Multiple sequence alignment - TraesCS6D01G023700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G023700 chr6D 100.000 3161 0 0 1 3161 8986232 8989392 0.000000e+00 5838.0
1 TraesCS6D01G023700 chr6D 87.339 1477 175 9 1103 2577 33895143 33896609 0.000000e+00 1681.0
2 TraesCS6D01G023700 chr6D 82.274 1574 249 23 1022 2585 8552773 8551220 0.000000e+00 1334.0
3 TraesCS6D01G023700 chr6D 84.464 1120 147 23 1570 2674 8915622 8916729 0.000000e+00 1079.0
4 TraesCS6D01G023700 chr6D 78.602 1159 216 27 1022 2167 8659797 8658658 0.000000e+00 737.0
5 TraesCS6D01G023700 chr6B 86.382 1689 196 22 1024 2693 16320598 16322271 0.000000e+00 1814.0
6 TraesCS6D01G023700 chr6B 87.820 1486 167 11 1103 2585 15715116 15713642 0.000000e+00 1729.0
7 TraesCS6D01G023700 chr6B 83.914 1579 229 15 1130 2693 15381413 15379845 0.000000e+00 1485.0
8 TraesCS6D01G023700 chr6B 86.692 1300 161 9 1103 2397 16237403 16238695 0.000000e+00 1432.0
9 TraesCS6D01G023700 chr6B 83.431 1539 233 16 1049 2577 15397904 15396378 0.000000e+00 1410.0
10 TraesCS6D01G023700 chr6B 84.958 1190 165 7 983 2169 670533475 670532297 0.000000e+00 1194.0
11 TraesCS6D01G023700 chr6B 81.731 1467 233 25 1023 2480 15234828 15233388 0.000000e+00 1192.0
12 TraesCS6D01G023700 chr6B 96.746 461 15 0 2701 3161 15379780 15379320 0.000000e+00 769.0
13 TraesCS6D01G023700 chr6B 94.143 461 18 1 2701 3161 16322336 16322787 0.000000e+00 693.0
14 TraesCS6D01G023700 chr6B 86.857 525 38 18 8 503 670587483 670586961 2.750000e-155 558.0
15 TraesCS6D01G023700 chr6B 81.119 143 22 5 202 344 683632069 683631932 3.330000e-20 110.0
16 TraesCS6D01G023700 chr6B 88.158 76 7 2 433 507 52574232 52574158 4.340000e-14 89.8
17 TraesCS6D01G023700 chr6A 85.309 1620 222 12 1078 2693 9461534 9463141 0.000000e+00 1659.0
18 TraesCS6D01G023700 chr6A 85.420 1454 199 11 1130 2577 9355310 9356756 0.000000e+00 1498.0
19 TraesCS6D01G023700 chr6A 90.607 1022 84 9 986 2004 9364590 9365602 0.000000e+00 1345.0
20 TraesCS6D01G023700 chr6A 82.405 1023 163 14 1567 2585 9474641 9475650 0.000000e+00 876.0
21 TraesCS6D01G023700 chr6A 92.903 465 28 3 2701 3161 9463206 9463669 0.000000e+00 671.0
22 TraesCS6D01G023700 chr6A 92.952 227 8 3 507 733 9368925 9369143 1.090000e-84 324.0
23 TraesCS6D01G023700 chr6A 89.610 154 11 5 8 156 8995871 8995718 1.160000e-44 191.0
24 TraesCS6D01G023700 chr6A 90.351 114 3 2 840 953 9369629 9369734 3.290000e-30 143.0
25 TraesCS6D01G023700 chr6A 97.500 40 1 0 948 987 9369746 9369785 5.660000e-08 69.4
26 TraesCS6D01G023700 chr1B 84.068 1519 203 22 1138 2637 662037456 662038954 0.000000e+00 1428.0
27 TraesCS6D01G023700 chr1B 86.935 199 22 3 119 315 67665227 67665423 1.480000e-53 220.0
28 TraesCS6D01G023700 chr1A 82.990 1164 177 17 983 2140 589248512 589247364 0.000000e+00 1033.0
29 TraesCS6D01G023700 chr1D 83.813 1007 136 18 1002 2004 491589755 491588772 0.000000e+00 931.0
30 TraesCS6D01G023700 chr1D 88.333 180 20 1 137 316 66998020 66998198 6.870000e-52 215.0
31 TraesCS6D01G023700 chr2D 84.211 209 27 5 119 325 584240930 584241134 6.920000e-47 198.0
32 TraesCS6D01G023700 chr3B 84.343 198 27 3 119 314 50184889 50185084 1.160000e-44 191.0
33 TraesCS6D01G023700 chr3B 84.492 187 15 6 2 182 418075754 418075932 4.190000e-39 172.0
34 TraesCS6D01G023700 chr3B 85.057 174 18 4 139 312 662030947 662031112 1.510000e-38 171.0
35 TraesCS6D01G023700 chr3B 78.992 119 21 4 198 314 23399929 23400045 9.400000e-11 78.7
36 TraesCS6D01G023700 chr3A 84.530 181 15 7 5 183 431137674 431137843 1.950000e-37 167.0
37 TraesCS6D01G023700 chr7B 84.358 179 15 6 8 181 47791552 47791722 2.520000e-36 163.0
38 TraesCS6D01G023700 chr7B 84.524 168 14 5 5 169 664356097 664356255 4.220000e-34 156.0
39 TraesCS6D01G023700 chrUn 85.000 140 18 2 183 320 77392495 77392357 4.250000e-29 139.0
40 TraesCS6D01G023700 chr2A 82.979 141 21 3 176 314 749285802 749285663 1.190000e-24 124.0
41 TraesCS6D01G023700 chr4A 80.833 120 14 5 62 180 630755503 630755614 5.620000e-13 86.1
42 TraesCS6D01G023700 chr5D 100.000 28 0 0 565 592 571422 571395 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G023700 chr6D 8986232 8989392 3160 False 5838.00 5838 100.0000 1 3161 1 chr6D.!!$F2 3160
1 TraesCS6D01G023700 chr6D 33895143 33896609 1466 False 1681.00 1681 87.3390 1103 2577 1 chr6D.!!$F3 1474
2 TraesCS6D01G023700 chr6D 8551220 8552773 1553 True 1334.00 1334 82.2740 1022 2585 1 chr6D.!!$R1 1563
3 TraesCS6D01G023700 chr6D 8915622 8916729 1107 False 1079.00 1079 84.4640 1570 2674 1 chr6D.!!$F1 1104
4 TraesCS6D01G023700 chr6D 8658658 8659797 1139 True 737.00 737 78.6020 1022 2167 1 chr6D.!!$R2 1145
5 TraesCS6D01G023700 chr6B 15713642 15715116 1474 True 1729.00 1729 87.8200 1103 2585 1 chr6B.!!$R3 1482
6 TraesCS6D01G023700 chr6B 16237403 16238695 1292 False 1432.00 1432 86.6920 1103 2397 1 chr6B.!!$F1 1294
7 TraesCS6D01G023700 chr6B 15396378 15397904 1526 True 1410.00 1410 83.4310 1049 2577 1 chr6B.!!$R2 1528
8 TraesCS6D01G023700 chr6B 16320598 16322787 2189 False 1253.50 1814 90.2625 1024 3161 2 chr6B.!!$F2 2137
9 TraesCS6D01G023700 chr6B 670532297 670533475 1178 True 1194.00 1194 84.9580 983 2169 1 chr6B.!!$R5 1186
10 TraesCS6D01G023700 chr6B 15233388 15234828 1440 True 1192.00 1192 81.7310 1023 2480 1 chr6B.!!$R1 1457
11 TraesCS6D01G023700 chr6B 15379320 15381413 2093 True 1127.00 1485 90.3300 1130 3161 2 chr6B.!!$R8 2031
12 TraesCS6D01G023700 chr6B 670586961 670587483 522 True 558.00 558 86.8570 8 503 1 chr6B.!!$R6 495
13 TraesCS6D01G023700 chr6A 9355310 9356756 1446 False 1498.00 1498 85.4200 1130 2577 1 chr6A.!!$F1 1447
14 TraesCS6D01G023700 chr6A 9461534 9463669 2135 False 1165.00 1659 89.1060 1078 3161 2 chr6A.!!$F4 2083
15 TraesCS6D01G023700 chr6A 9474641 9475650 1009 False 876.00 876 82.4050 1567 2585 1 chr6A.!!$F2 1018
16 TraesCS6D01G023700 chr6A 9364590 9369785 5195 False 470.35 1345 92.8525 507 2004 4 chr6A.!!$F3 1497
17 TraesCS6D01G023700 chr1B 662037456 662038954 1498 False 1428.00 1428 84.0680 1138 2637 1 chr1B.!!$F2 1499
18 TraesCS6D01G023700 chr1A 589247364 589248512 1148 True 1033.00 1033 82.9900 983 2140 1 chr1A.!!$R1 1157
19 TraesCS6D01G023700 chr1D 491588772 491589755 983 True 931.00 931 83.8130 1002 2004 1 chr1D.!!$R1 1002

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
614 644 0.034574 ACTGGCAAGTGACCACAACA 60.035 50.0 0.0 0.00 34.48 3.33 F
898 928 0.039074 GACACTGTCTGACGAGTGGG 60.039 60.0 27.8 14.11 43.33 4.61 F
1057 1090 0.043334 CCCTTCTTCCTCCCTCTCCA 59.957 60.0 0.0 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 1747 0.247460 CTGAACATCCGAGAGCCACA 59.753 55.0 0.00 0.0 0.00 4.17 R
1747 1807 0.535102 AGTTCCACTTTGGCGGTGAG 60.535 55.0 6.63 0.0 37.47 3.51 R
2551 3011 1.292085 TACCTAGTTTGGGAAGGGCC 58.708 55.0 0.00 0.0 34.52 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 7.717568 TCGGATTTCCTTTTTAAACACATGAA 58.282 30.769 0.00 0.00 0.00 2.57
199 202 5.570234 TTTTTACGTGAAAAACAGCTCCT 57.430 34.783 15.03 0.00 41.16 3.69
214 217 4.202567 ACAGCTCCTGGGTTTGATTTAGAA 60.203 41.667 0.00 0.00 35.51 2.10
226 229 6.320418 GGTTTGATTTAGAACGGGGTTGATAT 59.680 38.462 0.00 0.00 0.00 1.63
230 233 6.887545 TGATTTAGAACGGGGTTGATATGTTT 59.112 34.615 0.00 0.00 0.00 2.83
245 248 0.470766 TGTTTAGGGTGCCAACGACT 59.529 50.000 0.00 0.00 0.00 4.18
246 249 1.693062 TGTTTAGGGTGCCAACGACTA 59.307 47.619 0.00 0.00 0.00 2.59
256 259 2.166459 TGCCAACGACTAGGATTCAGAG 59.834 50.000 0.00 0.00 0.00 3.35
290 293 6.973474 TCGATTTAGCTAAGCTCTACAAGTTC 59.027 38.462 6.24 0.00 40.44 3.01
343 346 9.962783 AAAGAAATTGAGACAAAGAAAGAGATG 57.037 29.630 0.00 0.00 0.00 2.90
345 348 7.941238 AGAAATTGAGACAAAGAAAGAGATGGA 59.059 33.333 0.00 0.00 0.00 3.41
346 349 7.446001 AATTGAGACAAAGAAAGAGATGGAC 57.554 36.000 0.00 0.00 0.00 4.02
347 350 4.560128 TGAGACAAAGAAAGAGATGGACG 58.440 43.478 0.00 0.00 0.00 4.79
349 352 4.815269 AGACAAAGAAAGAGATGGACGAG 58.185 43.478 0.00 0.00 0.00 4.18
350 353 4.282195 AGACAAAGAAAGAGATGGACGAGT 59.718 41.667 0.00 0.00 0.00 4.18
351 354 4.962155 ACAAAGAAAGAGATGGACGAGTT 58.038 39.130 0.00 0.00 0.00 3.01
434 459 3.084039 GGTCATTTGGTCAGCATCAAGA 58.916 45.455 0.00 0.00 0.00 3.02
435 460 3.119708 GGTCATTTGGTCAGCATCAAGAC 60.120 47.826 0.00 0.00 0.00 3.01
440 465 1.790387 GTCAGCATCAAGACCACGC 59.210 57.895 0.00 0.00 0.00 5.34
450 480 0.951558 AAGACCACGCAAACCATCAC 59.048 50.000 0.00 0.00 0.00 3.06
456 486 0.108585 ACGCAAACCATCACCACTCT 59.891 50.000 0.00 0.00 0.00 3.24
464 494 2.225242 ACCATCACCACTCTGTCTCTCT 60.225 50.000 0.00 0.00 0.00 3.10
486 516 3.470567 CGCTCGCACCAGTCGTTC 61.471 66.667 0.00 0.00 0.00 3.95
487 517 3.112709 GCTCGCACCAGTCGTTCC 61.113 66.667 0.00 0.00 0.00 3.62
488 518 2.432628 CTCGCACCAGTCGTTCCC 60.433 66.667 0.00 0.00 0.00 3.97
489 519 2.915659 TCGCACCAGTCGTTCCCT 60.916 61.111 0.00 0.00 0.00 4.20
490 520 2.432628 CGCACCAGTCGTTCCCTC 60.433 66.667 0.00 0.00 0.00 4.30
491 521 2.432628 GCACCAGTCGTTCCCTCG 60.433 66.667 0.00 0.00 0.00 4.63
492 522 2.432628 CACCAGTCGTTCCCTCGC 60.433 66.667 0.00 0.00 0.00 5.03
493 523 3.692406 ACCAGTCGTTCCCTCGCC 61.692 66.667 0.00 0.00 0.00 5.54
494 524 4.796231 CCAGTCGTTCCCTCGCCG 62.796 72.222 0.00 0.00 0.00 6.46
514 544 2.665185 GGCGCCACCGGATCATAC 60.665 66.667 24.80 0.00 34.32 2.39
515 545 2.665185 GCGCCACCGGATCATACC 60.665 66.667 9.46 0.00 34.32 2.73
516 546 3.138625 CGCCACCGGATCATACCT 58.861 61.111 9.46 0.00 0.00 3.08
517 547 1.812686 GCGCCACCGGATCATACCTA 61.813 60.000 9.46 0.00 34.32 3.08
518 548 0.243907 CGCCACCGGATCATACCTAG 59.756 60.000 9.46 0.00 0.00 3.02
519 549 1.339097 GCCACCGGATCATACCTAGT 58.661 55.000 9.46 0.00 0.00 2.57
520 550 2.522185 GCCACCGGATCATACCTAGTA 58.478 52.381 9.46 0.00 0.00 1.82
521 551 3.097614 GCCACCGGATCATACCTAGTAT 58.902 50.000 9.46 0.00 0.00 2.12
522 552 3.514309 GCCACCGGATCATACCTAGTATT 59.486 47.826 9.46 0.00 0.00 1.89
523 553 4.020485 GCCACCGGATCATACCTAGTATTT 60.020 45.833 9.46 0.00 0.00 1.40
524 554 5.186409 GCCACCGGATCATACCTAGTATTTA 59.814 44.000 9.46 0.00 0.00 1.40
525 555 6.627508 GCCACCGGATCATACCTAGTATTTAG 60.628 46.154 9.46 0.00 0.00 1.85
526 556 6.662234 CCACCGGATCATACCTAGTATTTAGA 59.338 42.308 9.46 0.00 0.00 2.10
527 557 7.148052 CCACCGGATCATACCTAGTATTTAGAG 60.148 44.444 9.46 0.00 0.00 2.43
528 558 7.393796 CACCGGATCATACCTAGTATTTAGAGT 59.606 40.741 9.46 0.00 0.00 3.24
529 559 7.949006 ACCGGATCATACCTAGTATTTAGAGTT 59.051 37.037 9.46 0.00 0.00 3.01
530 560 8.804204 CCGGATCATACCTAGTATTTAGAGTTT 58.196 37.037 0.00 0.00 0.00 2.66
531 561 9.627395 CGGATCATACCTAGTATTTAGAGTTTG 57.373 37.037 0.00 0.00 0.00 2.93
532 562 9.425577 GGATCATACCTAGTATTTAGAGTTTGC 57.574 37.037 0.00 0.00 0.00 3.68
533 563 9.425577 GATCATACCTAGTATTTAGAGTTTGCC 57.574 37.037 0.00 0.00 0.00 4.52
534 564 8.548880 TCATACCTAGTATTTAGAGTTTGCCT 57.451 34.615 0.00 0.00 0.00 4.75
535 565 8.639761 TCATACCTAGTATTTAGAGTTTGCCTC 58.360 37.037 0.00 0.00 40.80 4.70
536 566 6.869206 ACCTAGTATTTAGAGTTTGCCTCA 57.131 37.500 0.00 0.00 43.12 3.86
537 567 7.253905 ACCTAGTATTTAGAGTTTGCCTCAA 57.746 36.000 0.00 0.00 43.12 3.02
538 568 7.862675 ACCTAGTATTTAGAGTTTGCCTCAAT 58.137 34.615 0.00 0.00 43.12 2.57
539 569 8.329502 ACCTAGTATTTAGAGTTTGCCTCAATT 58.670 33.333 0.00 0.00 43.12 2.32
540 570 9.178758 CCTAGTATTTAGAGTTTGCCTCAATTT 57.821 33.333 0.00 0.00 43.12 1.82
541 571 9.994432 CTAGTATTTAGAGTTTGCCTCAATTTG 57.006 33.333 0.00 0.00 43.12 2.32
542 572 7.830739 AGTATTTAGAGTTTGCCTCAATTTGG 58.169 34.615 0.00 0.00 43.12 3.28
543 573 6.670695 ATTTAGAGTTTGCCTCAATTTGGT 57.329 33.333 0.00 0.00 43.12 3.67
544 574 7.775053 ATTTAGAGTTTGCCTCAATTTGGTA 57.225 32.000 0.00 0.00 43.12 3.25
545 575 6.569179 TTAGAGTTTGCCTCAATTTGGTAC 57.431 37.500 0.00 0.00 43.12 3.34
546 576 3.826729 AGAGTTTGCCTCAATTTGGTACC 59.173 43.478 4.43 4.43 43.12 3.34
547 577 2.556622 AGTTTGCCTCAATTTGGTACCG 59.443 45.455 7.57 0.00 0.00 4.02
548 578 1.540267 TTGCCTCAATTTGGTACCGG 58.460 50.000 7.57 0.00 0.00 5.28
549 579 0.693622 TGCCTCAATTTGGTACCGGA 59.306 50.000 9.46 0.00 0.00 5.14
550 580 1.283613 TGCCTCAATTTGGTACCGGAT 59.716 47.619 9.46 0.29 0.00 4.18
551 581 1.947456 GCCTCAATTTGGTACCGGATC 59.053 52.381 9.46 0.00 0.00 3.36
552 582 2.682563 GCCTCAATTTGGTACCGGATCA 60.683 50.000 9.46 0.00 0.00 2.92
553 583 3.616219 CCTCAATTTGGTACCGGATCAA 58.384 45.455 9.46 6.62 0.00 2.57
554 584 4.207165 CCTCAATTTGGTACCGGATCAAT 58.793 43.478 9.46 0.00 0.00 2.57
555 585 4.036734 CCTCAATTTGGTACCGGATCAATG 59.963 45.833 9.46 6.01 0.00 2.82
556 586 3.380004 TCAATTTGGTACCGGATCAATGC 59.620 43.478 9.46 0.00 0.00 3.56
557 587 2.799126 TTTGGTACCGGATCAATGCT 57.201 45.000 9.46 0.00 0.00 3.79
558 588 2.325583 TTGGTACCGGATCAATGCTC 57.674 50.000 9.46 0.00 0.00 4.26
559 589 1.199615 TGGTACCGGATCAATGCTCA 58.800 50.000 9.46 0.00 0.00 4.26
560 590 1.768275 TGGTACCGGATCAATGCTCAT 59.232 47.619 9.46 0.00 0.00 2.90
561 591 2.172505 TGGTACCGGATCAATGCTCATT 59.827 45.455 9.46 0.00 0.00 2.57
562 592 2.808543 GGTACCGGATCAATGCTCATTC 59.191 50.000 9.46 0.00 0.00 2.67
563 593 3.495100 GGTACCGGATCAATGCTCATTCT 60.495 47.826 9.46 0.00 0.00 2.40
564 594 2.843701 ACCGGATCAATGCTCATTCTC 58.156 47.619 9.46 0.00 0.00 2.87
565 595 2.437281 ACCGGATCAATGCTCATTCTCT 59.563 45.455 9.46 0.00 0.00 3.10
566 596 2.806818 CCGGATCAATGCTCATTCTCTG 59.193 50.000 0.00 0.00 0.00 3.35
567 597 3.464907 CGGATCAATGCTCATTCTCTGT 58.535 45.455 0.00 0.00 0.00 3.41
568 598 4.502087 CCGGATCAATGCTCATTCTCTGTA 60.502 45.833 0.00 0.00 0.00 2.74
569 599 5.052481 CGGATCAATGCTCATTCTCTGTAA 58.948 41.667 0.00 0.00 0.00 2.41
570 600 5.525012 CGGATCAATGCTCATTCTCTGTAAA 59.475 40.000 0.00 0.00 0.00 2.01
571 601 6.510799 CGGATCAATGCTCATTCTCTGTAAAC 60.511 42.308 0.00 0.00 0.00 2.01
572 602 6.317140 GGATCAATGCTCATTCTCTGTAAACA 59.683 38.462 0.00 0.00 0.00 2.83
573 603 7.148188 GGATCAATGCTCATTCTCTGTAAACAA 60.148 37.037 0.00 0.00 0.00 2.83
574 604 7.509141 TCAATGCTCATTCTCTGTAAACAAA 57.491 32.000 0.00 0.00 0.00 2.83
575 605 8.114331 TCAATGCTCATTCTCTGTAAACAAAT 57.886 30.769 0.00 0.00 0.00 2.32
576 606 8.024865 TCAATGCTCATTCTCTGTAAACAAATG 58.975 33.333 0.00 1.31 0.00 2.32
577 607 6.882610 TGCTCATTCTCTGTAAACAAATGT 57.117 33.333 6.10 0.00 0.00 2.71
578 608 7.977789 TGCTCATTCTCTGTAAACAAATGTA 57.022 32.000 6.10 0.00 0.00 2.29
579 609 8.389779 TGCTCATTCTCTGTAAACAAATGTAA 57.610 30.769 6.10 0.00 0.00 2.41
580 610 8.506437 TGCTCATTCTCTGTAAACAAATGTAAG 58.494 33.333 6.10 0.89 0.00 2.34
581 611 8.721478 GCTCATTCTCTGTAAACAAATGTAAGA 58.279 33.333 6.10 0.00 0.00 2.10
583 613 9.554395 TCATTCTCTGTAAACAAATGTAAGACA 57.446 29.630 6.10 0.00 0.00 3.41
600 630 8.263940 TGTAAGACATTTTATAAGTCACTGGC 57.736 34.615 6.23 0.00 34.80 4.85
601 631 7.880713 TGTAAGACATTTTATAAGTCACTGGCA 59.119 33.333 6.23 0.00 34.80 4.92
602 632 7.759489 AAGACATTTTATAAGTCACTGGCAA 57.241 32.000 6.23 0.00 34.80 4.52
603 633 7.383102 AGACATTTTATAAGTCACTGGCAAG 57.617 36.000 6.23 0.00 34.80 4.01
604 634 6.942576 AGACATTTTATAAGTCACTGGCAAGT 59.057 34.615 0.00 0.00 36.98 3.16
613 643 2.793831 ACTGGCAAGTGACCACAAC 58.206 52.632 0.00 0.00 34.48 3.32
614 644 0.034574 ACTGGCAAGTGACCACAACA 60.035 50.000 0.00 0.00 34.48 3.33
615 645 1.321474 CTGGCAAGTGACCACAACAT 58.679 50.000 2.78 0.00 32.49 2.71
616 646 2.158682 ACTGGCAAGTGACCACAACATA 60.159 45.455 0.00 0.00 34.48 2.29
617 647 3.084039 CTGGCAAGTGACCACAACATAT 58.916 45.455 2.78 0.00 32.49 1.78
618 648 3.495331 TGGCAAGTGACCACAACATATT 58.505 40.909 2.78 0.00 30.29 1.28
619 649 4.657013 TGGCAAGTGACCACAACATATTA 58.343 39.130 2.78 0.00 30.29 0.98
620 650 4.457603 TGGCAAGTGACCACAACATATTAC 59.542 41.667 2.78 0.00 30.29 1.89
621 651 4.457603 GGCAAGTGACCACAACATATTACA 59.542 41.667 2.78 0.00 0.00 2.41
622 652 5.048364 GGCAAGTGACCACAACATATTACAA 60.048 40.000 2.78 0.00 0.00 2.41
623 653 6.442952 GCAAGTGACCACAACATATTACAAA 58.557 36.000 2.78 0.00 0.00 2.83
624 654 6.582295 GCAAGTGACCACAACATATTACAAAG 59.418 38.462 2.78 0.00 0.00 2.77
625 655 6.817765 AGTGACCACAACATATTACAAAGG 57.182 37.500 2.78 0.00 0.00 3.11
626 656 6.303839 AGTGACCACAACATATTACAAAGGT 58.696 36.000 2.78 0.00 0.00 3.50
627 657 7.455058 AGTGACCACAACATATTACAAAGGTA 58.545 34.615 2.78 0.00 0.00 3.08
628 658 7.389607 AGTGACCACAACATATTACAAAGGTAC 59.610 37.037 2.78 0.00 0.00 3.34
629 659 6.655848 TGACCACAACATATTACAAAGGTACC 59.344 38.462 2.73 2.73 0.00 3.34
630 660 6.786122 ACCACAACATATTACAAAGGTACCT 58.214 36.000 9.21 9.21 0.00 3.08
631 661 7.235804 ACCACAACATATTACAAAGGTACCTT 58.764 34.615 21.96 21.96 37.98 3.50
632 662 7.392393 ACCACAACATATTACAAAGGTACCTTC 59.608 37.037 27.24 0.00 34.84 3.46
633 663 7.148137 CCACAACATATTACAAAGGTACCTTCC 60.148 40.741 27.24 0.00 34.84 3.46
634 664 7.610305 CACAACATATTACAAAGGTACCTTCCT 59.390 37.037 27.24 16.83 39.84 3.36
635 665 8.828751 ACAACATATTACAAAGGTACCTTCCTA 58.171 33.333 27.24 15.85 36.74 2.94
636 666 9.106070 CAACATATTACAAAGGTACCTTCCTAC 57.894 37.037 27.24 0.00 36.74 3.18
637 667 8.619683 ACATATTACAAAGGTACCTTCCTACT 57.380 34.615 27.24 14.84 36.74 2.57
638 668 8.702819 ACATATTACAAAGGTACCTTCCTACTC 58.297 37.037 27.24 0.00 36.74 2.59
639 669 8.925338 CATATTACAAAGGTACCTTCCTACTCT 58.075 37.037 27.24 7.29 36.74 3.24
642 672 8.906238 TTACAAAGGTACCTTCCTACTCTATT 57.094 34.615 27.24 4.96 36.74 1.73
643 673 7.809880 ACAAAGGTACCTTCCTACTCTATTT 57.190 36.000 27.24 4.42 36.74 1.40
644 674 8.906238 ACAAAGGTACCTTCCTACTCTATTTA 57.094 34.615 27.24 0.00 36.74 1.40
645 675 8.979534 ACAAAGGTACCTTCCTACTCTATTTAG 58.020 37.037 27.24 5.35 36.74 1.85
646 676 9.198475 CAAAGGTACCTTCCTACTCTATTTAGA 57.802 37.037 27.24 0.00 36.74 2.10
647 677 9.954992 AAAGGTACCTTCCTACTCTATTTAGAT 57.045 33.333 27.24 2.66 36.74 1.98
648 678 9.590828 AAGGTACCTTCCTACTCTATTTAGATC 57.409 37.037 21.96 0.00 36.74 2.75
649 679 7.884354 AGGTACCTTCCTACTCTATTTAGATCG 59.116 40.741 9.21 0.00 35.87 3.69
650 680 7.882271 GGTACCTTCCTACTCTATTTAGATCGA 59.118 40.741 4.06 0.00 0.00 3.59
651 681 9.282569 GTACCTTCCTACTCTATTTAGATCGAA 57.717 37.037 0.00 0.00 0.00 3.71
652 682 8.763984 ACCTTCCTACTCTATTTAGATCGAAA 57.236 34.615 3.34 3.34 0.00 3.46
653 683 8.852135 ACCTTCCTACTCTATTTAGATCGAAAG 58.148 37.037 7.11 0.00 0.00 2.62
694 724 9.593134 AAACTCAATTATTTTTGTACAGCAACA 57.407 25.926 0.00 0.00 36.72 3.33
695 725 9.593134 AACTCAATTATTTTTGTACAGCAACAA 57.407 25.926 0.00 0.00 36.72 2.83
696 726 9.030301 ACTCAATTATTTTTGTACAGCAACAAC 57.970 29.630 0.00 0.00 39.02 3.32
697 727 8.932945 TCAATTATTTTTGTACAGCAACAACA 57.067 26.923 0.00 0.00 39.02 3.33
698 728 9.371136 TCAATTATTTTTGTACAGCAACAACAA 57.629 25.926 0.00 0.92 39.02 2.83
699 729 9.419737 CAATTATTTTTGTACAGCAACAACAAC 57.580 29.630 0.00 0.00 39.02 3.32
700 730 8.709386 ATTATTTTTGTACAGCAACAACAACA 57.291 26.923 0.00 0.00 39.02 3.33
701 731 8.534333 TTATTTTTGTACAGCAACAACAACAA 57.466 26.923 0.00 0.00 39.02 2.83
702 732 5.830900 TTTTGTACAGCAACAACAACAAC 57.169 34.783 0.00 0.00 39.02 3.32
703 733 4.505313 TTGTACAGCAACAACAACAACA 57.495 36.364 0.00 0.00 34.50 3.33
704 734 4.505313 TGTACAGCAACAACAACAACAA 57.495 36.364 0.00 0.00 0.00 2.83
705 735 4.480541 TGTACAGCAACAACAACAACAAG 58.519 39.130 0.00 0.00 0.00 3.16
706 736 3.932545 ACAGCAACAACAACAACAAGA 57.067 38.095 0.00 0.00 0.00 3.02
707 737 4.250116 ACAGCAACAACAACAACAAGAA 57.750 36.364 0.00 0.00 0.00 2.52
708 738 3.987220 ACAGCAACAACAACAACAAGAAC 59.013 39.130 0.00 0.00 0.00 3.01
709 739 4.236935 CAGCAACAACAACAACAAGAACT 58.763 39.130 0.00 0.00 0.00 3.01
710 740 4.324402 CAGCAACAACAACAACAAGAACTC 59.676 41.667 0.00 0.00 0.00 3.01
711 741 3.300590 GCAACAACAACAACAAGAACTCG 59.699 43.478 0.00 0.00 0.00 4.18
712 742 4.472286 CAACAACAACAACAAGAACTCGT 58.528 39.130 0.00 0.00 0.00 4.18
713 743 4.336532 ACAACAACAACAAGAACTCGTC 57.663 40.909 0.00 0.00 0.00 4.20
714 744 4.000988 ACAACAACAACAAGAACTCGTCT 58.999 39.130 0.00 0.00 38.69 4.18
716 746 5.048991 ACAACAACAACAAGAACTCGTCTTT 60.049 36.000 0.00 0.00 44.64 2.52
717 747 6.148150 ACAACAACAACAAGAACTCGTCTTTA 59.852 34.615 0.00 0.00 44.64 1.85
718 748 6.103222 ACAACAACAAGAACTCGTCTTTAC 57.897 37.500 0.00 0.00 44.64 2.01
719 749 5.188194 CAACAACAAGAACTCGTCTTTACG 58.812 41.667 0.00 0.00 44.64 3.18
720 750 3.800506 ACAACAAGAACTCGTCTTTACGG 59.199 43.478 0.00 0.00 44.64 4.02
721 751 3.996150 ACAAGAACTCGTCTTTACGGA 57.004 42.857 0.00 0.00 44.64 4.69
722 752 3.898529 ACAAGAACTCGTCTTTACGGAG 58.101 45.455 0.00 0.00 44.64 4.63
723 753 3.317430 ACAAGAACTCGTCTTTACGGAGT 59.683 43.478 0.00 0.00 44.64 3.85
724 754 3.669122 CAAGAACTCGTCTTTACGGAGTG 59.331 47.826 0.00 0.00 44.64 3.51
725 755 3.317430 AAGAACTCGTCTTTACGGAGTGT 59.683 43.478 0.00 0.00 44.64 3.55
726 756 4.516698 AAGAACTCGTCTTTACGGAGTGTA 59.483 41.667 0.00 0.00 44.64 2.90
727 757 5.334724 AAGAACTCGTCTTTACGGAGTGTAG 60.335 44.000 0.00 0.00 44.64 2.74
728 758 8.219908 AAGAACTCGTCTTTACGGAGTGTAGG 62.220 46.154 0.00 0.00 44.64 3.18
731 761 4.367386 CGTCTTTACGGAGTGTAGGATT 57.633 45.455 0.00 0.00 45.73 3.01
732 762 4.103357 CGTCTTTACGGAGTGTAGGATTG 58.897 47.826 0.00 0.00 45.73 2.67
733 763 4.380233 CGTCTTTACGGAGTGTAGGATTGT 60.380 45.833 0.00 0.00 45.73 2.71
734 764 5.476614 GTCTTTACGGAGTGTAGGATTGTT 58.523 41.667 0.00 0.00 45.73 2.83
735 765 5.930569 GTCTTTACGGAGTGTAGGATTGTTT 59.069 40.000 0.00 0.00 45.73 2.83
736 766 7.092716 GTCTTTACGGAGTGTAGGATTGTTTA 58.907 38.462 0.00 0.00 45.73 2.01
737 767 7.763071 GTCTTTACGGAGTGTAGGATTGTTTAT 59.237 37.037 0.00 0.00 45.73 1.40
738 768 8.316214 TCTTTACGGAGTGTAGGATTGTTTATT 58.684 33.333 0.00 0.00 45.73 1.40
739 769 8.851541 TTTACGGAGTGTAGGATTGTTTATTT 57.148 30.769 0.00 0.00 45.73 1.40
740 770 8.851541 TTACGGAGTGTAGGATTGTTTATTTT 57.148 30.769 0.00 0.00 45.73 1.82
741 771 7.373778 ACGGAGTGTAGGATTGTTTATTTTC 57.626 36.000 0.00 0.00 42.51 2.29
742 772 6.373495 ACGGAGTGTAGGATTGTTTATTTTCC 59.627 38.462 0.00 0.00 42.51 3.13
743 773 6.598064 CGGAGTGTAGGATTGTTTATTTTCCT 59.402 38.462 0.00 0.00 41.43 3.36
744 774 7.120726 CGGAGTGTAGGATTGTTTATTTTCCTT 59.879 37.037 0.00 0.00 39.33 3.36
745 775 8.803235 GGAGTGTAGGATTGTTTATTTTCCTTT 58.197 33.333 0.00 0.00 39.33 3.11
763 793 9.695155 TTTTCCTTTTACAATAGAATAGGAGGG 57.305 33.333 0.00 0.00 32.39 4.30
764 794 8.632731 TTCCTTTTACAATAGAATAGGAGGGA 57.367 34.615 0.00 0.00 32.39 4.20
765 795 8.632731 TCCTTTTACAATAGAATAGGAGGGAA 57.367 34.615 0.00 0.00 0.00 3.97
766 796 9.064602 TCCTTTTACAATAGAATAGGAGGGAAA 57.935 33.333 0.00 0.00 0.00 3.13
767 797 9.868160 CCTTTTACAATAGAATAGGAGGGAAAT 57.132 33.333 0.00 0.00 0.00 2.17
772 802 8.986929 ACAATAGAATAGGAGGGAAATTCAAG 57.013 34.615 0.00 0.00 33.06 3.02
773 803 8.560903 ACAATAGAATAGGAGGGAAATTCAAGT 58.439 33.333 0.00 0.00 33.06 3.16
774 804 8.844244 CAATAGAATAGGAGGGAAATTCAAGTG 58.156 37.037 0.00 0.00 33.06 3.16
775 805 5.196695 AGAATAGGAGGGAAATTCAAGTGC 58.803 41.667 0.00 0.00 33.06 4.40
776 806 2.978156 AGGAGGGAAATTCAAGTGCA 57.022 45.000 0.00 0.00 0.00 4.57
777 807 3.243359 AGGAGGGAAATTCAAGTGCAA 57.757 42.857 0.00 0.00 0.00 4.08
778 808 2.893489 AGGAGGGAAATTCAAGTGCAAC 59.107 45.455 0.00 0.00 0.00 4.17
779 809 2.351738 GGAGGGAAATTCAAGTGCAACG 60.352 50.000 0.00 0.00 45.86 4.10
780 810 2.293399 GAGGGAAATTCAAGTGCAACGT 59.707 45.455 0.00 0.00 45.86 3.99
781 811 3.482436 AGGGAAATTCAAGTGCAACGTA 58.518 40.909 0.00 0.00 45.86 3.57
782 812 4.079253 AGGGAAATTCAAGTGCAACGTAT 58.921 39.130 0.00 0.00 45.86 3.06
783 813 4.082787 AGGGAAATTCAAGTGCAACGTATG 60.083 41.667 0.00 0.00 45.86 2.39
784 814 4.320935 GGGAAATTCAAGTGCAACGTATGT 60.321 41.667 0.00 0.00 45.86 2.29
785 815 4.616802 GGAAATTCAAGTGCAACGTATGTG 59.383 41.667 0.00 0.00 45.86 3.21
786 816 2.679355 TTCAAGTGCAACGTATGTGC 57.321 45.000 3.73 3.73 45.86 4.57
787 817 1.877637 TCAAGTGCAACGTATGTGCT 58.122 45.000 11.66 2.56 45.86 4.40
788 818 1.530720 TCAAGTGCAACGTATGTGCTG 59.469 47.619 11.66 2.78 45.86 4.41
789 819 1.264020 CAAGTGCAACGTATGTGCTGT 59.736 47.619 11.66 0.00 45.86 4.40
790 820 2.448926 AGTGCAACGTATGTGCTGTA 57.551 45.000 11.66 0.00 45.86 2.74
791 821 2.761559 AGTGCAACGTATGTGCTGTAA 58.238 42.857 11.66 0.00 45.86 2.41
792 822 3.135225 AGTGCAACGTATGTGCTGTAAA 58.865 40.909 11.66 0.00 45.86 2.01
793 823 3.059188 AGTGCAACGTATGTGCTGTAAAC 60.059 43.478 11.66 1.87 45.86 2.01
794 824 2.872858 TGCAACGTATGTGCTGTAAACA 59.127 40.909 11.66 0.00 0.00 2.83
795 825 3.312697 TGCAACGTATGTGCTGTAAACAA 59.687 39.130 11.66 0.00 0.00 2.83
796 826 3.906008 GCAACGTATGTGCTGTAAACAAG 59.094 43.478 3.46 0.00 0.00 3.16
797 827 4.553938 GCAACGTATGTGCTGTAAACAAGT 60.554 41.667 3.46 0.00 0.00 3.16
798 828 4.725556 ACGTATGTGCTGTAAACAAGTG 57.274 40.909 0.00 0.00 0.00 3.16
799 829 3.059188 ACGTATGTGCTGTAAACAAGTGC 60.059 43.478 0.00 0.00 0.00 4.40
800 830 3.059257 CGTATGTGCTGTAAACAAGTGCA 60.059 43.478 0.00 0.00 0.00 4.57
801 831 4.553742 CGTATGTGCTGTAAACAAGTGCAA 60.554 41.667 0.00 0.00 35.34 4.08
802 832 3.143807 TGTGCTGTAAACAAGTGCAAC 57.856 42.857 0.00 0.00 35.34 4.17
803 833 2.489722 TGTGCTGTAAACAAGTGCAACA 59.510 40.909 0.00 0.00 41.43 3.33
804 834 2.851824 GTGCTGTAAACAAGTGCAACAC 59.148 45.455 0.00 0.00 41.43 3.32
805 835 2.489722 TGCTGTAAACAAGTGCAACACA 59.510 40.909 0.00 0.00 41.43 3.72
806 836 3.130164 TGCTGTAAACAAGTGCAACACAT 59.870 39.130 0.00 0.00 41.43 3.21
807 837 4.336713 TGCTGTAAACAAGTGCAACACATA 59.663 37.500 0.00 0.00 41.43 2.29
808 838 4.675114 GCTGTAAACAAGTGCAACACATAC 59.325 41.667 0.00 0.00 41.43 2.39
809 839 5.731967 GCTGTAAACAAGTGCAACACATACA 60.732 40.000 0.00 0.00 41.43 2.29
810 840 6.384258 TGTAAACAAGTGCAACACATACAT 57.616 33.333 0.00 0.00 41.43 2.29
811 841 7.497925 TGTAAACAAGTGCAACACATACATA 57.502 32.000 0.00 0.00 41.43 2.29
812 842 8.105097 TGTAAACAAGTGCAACACATACATAT 57.895 30.769 0.00 0.00 41.43 1.78
813 843 8.572185 TGTAAACAAGTGCAACACATACATATT 58.428 29.630 0.00 0.00 41.43 1.28
814 844 9.405587 GTAAACAAGTGCAACACATACATATTT 57.594 29.630 0.00 0.00 41.43 1.40
816 846 8.964420 AACAAGTGCAACACATACATATTTAC 57.036 30.769 0.00 0.00 41.43 2.01
817 847 7.240674 ACAAGTGCAACACATACATATTTACG 58.759 34.615 0.00 0.00 41.43 3.18
818 848 6.978343 AGTGCAACACATACATATTTACGT 57.022 33.333 0.00 0.00 41.43 3.57
819 849 8.384365 CAAGTGCAACACATACATATTTACGTA 58.616 33.333 0.00 0.00 41.43 3.57
820 850 8.657074 AGTGCAACACATACATATTTACGTAT 57.343 30.769 0.00 0.00 41.43 3.06
821 851 8.547894 AGTGCAACACATACATATTTACGTATG 58.452 33.333 0.00 7.76 46.77 2.39
828 858 7.351414 CATACATATTTACGTATGTGCTGCT 57.649 36.000 11.12 0.00 43.27 4.24
829 859 5.907197 ACATATTTACGTATGTGCTGCTC 57.093 39.130 0.00 0.00 42.20 4.26
830 860 4.750098 ACATATTTACGTATGTGCTGCTCC 59.250 41.667 0.00 0.00 42.20 4.70
831 861 2.753055 TTTACGTATGTGCTGCTCCA 57.247 45.000 0.00 0.00 0.00 3.86
832 862 2.293677 TTACGTATGTGCTGCTCCAG 57.706 50.000 0.00 0.00 34.12 3.86
852 882 4.124943 CAGCCCAGCCCAGCTCAT 62.125 66.667 0.00 0.00 36.40 2.90
853 883 3.345028 AGCCCAGCCCAGCTCATT 61.345 61.111 0.00 0.00 36.40 2.57
854 884 2.002977 AGCCCAGCCCAGCTCATTA 61.003 57.895 0.00 0.00 36.40 1.90
855 885 1.152368 GCCCAGCCCAGCTCATTAT 59.848 57.895 0.00 0.00 36.40 1.28
856 886 0.892814 GCCCAGCCCAGCTCATTATC 60.893 60.000 0.00 0.00 36.40 1.75
857 887 0.475475 CCCAGCCCAGCTCATTATCA 59.525 55.000 0.00 0.00 36.40 2.15
858 888 1.544982 CCCAGCCCAGCTCATTATCAG 60.545 57.143 0.00 0.00 36.40 2.90
859 889 1.419012 CCAGCCCAGCTCATTATCAGA 59.581 52.381 0.00 0.00 36.40 3.27
860 890 2.040012 CCAGCCCAGCTCATTATCAGAT 59.960 50.000 0.00 0.00 36.40 2.90
861 891 3.336468 CAGCCCAGCTCATTATCAGATC 58.664 50.000 0.00 0.00 36.40 2.75
862 892 2.977580 AGCCCAGCTCATTATCAGATCA 59.022 45.455 0.00 0.00 30.62 2.92
863 893 3.008157 AGCCCAGCTCATTATCAGATCAG 59.992 47.826 0.00 0.00 30.62 2.90
864 894 3.007723 GCCCAGCTCATTATCAGATCAGA 59.992 47.826 0.00 0.00 0.00 3.27
865 895 4.323638 GCCCAGCTCATTATCAGATCAGAT 60.324 45.833 5.86 5.86 0.00 2.90
866 896 5.179533 CCCAGCTCATTATCAGATCAGATG 58.820 45.833 10.66 0.00 0.00 2.90
867 897 5.280062 CCCAGCTCATTATCAGATCAGATGT 60.280 44.000 10.66 0.00 0.00 3.06
868 898 5.639931 CCAGCTCATTATCAGATCAGATGTG 59.360 44.000 10.66 9.24 0.00 3.21
869 899 6.456501 CAGCTCATTATCAGATCAGATGTGA 58.543 40.000 12.47 12.47 36.95 3.58
870 900 6.588373 CAGCTCATTATCAGATCAGATGTGAG 59.412 42.308 24.95 24.95 40.81 3.51
871 901 6.494146 AGCTCATTATCAGATCAGATGTGAGA 59.506 38.462 29.12 8.45 40.59 3.27
872 902 6.809689 GCTCATTATCAGATCAGATGTGAGAG 59.190 42.308 29.12 21.37 40.59 3.20
873 903 7.524202 GCTCATTATCAGATCAGATGTGAGAGT 60.524 40.741 29.12 5.50 40.59 3.24
874 904 7.884257 TCATTATCAGATCAGATGTGAGAGTC 58.116 38.462 15.10 0.00 35.91 3.36
875 905 4.834357 ATCAGATCAGATGTGAGAGTCG 57.166 45.455 15.10 0.00 35.91 4.18
876 906 3.878778 TCAGATCAGATGTGAGAGTCGA 58.121 45.455 6.14 0.00 35.66 4.20
877 907 3.876320 TCAGATCAGATGTGAGAGTCGAG 59.124 47.826 6.14 0.00 35.66 4.04
878 908 3.876320 CAGATCAGATGTGAGAGTCGAGA 59.124 47.826 1.00 0.00 35.66 4.04
879 909 4.024641 CAGATCAGATGTGAGAGTCGAGAG 60.025 50.000 1.00 0.00 35.66 3.20
880 910 3.618690 TCAGATGTGAGAGTCGAGAGA 57.381 47.619 0.00 0.00 38.16 3.10
892 922 1.149148 TCGAGAGACACTGTCTGACG 58.851 55.000 16.69 18.68 43.53 4.35
893 923 1.149148 CGAGAGACACTGTCTGACGA 58.851 55.000 16.69 0.00 43.53 4.20
894 924 1.127766 CGAGAGACACTGTCTGACGAG 59.872 57.143 16.69 4.74 43.53 4.18
895 925 2.147958 GAGAGACACTGTCTGACGAGT 58.852 52.381 16.69 5.35 43.53 4.18
896 926 1.876799 AGAGACACTGTCTGACGAGTG 59.123 52.381 25.21 25.21 43.53 3.51
897 927 0.955178 AGACACTGTCTGACGAGTGG 59.045 55.000 27.80 17.62 41.76 4.00
898 928 0.039074 GACACTGTCTGACGAGTGGG 60.039 60.000 27.80 14.11 43.33 4.61
899 929 1.290324 CACTGTCTGACGAGTGGGG 59.710 63.158 21.99 6.96 36.69 4.96
900 930 2.262915 CTGTCTGACGAGTGGGGC 59.737 66.667 2.98 0.00 0.00 5.80
901 931 3.302347 CTGTCTGACGAGTGGGGCC 62.302 68.421 0.00 0.00 0.00 5.80
902 932 3.311110 GTCTGACGAGTGGGGCCA 61.311 66.667 4.39 0.00 0.00 5.36
903 933 3.311110 TCTGACGAGTGGGGCCAC 61.311 66.667 4.39 0.00 46.50 5.01
911 941 2.674380 GTGGGGCCACTTGCTCAG 60.674 66.667 6.53 0.00 44.86 3.35
912 942 4.666253 TGGGGCCACTTGCTCAGC 62.666 66.667 6.53 0.00 44.86 4.26
913 943 4.357279 GGGGCCACTTGCTCAGCT 62.357 66.667 4.39 0.00 44.86 4.24
914 944 2.282745 GGGCCACTTGCTCAGCTT 60.283 61.111 4.39 0.00 41.53 3.74
915 945 2.338785 GGGCCACTTGCTCAGCTTC 61.339 63.158 4.39 0.00 41.53 3.86
916 946 1.601759 GGCCACTTGCTCAGCTTCA 60.602 57.895 0.00 0.00 40.92 3.02
917 947 1.584380 GGCCACTTGCTCAGCTTCAG 61.584 60.000 0.00 0.00 40.92 3.02
918 948 1.874562 CCACTTGCTCAGCTTCAGC 59.125 57.895 0.00 7.40 42.49 4.26
919 949 0.887836 CCACTTGCTCAGCTTCAGCA 60.888 55.000 12.31 12.31 45.32 4.41
922 952 4.391869 TGCTCAGCTTCAGCAAGG 57.608 55.556 13.70 0.00 44.02 3.61
923 953 1.453235 TGCTCAGCTTCAGCAAGGT 59.547 52.632 13.70 0.00 44.02 3.50
924 954 0.604780 TGCTCAGCTTCAGCAAGGTC 60.605 55.000 13.70 0.00 44.02 3.85
925 955 1.304509 GCTCAGCTTCAGCAAGGTCC 61.305 60.000 9.22 0.00 45.16 4.46
926 956 1.004560 TCAGCTTCAGCAAGGTCCG 60.005 57.895 0.75 0.00 45.16 4.79
927 957 1.004560 CAGCTTCAGCAAGGTCCGA 60.005 57.895 0.75 0.00 45.16 4.55
928 958 1.018226 CAGCTTCAGCAAGGTCCGAG 61.018 60.000 0.75 0.00 45.16 4.63
929 959 2.394563 GCTTCAGCAAGGTCCGAGC 61.395 63.158 0.00 0.77 41.59 5.03
930 960 1.004560 CTTCAGCAAGGTCCGAGCA 60.005 57.895 10.61 0.00 0.00 4.26
931 961 1.004560 TTCAGCAAGGTCCGAGCAG 60.005 57.895 10.61 3.51 0.00 4.24
932 962 1.471829 TTCAGCAAGGTCCGAGCAGA 61.472 55.000 10.61 5.65 0.00 4.26
933 963 1.220206 CAGCAAGGTCCGAGCAGAT 59.780 57.895 10.61 0.00 0.00 2.90
934 964 0.809241 CAGCAAGGTCCGAGCAGATC 60.809 60.000 10.61 0.00 0.00 2.75
935 965 1.219124 GCAAGGTCCGAGCAGATCA 59.781 57.895 0.00 0.00 0.00 2.92
936 966 1.086634 GCAAGGTCCGAGCAGATCAC 61.087 60.000 0.00 0.00 0.00 3.06
937 967 0.247460 CAAGGTCCGAGCAGATCACA 59.753 55.000 0.00 0.00 0.00 3.58
938 968 0.247736 AAGGTCCGAGCAGATCACAC 59.752 55.000 0.00 0.00 0.00 3.82
939 969 1.153549 GGTCCGAGCAGATCACACC 60.154 63.158 0.00 0.00 0.00 4.16
940 970 1.591703 GTCCGAGCAGATCACACCA 59.408 57.895 0.00 0.00 0.00 4.17
941 971 0.737715 GTCCGAGCAGATCACACCAC 60.738 60.000 0.00 0.00 0.00 4.16
942 972 1.807165 CCGAGCAGATCACACCACG 60.807 63.158 0.00 0.00 0.00 4.94
943 973 2.447887 CGAGCAGATCACACCACGC 61.448 63.158 0.00 0.00 0.00 5.34
944 974 1.374631 GAGCAGATCACACCACGCA 60.375 57.895 0.00 0.00 0.00 5.24
945 975 0.950555 GAGCAGATCACACCACGCAA 60.951 55.000 0.00 0.00 0.00 4.85
946 976 0.534877 AGCAGATCACACCACGCAAA 60.535 50.000 0.00 0.00 0.00 3.68
947 977 0.523072 GCAGATCACACCACGCAAAT 59.477 50.000 0.00 0.00 0.00 2.32
948 978 1.466360 GCAGATCACACCACGCAAATC 60.466 52.381 0.00 0.00 0.00 2.17
949 979 2.079158 CAGATCACACCACGCAAATCT 58.921 47.619 0.00 0.00 0.00 2.40
950 980 2.094894 CAGATCACACCACGCAAATCTC 59.905 50.000 0.00 0.00 0.00 2.75
951 981 2.027745 AGATCACACCACGCAAATCTCT 60.028 45.455 0.00 0.00 0.00 3.10
952 982 1.795768 TCACACCACGCAAATCTCTC 58.204 50.000 0.00 0.00 0.00 3.20
953 983 1.344438 TCACACCACGCAAATCTCTCT 59.656 47.619 0.00 0.00 0.00 3.10
954 984 1.728971 CACACCACGCAAATCTCTCTC 59.271 52.381 0.00 0.00 0.00 3.20
955 985 0.994995 CACCACGCAAATCTCTCTCG 59.005 55.000 0.00 0.00 0.00 4.04
956 986 0.737715 ACCACGCAAATCTCTCTCGC 60.738 55.000 0.00 0.00 0.00 5.03
957 987 0.737367 CCACGCAAATCTCTCTCGCA 60.737 55.000 0.00 0.00 0.00 5.10
958 988 0.368227 CACGCAAATCTCTCTCGCAC 59.632 55.000 0.00 0.00 0.00 5.34
959 989 0.737715 ACGCAAATCTCTCTCGCACC 60.738 55.000 0.00 0.00 0.00 5.01
960 990 0.737367 CGCAAATCTCTCTCGCACCA 60.737 55.000 0.00 0.00 0.00 4.17
961 991 0.723981 GCAAATCTCTCTCGCACCAC 59.276 55.000 0.00 0.00 0.00 4.16
962 992 1.363744 CAAATCTCTCTCGCACCACC 58.636 55.000 0.00 0.00 0.00 4.61
963 993 0.108615 AAATCTCTCTCGCACCACCG 60.109 55.000 0.00 0.00 0.00 4.94
964 994 2.564553 AATCTCTCTCGCACCACCGC 62.565 60.000 0.00 0.00 0.00 5.68
965 995 4.803426 CTCTCTCGCACCACCGCC 62.803 72.222 0.00 0.00 0.00 6.13
1051 1081 1.911471 CTGCTCCCTTCTTCCTCCC 59.089 63.158 0.00 0.00 0.00 4.30
1052 1082 0.620121 CTGCTCCCTTCTTCCTCCCT 60.620 60.000 0.00 0.00 0.00 4.20
1057 1090 0.043334 CCCTTCTTCCTCCCTCTCCA 59.957 60.000 0.00 0.00 0.00 3.86
1067 1106 1.231751 TCCCTCTCCACCATCTCCCT 61.232 60.000 0.00 0.00 0.00 4.20
1068 1107 0.762461 CCCTCTCCACCATCTCCCTC 60.762 65.000 0.00 0.00 0.00 4.30
1069 1108 0.762461 CCTCTCCACCATCTCCCTCC 60.762 65.000 0.00 0.00 0.00 4.30
1075 1114 1.112315 CACCATCTCCCTCCCTCTCG 61.112 65.000 0.00 0.00 0.00 4.04
1120 1165 2.909549 GCCGTTTCCCCCAACCCTA 61.910 63.158 0.00 0.00 0.00 3.53
1332 1383 0.668535 GCGCCAAAGTGGAGAAAACT 59.331 50.000 0.00 0.00 39.92 2.66
1427 1478 1.153881 GTGAGTCCTTCCGCCGTAC 60.154 63.158 0.00 0.00 0.00 3.67
1440 1491 1.807226 CCGTACATCTGTCGCCTCA 59.193 57.895 0.00 0.00 0.00 3.86
1495 1546 1.823041 GACGACCTCCTCCGGGTAG 60.823 68.421 0.00 0.00 37.17 3.18
1503 1560 0.410663 TCCTCCGGGTAGTCCAGAAA 59.589 55.000 0.00 0.00 34.36 2.52
1540 1597 2.126031 GCGACCTCGACAGGGTTC 60.126 66.667 0.00 0.00 45.53 3.62
1583 1640 1.827399 CTGGAGTGCGGGTTAGGTGT 61.827 60.000 0.00 0.00 0.00 4.16
1687 1747 1.494721 CCCAAGGTATAGGTGTGCCAT 59.505 52.381 0.00 0.00 37.19 4.40
1784 1856 4.991687 GGAACTCTTGAAGAAGACGTTCAT 59.008 41.667 19.84 0.00 41.78 2.57
1791 1863 3.181470 TGAAGAAGACGTTCATGTGGTCA 60.181 43.478 13.25 0.00 34.82 4.02
1803 1875 1.153549 GTGGTCAGATGCCGAGGTC 60.154 63.158 0.00 0.00 0.00 3.85
1805 1877 2.583593 GTCAGATGCCGAGGTCGC 60.584 66.667 0.00 0.00 38.18 5.19
2250 2322 3.395639 TGGTGGTTGTTAACGAGTGATC 58.604 45.455 0.26 0.00 0.00 2.92
2551 3011 9.790344 AGTGGATAATTTGAGGATAAATCTGAG 57.210 33.333 0.00 0.00 30.33 3.35
2693 3163 7.759433 TCTGTTTCCTCTTGTTTGAATTGTTTC 59.241 33.333 0.00 0.00 0.00 2.78
2694 3164 6.816140 TGTTTCCTCTTGTTTGAATTGTTTCC 59.184 34.615 0.00 0.00 0.00 3.13
2695 3165 6.790232 TTCCTCTTGTTTGAATTGTTTCCT 57.210 33.333 0.00 0.00 0.00 3.36
2696 3166 6.391227 TCCTCTTGTTTGAATTGTTTCCTC 57.609 37.500 0.00 0.00 0.00 3.71
2697 3167 6.129179 TCCTCTTGTTTGAATTGTTTCCTCT 58.871 36.000 0.00 0.00 0.00 3.69
2699 3169 6.698766 CCTCTTGTTTGAATTGTTTCCTCTTG 59.301 38.462 0.00 0.00 0.00 3.02
2840 3368 5.353394 TGGAGCCGAAACTAGATACAAAT 57.647 39.130 0.00 0.00 0.00 2.32
2936 3464 1.195115 GAGGTAGGACATGAGCCACA 58.805 55.000 0.00 0.00 0.00 4.17
3032 3560 2.182537 GCCAAATTCCTGCCTGCG 59.817 61.111 0.00 0.00 0.00 5.18
3041 3569 0.462581 TCCTGCCTGCGCTAAGAATG 60.463 55.000 9.73 0.00 35.36 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.855021 ATGTGTTTAAAAAGGAAATCCGATAAG 57.145 29.630 0.00 0.00 42.08 1.73
48 49 8.655651 TGTTCATGTGTTTAAAAAGGAAATCC 57.344 30.769 0.00 0.00 0.00 3.01
109 110 7.482474 TGACCATGTATTGTAAATGCTCATTG 58.518 34.615 0.00 0.00 0.00 2.82
184 187 1.692411 ACCCAGGAGCTGTTTTTCAC 58.308 50.000 0.00 0.00 0.00 3.18
191 194 2.683211 AAATCAAACCCAGGAGCTGT 57.317 45.000 0.00 0.00 0.00 4.40
199 202 2.108601 ACCCCGTTCTAAATCAAACCCA 59.891 45.455 0.00 0.00 0.00 4.51
214 217 2.848071 ACCCTAAACATATCAACCCCGT 59.152 45.455 0.00 0.00 0.00 5.28
226 229 0.470766 AGTCGTTGGCACCCTAAACA 59.529 50.000 0.00 0.00 0.00 2.83
230 233 0.040058 TCCTAGTCGTTGGCACCCTA 59.960 55.000 0.00 0.00 0.00 3.53
245 248 3.377485 CGAACTTCCGACTCTGAATCCTA 59.623 47.826 0.00 0.00 0.00 2.94
246 249 2.164624 CGAACTTCCGACTCTGAATCCT 59.835 50.000 0.00 0.00 0.00 3.24
256 259 4.026722 GCTTAGCTAAATCGAACTTCCGAC 60.027 45.833 7.74 0.00 41.70 4.79
261 264 6.864342 TGTAGAGCTTAGCTAAATCGAACTT 58.136 36.000 6.75 0.00 39.88 2.66
262 265 6.452494 TGTAGAGCTTAGCTAAATCGAACT 57.548 37.500 6.75 0.00 39.88 3.01
317 320 9.962783 CATCTCTTTCTTTGTCTCAATTTCTTT 57.037 29.630 0.00 0.00 0.00 2.52
319 322 7.941238 TCCATCTCTTTCTTTGTCTCAATTTCT 59.059 33.333 0.00 0.00 0.00 2.52
320 323 8.020244 GTCCATCTCTTTCTTTGTCTCAATTTC 58.980 37.037 0.00 0.00 0.00 2.17
321 324 7.308229 CGTCCATCTCTTTCTTTGTCTCAATTT 60.308 37.037 0.00 0.00 0.00 1.82
322 325 6.148480 CGTCCATCTCTTTCTTTGTCTCAATT 59.852 38.462 0.00 0.00 0.00 2.32
323 326 5.641209 CGTCCATCTCTTTCTTTGTCTCAAT 59.359 40.000 0.00 0.00 0.00 2.57
324 327 4.991056 CGTCCATCTCTTTCTTTGTCTCAA 59.009 41.667 0.00 0.00 0.00 3.02
328 331 4.561105 ACTCGTCCATCTCTTTCTTTGTC 58.439 43.478 0.00 0.00 0.00 3.18
343 346 0.179169 GTGGAGCGACTAACTCGTCC 60.179 60.000 0.00 0.00 44.92 4.79
345 348 0.522180 CTGTGGAGCGACTAACTCGT 59.478 55.000 0.00 0.00 44.92 4.18
346 349 0.798771 GCTGTGGAGCGACTAACTCG 60.799 60.000 0.00 0.00 45.97 4.18
347 350 3.037485 GCTGTGGAGCGACTAACTC 57.963 57.895 0.00 0.00 34.87 3.01
387 412 2.352960 CCGTCAGCCTCTAAAAATGAGC 59.647 50.000 0.00 0.00 0.00 4.26
434 459 1.152860 TGGTGATGGTTTGCGTGGT 60.153 52.632 0.00 0.00 0.00 4.16
435 460 1.172180 AGTGGTGATGGTTTGCGTGG 61.172 55.000 0.00 0.00 0.00 4.94
437 462 0.108585 AGAGTGGTGATGGTTTGCGT 59.891 50.000 0.00 0.00 0.00 5.24
438 463 0.518636 CAGAGTGGTGATGGTTTGCG 59.481 55.000 0.00 0.00 0.00 4.85
439 464 1.537202 GACAGAGTGGTGATGGTTTGC 59.463 52.381 0.00 0.00 0.00 3.68
440 465 3.070018 GAGACAGAGTGGTGATGGTTTG 58.930 50.000 0.00 0.00 0.00 2.93
450 480 0.817013 GGAGCAGAGAGACAGAGTGG 59.183 60.000 0.00 0.00 0.00 4.00
497 527 2.665185 GTATGATCCGGTGGCGCC 60.665 66.667 22.73 22.73 0.00 6.53
498 528 1.812686 TAGGTATGATCCGGTGGCGC 61.813 60.000 0.00 0.00 0.00 6.53
499 529 0.243907 CTAGGTATGATCCGGTGGCG 59.756 60.000 0.00 0.00 0.00 5.69
500 530 1.339097 ACTAGGTATGATCCGGTGGC 58.661 55.000 0.00 0.00 0.00 5.01
501 531 5.740290 AAATACTAGGTATGATCCGGTGG 57.260 43.478 0.00 0.00 0.00 4.61
502 532 7.393796 ACTCTAAATACTAGGTATGATCCGGTG 59.606 40.741 0.00 0.00 0.00 4.94
503 533 7.468496 ACTCTAAATACTAGGTATGATCCGGT 58.532 38.462 0.00 0.00 0.00 5.28
504 534 7.941431 ACTCTAAATACTAGGTATGATCCGG 57.059 40.000 0.00 0.00 0.00 5.14
505 535 9.627395 CAAACTCTAAATACTAGGTATGATCCG 57.373 37.037 0.00 0.00 0.00 4.18
506 536 9.425577 GCAAACTCTAAATACTAGGTATGATCC 57.574 37.037 0.00 0.00 0.00 3.36
507 537 9.425577 GGCAAACTCTAAATACTAGGTATGATC 57.574 37.037 0.00 0.00 0.00 2.92
508 538 9.160412 AGGCAAACTCTAAATACTAGGTATGAT 57.840 33.333 0.00 0.00 0.00 2.45
509 539 8.548880 AGGCAAACTCTAAATACTAGGTATGA 57.451 34.615 0.00 0.00 0.00 2.15
510 540 8.421784 TGAGGCAAACTCTAAATACTAGGTATG 58.578 37.037 0.00 0.00 46.72 2.39
511 541 8.548880 TGAGGCAAACTCTAAATACTAGGTAT 57.451 34.615 0.00 0.00 46.72 2.73
512 542 7.966339 TGAGGCAAACTCTAAATACTAGGTA 57.034 36.000 0.00 0.00 46.72 3.08
513 543 6.869206 TGAGGCAAACTCTAAATACTAGGT 57.131 37.500 0.00 0.00 46.72 3.08
514 544 8.738645 AATTGAGGCAAACTCTAAATACTAGG 57.261 34.615 0.00 0.00 46.72 3.02
515 545 9.994432 CAAATTGAGGCAAACTCTAAATACTAG 57.006 33.333 0.00 0.00 46.72 2.57
516 546 8.956426 CCAAATTGAGGCAAACTCTAAATACTA 58.044 33.333 0.00 0.00 46.72 1.82
517 547 7.451566 ACCAAATTGAGGCAAACTCTAAATACT 59.548 33.333 0.00 0.00 46.72 2.12
518 548 7.602753 ACCAAATTGAGGCAAACTCTAAATAC 58.397 34.615 0.00 0.00 46.72 1.89
519 549 7.775053 ACCAAATTGAGGCAAACTCTAAATA 57.225 32.000 0.00 0.00 46.72 1.40
520 550 6.670695 ACCAAATTGAGGCAAACTCTAAAT 57.329 33.333 0.00 0.00 46.72 1.40
521 551 6.015772 GGTACCAAATTGAGGCAAACTCTAAA 60.016 38.462 7.15 0.00 46.72 1.85
522 552 5.475564 GGTACCAAATTGAGGCAAACTCTAA 59.524 40.000 7.15 0.00 46.72 2.10
523 553 5.007682 GGTACCAAATTGAGGCAAACTCTA 58.992 41.667 7.15 0.00 46.72 2.43
524 554 3.826729 GGTACCAAATTGAGGCAAACTCT 59.173 43.478 7.15 0.00 46.72 3.24
525 555 3.365969 CGGTACCAAATTGAGGCAAACTC 60.366 47.826 13.54 0.00 46.78 3.01
526 556 2.556622 CGGTACCAAATTGAGGCAAACT 59.443 45.455 13.54 0.00 0.00 2.66
527 557 2.352323 CCGGTACCAAATTGAGGCAAAC 60.352 50.000 13.54 0.00 0.00 2.93
528 558 1.889829 CCGGTACCAAATTGAGGCAAA 59.110 47.619 13.54 0.00 0.00 3.68
529 559 1.074084 TCCGGTACCAAATTGAGGCAA 59.926 47.619 13.54 0.00 0.00 4.52
530 560 0.693622 TCCGGTACCAAATTGAGGCA 59.306 50.000 13.54 0.00 0.00 4.75
531 561 1.947456 GATCCGGTACCAAATTGAGGC 59.053 52.381 13.54 0.00 0.00 4.70
532 562 3.275617 TGATCCGGTACCAAATTGAGG 57.724 47.619 13.54 2.86 0.00 3.86
533 563 4.498009 GCATTGATCCGGTACCAAATTGAG 60.498 45.833 13.54 0.00 0.00 3.02
534 564 3.380004 GCATTGATCCGGTACCAAATTGA 59.620 43.478 13.54 0.11 0.00 2.57
535 565 3.381272 AGCATTGATCCGGTACCAAATTG 59.619 43.478 13.54 1.53 0.00 2.32
536 566 3.631250 AGCATTGATCCGGTACCAAATT 58.369 40.909 13.54 0.00 0.00 1.82
537 567 3.214328 GAGCATTGATCCGGTACCAAAT 58.786 45.455 13.54 4.05 0.00 2.32
538 568 2.026729 TGAGCATTGATCCGGTACCAAA 60.027 45.455 13.54 0.00 0.00 3.28
539 569 1.557371 TGAGCATTGATCCGGTACCAA 59.443 47.619 13.54 4.83 0.00 3.67
540 570 1.199615 TGAGCATTGATCCGGTACCA 58.800 50.000 13.54 0.00 0.00 3.25
541 571 2.550830 ATGAGCATTGATCCGGTACC 57.449 50.000 0.16 0.16 0.00 3.34
542 572 3.733337 AGAATGAGCATTGATCCGGTAC 58.267 45.455 0.00 0.00 0.00 3.34
543 573 3.643320 AGAGAATGAGCATTGATCCGGTA 59.357 43.478 0.00 0.00 0.00 4.02
544 574 2.437281 AGAGAATGAGCATTGATCCGGT 59.563 45.455 0.00 0.00 0.00 5.28
545 575 2.806818 CAGAGAATGAGCATTGATCCGG 59.193 50.000 0.00 0.00 0.00 5.14
546 576 3.464907 ACAGAGAATGAGCATTGATCCG 58.535 45.455 0.00 0.00 0.00 4.18
547 577 6.317140 TGTTTACAGAGAATGAGCATTGATCC 59.683 38.462 0.00 0.00 0.00 3.36
548 578 7.312657 TGTTTACAGAGAATGAGCATTGATC 57.687 36.000 0.00 0.00 0.00 2.92
549 579 7.692460 TTGTTTACAGAGAATGAGCATTGAT 57.308 32.000 0.00 0.00 0.00 2.57
550 580 7.509141 TTTGTTTACAGAGAATGAGCATTGA 57.491 32.000 0.00 0.00 0.00 2.57
551 581 7.811236 ACATTTGTTTACAGAGAATGAGCATTG 59.189 33.333 10.95 0.00 33.24 2.82
552 582 7.889469 ACATTTGTTTACAGAGAATGAGCATT 58.111 30.769 10.95 0.00 33.24 3.56
553 583 7.458409 ACATTTGTTTACAGAGAATGAGCAT 57.542 32.000 10.95 0.00 33.24 3.79
554 584 6.882610 ACATTTGTTTACAGAGAATGAGCA 57.117 33.333 10.95 0.00 33.24 4.26
555 585 8.721478 TCTTACATTTGTTTACAGAGAATGAGC 58.279 33.333 10.95 0.00 33.24 4.26
557 587 9.554395 TGTCTTACATTTGTTTACAGAGAATGA 57.446 29.630 10.95 0.00 33.24 2.57
574 604 8.893727 GCCAGTGACTTATAAAATGTCTTACAT 58.106 33.333 0.00 0.00 41.31 2.29
575 605 7.880713 TGCCAGTGACTTATAAAATGTCTTACA 59.119 33.333 0.00 0.00 0.00 2.41
576 606 8.263940 TGCCAGTGACTTATAAAATGTCTTAC 57.736 34.615 0.00 0.00 0.00 2.34
577 607 8.856153 TTGCCAGTGACTTATAAAATGTCTTA 57.144 30.769 0.00 0.00 0.00 2.10
578 608 7.448469 ACTTGCCAGTGACTTATAAAATGTCTT 59.552 33.333 0.00 0.00 0.00 3.01
579 609 6.942576 ACTTGCCAGTGACTTATAAAATGTCT 59.057 34.615 0.00 0.00 0.00 3.41
580 610 7.145932 ACTTGCCAGTGACTTATAAAATGTC 57.854 36.000 0.00 0.00 0.00 3.06
595 625 0.034574 TGTTGTGGTCACTTGCCAGT 60.035 50.000 2.66 0.00 36.57 4.00
596 626 1.321474 ATGTTGTGGTCACTTGCCAG 58.679 50.000 2.66 0.00 36.57 4.85
597 627 2.647683 TATGTTGTGGTCACTTGCCA 57.352 45.000 2.66 0.00 0.00 4.92
598 628 4.457603 TGTAATATGTTGTGGTCACTTGCC 59.542 41.667 2.66 0.00 0.00 4.52
599 629 5.621197 TGTAATATGTTGTGGTCACTTGC 57.379 39.130 2.66 0.00 0.00 4.01
600 630 7.083858 CCTTTGTAATATGTTGTGGTCACTTG 58.916 38.462 2.66 0.00 0.00 3.16
601 631 6.775629 ACCTTTGTAATATGTTGTGGTCACTT 59.224 34.615 2.66 0.00 0.00 3.16
602 632 6.303839 ACCTTTGTAATATGTTGTGGTCACT 58.696 36.000 2.66 0.00 0.00 3.41
603 633 6.569179 ACCTTTGTAATATGTTGTGGTCAC 57.431 37.500 0.00 0.00 0.00 3.67
604 634 6.655848 GGTACCTTTGTAATATGTTGTGGTCA 59.344 38.462 4.06 0.00 0.00 4.02
605 635 6.882678 AGGTACCTTTGTAATATGTTGTGGTC 59.117 38.462 9.21 0.00 0.00 4.02
606 636 6.786122 AGGTACCTTTGTAATATGTTGTGGT 58.214 36.000 9.21 0.00 0.00 4.16
607 637 7.148137 GGAAGGTACCTTTGTAATATGTTGTGG 60.148 40.741 27.72 0.00 36.26 4.17
608 638 7.610305 AGGAAGGTACCTTTGTAATATGTTGTG 59.390 37.037 27.72 0.00 36.86 3.33
609 639 7.696017 AGGAAGGTACCTTTGTAATATGTTGT 58.304 34.615 27.72 0.11 36.86 3.32
610 640 9.106070 GTAGGAAGGTACCTTTGTAATATGTTG 57.894 37.037 27.72 0.00 41.00 3.33
611 641 9.054580 AGTAGGAAGGTACCTTTGTAATATGTT 57.945 33.333 27.72 0.83 41.00 2.71
612 642 8.619683 AGTAGGAAGGTACCTTTGTAATATGT 57.380 34.615 27.72 1.42 41.00 2.29
613 643 8.925338 AGAGTAGGAAGGTACCTTTGTAATATG 58.075 37.037 27.72 0.00 41.00 1.78
616 646 9.503369 AATAGAGTAGGAAGGTACCTTTGTAAT 57.497 33.333 27.72 19.78 41.00 1.89
617 647 8.906238 AATAGAGTAGGAAGGTACCTTTGTAA 57.094 34.615 27.72 11.54 41.00 2.41
618 648 8.906238 AAATAGAGTAGGAAGGTACCTTTGTA 57.094 34.615 27.72 18.40 41.00 2.41
619 649 7.809880 AAATAGAGTAGGAAGGTACCTTTGT 57.190 36.000 27.72 19.37 41.00 2.83
620 650 9.198475 TCTAAATAGAGTAGGAAGGTACCTTTG 57.802 37.037 27.72 2.79 41.00 2.77
621 651 9.954992 ATCTAAATAGAGTAGGAAGGTACCTTT 57.045 33.333 27.72 15.71 37.33 3.11
622 652 9.590828 GATCTAAATAGAGTAGGAAGGTACCTT 57.409 37.037 27.43 27.43 37.33 3.50
623 653 7.884354 CGATCTAAATAGAGTAGGAAGGTACCT 59.116 40.741 9.21 9.21 38.62 3.08
624 654 7.882271 TCGATCTAAATAGAGTAGGAAGGTACC 59.118 40.741 2.73 2.73 35.50 3.34
625 655 8.845413 TCGATCTAAATAGAGTAGGAAGGTAC 57.155 38.462 0.00 0.00 35.50 3.34
626 656 9.857656 TTTCGATCTAAATAGAGTAGGAAGGTA 57.142 33.333 0.00 0.00 35.50 3.08
627 657 8.763984 TTTCGATCTAAATAGAGTAGGAAGGT 57.236 34.615 0.00 0.00 35.50 3.50
628 658 9.069082 TCTTTCGATCTAAATAGAGTAGGAAGG 57.931 37.037 0.00 0.00 35.50 3.46
630 660 9.848710 TCTCTTTCGATCTAAATAGAGTAGGAA 57.151 33.333 4.32 0.00 35.50 3.36
631 661 9.848710 TTCTCTTTCGATCTAAATAGAGTAGGA 57.151 33.333 7.54 0.00 35.50 2.94
635 665 9.810545 CCTTTTCTCTTTCGATCTAAATAGAGT 57.189 33.333 7.54 0.00 35.50 3.24
668 698 9.593134 TGTTGCTGTACAAAAATAATTGAGTTT 57.407 25.926 0.00 0.00 40.82 2.66
669 699 9.593134 TTGTTGCTGTACAAAAATAATTGAGTT 57.407 25.926 0.00 0.00 40.82 3.01
670 700 9.030301 GTTGTTGCTGTACAAAAATAATTGAGT 57.970 29.630 0.00 0.00 37.79 3.41
671 701 9.029243 TGTTGTTGCTGTACAAAAATAATTGAG 57.971 29.630 0.00 0.00 37.79 3.02
672 702 8.932945 TGTTGTTGCTGTACAAAAATAATTGA 57.067 26.923 0.00 0.00 37.79 2.57
673 703 9.419737 GTTGTTGTTGCTGTACAAAAATAATTG 57.580 29.630 0.00 0.00 38.42 2.32
674 704 9.155975 TGTTGTTGTTGCTGTACAAAAATAATT 57.844 25.926 0.00 0.00 38.42 1.40
675 705 8.709386 TGTTGTTGTTGCTGTACAAAAATAAT 57.291 26.923 0.00 0.00 38.42 1.28
676 706 8.436200 GTTGTTGTTGTTGCTGTACAAAAATAA 58.564 29.630 0.00 6.78 37.79 1.40
677 707 7.598869 TGTTGTTGTTGTTGCTGTACAAAAATA 59.401 29.630 0.00 2.22 37.79 1.40
678 708 6.425114 TGTTGTTGTTGTTGCTGTACAAAAAT 59.575 30.769 0.00 0.00 37.79 1.82
679 709 5.753438 TGTTGTTGTTGTTGCTGTACAAAAA 59.247 32.000 0.00 0.00 40.82 1.94
680 710 5.289595 TGTTGTTGTTGTTGCTGTACAAAA 58.710 33.333 0.00 0.00 40.82 2.44
681 711 4.871513 TGTTGTTGTTGTTGCTGTACAAA 58.128 34.783 0.00 0.00 40.82 2.83
682 712 4.505313 TGTTGTTGTTGTTGCTGTACAA 57.495 36.364 0.00 0.00 35.75 2.41
683 713 4.216472 TCTTGTTGTTGTTGTTGCTGTACA 59.784 37.500 0.00 0.00 0.00 2.90
684 714 4.728534 TCTTGTTGTTGTTGTTGCTGTAC 58.271 39.130 0.00 0.00 0.00 2.90
685 715 5.048364 AGTTCTTGTTGTTGTTGTTGCTGTA 60.048 36.000 0.00 0.00 0.00 2.74
686 716 3.932545 TCTTGTTGTTGTTGTTGCTGT 57.067 38.095 0.00 0.00 0.00 4.40
687 717 4.236935 AGTTCTTGTTGTTGTTGTTGCTG 58.763 39.130 0.00 0.00 0.00 4.41
688 718 4.485163 GAGTTCTTGTTGTTGTTGTTGCT 58.515 39.130 0.00 0.00 0.00 3.91
689 719 3.300590 CGAGTTCTTGTTGTTGTTGTTGC 59.699 43.478 0.00 0.00 0.00 4.17
690 720 4.472286 ACGAGTTCTTGTTGTTGTTGTTG 58.528 39.130 0.00 0.00 0.00 3.33
691 721 4.454504 AGACGAGTTCTTGTTGTTGTTGTT 59.545 37.500 0.00 0.00 0.00 2.83
692 722 4.000988 AGACGAGTTCTTGTTGTTGTTGT 58.999 39.130 0.00 0.00 0.00 3.32
693 723 4.600012 AGACGAGTTCTTGTTGTTGTTG 57.400 40.909 0.00 0.00 0.00 3.33
694 724 5.622770 AAAGACGAGTTCTTGTTGTTGTT 57.377 34.783 0.00 0.00 44.41 2.83
695 725 6.103222 GTAAAGACGAGTTCTTGTTGTTGT 57.897 37.500 0.00 0.00 44.41 3.32
711 741 5.069501 ACAATCCTACACTCCGTAAAGAC 57.930 43.478 0.00 0.00 0.00 3.01
712 742 5.733620 AACAATCCTACACTCCGTAAAGA 57.266 39.130 0.00 0.00 0.00 2.52
713 743 8.488651 AATAAACAATCCTACACTCCGTAAAG 57.511 34.615 0.00 0.00 0.00 1.85
714 744 8.851541 AAATAAACAATCCTACACTCCGTAAA 57.148 30.769 0.00 0.00 0.00 2.01
715 745 8.851541 AAAATAAACAATCCTACACTCCGTAA 57.148 30.769 0.00 0.00 0.00 3.18
716 746 7.550196 GGAAAATAAACAATCCTACACTCCGTA 59.450 37.037 0.00 0.00 0.00 4.02
717 747 6.373495 GGAAAATAAACAATCCTACACTCCGT 59.627 38.462 0.00 0.00 0.00 4.69
718 748 6.598064 AGGAAAATAAACAATCCTACACTCCG 59.402 38.462 0.00 0.00 40.47 4.63
719 749 7.939784 AGGAAAATAAACAATCCTACACTCC 57.060 36.000 0.00 0.00 40.47 3.85
737 767 9.695155 CCCTCCTATTCTATTGTAAAAGGAAAA 57.305 33.333 0.00 0.00 31.57 2.29
738 768 9.064602 TCCCTCCTATTCTATTGTAAAAGGAAA 57.935 33.333 0.00 0.00 31.57 3.13
739 769 8.632731 TCCCTCCTATTCTATTGTAAAAGGAA 57.367 34.615 0.00 0.00 31.57 3.36
740 770 8.632731 TTCCCTCCTATTCTATTGTAAAAGGA 57.367 34.615 0.00 0.00 0.00 3.36
741 771 9.868160 ATTTCCCTCCTATTCTATTGTAAAAGG 57.132 33.333 0.00 0.00 0.00 3.11
747 777 8.560903 ACTTGAATTTCCCTCCTATTCTATTGT 58.439 33.333 0.00 0.00 31.25 2.71
748 778 8.844244 CACTTGAATTTCCCTCCTATTCTATTG 58.156 37.037 0.00 0.00 31.25 1.90
749 779 7.503902 GCACTTGAATTTCCCTCCTATTCTATT 59.496 37.037 0.00 0.00 31.25 1.73
750 780 7.001073 GCACTTGAATTTCCCTCCTATTCTAT 58.999 38.462 0.00 0.00 31.25 1.98
751 781 6.069673 TGCACTTGAATTTCCCTCCTATTCTA 60.070 38.462 0.00 0.00 31.25 2.10
752 782 5.196695 GCACTTGAATTTCCCTCCTATTCT 58.803 41.667 0.00 0.00 31.25 2.40
753 783 4.949856 TGCACTTGAATTTCCCTCCTATTC 59.050 41.667 0.00 0.00 0.00 1.75
754 784 4.934356 TGCACTTGAATTTCCCTCCTATT 58.066 39.130 0.00 0.00 0.00 1.73
755 785 4.591321 TGCACTTGAATTTCCCTCCTAT 57.409 40.909 0.00 0.00 0.00 2.57
756 786 4.079253 GTTGCACTTGAATTTCCCTCCTA 58.921 43.478 0.00 0.00 0.00 2.94
757 787 2.893489 GTTGCACTTGAATTTCCCTCCT 59.107 45.455 0.00 0.00 0.00 3.69
758 788 2.351738 CGTTGCACTTGAATTTCCCTCC 60.352 50.000 0.00 0.00 0.00 4.30
759 789 2.293399 ACGTTGCACTTGAATTTCCCTC 59.707 45.455 0.00 0.00 0.00 4.30
760 790 2.306847 ACGTTGCACTTGAATTTCCCT 58.693 42.857 0.00 0.00 0.00 4.20
761 791 2.793278 ACGTTGCACTTGAATTTCCC 57.207 45.000 0.00 0.00 0.00 3.97
762 792 4.616802 CACATACGTTGCACTTGAATTTCC 59.383 41.667 0.00 0.00 0.00 3.13
763 793 4.088496 GCACATACGTTGCACTTGAATTTC 59.912 41.667 5.84 0.00 0.00 2.17
764 794 3.980775 GCACATACGTTGCACTTGAATTT 59.019 39.130 5.84 0.00 0.00 1.82
765 795 3.253188 AGCACATACGTTGCACTTGAATT 59.747 39.130 12.86 0.00 0.00 2.17
766 796 2.813754 AGCACATACGTTGCACTTGAAT 59.186 40.909 12.86 0.00 0.00 2.57
767 797 2.032117 CAGCACATACGTTGCACTTGAA 60.032 45.455 12.86 0.00 0.00 2.69
768 798 1.530720 CAGCACATACGTTGCACTTGA 59.469 47.619 12.86 0.00 0.00 3.02
769 799 1.264020 ACAGCACATACGTTGCACTTG 59.736 47.619 12.86 5.40 0.00 3.16
770 800 1.593196 ACAGCACATACGTTGCACTT 58.407 45.000 12.86 0.00 0.00 3.16
771 801 2.448926 TACAGCACATACGTTGCACT 57.551 45.000 12.86 0.32 0.00 4.40
772 802 3.223157 GTTTACAGCACATACGTTGCAC 58.777 45.455 12.86 0.00 0.00 4.57
773 803 2.872858 TGTTTACAGCACATACGTTGCA 59.127 40.909 12.86 0.00 0.00 4.08
774 804 3.529634 TGTTTACAGCACATACGTTGC 57.470 42.857 2.43 2.43 0.00 4.17
775 805 4.903585 CACTTGTTTACAGCACATACGTTG 59.096 41.667 0.00 0.00 0.00 4.10
776 806 4.553938 GCACTTGTTTACAGCACATACGTT 60.554 41.667 0.00 0.00 0.00 3.99
777 807 3.059188 GCACTTGTTTACAGCACATACGT 60.059 43.478 0.00 0.00 0.00 3.57
778 808 3.059257 TGCACTTGTTTACAGCACATACG 60.059 43.478 0.00 0.00 0.00 3.06
779 809 4.481930 TGCACTTGTTTACAGCACATAC 57.518 40.909 0.00 0.00 0.00 2.39
780 810 4.336713 TGTTGCACTTGTTTACAGCACATA 59.663 37.500 0.00 0.00 34.56 2.29
781 811 3.130164 TGTTGCACTTGTTTACAGCACAT 59.870 39.130 0.00 0.00 34.56 3.21
782 812 2.489722 TGTTGCACTTGTTTACAGCACA 59.510 40.909 0.00 0.00 34.56 4.57
783 813 2.851824 GTGTTGCACTTGTTTACAGCAC 59.148 45.455 0.00 0.00 37.15 4.40
784 814 2.489722 TGTGTTGCACTTGTTTACAGCA 59.510 40.909 0.00 0.00 35.11 4.41
785 815 3.143807 TGTGTTGCACTTGTTTACAGC 57.856 42.857 0.00 0.00 35.11 4.40
786 816 5.815850 TGTATGTGTTGCACTTGTTTACAG 58.184 37.500 0.00 0.00 35.11 2.74
787 817 5.819825 TGTATGTGTTGCACTTGTTTACA 57.180 34.783 0.00 0.00 35.11 2.41
788 818 8.964420 AATATGTATGTGTTGCACTTGTTTAC 57.036 30.769 0.00 0.00 35.11 2.01
790 820 9.405587 GTAAATATGTATGTGTTGCACTTGTTT 57.594 29.630 0.00 0.00 35.11 2.83
791 821 7.748683 CGTAAATATGTATGTGTTGCACTTGTT 59.251 33.333 0.00 0.00 35.11 2.83
792 822 7.094975 ACGTAAATATGTATGTGTTGCACTTGT 60.095 33.333 0.00 0.00 35.11 3.16
793 823 7.240674 ACGTAAATATGTATGTGTTGCACTTG 58.759 34.615 0.00 0.00 35.11 3.16
794 824 7.372451 ACGTAAATATGTATGTGTTGCACTT 57.628 32.000 0.00 0.00 35.11 3.16
795 825 6.978343 ACGTAAATATGTATGTGTTGCACT 57.022 33.333 0.00 0.00 35.11 4.40
796 826 8.693948 CATACGTAAATATGTATGTGTTGCAC 57.306 34.615 18.42 0.00 44.92 4.57
805 835 6.590292 GGAGCAGCACATACGTAAATATGTAT 59.410 38.462 0.00 0.46 42.63 2.29
806 836 5.924254 GGAGCAGCACATACGTAAATATGTA 59.076 40.000 0.00 0.00 42.63 2.29
807 837 4.750098 GGAGCAGCACATACGTAAATATGT 59.250 41.667 0.00 0.00 44.84 2.29
808 838 4.749598 TGGAGCAGCACATACGTAAATATG 59.250 41.667 0.00 0.00 38.34 1.78
809 839 4.956085 TGGAGCAGCACATACGTAAATAT 58.044 39.130 0.00 0.00 0.00 1.28
810 840 4.368315 CTGGAGCAGCACATACGTAAATA 58.632 43.478 0.00 0.00 0.00 1.40
811 841 3.198068 CTGGAGCAGCACATACGTAAAT 58.802 45.455 0.00 0.00 0.00 1.40
812 842 2.616960 CTGGAGCAGCACATACGTAAA 58.383 47.619 0.00 0.00 0.00 2.01
813 843 2.293677 CTGGAGCAGCACATACGTAA 57.706 50.000 0.00 0.00 0.00 3.18
815 845 4.919653 CTGGAGCAGCACATACGT 57.080 55.556 0.00 0.00 0.00 3.57
835 865 2.274948 TAATGAGCTGGGCTGGGCTG 62.275 60.000 0.00 0.00 39.88 4.85
836 866 1.358830 ATAATGAGCTGGGCTGGGCT 61.359 55.000 0.00 0.00 39.88 5.19
837 867 0.892814 GATAATGAGCTGGGCTGGGC 60.893 60.000 0.00 0.00 39.88 5.36
838 868 0.475475 TGATAATGAGCTGGGCTGGG 59.525 55.000 0.00 0.00 39.88 4.45
839 869 1.419012 TCTGATAATGAGCTGGGCTGG 59.581 52.381 0.00 0.00 39.88 4.85
840 870 2.924757 TCTGATAATGAGCTGGGCTG 57.075 50.000 0.00 0.00 39.88 4.85
841 871 2.977580 TGATCTGATAATGAGCTGGGCT 59.022 45.455 0.00 0.00 43.88 5.19
842 872 3.007723 TCTGATCTGATAATGAGCTGGGC 59.992 47.826 0.00 0.00 0.00 5.36
843 873 4.886496 TCTGATCTGATAATGAGCTGGG 57.114 45.455 0.00 0.00 0.00 4.45
844 874 5.639931 CACATCTGATCTGATAATGAGCTGG 59.360 44.000 14.05 2.78 0.00 4.85
845 875 6.456501 TCACATCTGATCTGATAATGAGCTG 58.543 40.000 14.05 4.74 0.00 4.24
846 876 6.494146 TCTCACATCTGATCTGATAATGAGCT 59.506 38.462 29.12 0.00 38.00 4.09
847 877 6.689554 TCTCACATCTGATCTGATAATGAGC 58.310 40.000 29.12 0.00 38.00 4.26
848 878 7.888424 ACTCTCACATCTGATCTGATAATGAG 58.112 38.462 28.63 28.63 38.67 2.90
849 879 7.308469 CGACTCTCACATCTGATCTGATAATGA 60.308 40.741 14.05 17.25 0.00 2.57
850 880 6.802834 CGACTCTCACATCTGATCTGATAATG 59.197 42.308 14.05 14.54 0.00 1.90
851 881 6.714356 TCGACTCTCACATCTGATCTGATAAT 59.286 38.462 14.05 4.15 0.00 1.28
852 882 6.058183 TCGACTCTCACATCTGATCTGATAA 58.942 40.000 14.05 3.74 0.00 1.75
853 883 5.615289 TCGACTCTCACATCTGATCTGATA 58.385 41.667 14.05 0.00 0.00 2.15
854 884 4.459330 TCGACTCTCACATCTGATCTGAT 58.541 43.478 9.15 9.15 0.00 2.90
855 885 3.876320 CTCGACTCTCACATCTGATCTGA 59.124 47.826 4.63 4.63 0.00 3.27
856 886 3.876320 TCTCGACTCTCACATCTGATCTG 59.124 47.826 0.00 0.00 0.00 2.90
857 887 4.129380 CTCTCGACTCTCACATCTGATCT 58.871 47.826 0.00 0.00 0.00 2.75
858 888 4.024893 GTCTCTCGACTCTCACATCTGATC 60.025 50.000 0.00 0.00 37.19 2.92
859 889 3.876914 GTCTCTCGACTCTCACATCTGAT 59.123 47.826 0.00 0.00 37.19 2.90
860 890 3.266636 GTCTCTCGACTCTCACATCTGA 58.733 50.000 0.00 0.00 37.19 3.27
861 891 3.006247 TGTCTCTCGACTCTCACATCTG 58.994 50.000 0.00 0.00 40.86 2.90
862 892 3.006940 GTGTCTCTCGACTCTCACATCT 58.993 50.000 0.00 0.00 40.86 2.90
863 893 3.006940 AGTGTCTCTCGACTCTCACATC 58.993 50.000 8.16 0.00 39.14 3.06
864 894 2.746904 CAGTGTCTCTCGACTCTCACAT 59.253 50.000 8.16 0.00 40.84 3.21
865 895 2.147150 CAGTGTCTCTCGACTCTCACA 58.853 52.381 8.16 0.00 40.84 3.58
866 896 2.147958 ACAGTGTCTCTCGACTCTCAC 58.852 52.381 0.00 0.00 40.84 3.51
867 897 2.037902 AGACAGTGTCTCTCGACTCTCA 59.962 50.000 20.34 0.00 38.71 3.27
868 898 2.415168 CAGACAGTGTCTCTCGACTCTC 59.585 54.545 23.08 0.00 41.37 3.20
869 899 2.037902 TCAGACAGTGTCTCTCGACTCT 59.962 50.000 23.08 0.00 41.37 3.24
870 900 2.158841 GTCAGACAGTGTCTCTCGACTC 59.841 54.545 23.08 3.77 41.37 3.36
871 901 2.147958 GTCAGACAGTGTCTCTCGACT 58.852 52.381 23.08 0.00 41.37 4.18
872 902 1.136197 CGTCAGACAGTGTCTCTCGAC 60.136 57.143 28.03 25.58 41.37 4.20
873 903 1.149148 CGTCAGACAGTGTCTCTCGA 58.851 55.000 28.03 19.23 41.37 4.04
874 904 1.127766 CTCGTCAGACAGTGTCTCTCG 59.872 57.143 26.97 26.97 41.37 4.04
875 905 2.095969 CACTCGTCAGACAGTGTCTCTC 60.096 54.545 23.08 16.46 41.37 3.20
876 906 1.876799 CACTCGTCAGACAGTGTCTCT 59.123 52.381 23.08 0.39 41.37 3.10
877 907 1.068885 CCACTCGTCAGACAGTGTCTC 60.069 57.143 23.08 11.98 41.37 3.36
878 908 0.955178 CCACTCGTCAGACAGTGTCT 59.045 55.000 20.34 20.34 44.44 3.41
879 909 0.039074 CCCACTCGTCAGACAGTGTC 60.039 60.000 15.78 15.78 38.74 3.67
880 910 1.464376 CCCCACTCGTCAGACAGTGT 61.464 60.000 21.72 0.00 38.74 3.55
881 911 1.290324 CCCCACTCGTCAGACAGTG 59.710 63.158 18.86 18.86 39.90 3.66
882 912 2.574955 GCCCCACTCGTCAGACAGT 61.575 63.158 0.41 0.83 0.00 3.55
883 913 2.262915 GCCCCACTCGTCAGACAG 59.737 66.667 0.41 0.19 0.00 3.51
884 914 3.311110 GGCCCCACTCGTCAGACA 61.311 66.667 0.41 0.00 0.00 3.41
885 915 3.311110 TGGCCCCACTCGTCAGAC 61.311 66.667 0.00 0.00 0.00 3.51
886 916 3.311110 GTGGCCCCACTCGTCAGA 61.311 66.667 10.15 0.00 43.12 3.27
894 924 2.674380 CTGAGCAAGTGGCCCCAC 60.674 66.667 9.42 9.42 46.50 4.61
895 925 4.666253 GCTGAGCAAGTGGCCCCA 62.666 66.667 0.00 0.00 46.50 4.96
896 926 3.875510 AAGCTGAGCAAGTGGCCCC 62.876 63.158 7.39 0.00 46.50 5.80
897 927 2.282745 AAGCTGAGCAAGTGGCCC 60.283 61.111 7.39 0.00 46.50 5.80
898 928 1.584380 CTGAAGCTGAGCAAGTGGCC 61.584 60.000 7.39 0.00 46.50 5.36
899 929 1.874562 CTGAAGCTGAGCAAGTGGC 59.125 57.895 7.39 0.00 45.30 5.01
900 930 0.887836 TGCTGAAGCTGAGCAAGTGG 60.888 55.000 16.41 0.00 43.47 4.00
901 931 2.625375 TGCTGAAGCTGAGCAAGTG 58.375 52.632 16.41 0.00 43.47 3.16
905 935 0.604780 GACCTTGCTGAAGCTGAGCA 60.605 55.000 15.10 15.10 44.75 4.26
906 936 1.304509 GGACCTTGCTGAAGCTGAGC 61.305 60.000 10.46 10.46 42.66 4.26
907 937 1.018226 CGGACCTTGCTGAAGCTGAG 61.018 60.000 3.61 2.05 42.66 3.35
908 938 1.004560 CGGACCTTGCTGAAGCTGA 60.005 57.895 3.61 0.00 42.66 4.26
909 939 1.004560 TCGGACCTTGCTGAAGCTG 60.005 57.895 3.61 0.00 42.66 4.24
910 940 1.294780 CTCGGACCTTGCTGAAGCT 59.705 57.895 3.61 0.00 42.66 3.74
911 941 2.394563 GCTCGGACCTTGCTGAAGC 61.395 63.158 0.00 0.00 42.50 3.86
912 942 1.004560 TGCTCGGACCTTGCTGAAG 60.005 57.895 7.04 0.00 0.00 3.02
913 943 1.004560 CTGCTCGGACCTTGCTGAA 60.005 57.895 7.04 0.00 0.00 3.02
914 944 1.260538 ATCTGCTCGGACCTTGCTGA 61.261 55.000 14.15 14.15 38.59 4.26
915 945 0.809241 GATCTGCTCGGACCTTGCTG 60.809 60.000 7.04 6.63 0.00 4.41
916 946 1.260538 TGATCTGCTCGGACCTTGCT 61.261 55.000 7.04 0.00 0.00 3.91
917 947 1.086634 GTGATCTGCTCGGACCTTGC 61.087 60.000 0.00 0.00 0.00 4.01
918 948 0.247460 TGTGATCTGCTCGGACCTTG 59.753 55.000 0.00 0.00 0.00 3.61
919 949 0.247736 GTGTGATCTGCTCGGACCTT 59.752 55.000 0.00 0.00 0.00 3.50
920 950 1.608717 GGTGTGATCTGCTCGGACCT 61.609 60.000 0.00 0.00 0.00 3.85
921 951 1.153549 GGTGTGATCTGCTCGGACC 60.154 63.158 0.00 0.00 0.00 4.46
922 952 0.737715 GTGGTGTGATCTGCTCGGAC 60.738 60.000 0.00 0.00 0.00 4.79
923 953 1.591703 GTGGTGTGATCTGCTCGGA 59.408 57.895 0.00 0.00 0.00 4.55
924 954 1.807165 CGTGGTGTGATCTGCTCGG 60.807 63.158 0.00 0.00 0.00 4.63
925 955 2.447887 GCGTGGTGTGATCTGCTCG 61.448 63.158 0.00 0.00 0.00 5.03
926 956 0.950555 TTGCGTGGTGTGATCTGCTC 60.951 55.000 0.00 0.00 0.00 4.26
927 957 0.534877 TTTGCGTGGTGTGATCTGCT 60.535 50.000 0.00 0.00 0.00 4.24
928 958 0.523072 ATTTGCGTGGTGTGATCTGC 59.477 50.000 0.00 0.00 0.00 4.26
929 959 2.079158 AGATTTGCGTGGTGTGATCTG 58.921 47.619 0.00 0.00 0.00 2.90
930 960 2.027745 AGAGATTTGCGTGGTGTGATCT 60.028 45.455 0.00 0.00 0.00 2.75
931 961 2.349886 GAGAGATTTGCGTGGTGTGATC 59.650 50.000 0.00 0.00 0.00 2.92
932 962 2.027745 AGAGAGATTTGCGTGGTGTGAT 60.028 45.455 0.00 0.00 0.00 3.06
933 963 1.344438 AGAGAGATTTGCGTGGTGTGA 59.656 47.619 0.00 0.00 0.00 3.58
934 964 1.728971 GAGAGAGATTTGCGTGGTGTG 59.271 52.381 0.00 0.00 0.00 3.82
935 965 1.670087 CGAGAGAGATTTGCGTGGTGT 60.670 52.381 0.00 0.00 0.00 4.16
936 966 0.994995 CGAGAGAGATTTGCGTGGTG 59.005 55.000 0.00 0.00 0.00 4.17
937 967 0.737715 GCGAGAGAGATTTGCGTGGT 60.738 55.000 0.00 0.00 0.00 4.16
938 968 0.737367 TGCGAGAGAGATTTGCGTGG 60.737 55.000 0.00 0.00 0.00 4.94
939 969 0.368227 GTGCGAGAGAGATTTGCGTG 59.632 55.000 0.00 0.00 0.00 5.34
940 970 0.737715 GGTGCGAGAGAGATTTGCGT 60.738 55.000 0.00 0.00 0.00 5.24
941 971 0.737367 TGGTGCGAGAGAGATTTGCG 60.737 55.000 0.00 0.00 0.00 4.85
942 972 0.723981 GTGGTGCGAGAGAGATTTGC 59.276 55.000 0.00 0.00 0.00 3.68
943 973 1.363744 GGTGGTGCGAGAGAGATTTG 58.636 55.000 0.00 0.00 0.00 2.32
944 974 0.108615 CGGTGGTGCGAGAGAGATTT 60.109 55.000 0.00 0.00 0.00 2.17
945 975 1.513158 CGGTGGTGCGAGAGAGATT 59.487 57.895 0.00 0.00 0.00 2.40
946 976 3.069980 GCGGTGGTGCGAGAGAGAT 62.070 63.158 0.00 0.00 0.00 2.75
947 977 3.749064 GCGGTGGTGCGAGAGAGA 61.749 66.667 0.00 0.00 0.00 3.10
948 978 4.803426 GGCGGTGGTGCGAGAGAG 62.803 72.222 0.00 0.00 35.06 3.20
980 1010 4.697756 TGTACTGCTGTGGGCGCC 62.698 66.667 21.18 21.18 45.43 6.53
981 1011 3.423154 GTGTACTGCTGTGGGCGC 61.423 66.667 6.48 0.00 45.43 6.53
986 1016 3.238232 AGCATGGTGTACTGCTGTG 57.762 52.632 6.54 0.00 46.55 3.66
1051 1081 0.762461 GGGAGGGAGATGGTGGAGAG 60.762 65.000 0.00 0.00 0.00 3.20
1052 1082 1.231751 AGGGAGGGAGATGGTGGAGA 61.232 60.000 0.00 0.00 0.00 3.71
1057 1090 1.231641 CGAGAGGGAGGGAGATGGT 59.768 63.158 0.00 0.00 0.00 3.55
1440 1491 3.310193 GGACAGGAAGTAGGATAGCCTT 58.690 50.000 4.04 0.00 43.90 4.35
1495 1546 2.095461 GAGATTGGGGCTTTTCTGGAC 58.905 52.381 0.00 0.00 0.00 4.02
1503 1560 0.695803 ATCCGAGGAGATTGGGGCTT 60.696 55.000 0.00 0.00 32.49 4.35
1540 1597 3.423154 GGCGACGTTGGGCTTGAG 61.423 66.667 4.64 0.00 0.00 3.02
1583 1640 1.818060 ACAGCTTGGCAATATCGCAAA 59.182 42.857 11.15 0.00 0.00 3.68
1687 1747 0.247460 CTGAACATCCGAGAGCCACA 59.753 55.000 0.00 0.00 0.00 4.17
1747 1807 0.535102 AGTTCCACTTTGGCGGTGAG 60.535 55.000 6.63 0.00 37.47 3.51
1764 1836 4.747108 CACATGAACGTCTTCTTCAAGAGT 59.253 41.667 0.00 0.00 39.45 3.24
1784 1856 1.888436 GACCTCGGCATCTGACCACA 61.888 60.000 0.00 0.00 0.00 4.17
1805 1877 4.464008 TGGAGCCTTAGAAATAGCAATGG 58.536 43.478 0.00 0.00 0.00 3.16
2250 2322 5.135383 TCCAGGGATCAAATTATCAGCTTG 58.865 41.667 0.00 0.00 0.00 4.01
2551 3011 1.292085 TACCTAGTTTGGGAAGGGCC 58.708 55.000 0.00 0.00 34.52 5.80
2591 3052 4.645809 GGACAGCATTCCCTCCAC 57.354 61.111 0.00 0.00 0.00 4.02
2693 3163 7.176865 TGAGGAATATACGACTAATCCAAGAGG 59.823 40.741 0.00 0.00 0.00 3.69
2694 3164 8.112016 TGAGGAATATACGACTAATCCAAGAG 57.888 38.462 0.00 0.00 0.00 2.85
2695 3165 8.473358 TTGAGGAATATACGACTAATCCAAGA 57.527 34.615 0.00 0.00 0.00 3.02
2696 3166 9.712305 ATTTGAGGAATATACGACTAATCCAAG 57.288 33.333 0.00 0.00 0.00 3.61
2840 3368 6.149973 CACAGCTTCTGATGACTCCATAAAAA 59.850 38.462 0.29 0.00 35.18 1.94
2936 3464 5.152934 TGGGTAACTGAGGAAGTACTTCTT 58.847 41.667 29.66 24.89 38.56 2.52
3032 3560 6.199908 CAGGACTATATATGCGCATTCTTAGC 59.800 42.308 30.42 18.63 0.00 3.09
3041 3569 4.988540 TGTCAAACAGGACTATATATGCGC 59.011 41.667 0.00 0.00 38.61 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.