.68	3.22	0.00	4.51
726	1050	1.697432	AGTTTCCTTCGATGGGTGACA	59.303	47.619	16.68	0.00	0.00	3.58
731	1055	1.673033	CCTTCGATGGGTGACACTGAC	60.673	57.143	9.48	0.00	0.00	3.51
732	1056	1.000843	CTTCGATGGGTGACACTGACA	59.999	52.381	5.39	3.27	0.00	3.58
734	1058	0.390340	CGATGGGTGACACTGACAGG	60.390	60.000	7.51	0.00	0.00	4.00
735	1059	0.976641	GATGGGTGACACTGACAGGA	59.023	55.000	7.51	0.00	0.00	3.86
736	1060	0.979665	ATGGGTGACACTGACAGGAG	59.020	55.000	7.51	1.42	0.00	3.69
737	1061	1.004440	GGGTGACACTGACAGGAGC	60.004	63.158	7.51	0.00	0.00	4.70
738	1062	1.748403	GGTGACACTGACAGGAGCA	59.252	57.895	7.51	0.00	0.00	4.26
740	1064	1.436600	GTGACACTGACAGGAGCATG	58.563	55.000	7.51	0.00	0.00	4.06
741	1065	0.322648	TGACACTGACAGGAGCATGG	59.677	55.000	7.51	0.00	0.00	3.66
742	1066	0.322975	GACACTGACAGGAGCATGGT	59.677	55.000	7.51	0.00	0.00	3.55
743	1067	0.035881	ACACTGACAGGAGCATGGTG	59.964	55.000	0.00	0.00	0.00	4.17
746	1070	1.065636	ACTGACAGGAGCATGGTGATG	60.066	52.381	0.00	3.04	0.00	3.07
747	1071	0.253894	TGACAGGAGCATGGTGATGG	59.746	55.000	0.00	0.00	0.00	3.51
748	1072	0.465097	GACAGGAGCATGGTGATGGG	60.465	60.000	0.00	0.00	0.00	4.00
749	1073	1.152819	CAGGAGCATGGTGATGGGG	60.153	63.158	0.00	0.00	0.00	4.96
750	1074	2.520260	GGAGCATGGTGATGGGGC	60.520	66.667	0.00	0.00	0.00	5.80
751	1075	2.903855	GAGCATGGTGATGGGGCG	60.904	66.667	0.00	0.00	0.00	6.13
753	1077	2.440065	GCATGGTGATGGGGCGAA	60.440	61.111	0.00	0.00	0.00	4.70
754	1078	2.051518	GCATGGTGATGGGGCGAAA	61.052	57.895	0.00	0.00	0.00	3.46
756	1080	0.670162	CATGGTGATGGGGCGAAATC	59.330	55.000	0.00	0.00	0.00	2.17
757	1081	0.258484	ATGGTGATGGGGCGAAATCA	59.742	50.000	0.00	0.00	0.00	2.57
759	1083	2.106844	GTGATGGGGCGAAATCACC	58.893	57.895	12.30	0.00	44.51	4.02
760	1084	0.679640	GTGATGGGGCGAAATCACCA	60.680	55.000	12.30	0.00	44.51	4.17
761	1085	0.258484	TGATGGGGCGAAATCACCAT	59.742	50.000	0.00	0.00	45.87	3.55
763	1087	2.092158	TGATGGGGCGAAATCACCATTA	60.092	45.455	0.00	0.00	43.40	1.90
765	1089	1.283613	TGGGGCGAAATCACCATTACT	59.716	47.619	0.00	0.00	0.00	2.24
766	1090	2.291282	TGGGGCGAAATCACCATTACTT	60.291	45.455	0.00	0.00	0.00	2.24
767	1091	2.357952	GGGGCGAAATCACCATTACTTC	59.642	50.000	0.00	0.00	0.00	3.01
768	1092	2.357952	GGGCGAAATCACCATTACTTCC	59.642	50.000	0.00	0.00	0.00	3.46
769	1093	2.357952	GGCGAAATCACCATTACTTCCC	59.642	50.000	0.00	0.00	0.00	3.97
770	1094	2.357952	GCGAAATCACCATTACTTCCCC	59.642	50.000	0.00	0.00	0.00	4.81
771	1095	3.616219	CGAAATCACCATTACTTCCCCA	58.384	45.455	0.00	0.00	0.00	4.96
772	1096	4.207165	CGAAATCACCATTACTTCCCCAT	58.793	43.478	0.00	0.00	0.00	4.00
773	1097	4.275936	CGAAATCACCATTACTTCCCCATC	59.724	45.833	0.00	0.00	0.00	3.51
774	1098	4.879295	AATCACCATTACTTCCCCATCA	57.121	40.909	0.00	0.00	0.00	3.07
775	1099	5.408079	AATCACCATTACTTCCCCATCAT	57.592	39.130	0.00	0.00	0.00	2.45
776	1100	4.437682	TCACCATTACTTCCCCATCATC	57.562	45.455	0.00	0.00	0.00	2.92
777	1101	3.138283	TCACCATTACTTCCCCATCATCC	59.862	47.826	0.00	0.00	0.00	3.51
781	1105	3.644966	TTACTTCCCCATCATCCACAC	57.355	47.619	0.00	0.00	0.00	3.82
782	1106	0.625849	ACTTCCCCATCATCCACACC	59.374	55.000	0.00	0.00	0.00	4.16
784	1108	0.331278	TTCCCCATCATCCACACCAC	59.669	55.000	0.00	0.00	0.00	4.16
786	1110	0.332632	CCCCATCATCCACACCACTT	59.667	55.000	0.00	0.00	0.00	3.16
787	1111	1.272648	CCCCATCATCCACACCACTTT	60.273	52.381	0.00	0.00	0.00	2.66
789	1113	2.493278	CCCATCATCCACACCACTTTTC	59.507	50.000	0.00	0.00	0.00	2.29
790	1114	3.424703	CCATCATCCACACCACTTTTCT	58.575	45.455	0.00	0.00	0.00	2.52
792	1116	4.281688	CCATCATCCACACCACTTTTCTTT	59.718	41.667	0.00	0.00	0.00	2.52
794	1118	6.153340	CCATCATCCACACCACTTTTCTTTAT	59.847	38.462	0.00	0.00	0.00	1.40
795	1119	7.309990	CCATCATCCACACCACTTTTCTTTATT	60.310	37.037	0.00	0.00	0.00	1.40
796	1120	6.980593	TCATCCACACCACTTTTCTTTATTG	58.019	36.000	0.00	0.00	0.00	1.90
797	1121	5.195001	TCCACACCACTTTTCTTTATTGC	57.805	39.130	0.00	0.00	0.00	3.56
801	1125	5.990996	CACACCACTTTTCTTTATTGCCATT	59.009	36.000	0.00	0.00	0.00	3.16
802	1126	7.151308	CACACCACTTTTCTTTATTGCCATTA	58.849	34.615	0.00	0.00	0.00	1.90
804	1128	8.034804	ACACCACTTTTCTTTATTGCCATTATC	58.965	33.333	0.00	0.00	0.00	1.75
805	1129	8.034215	CACCACTTTTCTTTATTGCCATTATCA	58.966	33.333	0.00	0.00	0.00	2.15
806	1130	8.761689	ACCACTTTTCTTTATTGCCATTATCAT	58.238	29.630	0.00	0.00	0.00	2.45
807	1131	9.037737	CCACTTTTCTTTATTGCCATTATCATG	57.962	33.333	0.00	0.00	0.00	3.07
809	1133	9.807649	ACTTTTCTTTATTGCCATTATCATGTC	57.192	29.630	0.00	0.00	0.00	3.06
843	1368	8.846943	ATATATACGCCATGAATGACAAAAGA	57.153	30.769	0.00	0.00	0.00	2.52
846	1371	4.942852	ACGCCATGAATGACAAAAGAAAA	58.057	34.783	0.00	0.00	0.00	2.29
847	1372	4.744631	ACGCCATGAATGACAAAAGAAAAC	59.255	37.500	0.00	0.00	0.00	2.43
848	1373	4.143556	CGCCATGAATGACAAAAGAAAACG	60.144	41.667	0.00	0.00	0.00	3.60
849	1374	4.981674	GCCATGAATGACAAAAGAAAACGA	59.018	37.500	0.00	0.00	0.00	3.85
850	1375	5.107875	GCCATGAATGACAAAAGAAAACGAC	60.108	40.000	0.00	0.00	0.00	4.34
851	1376	6.208644	CCATGAATGACAAAAGAAAACGACT	58.791	36.000	0.00	0.00	0.00	4.18
852	1377	6.142798	CCATGAATGACAAAAGAAAACGACTG	59.857	38.462	0.00	0.00	0.00	3.51
853	1378	5.577835	TGAATGACAAAAGAAAACGACTGG	58.422	37.500	0.00	0.00	0.00	4.00
854	1379	5.355630	TGAATGACAAAAGAAAACGACTGGA	59.644	36.000	0.00	0.00	0.00	3.86
856	1381	5.630661	TGACAAAAGAAAACGACTGGAAA	57.369	34.783	0.00	0.00	0.00	3.13
858	1383	4.740268	ACAAAAGAAAACGACTGGAAACC	58.260	39.130	0.00	0.00	0.00	3.27
859	1384	3.685836	AAAGAAAACGACTGGAAACCG	57.314	42.857	0.00	0.00	0.00	4.44
860	1385	0.942252	AGAAAACGACTGGAAACCGC	59.058	50.000	0.00	0.00	0.00	5.68
861	1386	0.942252	GAAAACGACTGGAAACCGCT	59.058	50.000	0.00	0.00	0.00	5.52
862	1387	0.661020	AAAACGACTGGAAACCGCTG	59.339	50.000	0.00	0.00	0.00	5.18
863	1388	0.179067	AAACGACTGGAAACCGCTGA	60.179	50.000	0.00	0.00	0.00	4.26
865	1390	0.389948	ACGACTGGAAACCGCTGATC	60.390	55.000	0.00	0.00	0.00	2.92
871	1415	0.931005	GGAAACCGCTGATCGATCAC	59.069	55.000	23.99	18.25	41.67	3.06
874	1418	1.575244	AACCGCTGATCGATCACATG	58.425	50.000	23.99	15.46	41.67	3.21
875	1419	0.877649	ACCGCTGATCGATCACATGC	60.878	55.000	23.99	22.76	41.67	4.06
883	1427	4.201657	TGATCGATCACATGCCAAAAGAT	58.798	39.130	23.99	0.00	0.00	2.40
884	1428	5.367302	TGATCGATCACATGCCAAAAGATA	58.633	37.500	23.99	0.00	0.00	1.98
885	1429	5.237127	TGATCGATCACATGCCAAAAGATAC	59.763	40.000	23.99	0.00	0.00	2.24
886	1430	3.555547	TCGATCACATGCCAAAAGATACG	59.444	43.478	0.00	0.00	0.00	3.06
887	1431	3.621794	GATCACATGCCAAAAGATACGC	58.378	45.455	0.00	0.00	0.00	4.42
888	1432	2.710377	TCACATGCCAAAAGATACGCT	58.290	42.857	0.00	0.00	0.00	5.07
889	1433	3.081061	TCACATGCCAAAAGATACGCTT	58.919	40.909	0.00	0.00	38.88	4.68
890	1434	4.257731	TCACATGCCAAAAGATACGCTTA	58.742	39.130	0.00	0.00	35.24	3.09
891	1435	4.094294	TCACATGCCAAAAGATACGCTTAC	59.906	41.667	0.00	0.00	35.24	2.34
892	1436	3.377172	ACATGCCAAAAGATACGCTTACC	59.623	43.478	0.00	0.00	35.24	2.85
893	1437	3.060736	TGCCAAAAGATACGCTTACCA	57.939	42.857	0.00	0.00	35.24	3.25
897	1441	4.857037	GCCAAAAGATACGCTTACCAAAAG	59.143	41.667	0.00	0.00	35.24	2.27
898	1442	4.857037	CCAAAAGATACGCTTACCAAAAGC	59.143	41.667	0.00	0.00	35.24	3.51
899	1443	5.335661	CCAAAAGATACGCTTACCAAAAGCT	60.336	40.000	8.00	0.00	40.94	3.74
900	1444	6.128117	CCAAAAGATACGCTTACCAAAAGCTA	60.128	38.462	8.00	1.12	40.94	3.32
902	1446	6.846325	AAGATACGCTTACCAAAAGCTATC	57.154	37.500	8.00	12.06	40.94	2.08
905	1449	3.532542	ACGCTTACCAAAAGCTATCCTC	58.467	45.455	8.00	0.00	40.94	3.71
906	1450	3.197983	ACGCTTACCAAAAGCTATCCTCT	59.802	43.478	8.00	0.00	40.94	3.69
907	1451	3.804873	CGCTTACCAAAAGCTATCCTCTC	59.195	47.826	8.00	0.00	40.94	3.20
910	1454	5.395768	GCTTACCAAAAGCTATCCTCTCTGA	60.396	44.000	2.55	0.00	40.01	3.27
911	1455	6.620877	TTACCAAAAGCTATCCTCTCTGAA	57.379	37.500	0.00	0.00	0.00	3.02
912	1456	5.505181	ACCAAAAGCTATCCTCTCTGAAA	57.495	39.130	0.00	0.00	0.00	2.69
913	1457	6.072199	ACCAAAAGCTATCCTCTCTGAAAT	57.928	37.500	0.00	0.00	0.00	2.17
914	1458	5.884792	ACCAAAAGCTATCCTCTCTGAAATG	59.115	40.000	0.00	0.00	0.00	2.32
915	1459	5.298777	CCAAAAGCTATCCTCTCTGAAATGG	59.701	44.000	0.00	0.00	0.00	3.16
918	1462	2.371510	GCTATCCTCTCTGAAATGGGCT	59.628	50.000	0.00	0.00	0.00	5.19
919	1463	3.806507	GCTATCCTCTCTGAAATGGGCTG	60.807	52.174	0.00	0.00	0.00	4.85
920	1464	0.254178	TCCTCTCTGAAATGGGCTGC	59.746	55.000	0.00	0.00	0.00	5.25
921	1465	0.255318	CCTCTCTGAAATGGGCTGCT	59.745	55.000	0.00	0.00	0.00	4.24
922	1466	1.487976	CCTCTCTGAAATGGGCTGCTA	59.512	52.381	0.00	0.00	0.00	3.49
923	1467	2.092753	CCTCTCTGAAATGGGCTGCTAA	60.093	50.000	0.00	0.00	0.00	3.09
924	1468	2.941720	CTCTCTGAAATGGGCTGCTAAC	59.058	50.000	0.00	0.00	0.00	2.34
925	1469	2.573462	TCTCTGAAATGGGCTGCTAACT	59.427	45.455	0.00	0.00	0.00	2.24
926	1470	2.681848	CTCTGAAATGGGCTGCTAACTG	59.318	50.000	0.00	0.00	0.00	3.16
935	1479	1.467920	GCTGCTAACTGCCCATTTCT	58.532	50.000	0.00	0.00	42.00	2.52
937	1481	3.016736	GCTGCTAACTGCCCATTTCTAA	58.983	45.455	0.00	0.00	42.00	2.10
938	1482	3.065925	GCTGCTAACTGCCCATTTCTAAG	59.934	47.826	0.00	0.00	42.00	2.18
939	1483	3.016736	TGCTAACTGCCCATTTCTAAGC	58.983	45.455	0.00	0.00	42.00	3.09
940	1484	3.282885	GCTAACTGCCCATTTCTAAGCT	58.717	45.455	0.00	0.00	35.15	3.74
941	1485	3.313803	GCTAACTGCCCATTTCTAAGCTC	59.686	47.826	0.00	0.00	35.15	4.09
943	1487	2.996631	ACTGCCCATTTCTAAGCTCAG	58.003	47.619	0.00	0.00	0.00	3.35
944	1488	2.307098	ACTGCCCATTTCTAAGCTCAGT	59.693	45.455	0.00	0.00	0.00	3.41
945	1489	3.519510	ACTGCCCATTTCTAAGCTCAGTA	59.480	43.478	0.00	0.00	32.49	2.74
946	1490	3.873910	TGCCCATTTCTAAGCTCAGTAC	58.126	45.455	0.00	0.00	0.00	2.73
947	1491	3.206964	GCCCATTTCTAAGCTCAGTACC	58.793	50.000	0.00	0.00	0.00	3.34
974	1518	1.955762	GCAGTAGCGCACAAGAAAAG	58.044	50.000	11.47	0.00	0.00	2.27
975	1519	1.531149	GCAGTAGCGCACAAGAAAAGA	59.469	47.619	11.47	0.00	0.00	2.52
976	1520	2.032030	GCAGTAGCGCACAAGAAAAGAA	60.032	45.455	11.47	0.00	0.00	2.52
998	2139	9.886132	AAGAAAGAAACAACAACTACTCTTAGA	57.114	29.630	0.00	0.00	0.00	2.10
1027	2169	4.704103	AGGAGGAGGCGCAGGTGA	62.704	66.667	10.83	0.00	0.00	4.02
1128	2273	0.412244	ACAGAGGCTACACCCCACTA	59.588	55.000	0.00	0.00	40.58	2.74
1233	2378	2.042930	CCCTTCTACCCCCTGGCT	59.957	66.667	0.00	0.00	33.59	4.75
1257	2402	3.694058	CTTGAGGGCTGGCGCTGAT	62.694	63.158	16.50	0.00	39.38	2.90
1326	2471	0.444651	CTCACTCTCGTCTCACCGTC	59.555	60.000	0.00	0.00	0.00	4.79
1390	2535	2.128507	TTTGTTCCCCACGCCAACC	61.129	57.895	0.00	0.00	0.00	3.77
1399	2544	3.542676	ACGCCAACCACTCGGACA	61.543	61.111	0.00	0.00	35.59	4.02
1524	3002	8.361592	ACTATTAGCAATACGTACCACAAATC	57.638	34.615	0.00	0.00	0.00	2.17
1534	3016	6.618287	ACGTACCACAAATCAATCCATATG	57.382	37.500	0.00	0.00	0.00	1.78
1699	3276	4.415150	CCCTGCCATGACCGCACT	62.415	66.667	0.00	0.00	31.61	4.40
1740	3317	2.098233	CCGTTGTTCATCCCGACGG	61.098	63.158	6.99	6.99	45.86	4.79
1759	3336	0.955905	GACTTGCCGTTTTTAGCCCA	59.044	50.000	0.00	0.00	0.00	5.36
1809	3398	1.068417	TCGTCAACGAGGTTGTGGG	59.932	57.895	0.22	0.60	44.22	4.61
1927	3516	0.170339	GCATGTGTTTAGCCCGGAAC	59.830	55.000	0.73	0.00	0.00	3.62
2173	3771	1.410882	GAGCTAGCAAAGAGGGACGAT	59.589	52.381	18.83	0.00	0.00	3.73
2349	3948	1.676635	CACAGGGTGATGGCAGTGG	60.677	63.158	0.00	0.00	35.23	4.00
2353	3952	4.408821	GGTGATGGCAGTGGGCGA	62.409	66.667	0.00	0.00	46.16	5.54
2455	4192	4.980573	AGTTTTAACCTGCATGTACCAGA	58.019	39.130	0.00	0.00	32.03	3.86
2504	4241	4.730949	TTGTATCTTGTTACTCCCTCCG	57.269	45.455	0.00	0.00	0.00	4.63
2522	4259	3.091545	TCCGTCCGGACTTACTTGTTAT	58.908	45.455	30.92	0.00	39.76	1.89
2524	4261	4.336433	TCCGTCCGGACTTACTTGTTATAG	59.664	45.833	30.92	11.25	39.76	1.31
2528	4265	6.976925	CGTCCGGACTTACTTGTTATAGAAAT	59.023	38.462	30.92	0.00	0.00	2.17
2529	4266	7.043590	CGTCCGGACTTACTTGTTATAGAAATG	60.044	40.741	30.92	5.73	0.00	2.32
2600	4337	7.662604	ATTTATACGACAATTATTCCCGGAC	57.337	36.000	0.73	0.00	0.00	4.79
2720	4457	2.283298	AGTAGTTGCTCATGGAATGCG	58.717	47.619	0.00	0.00	46.21	4.73
2754	4497	4.601019	AGTGCGATAATTACTGCAAATGC	58.399	39.130	13.36	0.00	39.34	3.56
2925	4691	1.152383	GCTCGGCGTGGGAGTAATTC	61.152	60.000	6.85	0.00	34.00	2.17
2989	4755	1.279496	CAGGTCCAGATGTTCCCAGA	58.721	55.000	0.00	0.00	0.00	3.86
3164	5000	3.186909	AGAAAGTTTGAAAAAGCGCACC	58.813	40.909	11.47	0.00	0.00	5.01
3211	5047	1.089112	CGCAAGCTCCATGAATGTCA	58.911	50.000	0.00	0.00	0.00	3.58
3217	5053	5.163581	GCAAGCTCCATGAATGTCATTTACT	60.164	40.000	0.00	0.00	34.28	2.24
3278	5114	7.485810	TCTTGCACATAAAATGGAATCAGATG	58.514	34.615	0.00	0.00	33.60	2.90
3358	5194	2.450619	GCTCCGAACAGCTCTGAAC	58.549	57.895	3.60	0.00	36.38	3.18

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
5	6	2.317371	TCTTGCTCTCTCCCTTCAGT	57.683	50.000	0.00	0.00	0.00	3.41
6	7	3.244353	TGTTTCTTGCTCTCTCCCTTCAG	60.244	47.826	0.00	0.00	0.00	3.02
9	10	3.137360	AGTTGTTTCTTGCTCTCTCCCTT	59.863	43.478	0.00	0.00	0.00	3.95
12	13	2.734079	CGAGTTGTTTCTTGCTCTCTCC	59.266	50.000	0.00	0.00	0.00	3.71
19	20	2.319472	GCCATTCGAGTTGTTTCTTGC	58.681	47.619	0.00	0.00	0.00	4.01
20	21	2.665519	CGGCCATTCGAGTTGTTTCTTG	60.666	50.000	2.24	0.00	0.00	3.02
21	22	1.535462	CGGCCATTCGAGTTGTTTCTT	59.465	47.619	2.24	0.00	0.00	2.52
25	26	1.072505	ACCGGCCATTCGAGTTGTT	59.927	52.632	0.00	0.00	0.00	2.83
26	27	1.671054	CACCGGCCATTCGAGTTGT	60.671	57.895	0.00	0.00	0.00	3.32
28	29	1.079127	CTCACCGGCCATTCGAGTT	60.079	57.895	0.00	0.00	0.00	3.01
29	30	2.579201	CTCACCGGCCATTCGAGT	59.421	61.111	0.00	0.00	0.00	4.18
30	31	2.202932	CCTCACCGGCCATTCGAG	60.203	66.667	0.00	2.26	0.00	4.04
31	32	2.238847	CTTCCTCACCGGCCATTCGA	62.239	60.000	0.00	0.00	0.00	3.71
35	36	2.370445	CCTCTTCCTCACCGGCCAT	61.370	63.158	0.00	0.00	0.00	4.40
37	38	3.003763	ACCTCTTCCTCACCGGCC	61.004	66.667	0.00	0.00	0.00	6.13
38	39	2.266055	CACCTCTTCCTCACCGGC	59.734	66.667	0.00	0.00	0.00	6.13
39	40	2.266055	GCACCTCTTCCTCACCGG	59.734	66.667	0.00	0.00	0.00	5.28
40	41	1.079543	CTGCACCTCTTCCTCACCG	60.080	63.158	0.00	0.00	0.00	4.94
42	43	0.321122	CACCTGCACCTCTTCCTCAC	60.321	60.000	0.00	0.00	0.00	3.51
43	44	1.483595	CCACCTGCACCTCTTCCTCA	61.484	60.000	0.00	0.00	0.00	3.86
44	45	1.298014	CCACCTGCACCTCTTCCTC	59.702	63.158	0.00	0.00	0.00	3.71
45	46	0.178903	TACCACCTGCACCTCTTCCT	60.179	55.000	0.00	0.00	0.00	3.36
46	47	0.250513	CTACCACCTGCACCTCTTCC	59.749	60.000	0.00	0.00	0.00	3.46
48	49	1.270907	CTCTACCACCTGCACCTCTT	58.729	55.000	0.00	0.00	0.00	2.85
49	50	0.115349	ACTCTACCACCTGCACCTCT	59.885	55.000	0.00	0.00	0.00	3.69
51	52	0.905337	GGACTCTACCACCTGCACCT	60.905	60.000	0.00	0.00	0.00	4.00
52	53	1.192146	TGGACTCTACCACCTGCACC	61.192	60.000	0.00	0.00	34.77	5.01
53	54	0.247736	CTGGACTCTACCACCTGCAC	59.752	60.000	0.00	0.00	35.91	4.57
54	55	1.544825	GCTGGACTCTACCACCTGCA	61.545	60.000	0.00	0.00	44.21	4.41
55	56	1.219393	GCTGGACTCTACCACCTGC	59.781	63.158	0.00	0.00	40.25	4.85
58	59	0.173708	CGAAGCTGGACTCTACCACC	59.826	60.000	0.00	0.00	35.91	4.61
59	60	0.889306	ACGAAGCTGGACTCTACCAC	59.111	55.000	0.00	0.00	35.91	4.16
61	62	2.477525	CGTTACGAAGCTGGACTCTACC	60.478	54.545	0.00	0.00	0.00	3.18
62	63	2.783333	CGTTACGAAGCTGGACTCTAC	58.217	52.381	0.00	0.00	0.00	2.59
63	64	1.131883	GCGTTACGAAGCTGGACTCTA	59.868	52.381	9.62	0.00	0.00	2.43
65	66	1.077089	GGCGTTACGAAGCTGGACTC	61.077	60.000	9.62	0.00	0.00	3.36
67	68	2.442188	CGGCGTTACGAAGCTGGAC	61.442	63.158	9.62	0.00	36.18	4.02
68	69	2.126228	CGGCGTTACGAAGCTGGA	60.126	61.111	9.62	0.00	36.18	3.86
70	71	3.849953	GCCGGCGTTACGAAGCTG	61.850	66.667	12.58	0.00	39.33	4.24
91	92	3.119096	GCTTTCCTCGGCGTGTCC	61.119	66.667	6.85	0.00	0.00	4.02
92	93	3.479269	CGCTTTCCTCGGCGTGTC	61.479	66.667	6.85	0.00	45.34	3.67
97	98	2.247437	CCATAGCGCTTTCCTCGGC	61.247	63.158	18.68	0.00	0.00	5.54
98	99	2.247437	GCCATAGCGCTTTCCTCGG	61.247	63.158	18.68	6.39	0.00	4.63
99	100	1.218230	GAGCCATAGCGCTTTCCTCG	61.218	60.000	18.68	0.00	46.67	4.63
100	101	2.611012	GAGCCATAGCGCTTTCCTC	58.389	57.895	18.68	12.99	46.67	3.71
101	102	4.865865	GAGCCATAGCGCTTTCCT	57.134	55.556	18.68	7.30	46.67	3.36
107	108	4.592192	TGCCGAGAGCCATAGCGC	62.592	66.667	0.00	0.00	46.67	5.92
108	109	2.659897	GTGCCGAGAGCCATAGCG	60.660	66.667	0.00	0.00	46.67	4.26
109	110	1.300542	GAGTGCCGAGAGCCATAGC	60.301	63.158	0.00	0.00	42.71	2.97
110	111	1.007964	CGAGTGCCGAGAGCCATAG	60.008	63.158	0.00	0.00	42.71	2.23
111	112	1.453197	TCGAGTGCCGAGAGCCATA	60.453	57.895	0.00	0.00	43.23	2.74
112	113	2.755876	TCGAGTGCCGAGAGCCAT	60.756	61.111	0.00	0.00	43.23	4.40
119	120	2.885113	CATGAGGTCGAGTGCCGA	59.115	61.111	0.00	0.00	46.35	5.54
120	121	2.004808	TAGCATGAGGTCGAGTGCCG	62.005	60.000	0.00	0.00	38.31	5.69
121	122	0.249238	CTAGCATGAGGTCGAGTGCC	60.249	60.000	0.00	0.00	38.31	5.01
122	123	0.873743	GCTAGCATGAGGTCGAGTGC	60.874	60.000	10.63	0.00	37.84	4.40
123	124	0.249238	GGCTAGCATGAGGTCGAGTG	60.249	60.000	18.24	0.00	0.00	3.51
124	125	0.684479	TGGCTAGCATGAGGTCGAGT	60.684	55.000	18.24	0.00	0.00	4.18
125	126	0.461548	TTGGCTAGCATGAGGTCGAG	59.538	55.000	18.24	0.00	0.00	4.04
126	127	0.175760	GTTGGCTAGCATGAGGTCGA	59.824	55.000	18.24	0.00	0.00	4.20
127	128	0.108186	TGTTGGCTAGCATGAGGTCG	60.108	55.000	18.24	0.00	0.00	4.79
128	129	1.208052	TCTGTTGGCTAGCATGAGGTC	59.792	52.381	18.24	0.00	0.00	3.85
129	130	1.209019	CTCTGTTGGCTAGCATGAGGT	59.791	52.381	18.24	0.00	0.00	3.85
130	131	1.474677	CCTCTGTTGGCTAGCATGAGG	60.475	57.143	18.24	18.69	31.59	3.86
131	132	1.950828	CCTCTGTTGGCTAGCATGAG	58.049	55.000	18.24	14.24	0.00	2.90
141	142	1.299976	GGGGTGTAGCCTCTGTTGG	59.700	63.158	0.00	0.00	33.93	3.77
142	143	1.079127	CGGGGTGTAGCCTCTGTTG	60.079	63.158	0.00	0.00	34.84	3.33
143	144	2.955881	GCGGGGTGTAGCCTCTGTT	61.956	63.158	0.00	0.00	34.84	3.16
144	145	3.391382	GCGGGGTGTAGCCTCTGT	61.391	66.667	0.00	0.00	34.84	3.41
145	146	3.077556	AGCGGGGTGTAGCCTCTG	61.078	66.667	0.00	0.00	34.84	3.35
146	147	2.760385	GAGCGGGGTGTAGCCTCT	60.760	66.667	0.00	0.00	34.84	3.69
147	148	4.208686	CGAGCGGGGTGTAGCCTC	62.209	72.222	0.00	0.00	37.43	4.70
149	150	4.078516	AACGAGCGGGGTGTAGCC	62.079	66.667	0.00	0.00	0.00	3.93
150	151	2.508663	GAACGAGCGGGGTGTAGC	60.509	66.667	0.00	0.00	0.00	3.58
151	152	0.108329	AATGAACGAGCGGGGTGTAG	60.108	55.000	0.00	0.00	0.00	2.74
152	153	0.322322	AAATGAACGAGCGGGGTGTA	59.678	50.000	0.00	0.00	0.00	2.90
153	154	0.953960	GAAATGAACGAGCGGGGTGT	60.954	55.000	0.00	0.00	0.00	4.16
154	155	0.673644	AGAAATGAACGAGCGGGGTG	60.674	55.000	0.00	0.00	0.00	4.61
155	156	0.899720	TAGAAATGAACGAGCGGGGT	59.100	50.000	0.00	0.00	0.00	4.95
156	157	1.287425	GTAGAAATGAACGAGCGGGG	58.713	55.000	0.00	0.00	0.00	5.73
157	158	1.287425	GGTAGAAATGAACGAGCGGG	58.713	55.000	0.00	0.00	0.00	6.13
158	159	0.921347	CGGTAGAAATGAACGAGCGG	59.079	55.000	0.00	0.00	32.36	5.52
159	160	1.582502	GACGGTAGAAATGAACGAGCG	59.417	52.381	0.00	0.00	39.06	5.03
160	161	1.582502	CGACGGTAGAAATGAACGAGC	59.417	52.381	0.00	0.00	0.00	5.03
161	162	3.127081	TCGACGGTAGAAATGAACGAG	57.873	47.619	0.00	0.00	0.00	4.18
162	163	3.119743	ACATCGACGGTAGAAATGAACGA	60.120	43.478	0.00	0.00	0.00	3.85
163	164	3.176708	ACATCGACGGTAGAAATGAACG	58.823	45.455	0.00	0.00	0.00	3.95
164	165	3.550678	GGACATCGACGGTAGAAATGAAC	59.449	47.826	0.00	0.00	0.00	3.18
165	166	3.429822	GGGACATCGACGGTAGAAATGAA	60.430	47.826	0.00	0.00	0.00	2.57
166	167	2.100252	GGGACATCGACGGTAGAAATGA	59.900	50.000	0.00	0.00	0.00	2.57
167	168	2.470821	GGGACATCGACGGTAGAAATG	58.529	52.381	0.00	0.00	0.00	2.32
168	169	1.066605	CGGGACATCGACGGTAGAAAT	59.933	52.381	0.00	0.00	0.00	2.17
169	170	0.452987	CGGGACATCGACGGTAGAAA	59.547	55.000	0.00	0.00	0.00	2.52
170	171	1.378882	CCGGGACATCGACGGTAGAA	61.379	60.000	3.40	0.00	42.53	2.10
171	172	1.820906	CCGGGACATCGACGGTAGA	60.821	63.158	3.40	0.00	42.53	2.59
172	173	2.719979	CCGGGACATCGACGGTAG	59.280	66.667	3.40	0.00	42.53	3.18
179	180	3.943479	TTTCGGTGCCGGGACATCG	62.943	63.158	28.30	21.94	45.52	3.84
180	181	2.046700	TTTCGGTGCCGGGACATC	60.047	61.111	28.30	10.42	40.25	3.06
181	182	2.359478	GTTTCGGTGCCGGGACAT	60.359	61.111	28.30	0.00	40.25	3.06
182	183	4.629523	GGTTTCGGTGCCGGGACA	62.630	66.667	28.30	5.04	40.25	4.02
183	184	4.629523	TGGTTTCGGTGCCGGGAC	62.630	66.667	19.24	19.24	40.25	4.46
184	185	4.629523	GTGGTTTCGGTGCCGGGA	62.630	66.667	10.94	0.00	40.25	5.14
190	191	4.973055	TCCGCGGTGGTTTCGGTG	62.973	66.667	27.15	0.00	43.35	4.94
191	192	4.974989	GTCCGCGGTGGTTTCGGT	62.975	66.667	27.15	0.00	43.35	4.69
192	193	2.567564	ATAGTCCGCGGTGGTTTCGG	62.568	60.000	27.15	0.00	44.16	4.30
193	194	0.738412	AATAGTCCGCGGTGGTTTCG	60.738	55.000	27.15	0.00	39.52	3.46
194	195	2.298411	TAATAGTCCGCGGTGGTTTC	57.702	50.000	27.15	9.74	39.52	2.78
195	196	2.994186	ATAATAGTCCGCGGTGGTTT	57.006	45.000	27.15	16.84	39.52	3.27
196	197	2.994186	AATAATAGTCCGCGGTGGTT	57.006	45.000	27.15	17.45	39.52	3.67
197	198	2.940410	CAAAATAATAGTCCGCGGTGGT	59.060	45.455	27.15	13.39	39.52	4.16
198	199	3.199677	TCAAAATAATAGTCCGCGGTGG	58.800	45.455	27.15	0.00	40.09	4.61
199	200	4.319477	CCATCAAAATAATAGTCCGCGGTG	60.319	45.833	27.15	12.03	0.00	4.94
200	201	3.813166	CCATCAAAATAATAGTCCGCGGT	59.187	43.478	27.15	9.68	0.00	5.68
201	202	3.813166	ACCATCAAAATAATAGTCCGCGG	59.187	43.478	22.12	22.12	0.00	6.46
202	203	4.750098	AGACCATCAAAATAATAGTCCGCG	59.250	41.667	0.00	0.00	0.00	6.46
203	204	5.992217	AGAGACCATCAAAATAATAGTCCGC	59.008	40.000	0.00	0.00	0.00	5.54
204	205	9.360093	GATAGAGACCATCAAAATAATAGTCCG	57.640	37.037	0.00	0.00	0.00	4.79
205	206	9.360093	CGATAGAGACCATCAAAATAATAGTCC	57.640	37.037	0.00	0.00	39.76	3.85
235	236	9.503399	GGCTAAGTGGCTAACTGTAATTATATT	57.497	33.333	0.00	0.00	39.81	1.28
251	252	7.751768	AATTATTTGATCTAGGCTAAGTGGC	57.248	36.000	0.00	0.00	42.15	5.01
258	259	8.854117	GGACATGAAAATTATTTGATCTAGGCT	58.146	33.333	0.00	0.00	0.00	4.58
259	260	8.084684	GGGACATGAAAATTATTTGATCTAGGC	58.915	37.037	0.00	0.00	0.00	3.93
260	261	8.292448	CGGGACATGAAAATTATTTGATCTAGG	58.708	37.037	0.00	0.00	0.00	3.02
261	262	8.292448	CCGGGACATGAAAATTATTTGATCTAG	58.708	37.037	0.00	0.00	0.00	2.43
262	263	7.996066	TCCGGGACATGAAAATTATTTGATCTA	59.004	33.333	0.00	0.00	0.00	1.98
263	264	6.833416	TCCGGGACATGAAAATTATTTGATCT	59.167	34.615	0.00	0.00	0.00	2.75
264	265	7.038154	TCCGGGACATGAAAATTATTTGATC	57.962	36.000	0.00	0.00	0.00	2.92
265	266	6.607198	ACTCCGGGACATGAAAATTATTTGAT	59.393	34.615	0.00	0.00	0.00	2.57
266	267	5.949354	ACTCCGGGACATGAAAATTATTTGA	59.051	36.000	0.00	0.00	0.00	2.69
267	268	6.035843	CACTCCGGGACATGAAAATTATTTG	58.964	40.000	0.00	0.00	0.00	2.32
268	269	5.714806	ACACTCCGGGACATGAAAATTATTT	59.285	36.000	0.00	0.00	0.00	1.40
269	270	5.125417	CACACTCCGGGACATGAAAATTATT	59.875	40.000	0.00	0.00	0.00	1.40
270	271	4.640201	CACACTCCGGGACATGAAAATTAT	59.360	41.667	0.00	0.00	0.00	1.28
271	272	4.006989	CACACTCCGGGACATGAAAATTA	58.993	43.478	0.00	0.00	0.00	1.40
272	273	2.819608	CACACTCCGGGACATGAAAATT	59.180	45.455	0.00	0.00	0.00	1.82
273	274	2.224769	ACACACTCCGGGACATGAAAAT	60.225	45.455	0.00	0.00	0.00	1.82
274	275	1.142060	ACACACTCCGGGACATGAAAA	59.858	47.619	0.00	0.00	0.00	2.29
275	276	0.762418	ACACACTCCGGGACATGAAA	59.238	50.000	0.00	0.00	0.00	2.69
276	277	0.762418	AACACACTCCGGGACATGAA	59.238	50.000	0.00	0.00	0.00	2.57
277	278	1.548719	CTAACACACTCCGGGACATGA	59.451	52.381	0.00	0.00	0.00	3.07
278	279	1.275291	ACTAACACACTCCGGGACATG	59.725	52.381	0.00	0.00	0.00	3.21
279	280	1.275291	CACTAACACACTCCGGGACAT	59.725	52.381	0.00	0.00	0.00	3.06
280	281	0.677288	CACTAACACACTCCGGGACA	59.323	55.000	0.00	0.00	0.00	4.02
281	282	0.963962	TCACTAACACACTCCGGGAC	59.036	55.000	0.00	0.00	0.00	4.46
282	283	0.963962	GTCACTAACACACTCCGGGA	59.036	55.000	0.00	0.00	0.00	5.14
283	284	0.677288	TGTCACTAACACACTCCGGG	59.323	55.000	0.00	0.00	31.20	5.73
296	297	3.126001	ACATCAAACATCCGTGTCACT	57.874	42.857	0.65	0.00	37.67	3.41
298	299	3.629855	ACAAACATCAAACATCCGTGTCA	59.370	39.130	0.00	0.00	37.67	3.58
303	304	3.756434	AGGGTACAAACATCAAACATCCG	59.244	43.478	0.00	0.00	0.00	4.18
344	363	6.064060	TCAATTGCATAAGCCTAGCATAAGT	58.936	36.000	0.00	0.00	41.13	2.24
349	368	5.857471	AATTCAATTGCATAAGCCTAGCA	57.143	34.783	0.00	0.00	41.13	3.49
354	373	6.809869	AGGAGTAAATTCAATTGCATAAGCC	58.190	36.000	0.00	0.00	41.13	4.35
361	380	6.151817	AGACCAGAAGGAGTAAATTCAATTGC	59.848	38.462	0.00	0.00	38.69	3.56
370	389	3.858135	ACCTCAGACCAGAAGGAGTAAA	58.142	45.455	0.00	0.00	38.69	2.01
372	391	3.332783	TGTACCTCAGACCAGAAGGAGTA	59.667	47.826	0.00	0.00	38.69	2.59
374	393	2.757868	CTGTACCTCAGACCAGAAGGAG	59.242	54.545	0.00	0.00	46.27	3.69
385	404	5.065474	GCAACTACTCTACTCTGTACCTCAG	59.935	48.000	0.00	0.00	44.85	3.35
386	405	4.942483	GCAACTACTCTACTCTGTACCTCA	59.058	45.833	0.00	0.00	0.00	3.86
387	406	5.187687	AGCAACTACTCTACTCTGTACCTC	58.812	45.833	0.00	0.00	0.00	3.85
390	409	4.630940	ACGAGCAACTACTCTACTCTGTAC	59.369	45.833	0.00	0.00	34.35	2.90
392	411	3.437395	CACGAGCAACTACTCTACTCTGT	59.563	47.826	0.00	0.00	34.35	3.41
421	440	8.445275	TCTCTTTACTGCACTAAACAAATTGA	57.555	30.769	0.00	0.00	0.00	2.57
422	441	9.515020	TTTCTCTTTACTGCACTAAACAAATTG	57.485	29.630	0.00	0.00	0.00	2.32
453	473	5.355910	GCCCGTAAAAGTCCATTTCATTAGA	59.644	40.000	0.00	0.00	0.00	2.10
455	475	5.258051	AGCCCGTAAAAGTCCATTTCATTA	58.742	37.500	0.00	0.00	0.00	1.90
460	480	4.082408	GCTTTAGCCCGTAAAAGTCCATTT	60.082	41.667	0.00	0.00	35.56	2.32
466	486	5.462530	AAAATGCTTTAGCCCGTAAAAGT	57.537	34.783	0.00	0.00	41.18	2.66
467	487	5.120053	CCAAAAATGCTTTAGCCCGTAAAAG	59.880	40.000	0.00	0.00	41.18	2.27
469	489	4.039366	ACCAAAAATGCTTTAGCCCGTAAA	59.961	37.500	0.00	0.00	41.18	2.01
470	490	3.574826	ACCAAAAATGCTTTAGCCCGTAA	59.425	39.130	0.00	0.00	41.18	3.18
471	491	3.158676	ACCAAAAATGCTTTAGCCCGTA	58.841	40.909	0.00	0.00	41.18	4.02
472	492	1.967779	ACCAAAAATGCTTTAGCCCGT	59.032	42.857	0.00	0.00	41.18	5.28
473	493	2.741759	ACCAAAAATGCTTTAGCCCG	57.258	45.000	0.00	0.00	41.18	6.13
474	494	4.001618	TGAACCAAAAATGCTTTAGCCC	57.998	40.909	0.00	0.00	41.18	5.19
475	495	6.558771	AAATGAACCAAAAATGCTTTAGCC	57.441	33.333	0.00	0.00	41.18	3.93
487	507	9.757227	CACAAGGACTAAATAAAATGAACCAAA	57.243	29.630	0.00	0.00	0.00	3.28
495	515	7.885399	AGACAGAGCACAAGGACTAAATAAAAT	59.115	33.333	0.00	0.00	0.00	1.82
500	520	4.573900	CAGACAGAGCACAAGGACTAAAT	58.426	43.478	0.00	0.00	0.00	1.40
509	529	0.601046	CCTTCGCAGACAGAGCACAA	60.601	55.000	0.00	0.00	34.32	3.33
516	536	1.005748	TGAGCACCTTCGCAGACAG	60.006	57.895	0.00	0.00	34.32	3.51
523	543	0.390472	GGGAAGAGTGAGCACCTTCG	60.390	60.000	17.54	0.00	38.42	3.79
525	545	1.674057	CGGGAAGAGTGAGCACCTT	59.326	57.895	0.00	1.07	0.00	3.50
526	546	2.286523	CCGGGAAGAGTGAGCACCT	61.287	63.158	0.00	0.00	0.00	4.00
534	554	1.900486	CTGAAGGTAACCGGGAAGAGT	59.100	52.381	6.32	0.00	37.17	3.24
535	555	1.405661	GCTGAAGGTAACCGGGAAGAG	60.406	57.143	6.32	0.00	37.17	2.85
536	556	0.611714	GCTGAAGGTAACCGGGAAGA	59.388	55.000	6.32	0.00	37.17	2.87
537	557	0.392595	GGCTGAAGGTAACCGGGAAG	60.393	60.000	6.32	0.00	37.17	3.46
538	558	1.128809	TGGCTGAAGGTAACCGGGAA	61.129	55.000	6.32	0.00	37.17	3.97
540	560	0.748005	CATGGCTGAAGGTAACCGGG	60.748	60.000	6.32	0.00	37.17	5.73
543	563	0.323360	TGCCATGGCTGAAGGTAACC	60.323	55.000	35.53	4.44	42.51	2.85
544	564	1.202348	GTTGCCATGGCTGAAGGTAAC	59.798	52.381	35.53	24.71	40.01	2.50
545	565	1.202989	TGTTGCCATGGCTGAAGGTAA	60.203	47.619	35.53	18.05	42.51	2.85
580	609	9.014297	CACTCCTTGGTATATTAAATGGATTCC	57.986	37.037	0.00	0.00	0.00	3.01
589	618	6.329197	CCTTCCTCCACTCCTTGGTATATTAA	59.671	42.308	0.00	0.00	46.97	1.40
592	621	4.235372	CCTTCCTCCACTCCTTGGTATAT	58.765	47.826	0.00	0.00	46.97	0.86
593	622	3.013648	ACCTTCCTCCACTCCTTGGTATA	59.986	47.826	0.00	0.00	46.97	1.47
594	623	2.225908	ACCTTCCTCCACTCCTTGGTAT	60.226	50.000	0.00	0.00	46.97	2.73
595	624	1.151413	ACCTTCCTCCACTCCTTGGTA	59.849	52.381	0.00	0.00	46.97	3.25
596	625	0.104409	ACCTTCCTCCACTCCTTGGT	60.104	55.000	0.00	0.00	46.97	3.67
598	627	0.247736	CGACCTTCCTCCACTCCTTG	59.752	60.000	0.00	0.00	0.00	3.61
600	629	0.178929	AACGACCTTCCTCCACTCCT	60.179	55.000	0.00	0.00	0.00	3.69
602	631	0.966920	TCAACGACCTTCCTCCACTC	59.033	55.000	0.00	0.00	0.00	3.51
603	632	0.969894	CTCAACGACCTTCCTCCACT	59.030	55.000	0.00	0.00	0.00	4.00
605	634	1.118965	TGCTCAACGACCTTCCTCCA	61.119	55.000	0.00	0.00	0.00	3.86
612	641	0.318784	GAACGAGTGCTCAACGACCT	60.319	55.000	11.09	0.00	0.00	3.85
628	657	1.027792	AGAGAGAGAGACGCCGGAAC	61.028	60.000	5.05	0.00	0.00	3.62
629	658	0.745128	GAGAGAGAGAGACGCCGGAA	60.745	60.000	5.05	0.00	0.00	4.30
630	659	1.153329	GAGAGAGAGAGACGCCGGA	60.153	63.158	5.05	0.00	0.00	5.14
631	660	1.153249	AGAGAGAGAGAGACGCCGG	60.153	63.158	0.00	0.00	0.00	6.13
632	661	0.179084	AGAGAGAGAGAGAGACGCCG	60.179	60.000	0.00	0.00	0.00	6.46
634	663	2.474816	GAGAGAGAGAGAGAGAGACGC	58.525	57.143	0.00	0.00	0.00	5.19
636	665	3.964031	AGAGGAGAGAGAGAGAGAGAGAC	59.036	52.174	0.00	0.00	0.00	3.36
637	666	4.271807	AGAGGAGAGAGAGAGAGAGAGA	57.728	50.000	0.00	0.00	0.00	3.10
638	667	5.363868	TGTTAGAGGAGAGAGAGAGAGAGAG	59.636	48.000	0.00	0.00	0.00	3.20
640	669	5.453903	CCTGTTAGAGGAGAGAGAGAGAGAG	60.454	52.000	0.00	0.00	46.33	3.20
642	671	4.708177	CCTGTTAGAGGAGAGAGAGAGAG	58.292	52.174	0.00	0.00	46.33	3.20
644	673	3.214328	GCCTGTTAGAGGAGAGAGAGAG	58.786	54.545	0.00	0.00	46.33	3.20
647	676	1.063567	GGGCCTGTTAGAGGAGAGAGA	60.064	57.143	0.84	0.00	46.33	3.10
648	677	1.408969	GGGCCTGTTAGAGGAGAGAG	58.591	60.000	0.84	0.00	46.33	3.20
650	679	1.395826	CCGGGCCTGTTAGAGGAGAG	61.396	65.000	11.58	0.00	46.33	3.20
652	681	3.095347	GCCGGGCCTGTTAGAGGAG	62.095	68.421	11.58	0.00	46.33	3.69
654	683	3.391665	CTGCCGGGCCTGTTAGAGG	62.392	68.421	17.97	0.00	46.13	3.69
655	684	2.187946	CTGCCGGGCCTGTTAGAG	59.812	66.667	17.97	0.63	0.00	2.43
656	685	4.096003	GCTGCCGGGCCTGTTAGA	62.096	66.667	17.97	0.00	0.00	2.10
664	693	3.211963	ATTGATTCGCTGCCGGGC	61.212	61.111	13.32	13.32	34.56	6.13
665	694	2.717485	CATTGATTCGCTGCCGGG	59.283	61.111	2.18	0.00	34.56	5.73
666	695	2.717485	CCATTGATTCGCTGCCGG	59.283	61.111	0.00	0.00	34.56	6.13
667	696	2.025156	GCCATTGATTCGCTGCCG	59.975	61.111	0.00	0.00	0.00	5.69
669	698	1.065273	CAGGCCATTGATTCGCTGC	59.935	57.895	5.01	0.00	0.00	5.25
670	699	1.065273	GCAGGCCATTGATTCGCTG	59.935	57.895	5.01	0.00	0.00	5.18
672	701	2.414594	GGCAGGCCATTGATTCGC	59.585	61.111	5.01	0.00	35.81	4.70
673	702	3.923013	TGGCAGGCCATTGATTCG	58.077	55.556	9.35	0.00	41.89	3.34
681	710	0.835941	AATTGTTTTGTGGCAGGCCA	59.164	45.000	9.35	9.35	45.02	5.36
695	724	7.145323	CCATCGAAGGAAACTAAACAAATTGT	58.855	34.615	0.00	0.00	42.68	2.71
697	726	6.266786	ACCCATCGAAGGAAACTAAACAAATT	59.733	34.615	8.60	0.00	42.68	1.82
698	727	5.773176	ACCCATCGAAGGAAACTAAACAAAT	59.227	36.000	8.60	0.00	42.68	2.32
700	729	4.517453	CACCCATCGAAGGAAACTAAACAA	59.483	41.667	8.60	0.00	42.68	2.83
701	730	4.069304	CACCCATCGAAGGAAACTAAACA	58.931	43.478	8.60	0.00	42.68	2.83
702	731	4.153655	GTCACCCATCGAAGGAAACTAAAC	59.846	45.833	8.60	0.00	42.68	2.01
708	1032	1.697432	AGTGTCACCCATCGAAGGAAA	59.303	47.619	8.60	0.00	0.00	3.13
709	1033	1.001974	CAGTGTCACCCATCGAAGGAA	59.998	52.381	8.60	0.00	0.00	3.36
715	1039	0.390340	CCTGTCAGTGTCACCCATCG	60.390	60.000	0.00	0.00	0.00	3.84
717	1041	0.979665	CTCCTGTCAGTGTCACCCAT	59.020	55.000	0.00	0.00	0.00	4.00
718	1042	1.758440	GCTCCTGTCAGTGTCACCCA	61.758	60.000	0.00	0.00	0.00	4.51
719	1043	1.004440	GCTCCTGTCAGTGTCACCC	60.004	63.158	0.00	0.00	0.00	4.61
721	1045	1.436600	CATGCTCCTGTCAGTGTCAC	58.563	55.000	0.00	0.00	0.00	3.67
722	1046	0.322648	CCATGCTCCTGTCAGTGTCA	59.677	55.000	0.00	0.00	0.00	3.58
726	1050	1.065636	CATCACCATGCTCCTGTCAGT	60.066	52.381	0.00	0.00	0.00	3.41
731	1055	1.152819	CCCCATCACCATGCTCCTG	60.153	63.158	0.00	0.00	0.00	3.86
732	1056	3.065787	GCCCCATCACCATGCTCCT	62.066	63.158	0.00	0.00	0.00	3.69
734	1058	2.891941	TTCGCCCCATCACCATGCTC	62.892	60.000	0.00	0.00	0.00	4.26
735	1059	2.497792	TTTCGCCCCATCACCATGCT	62.498	55.000	0.00	0.00	0.00	3.79
736	1060	1.394266	ATTTCGCCCCATCACCATGC	61.394	55.000	0.00	0.00	0.00	4.06
737	1061	0.670162	GATTTCGCCCCATCACCATG	59.330	55.000	0.00	0.00	0.00	3.66
738	1062	0.258484	TGATTTCGCCCCATCACCAT	59.742	50.000	0.00	0.00	0.00	3.55
740	1064	2.106844	GTGATTTCGCCCCATCACC	58.893	57.895	5.77	0.00	42.39	4.02
741	1065	0.679640	TGGTGATTTCGCCCCATCAC	60.680	55.000	7.66	7.85	45.90	3.06
742	1066	0.258484	ATGGTGATTTCGCCCCATCA	59.742	50.000	7.66	0.00	45.66	3.07
743	1067	1.402787	AATGGTGATTTCGCCCCATC	58.597	50.000	7.66	0.00	45.66	3.51
746	1070	2.052782	AGTAATGGTGATTTCGCCCC	57.947	50.000	7.66	0.00	45.66	5.80
747	1071	2.357952	GGAAGTAATGGTGATTTCGCCC	59.642	50.000	7.66	0.00	45.66	6.13
748	1072	2.357952	GGGAAGTAATGGTGATTTCGCC	59.642	50.000	3.13	3.13	46.40	5.54
749	1073	2.357952	GGGGAAGTAATGGTGATTTCGC	59.642	50.000	0.00	0.00	0.00	4.70
750	1074	3.616219	TGGGGAAGTAATGGTGATTTCG	58.384	45.455	0.00	0.00	0.00	3.46
751	1075	5.200483	TGATGGGGAAGTAATGGTGATTTC	58.800	41.667	0.00	0.00	0.00	2.17
753	1077	4.879295	TGATGGGGAAGTAATGGTGATT	57.121	40.909	0.00	0.00	0.00	2.57
754	1078	4.202609	GGATGATGGGGAAGTAATGGTGAT	60.203	45.833	0.00	0.00	0.00	3.06
756	1080	3.117550	TGGATGATGGGGAAGTAATGGTG	60.118	47.826	0.00	0.00	0.00	4.17
757	1081	3.117512	GTGGATGATGGGGAAGTAATGGT	60.118	47.826	0.00	0.00	0.00	3.55
758	1082	3.117550	TGTGGATGATGGGGAAGTAATGG	60.118	47.826	0.00	0.00	0.00	3.16
759	1083	3.885297	GTGTGGATGATGGGGAAGTAATG	59.115	47.826	0.00	0.00	0.00	1.90
760	1084	3.117512	GGTGTGGATGATGGGGAAGTAAT	60.118	47.826	0.00	0.00	0.00	1.89
761	1085	2.241176	GGTGTGGATGATGGGGAAGTAA	59.759	50.000	0.00	0.00	0.00	2.24
763	1087	0.625849	GGTGTGGATGATGGGGAAGT	59.374	55.000	0.00	0.00	0.00	3.01
765	1089	0.331278	GTGGTGTGGATGATGGGGAA	59.669	55.000	0.00	0.00	0.00	3.97
766	1090	0.549902	AGTGGTGTGGATGATGGGGA	60.550	55.000	0.00	0.00	0.00	4.81
767	1091	0.332632	AAGTGGTGTGGATGATGGGG	59.667	55.000	0.00	0.00	0.00	4.96
768	1092	2.220653	AAAGTGGTGTGGATGATGGG	57.779	50.000	0.00	0.00	0.00	4.00
769	1093	3.424703	AGAAAAGTGGTGTGGATGATGG	58.575	45.455	0.00	0.00	0.00	3.51
770	1094	5.458041	AAAGAAAAGTGGTGTGGATGATG	57.542	39.130	0.00	0.00	0.00	3.07
771	1095	7.605449	CAATAAAGAAAAGTGGTGTGGATGAT	58.395	34.615	0.00	0.00	0.00	2.45
772	1096	6.516527	GCAATAAAGAAAAGTGGTGTGGATGA	60.517	38.462	0.00	0.00	0.00	2.92
773	1097	5.634859	GCAATAAAGAAAAGTGGTGTGGATG	59.365	40.000	0.00	0.00	0.00	3.51
774	1098	5.279456	GGCAATAAAGAAAAGTGGTGTGGAT	60.279	40.000	0.00	0.00	0.00	3.41
775	1099	4.038642	GGCAATAAAGAAAAGTGGTGTGGA	59.961	41.667	0.00	0.00	0.00	4.02
776	1100	4.202202	TGGCAATAAAGAAAAGTGGTGTGG	60.202	41.667	0.00	0.00	0.00	4.17
777	1101	4.942852	TGGCAATAAAGAAAAGTGGTGTG	58.057	39.130	0.00	0.00	0.00	3.82
781	1105	9.037737	CATGATAATGGCAATAAAGAAAAGTGG	57.962	33.333	0.00	0.00	0.00	4.00
782	1106	9.590451	ACATGATAATGGCAATAAAGAAAAGTG	57.410	29.630	0.00	0.00	0.00	3.16
817	1141	9.936759	TCTTTTGTCATTCATGGCGTATATATA	57.063	29.630	0.00	0.00	34.48	0.86
819	1143	8.669946	TTCTTTTGTCATTCATGGCGTATATA	57.330	30.769	0.00	0.00	34.48	0.86
821	1145	6.993786	TTCTTTTGTCATTCATGGCGTATA	57.006	33.333	0.00	0.00	34.48	1.47
822	1146	5.895636	TTCTTTTGTCATTCATGGCGTAT	57.104	34.783	0.00	0.00	34.48	3.06
823	1147	5.697473	TTTCTTTTGTCATTCATGGCGTA	57.303	34.783	0.00	0.00	34.48	4.42
836	1361	4.673320	CGGTTTCCAGTCGTTTTCTTTTGT	60.673	41.667	0.00	0.00	0.00	2.83
838	1363	3.732774	GCGGTTTCCAGTCGTTTTCTTTT	60.733	43.478	0.00	0.00	0.00	2.27
839	1364	2.223409	GCGGTTTCCAGTCGTTTTCTTT	60.223	45.455	0.00	0.00	0.00	2.52
840	1365	1.332686	GCGGTTTCCAGTCGTTTTCTT	59.667	47.619	0.00	0.00	0.00	2.52
842	1367	0.942252	AGCGGTTTCCAGTCGTTTTC	59.058	50.000	0.00	0.00	0.00	2.29
843	1368	0.661020	CAGCGGTTTCCAGTCGTTTT	59.339	50.000	0.00	0.00	0.00	2.43
846	1371	0.389948	GATCAGCGGTTTCCAGTCGT	60.390	55.000	0.00	0.00	0.00	4.34
847	1372	1.413767	CGATCAGCGGTTTCCAGTCG	61.414	60.000	0.00	0.00	36.03	4.18
848	1373	0.108804	TCGATCAGCGGTTTCCAGTC	60.109	55.000	0.00	0.00	41.33	3.51
849	1374	0.537188	ATCGATCAGCGGTTTCCAGT	59.463	50.000	0.00	0.00	41.33	4.00
850	1375	1.212616	GATCGATCAGCGGTTTCCAG	58.787	55.000	20.52	0.00	41.33	3.86
851	1376	0.534873	TGATCGATCAGCGGTTTCCA	59.465	50.000	23.99	0.00	41.33	3.53
852	1377	0.931005	GTGATCGATCAGCGGTTTCC	59.069	55.000	27.95	10.25	41.33	3.13
853	1378	1.640428	TGTGATCGATCAGCGGTTTC	58.360	50.000	27.95	14.68	41.33	2.78
854	1379	1.935873	CATGTGATCGATCAGCGGTTT	59.064	47.619	27.95	7.04	41.33	3.27
856	1381	0.877649	GCATGTGATCGATCAGCGGT	60.878	55.000	27.95	11.51	41.33	5.68
858	1383	0.877213	TGGCATGTGATCGATCAGCG	60.877	55.000	27.95	18.93	37.51	5.18
859	1384	1.302366	TTGGCATGTGATCGATCAGC	58.698	50.000	27.95	25.12	37.51	4.26
860	1385	3.624410	TCTTTTGGCATGTGATCGATCAG	59.376	43.478	27.95	17.33	37.51	2.90
861	1386	3.608796	TCTTTTGGCATGTGATCGATCA	58.391	40.909	23.99	23.99	0.00	2.92
862	1387	4.825546	ATCTTTTGGCATGTGATCGATC	57.174	40.909	18.72	18.72	0.00	3.69
863	1388	4.212004	CGTATCTTTTGGCATGTGATCGAT	59.788	41.667	0.00	0.00	0.00	3.59
865	1390	3.846023	GCGTATCTTTTGGCATGTGATCG	60.846	47.826	0.00	0.88	0.00	3.69
871	1415	3.376859	TGGTAAGCGTATCTTTTGGCATG	59.623	43.478	0.00	0.00	36.25	4.06
874	1418	4.428615	TTTGGTAAGCGTATCTTTTGGC	57.571	40.909	0.00	0.00	36.25	4.52
875	1419	4.857037	GCTTTTGGTAAGCGTATCTTTTGG	59.143	41.667	0.00	0.00	36.25	3.28
886	1430	4.813697	CAGAGAGGATAGCTTTTGGTAAGC	59.186	45.833	0.00	1.38	43.31	3.09
887	1431	6.227298	TCAGAGAGGATAGCTTTTGGTAAG	57.773	41.667	0.00	0.00	35.90	2.34
888	1432	6.620877	TTCAGAGAGGATAGCTTTTGGTAA	57.379	37.500	0.00	0.00	35.90	2.85
889	1433	6.620877	TTTCAGAGAGGATAGCTTTTGGTA	57.379	37.500	0.00	0.00	36.78	3.25
890	1434	5.505181	TTTCAGAGAGGATAGCTTTTGGT	57.495	39.130	0.00	0.00	0.00	3.67
891	1435	5.298777	CCATTTCAGAGAGGATAGCTTTTGG	59.701	44.000	0.00	0.00	0.00	3.28
892	1436	5.298777	CCCATTTCAGAGAGGATAGCTTTTG	59.701	44.000	0.00	0.00	0.00	2.44
893	1437	5.444176	CCCATTTCAGAGAGGATAGCTTTT	58.556	41.667	0.00	0.00	0.00	2.27
897	1441	2.371510	AGCCCATTTCAGAGAGGATAGC	59.628	50.000	0.00	0.00	0.00	2.97
898	1442	3.806507	GCAGCCCATTTCAGAGAGGATAG	60.807	52.174	0.00	0.00	0.00	2.08
899	1443	2.105477	GCAGCCCATTTCAGAGAGGATA	59.895	50.000	0.00	0.00	0.00	2.59
900	1444	1.133853	GCAGCCCATTTCAGAGAGGAT	60.134	52.381	0.00	0.00	0.00	3.24
902	1446	0.255318	AGCAGCCCATTTCAGAGAGG	59.745	55.000	0.00	0.00	0.00	3.69
905	1449	2.681848	CAGTTAGCAGCCCATTTCAGAG	59.318	50.000	0.00	0.00	0.00	3.35
906	1450	2.715046	CAGTTAGCAGCCCATTTCAGA	58.285	47.619	0.00	0.00	0.00	3.27
907	1451	1.133790	GCAGTTAGCAGCCCATTTCAG	59.866	52.381	0.00	0.00	44.79	3.02
919	1463	3.282885	AGCTTAGAAATGGGCAGTTAGC	58.717	45.455	0.00	0.00	44.65	3.09
920	1464	4.517285	TGAGCTTAGAAATGGGCAGTTAG	58.483	43.478	0.00	0.00	0.00	2.34
921	1465	4.019321	ACTGAGCTTAGAAATGGGCAGTTA	60.019	41.667	13.21	0.00	31.94	2.24
922	1466	3.245052	ACTGAGCTTAGAAATGGGCAGTT	60.245	43.478	13.21	0.00	31.94	3.16
923	1467	2.307098	ACTGAGCTTAGAAATGGGCAGT	59.693	45.455	13.21	1.90	0.00	4.40
924	1468	2.996631	ACTGAGCTTAGAAATGGGCAG	58.003	47.619	13.21	1.22	0.00	4.85
925	1469	3.370527	GGTACTGAGCTTAGAAATGGGCA	60.371	47.826	13.21	0.00	0.00	5.36
926	1470	3.206964	GGTACTGAGCTTAGAAATGGGC	58.793	50.000	13.21	0.00	0.00	5.36
929	1473	5.163540	ACCTACGGTACTGAGCTTAGAAATG	60.164	44.000	13.21	2.12	32.11	2.32
930	1474	4.954826	ACCTACGGTACTGAGCTTAGAAAT	59.045	41.667	13.21	0.00	32.11	2.17
931	1475	4.338879	ACCTACGGTACTGAGCTTAGAAA	58.661	43.478	13.21	0.00	32.11	2.52
932	1476	3.960571	ACCTACGGTACTGAGCTTAGAA	58.039	45.455	13.21	0.00	32.11	2.10
933	1477	3.641434	ACCTACGGTACTGAGCTTAGA	57.359	47.619	13.21	0.00	32.11	2.10
934	1478	3.250521	GCTACCTACGGTACTGAGCTTAG	59.749	52.174	9.17	3.53	37.09	2.18
935	1479	3.209410	GCTACCTACGGTACTGAGCTTA	58.791	50.000	9.17	0.00	37.09	3.09
937	1481	1.064906	TGCTACCTACGGTACTGAGCT	60.065	52.381	9.17	0.00	35.36	4.09
938	1482	1.334243	CTGCTACCTACGGTACTGAGC	59.666	57.143	9.17	7.04	37.09	4.26
939	1483	2.641305	ACTGCTACCTACGGTACTGAG	58.359	52.381	9.17	1.56	37.09	3.35
940	1484	2.795231	ACTGCTACCTACGGTACTGA	57.205	50.000	9.17	0.00	37.09	3.41
941	1485	2.290093	GCTACTGCTACCTACGGTACTG	59.710	54.545	0.00	0.00	37.09	2.74
943	1487	1.262683	CGCTACTGCTACCTACGGTAC	59.737	57.143	0.00	0.00	37.09	3.34
944	1488	1.586422	CGCTACTGCTACCTACGGTA	58.414	55.000	0.00	0.00	37.09	4.02
945	1489	1.722636	GCGCTACTGCTACCTACGGT	61.723	60.000	0.00	0.00	40.16	4.83
946	1490	1.008767	GCGCTACTGCTACCTACGG	60.009	63.158	0.00	0.00	36.97	4.02
947	1491	0.591741	GTGCGCTACTGCTACCTACG	60.592	60.000	9.73	0.00	36.97	3.51
952	1496	1.710013	TTCTTGTGCGCTACTGCTAC	58.290	50.000	9.73	0.00	36.97	3.58
962	1506	5.344665	TGTTGTTTCTTTCTTTTCTTGTGCG	59.655	36.000	0.00	0.00	0.00	5.34
963	1507	6.704512	TGTTGTTTCTTTCTTTTCTTGTGC	57.295	33.333	0.00	0.00	0.00	4.57
964	1508	8.298030	AGTTGTTGTTTCTTTCTTTTCTTGTG	57.702	30.769	0.00	0.00	0.00	3.33
965	1509	9.406828	GTAGTTGTTGTTTCTTTCTTTTCTTGT	57.593	29.630	0.00	0.00	0.00	3.16
966	1510	9.626045	AGTAGTTGTTGTTTCTTTCTTTTCTTG	57.374	29.630	0.00	0.00	0.00	3.02
969	1513	9.841880	AAGAGTAGTTGTTGTTTCTTTCTTTTC	57.158	29.630	0.00	0.00	0.00	2.29
998	2139	4.489771	CCTCCTCGCCGGCCATTT	62.490	66.667	23.46	0.00	0.00	2.32
1019	2161	1.153489	CAGGACTCCATCACCTGCG	60.153	63.158	0.00	0.00	43.32	5.18
1027	2169	0.247736	GTCACGAAGCAGGACTCCAT	59.752	55.000	0.00	0.00	0.00	3.41
1128	2273	1.303888	TCGGCGGTAGAAGTGGACT	60.304	57.895	7.21	0.00	0.00	3.85
1254	2399	0.178767	CGATCTCCAACCTGCCATCA	59.821	55.000	0.00	0.00	0.00	3.07
1257	2402	0.904865	AGTCGATCTCCAACCTGCCA	60.905	55.000	0.00	0.00	0.00	4.92
1326	2471	3.241804	GCTTGAAGTCGCTAAAGTCATCG	60.242	47.826	0.00	0.00	0.00	3.84
1390	2535	0.668706	CACAAGAGGCTGTCCGAGTG	60.669	60.000	0.00	0.00	37.47	3.51
1395	2540	1.066787	GTAGTCCACAAGAGGCTGTCC	60.067	57.143	0.00	0.00	0.00	4.02
1399	2544	0.178903	TGGGTAGTCCACAAGAGGCT	60.179	55.000	0.00	0.00	41.46	4.58
1507	2985	6.429791	TGGATTGATTTGTGGTACGTATTG	57.570	37.500	0.00	0.00	0.00	1.90
1512	2990	6.038161	ACACATATGGATTGATTTGTGGTACG	59.962	38.462	7.80	0.00	38.73	3.67
1524	3002	7.216494	TGTCACCTACATACACATATGGATTG	58.784	38.462	7.80	0.00	42.32	2.67
1740	3317	0.955905	TGGGCTAAAAACGGCAAGTC	59.044	50.000	0.00	0.00	0.00	3.01
1759	3336	1.917568	TGCGGGGGTAGGTTTATCTTT	59.082	47.619	0.00	0.00	0.00	2.52
1786	3372	0.031585	CAACCTCGTTGACGACTGGA	59.968	55.000	15.89	0.00	45.28	3.86
1809	3398	3.369921	CCTTGGCAAGGGTGAAGC	58.630	61.111	34.03	0.00	45.27	3.86
1900	3489	2.419021	GGCTAAACACATGCATTGCCAT	60.419	45.455	6.12	0.00	38.99	4.40
1927	3516	2.571216	CGTAGCATCCGGGGGTAGG	61.571	68.421	0.00	6.59	0.00	3.18
2349	3948	5.347342	CCTCTATAGACATGATGATTCGCC	58.653	45.833	0.00	0.00	0.00	5.54
2353	3952	5.247792	TGCAGCCTCTATAGACATGATGATT	59.752	40.000	0.00	0.00	0.00	2.57
2455	4192	3.616956	ACATCCATGACTCGAACACAT	57.383	42.857	0.00	0.00	0.00	3.21
2504	4241	7.224167	CCATTTCTATAACAAGTAAGTCCGGAC	59.776	40.741	27.67	27.67	0.00	4.79
2594	4331	2.518825	CTACTCCCTCCGTCCGGG	60.519	72.222	0.00	0.00	43.38	5.73
2596	4333	2.119655	CACCTACTCCCTCCGTCCG	61.120	68.421	0.00	0.00	0.00	4.79
2600	4337	0.974383	ACAAACACCTACTCCCTCCG	59.026	55.000	0.00	0.00	0.00	4.63
2720	4457	6.790336	AATTATCGCACTAAACAAAATCGC	57.210	33.333	0.00	0.00	0.00	4.58
3164	5000	3.428870	ACAGACAAAATCAGCTACGAACG	59.571	43.478	0.00	0.00	0.00	3.95
3211	5047	7.171337	GGTGTGTGCAAAAATTCATGAGTAAAT	59.829	33.333	0.00	0.00	0.00	1.40
3217	5053	4.370049	CAGGTGTGTGCAAAAATTCATGA	58.630	39.130	0.00	0.00	0.00	3.07

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.