Multiple sequence alignment - TraesCS6D01G021600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G021600 chr6D 100.000 3155 0 0 1 3155 8553794 8550640 0.000000e+00 5827.0
1 TraesCS6D01G021600 chr6D 89.730 1558 125 12 624 2166 8967212 8968749 0.000000e+00 1958.0
2 TraesCS6D01G021600 chr6D 81.802 1709 263 22 988 2689 33895041 33896708 0.000000e+00 1389.0
3 TraesCS6D01G021600 chr6D 81.818 1628 260 28 972 2575 8987201 8988816 0.000000e+00 1334.0
4 TraesCS6D01G021600 chr6D 78.141 398 43 20 2760 3148 8917071 8917433 2.470000e-51 213.0
5 TraesCS6D01G021600 chr6D 92.857 126 9 0 495 620 8923869 8923994 1.930000e-42 183.0
6 TraesCS6D01G021600 chr6D 89.051 137 15 0 358 494 34087772 34087908 1.500000e-38 171.0
7 TraesCS6D01G021600 chr6B 92.441 2196 142 12 972 3155 16433113 16435296 0.000000e+00 3114.0
8 TraesCS6D01G021600 chr6B 86.437 1482 187 7 994 2472 15234857 15233387 0.000000e+00 1611.0
9 TraesCS6D01G021600 chr6B 88.326 1302 145 7 977 2275 52981067 52979770 0.000000e+00 1555.0
10 TraesCS6D01G021600 chr6B 83.246 1713 240 25 990 2690 15397956 15396279 0.000000e+00 1530.0
11 TraesCS6D01G021600 chr6B 85.389 1492 179 17 984 2472 16267377 16268832 0.000000e+00 1511.0
12 TraesCS6D01G021600 chr6B 82.484 1707 236 27 994 2690 670592701 670591048 0.000000e+00 1437.0
13 TraesCS6D01G021600 chr6B 81.572 1590 275 14 1115 2697 15715098 15713520 0.000000e+00 1297.0
14 TraesCS6D01G021600 chr6B 86.517 1157 151 5 1023 2177 90939366 90940519 0.000000e+00 1267.0
15 TraesCS6D01G021600 chr6B 84.540 1119 168 3 1048 2162 53062460 53061343 0.000000e+00 1103.0
16 TraesCS6D01G021600 chr6B 83.028 601 74 15 868 1455 16338695 16339280 1.300000e-143 520.0
17 TraesCS6D01G021600 chr6B 86.902 397 31 10 2760 3155 90941224 90941600 2.910000e-115 425.0
18 TraesCS6D01G021600 chr6B 86.290 372 31 9 2768 3139 15215136 15214785 1.370000e-103 387.0
19 TraesCS6D01G021600 chr6B 88.263 213 21 1 201 413 16445664 16445872 5.220000e-63 252.0
20 TraesCS6D01G021600 chr6B 91.270 126 11 0 495 620 15376424 15376299 4.180000e-39 172.0
21 TraesCS6D01G021600 chr2B 90.141 1704 128 12 495 2166 709426697 709425002 0.000000e+00 2180.0
22 TraesCS6D01G021600 chr2B 81.435 474 61 21 806 1260 709515049 709514584 2.310000e-96 363.0
23 TraesCS6D01G021600 chr2B 94.521 73 2 2 2693 2763 373997396 373997324 9.250000e-21 111.0
24 TraesCS6D01G021600 chr6A 94.346 1238 61 7 1547 2781 9474627 9475858 0.000000e+00 1890.0
25 TraesCS6D01G021600 chr6A 84.385 1601 225 17 988 2575 9461445 9463033 0.000000e+00 1548.0
26 TraesCS6D01G021600 chr6A 83.797 1580 207 29 1125 2690 9355311 9356855 0.000000e+00 1454.0
27 TraesCS6D01G021600 chr6A 91.667 384 25 2 494 870 9470135 9470518 2.790000e-145 525.0
28 TraesCS6D01G021600 chr6A 92.982 57 4 0 336 392 9493289 9493345 2.020000e-12 84.2
29 TraesCS6D01G021600 chr5B 82.657 1724 236 30 990 2690 556795758 556794075 0.000000e+00 1469.0
30 TraesCS6D01G021600 chr5B 84.544 1501 203 13 988 2472 556628250 556626763 0.000000e+00 1459.0
31 TraesCS6D01G021600 chr5B 90.361 83 3 3 2696 2773 597288183 597288101 1.550000e-18 104.0
32 TraesCS6D01G021600 chr5B 90.244 82 2 4 2694 2774 710681118 710681042 5.570000e-18 102.0
33 TraesCS6D01G021600 chr5D 83.455 1511 217 23 976 2472 42076041 42077532 0.000000e+00 1375.0
34 TraesCS6D01G021600 chr5D 90.244 82 8 0 2579 2660 42077633 42077714 1.200000e-19 108.0
35 TraesCS6D01G021600 chrUn 83.087 1283 192 23 1185 2457 95438041 95439308 0.000000e+00 1144.0
36 TraesCS6D01G021600 chrUn 91.514 601 35 4 2098 2697 42220943 42220358 0.000000e+00 813.0
37 TraesCS6D01G021600 chrUn 91.630 227 19 0 2760 2986 42220359 42220133 6.570000e-82 315.0
38 TraesCS6D01G021600 chrUn 91.908 173 14 0 2983 3155 42218729 42218557 3.140000e-60 243.0
39 TraesCS6D01G021600 chr5A 93.182 88 4 2 2689 2775 588555705 588555619 9.190000e-26 128.0
40 TraesCS6D01G021600 chr3B 92.683 82 5 1 2684 2765 30511859 30511939 1.990000e-22 117.0
41 TraesCS6D01G021600 chr3B 93.243 74 5 0 2696 2769 214558382 214558309 3.330000e-20 110.0
42 TraesCS6D01G021600 chr2D 97.015 67 2 0 2695 2761 260976025 260976091 2.570000e-21 113.0
43 TraesCS6D01G021600 chr4B 97.015 67 1 1 2696 2761 618073531 618073465 9.250000e-21 111.0
44 TraesCS6D01G021600 chr4D 91.139 79 4 2 2687 2764 73330318 73330394 1.550000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G021600 chr6D 8550640 8553794 3154 True 5827.0 5827 100.0000 1 3155 1 chr6D.!!$R1 3154
1 TraesCS6D01G021600 chr6D 8967212 8968749 1537 False 1958.0 1958 89.7300 624 2166 1 chr6D.!!$F3 1542
2 TraesCS6D01G021600 chr6D 33895041 33896708 1667 False 1389.0 1389 81.8020 988 2689 1 chr6D.!!$F5 1701
3 TraesCS6D01G021600 chr6D 8987201 8988816 1615 False 1334.0 1334 81.8180 972 2575 1 chr6D.!!$F4 1603
4 TraesCS6D01G021600 chr6B 16433113 16435296 2183 False 3114.0 3114 92.4410 972 3155 1 chr6B.!!$F3 2183
5 TraesCS6D01G021600 chr6B 15233387 15234857 1470 True 1611.0 1611 86.4370 994 2472 1 chr6B.!!$R2 1478
6 TraesCS6D01G021600 chr6B 52979770 52981067 1297 True 1555.0 1555 88.3260 977 2275 1 chr6B.!!$R6 1298
7 TraesCS6D01G021600 chr6B 15396279 15397956 1677 True 1530.0 1530 83.2460 990 2690 1 chr6B.!!$R4 1700
8 TraesCS6D01G021600 chr6B 16267377 16268832 1455 False 1511.0 1511 85.3890 984 2472 1 chr6B.!!$F1 1488
9 TraesCS6D01G021600 chr6B 670591048 670592701 1653 True 1437.0 1437 82.4840 994 2690 1 chr6B.!!$R8 1696
10 TraesCS6D01G021600 chr6B 15713520 15715098 1578 True 1297.0 1297 81.5720 1115 2697 1 chr6B.!!$R5 1582
11 TraesCS6D01G021600 chr6B 53061343 53062460 1117 True 1103.0 1103 84.5400 1048 2162 1 chr6B.!!$R7 1114
12 TraesCS6D01G021600 chr6B 90939366 90941600 2234 False 846.0 1267 86.7095 1023 3155 2 chr6B.!!$F5 2132
13 TraesCS6D01G021600 chr6B 16338695 16339280 585 False 520.0 520 83.0280 868 1455 1 chr6B.!!$F2 587
14 TraesCS6D01G021600 chr2B 709425002 709426697 1695 True 2180.0 2180 90.1410 495 2166 1 chr2B.!!$R2 1671
15 TraesCS6D01G021600 chr6A 9474627 9475858 1231 False 1890.0 1890 94.3460 1547 2781 1 chr6A.!!$F4 1234
16 TraesCS6D01G021600 chr6A 9461445 9463033 1588 False 1548.0 1548 84.3850 988 2575 1 chr6A.!!$F2 1587
17 TraesCS6D01G021600 chr6A 9355311 9356855 1544 False 1454.0 1454 83.7970 1125 2690 1 chr6A.!!$F1 1565
18 TraesCS6D01G021600 chr5B 556794075 556795758 1683 True 1469.0 1469 82.6570 990 2690 1 chr5B.!!$R2 1700
19 TraesCS6D01G021600 chr5B 556626763 556628250 1487 True 1459.0 1459 84.5440 988 2472 1 chr5B.!!$R1 1484
20 TraesCS6D01G021600 chr5D 42076041 42077714 1673 False 741.5 1375 86.8495 976 2660 2 chr5D.!!$F1 1684
21 TraesCS6D01G021600 chrUn 95438041 95439308 1267 False 1144.0 1144 83.0870 1185 2457 1 chrUn.!!$F1 1272
22 TraesCS6D01G021600 chrUn 42218557 42220943 2386 True 457.0 813 91.6840 2098 3155 3 chrUn.!!$R1 1057

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
440 441 0.035458 CAGGAACCTCCCAGTGTGAC 59.965 60.0 0.0 0.0 37.19 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2182 2463 1.893808 AACAGCGGACAACCAGCAG 60.894 57.895 0.0 0.0 37.85 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.811281 ATAGCGCTTTTGTTCTGGCC 59.189 50.000 18.68 0.00 0.00 5.36
21 22 1.241315 TAGCGCTTTTGTTCTGGCCC 61.241 55.000 18.68 0.00 0.00 5.80
22 23 2.855514 GCGCTTTTGTTCTGGCCCA 61.856 57.895 0.00 0.00 0.00 5.36
24 25 0.103937 CGCTTTTGTTCTGGCCCAAA 59.896 50.000 0.00 0.00 0.00 3.28
25 26 1.869342 CGCTTTTGTTCTGGCCCAAAG 60.869 52.381 0.00 0.39 32.61 2.77
26 27 1.869774 CTTTTGTTCTGGCCCAAAGC 58.130 50.000 0.00 0.00 42.60 3.51
27 28 1.413812 CTTTTGTTCTGGCCCAAAGCT 59.586 47.619 0.00 0.00 43.05 3.74
28 29 2.373335 TTTGTTCTGGCCCAAAGCTA 57.627 45.000 0.00 0.00 43.05 3.32
29 30 2.603075 TTGTTCTGGCCCAAAGCTAT 57.397 45.000 0.00 0.00 43.05 2.97
30 31 1.838112 TGTTCTGGCCCAAAGCTATG 58.162 50.000 0.00 0.00 43.05 2.23
31 32 1.106285 GTTCTGGCCCAAAGCTATGG 58.894 55.000 0.00 0.00 43.05 2.74
37 38 3.827634 CCAAAGCTATGGGTCGGC 58.172 61.111 0.00 0.00 36.79 5.54
38 39 2.180204 CCAAAGCTATGGGTCGGCG 61.180 63.158 0.00 0.00 36.79 6.46
39 40 2.180204 CAAAGCTATGGGTCGGCGG 61.180 63.158 7.21 0.00 0.00 6.13
40 41 2.666098 AAAGCTATGGGTCGGCGGT 61.666 57.895 7.21 0.00 0.00 5.68
41 42 2.869503 AAAGCTATGGGTCGGCGGTG 62.870 60.000 7.21 0.00 0.00 4.94
42 43 4.910585 GCTATGGGTCGGCGGTGG 62.911 72.222 7.21 0.00 0.00 4.61
43 44 4.235762 CTATGGGTCGGCGGTGGG 62.236 72.222 7.21 0.00 0.00 4.61
44 45 4.781616 TATGGGTCGGCGGTGGGA 62.782 66.667 7.21 0.00 0.00 4.37
46 47 2.659946 TATGGGTCGGCGGTGGGATA 62.660 60.000 7.21 0.00 0.00 2.59
47 48 4.231439 GGGTCGGCGGTGGGATAC 62.231 72.222 7.21 0.00 0.00 2.24
48 49 3.463585 GGTCGGCGGTGGGATACA 61.464 66.667 7.21 0.00 39.74 2.29
49 50 2.803817 GGTCGGCGGTGGGATACAT 61.804 63.158 7.21 0.00 39.74 2.29
50 51 1.300697 GTCGGCGGTGGGATACATC 60.301 63.158 7.21 0.00 39.74 3.06
51 52 1.758906 TCGGCGGTGGGATACATCA 60.759 57.895 7.21 0.00 39.74 3.07
52 53 1.300931 CGGCGGTGGGATACATCAG 60.301 63.158 0.00 0.00 39.74 2.90
53 54 1.598130 GGCGGTGGGATACATCAGC 60.598 63.158 0.00 0.00 39.74 4.26
54 55 1.447643 GCGGTGGGATACATCAGCT 59.552 57.895 0.00 0.00 39.74 4.24
55 56 0.882042 GCGGTGGGATACATCAGCTG 60.882 60.000 7.63 7.63 39.74 4.24
56 57 0.882042 CGGTGGGATACATCAGCTGC 60.882 60.000 9.47 0.00 39.74 5.25
57 58 0.471617 GGTGGGATACATCAGCTGCT 59.528 55.000 9.47 0.00 39.74 4.24
58 59 1.694150 GGTGGGATACATCAGCTGCTA 59.306 52.381 9.47 0.00 39.74 3.49
59 60 2.289320 GGTGGGATACATCAGCTGCTAG 60.289 54.545 9.47 3.46 39.74 3.42
60 61 2.630098 GTGGGATACATCAGCTGCTAGA 59.370 50.000 9.47 2.90 39.74 2.43
61 62 2.896044 TGGGATACATCAGCTGCTAGAG 59.104 50.000 9.47 0.00 39.74 2.43
62 63 2.896685 GGGATACATCAGCTGCTAGAGT 59.103 50.000 9.47 3.53 39.74 3.24
63 64 3.323403 GGGATACATCAGCTGCTAGAGTT 59.677 47.826 9.47 0.00 39.74 3.01
64 65 4.305769 GGATACATCAGCTGCTAGAGTTG 58.694 47.826 9.47 0.00 34.27 3.16
65 66 2.021355 ACATCAGCTGCTAGAGTTGC 57.979 50.000 9.47 0.00 33.03 4.17
66 67 1.554160 ACATCAGCTGCTAGAGTTGCT 59.446 47.619 9.47 0.00 33.03 3.91
67 68 2.203401 CATCAGCTGCTAGAGTTGCTC 58.797 52.381 9.47 0.00 33.03 4.26
68 69 1.554836 TCAGCTGCTAGAGTTGCTCT 58.445 50.000 9.47 4.02 43.83 4.09
69 70 1.898472 TCAGCTGCTAGAGTTGCTCTT 59.102 47.619 9.47 0.00 41.50 2.85
70 71 3.092301 TCAGCTGCTAGAGTTGCTCTTA 58.908 45.455 9.47 0.00 41.50 2.10
71 72 3.130164 TCAGCTGCTAGAGTTGCTCTTAG 59.870 47.826 9.47 3.05 41.50 2.18
72 73 2.159114 AGCTGCTAGAGTTGCTCTTAGC 60.159 50.000 0.00 15.43 41.50 3.09
73 74 2.820330 CTGCTAGAGTTGCTCTTAGCC 58.180 52.381 16.86 7.17 41.51 3.93
74 75 2.430332 CTGCTAGAGTTGCTCTTAGCCT 59.570 50.000 16.86 0.00 41.51 4.58
75 76 2.428890 TGCTAGAGTTGCTCTTAGCCTC 59.571 50.000 16.86 0.00 41.51 4.70
76 77 2.693074 GCTAGAGTTGCTCTTAGCCTCT 59.307 50.000 3.87 10.98 41.51 3.69
77 78 3.132111 GCTAGAGTTGCTCTTAGCCTCTT 59.868 47.826 11.32 0.49 41.51 2.85
78 79 3.885724 AGAGTTGCTCTTAGCCTCTTC 57.114 47.619 2.90 0.00 41.51 2.87
79 80 2.499693 AGAGTTGCTCTTAGCCTCTTCC 59.500 50.000 2.90 0.00 41.51 3.46
80 81 2.234908 GAGTTGCTCTTAGCCTCTTCCA 59.765 50.000 0.00 0.00 41.51 3.53
81 82 2.843113 AGTTGCTCTTAGCCTCTTCCAT 59.157 45.455 0.00 0.00 41.51 3.41
82 83 2.941720 GTTGCTCTTAGCCTCTTCCATG 59.058 50.000 0.00 0.00 41.51 3.66
83 84 1.134280 TGCTCTTAGCCTCTTCCATGC 60.134 52.381 0.00 0.00 41.51 4.06
84 85 1.813477 GCTCTTAGCCTCTTCCATGCC 60.813 57.143 0.00 0.00 34.48 4.40
85 86 0.465705 TCTTAGCCTCTTCCATGCCG 59.534 55.000 0.00 0.00 0.00 5.69
86 87 0.465705 CTTAGCCTCTTCCATGCCGA 59.534 55.000 0.00 0.00 0.00 5.54
87 88 0.178068 TTAGCCTCTTCCATGCCGAC 59.822 55.000 0.00 0.00 0.00 4.79
88 89 0.975556 TAGCCTCTTCCATGCCGACA 60.976 55.000 0.00 0.00 0.00 4.35
89 90 2.109126 GCCTCTTCCATGCCGACAC 61.109 63.158 0.00 0.00 0.00 3.67
90 91 1.599047 CCTCTTCCATGCCGACACT 59.401 57.895 0.00 0.00 0.00 3.55
91 92 0.460987 CCTCTTCCATGCCGACACTC 60.461 60.000 0.00 0.00 0.00 3.51
92 93 0.247460 CTCTTCCATGCCGACACTCA 59.753 55.000 0.00 0.00 0.00 3.41
93 94 0.037326 TCTTCCATGCCGACACTCAC 60.037 55.000 0.00 0.00 0.00 3.51
94 95 0.320683 CTTCCATGCCGACACTCACA 60.321 55.000 0.00 0.00 0.00 3.58
95 96 0.324614 TTCCATGCCGACACTCACAT 59.675 50.000 0.00 0.00 0.00 3.21
96 97 0.108186 TCCATGCCGACACTCACATC 60.108 55.000 0.00 0.00 0.00 3.06
97 98 1.091771 CCATGCCGACACTCACATCC 61.092 60.000 0.00 0.00 0.00 3.51
98 99 0.391528 CATGCCGACACTCACATCCA 60.392 55.000 0.00 0.00 0.00 3.41
99 100 0.324614 ATGCCGACACTCACATCCAA 59.675 50.000 0.00 0.00 0.00 3.53
100 101 0.107643 TGCCGACACTCACATCCAAA 59.892 50.000 0.00 0.00 0.00 3.28
101 102 1.234821 GCCGACACTCACATCCAAAA 58.765 50.000 0.00 0.00 0.00 2.44
102 103 1.812571 GCCGACACTCACATCCAAAAT 59.187 47.619 0.00 0.00 0.00 1.82
103 104 3.006940 GCCGACACTCACATCCAAAATA 58.993 45.455 0.00 0.00 0.00 1.40
104 105 3.063997 GCCGACACTCACATCCAAAATAG 59.936 47.826 0.00 0.00 0.00 1.73
105 106 4.503910 CCGACACTCACATCCAAAATAGA 58.496 43.478 0.00 0.00 0.00 1.98
106 107 4.330074 CCGACACTCACATCCAAAATAGAC 59.670 45.833 0.00 0.00 0.00 2.59
107 108 5.171476 CGACACTCACATCCAAAATAGACT 58.829 41.667 0.00 0.00 0.00 3.24
108 109 6.330278 CGACACTCACATCCAAAATAGACTA 58.670 40.000 0.00 0.00 0.00 2.59
109 110 6.811665 CGACACTCACATCCAAAATAGACTAA 59.188 38.462 0.00 0.00 0.00 2.24
110 111 7.009631 CGACACTCACATCCAAAATAGACTAAG 59.990 40.741 0.00 0.00 0.00 2.18
111 112 7.907389 ACACTCACATCCAAAATAGACTAAGA 58.093 34.615 0.00 0.00 0.00 2.10
112 113 8.037758 ACACTCACATCCAAAATAGACTAAGAG 58.962 37.037 0.00 0.00 0.00 2.85
113 114 7.493971 CACTCACATCCAAAATAGACTAAGAGG 59.506 40.741 0.00 0.00 0.00 3.69
114 115 7.181125 ACTCACATCCAAAATAGACTAAGAGGT 59.819 37.037 0.00 0.00 0.00 3.85
115 116 7.918076 TCACATCCAAAATAGACTAAGAGGTT 58.082 34.615 0.00 0.00 0.00 3.50
116 117 7.824289 TCACATCCAAAATAGACTAAGAGGTTG 59.176 37.037 0.00 0.00 0.00 3.77
117 118 7.607991 CACATCCAAAATAGACTAAGAGGTTGT 59.392 37.037 0.00 0.00 0.00 3.32
118 119 8.164070 ACATCCAAAATAGACTAAGAGGTTGTT 58.836 33.333 0.00 0.00 0.00 2.83
119 120 9.014297 CATCCAAAATAGACTAAGAGGTTGTTT 57.986 33.333 0.00 0.00 0.00 2.83
120 121 8.391075 TCCAAAATAGACTAAGAGGTTGTTTG 57.609 34.615 0.00 0.00 0.00 2.93
121 122 8.215050 TCCAAAATAGACTAAGAGGTTGTTTGA 58.785 33.333 0.00 0.00 0.00 2.69
122 123 8.846211 CCAAAATAGACTAAGAGGTTGTTTGAA 58.154 33.333 0.00 0.00 0.00 2.69
128 129 8.159344 AGACTAAGAGGTTGTTTGAATCTTTG 57.841 34.615 0.00 0.00 32.69 2.77
129 130 6.739112 ACTAAGAGGTTGTTTGAATCTTTGC 58.261 36.000 0.00 0.00 32.69 3.68
130 131 4.590850 AGAGGTTGTTTGAATCTTTGCC 57.409 40.909 0.00 0.00 0.00 4.52
131 132 3.321968 AGAGGTTGTTTGAATCTTTGCCC 59.678 43.478 0.00 0.00 0.00 5.36
132 133 3.037549 AGGTTGTTTGAATCTTTGCCCA 58.962 40.909 0.00 0.00 0.00 5.36
133 134 3.647590 AGGTTGTTTGAATCTTTGCCCAT 59.352 39.130 0.00 0.00 0.00 4.00
134 135 4.102996 AGGTTGTTTGAATCTTTGCCCATT 59.897 37.500 0.00 0.00 0.00 3.16
135 136 4.213906 GGTTGTTTGAATCTTTGCCCATTG 59.786 41.667 0.00 0.00 0.00 2.82
136 137 3.401182 TGTTTGAATCTTTGCCCATTGC 58.599 40.909 0.00 0.00 41.77 3.56
137 138 2.743664 GTTTGAATCTTTGCCCATTGCC 59.256 45.455 0.00 0.00 40.16 4.52
138 139 1.642112 TGAATCTTTGCCCATTGCCA 58.358 45.000 0.00 0.00 40.16 4.92
139 140 1.551430 TGAATCTTTGCCCATTGCCAG 59.449 47.619 0.00 0.00 40.16 4.85
140 141 0.251073 AATCTTTGCCCATTGCCAGC 59.749 50.000 0.00 0.00 40.16 4.85
141 142 1.952102 ATCTTTGCCCATTGCCAGCG 61.952 55.000 0.00 0.00 40.16 5.18
142 143 2.599875 TTTGCCCATTGCCAGCGA 60.600 55.556 0.00 0.00 40.16 4.93
143 144 2.157305 CTTTGCCCATTGCCAGCGAA 62.157 55.000 0.00 0.00 40.16 4.70
144 145 2.433231 TTTGCCCATTGCCAGCGAAC 62.433 55.000 0.00 0.00 40.16 3.95
145 146 4.481112 GCCCATTGCCAGCGAACG 62.481 66.667 0.00 0.00 0.00 3.95
146 147 3.814268 CCCATTGCCAGCGAACGG 61.814 66.667 0.00 0.00 0.00 4.44
179 180 3.127533 GCGGACAAATCGGCTGCT 61.128 61.111 0.00 0.00 45.31 4.24
180 181 2.690778 GCGGACAAATCGGCTGCTT 61.691 57.895 0.00 0.00 45.31 3.91
181 182 1.135315 CGGACAAATCGGCTGCTTG 59.865 57.895 0.00 0.00 0.00 4.01
182 183 1.153958 GGACAAATCGGCTGCTTGC 60.154 57.895 0.00 0.00 41.94 4.01
183 184 1.512734 GACAAATCGGCTGCTTGCG 60.513 57.895 0.00 0.00 44.05 4.85
184 185 2.877582 CAAATCGGCTGCTTGCGC 60.878 61.111 0.00 0.00 44.05 6.09
185 186 4.120331 AAATCGGCTGCTTGCGCC 62.120 61.111 4.18 14.93 44.05 6.53
210 211 3.051606 CAACGAATTGGCTACGGATTG 57.948 47.619 0.00 0.00 31.63 2.67
211 212 1.014352 ACGAATTGGCTACGGATTGC 58.986 50.000 0.00 0.00 0.00 3.56
212 213 1.013596 CGAATTGGCTACGGATTGCA 58.986 50.000 0.00 0.00 0.00 4.08
213 214 1.603802 CGAATTGGCTACGGATTGCAT 59.396 47.619 0.00 0.00 0.00 3.96
214 215 2.805671 CGAATTGGCTACGGATTGCATA 59.194 45.455 0.00 0.00 0.00 3.14
215 216 3.120546 CGAATTGGCTACGGATTGCATAG 60.121 47.826 0.00 0.00 0.00 2.23
216 217 2.254546 TTGGCTACGGATTGCATAGG 57.745 50.000 0.00 0.00 0.00 2.57
217 218 1.419381 TGGCTACGGATTGCATAGGA 58.581 50.000 0.00 0.00 0.00 2.94
218 219 1.765904 TGGCTACGGATTGCATAGGAA 59.234 47.619 0.00 0.00 0.00 3.36
219 220 2.171659 TGGCTACGGATTGCATAGGAAA 59.828 45.455 0.00 0.00 0.00 3.13
220 221 3.211045 GGCTACGGATTGCATAGGAAAA 58.789 45.455 0.00 0.00 0.00 2.29
221 222 3.003378 GGCTACGGATTGCATAGGAAAAC 59.997 47.826 0.00 0.00 0.00 2.43
222 223 3.877508 GCTACGGATTGCATAGGAAAACT 59.122 43.478 0.00 0.00 0.00 2.66
223 224 4.260784 GCTACGGATTGCATAGGAAAACTG 60.261 45.833 0.00 0.00 0.00 3.16
224 225 3.950397 ACGGATTGCATAGGAAAACTGA 58.050 40.909 0.00 0.00 0.00 3.41
225 226 3.689649 ACGGATTGCATAGGAAAACTGAC 59.310 43.478 0.00 0.00 0.00 3.51
226 227 3.941483 CGGATTGCATAGGAAAACTGACT 59.059 43.478 0.00 0.00 0.00 3.41
227 228 4.396166 CGGATTGCATAGGAAAACTGACTT 59.604 41.667 0.00 0.00 0.00 3.01
228 229 5.644644 GGATTGCATAGGAAAACTGACTTG 58.355 41.667 0.00 0.00 0.00 3.16
229 230 5.393461 GGATTGCATAGGAAAACTGACTTGG 60.393 44.000 0.00 0.00 0.00 3.61
230 231 4.365514 TGCATAGGAAAACTGACTTGGA 57.634 40.909 0.00 0.00 0.00 3.53
231 232 4.922206 TGCATAGGAAAACTGACTTGGAT 58.078 39.130 0.00 0.00 0.00 3.41
232 233 5.324409 TGCATAGGAAAACTGACTTGGATT 58.676 37.500 0.00 0.00 0.00 3.01
233 234 5.415701 TGCATAGGAAAACTGACTTGGATTC 59.584 40.000 0.00 0.00 0.00 2.52
234 235 5.447818 GCATAGGAAAACTGACTTGGATTCG 60.448 44.000 0.00 0.00 0.00 3.34
235 236 4.351874 AGGAAAACTGACTTGGATTCGA 57.648 40.909 0.00 0.00 0.00 3.71
236 237 4.319177 AGGAAAACTGACTTGGATTCGAG 58.681 43.478 0.00 0.00 0.00 4.04
237 238 3.120165 GGAAAACTGACTTGGATTCGAGC 60.120 47.826 0.00 0.00 0.00 5.03
238 239 1.714794 AACTGACTTGGATTCGAGCG 58.285 50.000 0.00 0.00 0.00 5.03
239 240 0.888619 ACTGACTTGGATTCGAGCGA 59.111 50.000 0.00 0.00 0.00 4.93
240 241 1.135257 ACTGACTTGGATTCGAGCGAG 60.135 52.381 0.00 0.00 0.00 5.03
241 242 0.458543 TGACTTGGATTCGAGCGAGC 60.459 55.000 0.00 0.00 0.00 5.03
242 243 1.148759 GACTTGGATTCGAGCGAGCC 61.149 60.000 6.84 6.84 0.00 4.70
243 244 1.153568 CTTGGATTCGAGCGAGCCA 60.154 57.895 10.99 10.99 0.00 4.75
244 245 0.740868 CTTGGATTCGAGCGAGCCAA 60.741 55.000 20.34 20.34 37.75 4.52
245 246 0.321210 TTGGATTCGAGCGAGCCAAA 60.321 50.000 19.74 9.20 37.41 3.28
246 247 0.107703 TGGATTCGAGCGAGCCAAAT 60.108 50.000 12.17 0.00 30.94 2.32
247 248 1.017387 GGATTCGAGCGAGCCAAATT 58.983 50.000 8.39 0.00 0.00 1.82
248 249 2.210116 GGATTCGAGCGAGCCAAATTA 58.790 47.619 8.39 0.00 0.00 1.40
249 250 2.808543 GGATTCGAGCGAGCCAAATTAT 59.191 45.455 8.39 0.00 0.00 1.28
250 251 3.120511 GGATTCGAGCGAGCCAAATTATC 60.121 47.826 8.39 0.39 0.00 1.75
251 252 2.890808 TCGAGCGAGCCAAATTATCT 57.109 45.000 0.00 0.00 0.00 1.98
252 253 2.473816 TCGAGCGAGCCAAATTATCTG 58.526 47.619 0.00 0.00 0.00 2.90
253 254 2.100749 TCGAGCGAGCCAAATTATCTGA 59.899 45.455 0.00 0.00 0.00 3.27
254 255 2.219674 CGAGCGAGCCAAATTATCTGAC 59.780 50.000 0.00 0.00 0.00 3.51
255 256 2.205074 AGCGAGCCAAATTATCTGACG 58.795 47.619 0.00 0.00 0.00 4.35
256 257 1.333258 GCGAGCCAAATTATCTGACGC 60.333 52.381 0.00 0.00 37.11 5.19
257 258 1.071239 CGAGCCAAATTATCTGACGCG 60.071 52.381 3.53 3.53 0.00 6.01
258 259 2.201732 GAGCCAAATTATCTGACGCGA 58.798 47.619 15.93 0.00 0.00 5.87
259 260 2.802816 GAGCCAAATTATCTGACGCGAT 59.197 45.455 15.93 0.00 0.00 4.58
260 261 2.545526 AGCCAAATTATCTGACGCGATG 59.454 45.455 15.93 1.69 0.00 3.84
261 262 2.908634 CCAAATTATCTGACGCGATGC 58.091 47.619 15.93 1.62 0.00 3.91
262 263 2.287644 CCAAATTATCTGACGCGATGCA 59.712 45.455 15.93 7.04 0.00 3.96
263 264 3.538780 CAAATTATCTGACGCGATGCAG 58.461 45.455 15.93 17.08 0.00 4.41
264 265 2.515926 ATTATCTGACGCGATGCAGT 57.484 45.000 15.93 10.17 33.90 4.40
265 266 1.559831 TTATCTGACGCGATGCAGTG 58.440 50.000 15.93 0.00 33.90 3.66
266 267 0.249031 TATCTGACGCGATGCAGTGG 60.249 55.000 15.93 0.00 33.90 4.00
267 268 1.948721 ATCTGACGCGATGCAGTGGA 61.949 55.000 15.93 2.30 33.90 4.02
268 269 1.520120 CTGACGCGATGCAGTGGAT 60.520 57.895 15.93 0.00 0.00 3.41
269 270 1.759293 CTGACGCGATGCAGTGGATG 61.759 60.000 15.93 0.00 0.00 3.51
277 278 3.857854 GCAGTGGATGCGAGCGTG 61.858 66.667 0.00 0.00 46.99 5.34
278 279 3.857854 CAGTGGATGCGAGCGTGC 61.858 66.667 1.73 1.73 0.00 5.34
279 280 4.074526 AGTGGATGCGAGCGTGCT 62.075 61.111 10.01 0.00 35.36 4.40
280 281 3.857854 GTGGATGCGAGCGTGCTG 61.858 66.667 10.01 0.00 35.36 4.41
283 284 3.121030 GATGCGAGCGTGCTGGTT 61.121 61.111 0.00 0.00 35.36 3.67
284 285 1.809619 GATGCGAGCGTGCTGGTTA 60.810 57.895 0.00 0.00 35.36 2.85
285 286 1.358725 GATGCGAGCGTGCTGGTTAA 61.359 55.000 0.00 0.00 35.36 2.01
286 287 0.744414 ATGCGAGCGTGCTGGTTAAT 60.744 50.000 0.00 0.00 35.36 1.40
287 288 1.060937 GCGAGCGTGCTGGTTAATG 59.939 57.895 0.00 0.00 0.00 1.90
288 289 1.060937 CGAGCGTGCTGGTTAATGC 59.939 57.895 0.00 0.00 0.00 3.56
289 290 1.429423 GAGCGTGCTGGTTAATGCC 59.571 57.895 0.00 0.00 0.00 4.40
290 291 1.303236 AGCGTGCTGGTTAATGCCA 60.303 52.632 0.00 0.00 36.97 4.92
291 292 0.893270 AGCGTGCTGGTTAATGCCAA 60.893 50.000 0.00 0.00 38.18 4.52
292 293 0.038709 GCGTGCTGGTTAATGCCAAA 60.039 50.000 0.00 0.00 38.18 3.28
293 294 1.604185 GCGTGCTGGTTAATGCCAAAA 60.604 47.619 0.00 0.00 38.18 2.44
294 295 2.930455 GCGTGCTGGTTAATGCCAAAAT 60.930 45.455 0.00 0.00 38.18 1.82
295 296 3.324993 CGTGCTGGTTAATGCCAAAATT 58.675 40.909 0.00 0.00 38.18 1.82
296 297 3.745458 CGTGCTGGTTAATGCCAAAATTT 59.255 39.130 0.00 0.00 38.18 1.82
297 298 4.213059 CGTGCTGGTTAATGCCAAAATTTT 59.787 37.500 0.00 0.00 38.18 1.82
298 299 5.451039 GTGCTGGTTAATGCCAAAATTTTG 58.549 37.500 21.65 21.65 38.18 2.44
310 311 4.650545 CAAAATTTTGGATTGGCAGACG 57.349 40.909 21.00 0.00 34.59 4.18
311 312 3.317603 AAATTTTGGATTGGCAGACGG 57.682 42.857 0.00 0.00 0.00 4.79
312 313 0.532115 ATTTTGGATTGGCAGACGGC 59.468 50.000 0.00 0.00 43.74 5.68
321 322 2.742372 GCAGACGGCAACACGGAT 60.742 61.111 0.00 0.00 43.97 4.18
322 323 2.740714 GCAGACGGCAACACGGATC 61.741 63.158 0.00 0.00 43.97 3.36
323 324 2.100631 CAGACGGCAACACGGATCC 61.101 63.158 0.00 0.00 38.39 3.36
324 325 2.047655 GACGGCAACACGGATCCA 60.048 61.111 13.41 0.00 38.39 3.41
325 326 1.669760 GACGGCAACACGGATCCAA 60.670 57.895 13.41 0.00 38.39 3.53
326 327 1.228003 ACGGCAACACGGATCCAAA 60.228 52.632 13.41 0.00 38.39 3.28
327 328 1.209127 CGGCAACACGGATCCAAAC 59.791 57.895 13.41 0.00 0.00 2.93
328 329 1.511318 CGGCAACACGGATCCAAACA 61.511 55.000 13.41 0.00 0.00 2.83
329 330 0.671251 GGCAACACGGATCCAAACAA 59.329 50.000 13.41 0.00 0.00 2.83
330 331 1.335872 GGCAACACGGATCCAAACAAG 60.336 52.381 13.41 0.00 0.00 3.16
331 332 1.930371 GCAACACGGATCCAAACAAGC 60.930 52.381 13.41 4.45 0.00 4.01
332 333 1.608590 CAACACGGATCCAAACAAGCT 59.391 47.619 13.41 0.00 0.00 3.74
333 334 1.523758 ACACGGATCCAAACAAGCTC 58.476 50.000 13.41 0.00 0.00 4.09
334 335 1.072331 ACACGGATCCAAACAAGCTCT 59.928 47.619 13.41 0.00 0.00 4.09
335 336 2.301870 ACACGGATCCAAACAAGCTCTA 59.698 45.455 13.41 0.00 0.00 2.43
336 337 3.244422 ACACGGATCCAAACAAGCTCTAA 60.244 43.478 13.41 0.00 0.00 2.10
337 338 3.372206 CACGGATCCAAACAAGCTCTAAG 59.628 47.826 13.41 0.00 0.00 2.18
338 339 3.008049 ACGGATCCAAACAAGCTCTAAGT 59.992 43.478 13.41 0.00 0.00 2.24
339 340 4.222145 ACGGATCCAAACAAGCTCTAAGTA 59.778 41.667 13.41 0.00 0.00 2.24
340 341 4.806247 CGGATCCAAACAAGCTCTAAGTAG 59.194 45.833 13.41 0.00 0.00 2.57
341 342 4.572795 GGATCCAAACAAGCTCTAAGTAGC 59.427 45.833 6.95 0.00 43.11 3.58
342 343 3.939066 TCCAAACAAGCTCTAAGTAGCC 58.061 45.455 0.00 0.00 43.86 3.93
343 344 3.010420 CCAAACAAGCTCTAAGTAGCCC 58.990 50.000 0.00 0.00 43.86 5.19
344 345 3.307762 CCAAACAAGCTCTAAGTAGCCCT 60.308 47.826 0.00 0.00 43.86 5.19
345 346 3.618690 AACAAGCTCTAAGTAGCCCTG 57.381 47.619 0.00 0.00 43.86 4.45
346 347 2.541466 ACAAGCTCTAAGTAGCCCTGT 58.459 47.619 0.00 0.00 43.86 4.00
347 348 2.498078 ACAAGCTCTAAGTAGCCCTGTC 59.502 50.000 0.00 0.00 43.86 3.51
348 349 2.497675 CAAGCTCTAAGTAGCCCTGTCA 59.502 50.000 0.00 0.00 43.86 3.58
349 350 3.039252 AGCTCTAAGTAGCCCTGTCAT 57.961 47.619 0.00 0.00 43.86 3.06
350 351 2.962421 AGCTCTAAGTAGCCCTGTCATC 59.038 50.000 0.00 0.00 43.86 2.92
351 352 2.036604 GCTCTAAGTAGCCCTGTCATCC 59.963 54.545 0.00 0.00 36.45 3.51
352 353 3.300388 CTCTAAGTAGCCCTGTCATCCA 58.700 50.000 0.00 0.00 0.00 3.41
353 354 3.300388 TCTAAGTAGCCCTGTCATCCAG 58.700 50.000 0.00 0.00 41.15 3.86
354 355 1.958288 AAGTAGCCCTGTCATCCAGT 58.042 50.000 0.00 0.00 39.74 4.00
355 356 1.198713 AGTAGCCCTGTCATCCAGTG 58.801 55.000 0.00 0.00 39.74 3.66
356 357 1.195115 GTAGCCCTGTCATCCAGTGA 58.805 55.000 0.00 0.00 39.74 3.41
357 358 1.555075 GTAGCCCTGTCATCCAGTGAA 59.445 52.381 0.00 0.00 39.74 3.18
358 359 1.067295 AGCCCTGTCATCCAGTGAAA 58.933 50.000 0.00 0.00 39.74 2.69
359 360 1.168714 GCCCTGTCATCCAGTGAAAC 58.831 55.000 0.00 0.00 39.74 2.78
360 361 1.545428 GCCCTGTCATCCAGTGAAACA 60.545 52.381 0.00 0.00 41.43 2.83
361 362 2.862541 CCCTGTCATCCAGTGAAACAA 58.137 47.619 0.00 0.00 41.43 2.83
362 363 2.554032 CCCTGTCATCCAGTGAAACAAC 59.446 50.000 0.00 0.00 41.43 3.32
363 364 3.213506 CCTGTCATCCAGTGAAACAACA 58.786 45.455 0.00 0.00 41.43 3.33
364 365 3.251729 CCTGTCATCCAGTGAAACAACAG 59.748 47.826 0.00 0.00 41.43 3.16
365 366 4.129380 CTGTCATCCAGTGAAACAACAGA 58.871 43.478 0.00 0.00 41.43 3.41
366 367 3.876914 TGTCATCCAGTGAAACAACAGAC 59.123 43.478 0.00 0.00 41.43 3.51
367 368 3.876914 GTCATCCAGTGAAACAACAGACA 59.123 43.478 0.00 0.00 41.43 3.41
368 369 4.516698 GTCATCCAGTGAAACAACAGACAT 59.483 41.667 0.00 0.00 41.43 3.06
369 370 5.700832 GTCATCCAGTGAAACAACAGACATA 59.299 40.000 0.00 0.00 41.43 2.29
370 371 6.204688 GTCATCCAGTGAAACAACAGACATAA 59.795 38.462 0.00 0.00 41.43 1.90
371 372 6.770303 TCATCCAGTGAAACAACAGACATAAA 59.230 34.615 0.00 0.00 41.43 1.40
372 373 7.284261 TCATCCAGTGAAACAACAGACATAAAA 59.716 33.333 0.00 0.00 41.43 1.52
373 374 6.791303 TCCAGTGAAACAACAGACATAAAAC 58.209 36.000 0.00 0.00 41.43 2.43
374 375 6.601613 TCCAGTGAAACAACAGACATAAAACT 59.398 34.615 0.00 0.00 41.43 2.66
375 376 6.692681 CCAGTGAAACAACAGACATAAAACTG 59.307 38.462 0.00 0.00 41.43 3.16
376 377 7.415095 CCAGTGAAACAACAGACATAAAACTGA 60.415 37.037 0.00 0.00 41.43 3.41
377 378 7.429340 CAGTGAAACAACAGACATAAAACTGAC 59.571 37.037 0.00 0.00 41.43 3.51
378 379 6.691388 GTGAAACAACAGACATAAAACTGACC 59.309 38.462 0.00 0.00 35.94 4.02
379 380 6.601613 TGAAACAACAGACATAAAACTGACCT 59.398 34.615 0.00 0.00 37.54 3.85
380 381 6.619801 AACAACAGACATAAAACTGACCTC 57.380 37.500 0.00 0.00 37.54 3.85
381 382 4.750098 ACAACAGACATAAAACTGACCTCG 59.250 41.667 0.00 0.00 37.54 4.63
382 383 4.602340 ACAGACATAAAACTGACCTCGT 57.398 40.909 0.00 0.00 37.54 4.18
383 384 5.717078 ACAGACATAAAACTGACCTCGTA 57.283 39.130 0.00 0.00 37.54 3.43
384 385 6.092955 ACAGACATAAAACTGACCTCGTAA 57.907 37.500 0.00 0.00 37.54 3.18
385 386 6.698380 ACAGACATAAAACTGACCTCGTAAT 58.302 36.000 0.00 0.00 37.54 1.89
386 387 7.833786 ACAGACATAAAACTGACCTCGTAATA 58.166 34.615 0.00 0.00 37.54 0.98
387 388 8.308931 ACAGACATAAAACTGACCTCGTAATAA 58.691 33.333 0.00 0.00 37.54 1.40
388 389 8.808529 CAGACATAAAACTGACCTCGTAATAAG 58.191 37.037 0.00 0.00 36.38 1.73
389 390 8.529476 AGACATAAAACTGACCTCGTAATAAGT 58.471 33.333 0.00 0.00 0.00 2.24
390 391 9.793252 GACATAAAACTGACCTCGTAATAAGTA 57.207 33.333 0.00 0.00 0.00 2.24
391 392 9.578439 ACATAAAACTGACCTCGTAATAAGTAC 57.422 33.333 0.00 0.00 0.00 2.73
392 393 9.577110 CATAAAACTGACCTCGTAATAAGTACA 57.423 33.333 0.00 0.00 32.45 2.90
412 413 9.871238 AAGTACATATAATTTCTTCGACACACT 57.129 29.630 0.00 0.00 0.00 3.55
416 417 9.871238 ACATATAATTTCTTCGACACACTAGTT 57.129 29.630 0.00 0.00 0.00 2.24
421 422 7.988904 ATTTCTTCGACACACTAGTTATAGC 57.011 36.000 0.00 0.00 31.66 2.97
422 423 6.505044 TTCTTCGACACACTAGTTATAGCA 57.495 37.500 0.00 0.00 31.66 3.49
423 424 6.120378 TCTTCGACACACTAGTTATAGCAG 57.880 41.667 0.00 0.00 31.66 4.24
424 425 4.895224 TCGACACACTAGTTATAGCAGG 57.105 45.455 0.00 0.00 31.66 4.85
425 426 4.520179 TCGACACACTAGTTATAGCAGGA 58.480 43.478 0.00 0.00 31.66 3.86
426 427 4.945543 TCGACACACTAGTTATAGCAGGAA 59.054 41.667 0.00 0.00 31.66 3.36
427 428 5.035443 CGACACACTAGTTATAGCAGGAAC 58.965 45.833 0.00 0.00 31.66 3.62
428 429 5.340439 ACACACTAGTTATAGCAGGAACC 57.660 43.478 0.00 0.00 31.66 3.62
429 430 5.024118 ACACACTAGTTATAGCAGGAACCT 58.976 41.667 0.00 0.00 31.66 3.50
430 431 5.127356 ACACACTAGTTATAGCAGGAACCTC 59.873 44.000 0.00 0.00 31.66 3.85
431 432 4.650131 ACACTAGTTATAGCAGGAACCTCC 59.350 45.833 0.00 0.00 32.28 4.30
432 433 4.039366 CACTAGTTATAGCAGGAACCTCCC 59.961 50.000 0.00 0.00 32.43 4.30
433 434 3.130734 AGTTATAGCAGGAACCTCCCA 57.869 47.619 0.00 0.00 37.19 4.37
434 435 3.041946 AGTTATAGCAGGAACCTCCCAG 58.958 50.000 0.00 0.00 37.19 4.45
435 436 2.772515 GTTATAGCAGGAACCTCCCAGT 59.227 50.000 0.00 0.00 37.19 4.00
436 437 1.207791 ATAGCAGGAACCTCCCAGTG 58.792 55.000 0.00 0.00 37.19 3.66
437 438 0.178903 TAGCAGGAACCTCCCAGTGT 60.179 55.000 0.00 0.00 37.19 3.55
438 439 1.302832 GCAGGAACCTCCCAGTGTG 60.303 63.158 0.00 0.00 37.19 3.82
439 440 1.768684 GCAGGAACCTCCCAGTGTGA 61.769 60.000 0.00 0.00 37.19 3.58
440 441 0.035458 CAGGAACCTCCCAGTGTGAC 59.965 60.000 0.00 0.00 37.19 3.67
441 442 0.399949 AGGAACCTCCCAGTGTGACA 60.400 55.000 0.00 0.00 37.19 3.58
442 443 0.693049 GGAACCTCCCAGTGTGACAT 59.307 55.000 0.00 0.00 0.00 3.06
443 444 1.611673 GGAACCTCCCAGTGTGACATG 60.612 57.143 0.00 0.00 0.00 3.21
444 445 1.347707 GAACCTCCCAGTGTGACATGA 59.652 52.381 0.00 0.00 0.00 3.07
445 446 1.661463 ACCTCCCAGTGTGACATGAT 58.339 50.000 0.00 0.00 0.00 2.45
446 447 1.280133 ACCTCCCAGTGTGACATGATG 59.720 52.381 0.00 0.00 0.00 3.07
447 448 1.556451 CCTCCCAGTGTGACATGATGA 59.444 52.381 0.00 0.00 0.00 2.92
448 449 2.419713 CCTCCCAGTGTGACATGATGAG 60.420 54.545 0.00 0.00 0.00 2.90
449 450 2.498885 CTCCCAGTGTGACATGATGAGA 59.501 50.000 0.00 0.00 0.00 3.27
450 451 2.498885 TCCCAGTGTGACATGATGAGAG 59.501 50.000 0.00 0.00 0.00 3.20
451 452 2.277969 CCAGTGTGACATGATGAGAGC 58.722 52.381 0.00 0.00 0.00 4.09
452 453 2.354403 CCAGTGTGACATGATGAGAGCA 60.354 50.000 0.00 0.00 0.00 4.26
453 454 2.671888 CAGTGTGACATGATGAGAGCAC 59.328 50.000 0.00 3.06 0.00 4.40
454 455 1.657594 GTGTGACATGATGAGAGCACG 59.342 52.381 0.00 0.00 0.00 5.34
455 456 1.545582 TGTGACATGATGAGAGCACGA 59.454 47.619 0.00 0.00 0.00 4.35
456 457 2.029110 TGTGACATGATGAGAGCACGAA 60.029 45.455 0.00 0.00 0.00 3.85
457 458 2.602211 GTGACATGATGAGAGCACGAAG 59.398 50.000 0.00 0.00 0.00 3.79
459 460 3.257393 GACATGATGAGAGCACGAAGTT 58.743 45.455 0.00 0.00 41.61 2.66
460 461 4.082245 TGACATGATGAGAGCACGAAGTTA 60.082 41.667 0.00 0.00 41.61 2.24
461 462 4.820897 ACATGATGAGAGCACGAAGTTAA 58.179 39.130 0.00 0.00 41.61 2.01
462 463 5.423015 ACATGATGAGAGCACGAAGTTAAT 58.577 37.500 0.00 0.00 41.61 1.40
463 464 5.521735 ACATGATGAGAGCACGAAGTTAATC 59.478 40.000 0.00 0.00 41.61 1.75
464 465 5.072040 TGATGAGAGCACGAAGTTAATCA 57.928 39.130 0.00 0.00 41.61 2.57
465 466 4.864806 TGATGAGAGCACGAAGTTAATCAC 59.135 41.667 0.00 0.00 41.61 3.06
466 467 4.521130 TGAGAGCACGAAGTTAATCACT 57.479 40.909 0.00 0.00 41.61 3.41
467 468 5.638596 TGAGAGCACGAAGTTAATCACTA 57.361 39.130 0.00 0.00 41.61 2.74
468 469 5.399858 TGAGAGCACGAAGTTAATCACTAC 58.600 41.667 0.00 0.00 41.61 2.73
469 470 5.183331 TGAGAGCACGAAGTTAATCACTACT 59.817 40.000 0.00 0.00 41.61 2.57
470 471 6.373495 TGAGAGCACGAAGTTAATCACTACTA 59.627 38.462 0.00 0.00 41.61 1.82
471 472 6.787225 AGAGCACGAAGTTAATCACTACTAG 58.213 40.000 0.00 0.00 41.61 2.57
472 473 6.374894 AGAGCACGAAGTTAATCACTACTAGT 59.625 38.462 0.00 0.00 41.61 2.57
473 474 6.921914 AGCACGAAGTTAATCACTACTAGTT 58.078 36.000 0.00 0.00 41.61 2.24
474 475 7.376615 AGCACGAAGTTAATCACTACTAGTTT 58.623 34.615 0.00 0.00 41.61 2.66
475 476 7.328737 AGCACGAAGTTAATCACTACTAGTTTG 59.671 37.037 0.00 0.00 41.61 2.93
476 477 7.115947 GCACGAAGTTAATCACTACTAGTTTGT 59.884 37.037 0.00 0.00 41.61 2.83
477 478 9.616634 CACGAAGTTAATCACTACTAGTTTGTA 57.383 33.333 0.00 0.00 41.61 2.41
478 479 9.617975 ACGAAGTTAATCACTACTAGTTTGTAC 57.382 33.333 0.00 0.00 37.78 2.90
479 480 9.837525 CGAAGTTAATCACTACTAGTTTGTACT 57.162 33.333 0.00 0.00 32.94 2.73
482 483 8.747471 AGTTAATCACTACTAGTTTGTACTCCC 58.253 37.037 0.00 0.00 32.70 4.30
483 484 8.526147 GTTAATCACTACTAGTTTGTACTCCCA 58.474 37.037 0.00 0.00 35.78 4.37
484 485 7.549147 AATCACTACTAGTTTGTACTCCCAA 57.451 36.000 0.00 0.00 35.78 4.12
485 486 7.735326 ATCACTACTAGTTTGTACTCCCAAT 57.265 36.000 0.00 0.00 35.78 3.16
486 487 6.931838 TCACTACTAGTTTGTACTCCCAATG 58.068 40.000 0.00 0.00 35.78 2.82
487 488 6.495872 TCACTACTAGTTTGTACTCCCAATGT 59.504 38.462 0.00 0.00 35.78 2.71
488 489 6.590292 CACTACTAGTTTGTACTCCCAATGTG 59.410 42.308 0.00 0.00 35.78 3.21
489 490 5.818678 ACTAGTTTGTACTCCCAATGTGA 57.181 39.130 0.00 0.00 35.78 3.58
490 491 6.374417 ACTAGTTTGTACTCCCAATGTGAT 57.626 37.500 0.00 0.00 35.78 3.06
491 492 6.407202 ACTAGTTTGTACTCCCAATGTGATC 58.593 40.000 0.00 0.00 35.78 2.92
492 493 5.505181 AGTTTGTACTCCCAATGTGATCT 57.495 39.130 0.00 0.00 0.00 2.75
493 494 6.620877 AGTTTGTACTCCCAATGTGATCTA 57.379 37.500 0.00 0.00 0.00 1.98
528 529 4.063689 CCATGCATGTTTAGCTAGGAGAG 58.936 47.826 24.58 0.87 0.00 3.20
557 558 6.723298 TTAAGAAGTTCAAAATCAGCCCAA 57.277 33.333 5.50 0.00 0.00 4.12
568 569 2.115052 AGCCCAAATGTGTCGCCA 59.885 55.556 0.00 0.00 0.00 5.69
586 587 5.006165 GTCGCCATTGTTCTTCTAATCTCAG 59.994 44.000 0.00 0.00 0.00 3.35
608 609 0.470341 GGCGCCCTTATCTCCTTCTT 59.530 55.000 18.11 0.00 0.00 2.52
626 627 6.603201 TCCTTCTTTGTTGTCATCTTCAGTTT 59.397 34.615 0.00 0.00 0.00 2.66
715 716 0.038251 TCTCCGCGTCCATCATATGC 60.038 55.000 4.92 0.00 0.00 3.14
716 717 1.005037 TCCGCGTCCATCATATGCC 60.005 57.895 4.92 0.00 0.00 4.40
718 719 1.004560 CGCGTCCATCATATGCCCT 60.005 57.895 0.00 0.00 0.00 5.19
811 838 3.119137 GCACTTGGTTGAGTTGTTTTCCT 60.119 43.478 0.00 0.00 0.00 3.36
872 905 6.092807 CCAAATGTGTCTCTTTAGCCTAACTC 59.907 42.308 0.00 0.00 0.00 3.01
873 906 6.360370 AATGTGTCTCTTTAGCCTAACTCA 57.640 37.500 0.00 0.00 0.00 3.41
874 907 5.392767 TGTGTCTCTTTAGCCTAACTCAG 57.607 43.478 0.00 0.00 0.00 3.35
875 908 4.177783 GTGTCTCTTTAGCCTAACTCAGC 58.822 47.826 0.00 0.00 0.00 4.26
876 909 3.195825 TGTCTCTTTAGCCTAACTCAGCC 59.804 47.826 0.00 0.00 0.00 4.85
916 961 2.047179 GGCTCCTCAACGGTGGAC 60.047 66.667 0.00 0.00 33.32 4.02
941 990 0.823356 ACCTCAGCACCAACGCAAAT 60.823 50.000 0.00 0.00 0.00 2.32
1123 1196 0.256177 CTCCCCAAACCCTAGCTTCC 59.744 60.000 0.00 0.00 0.00 3.46
1456 1530 1.556911 AGCTGCAGTACTACATGCCTT 59.443 47.619 16.64 0.00 41.85 4.35
1589 1667 3.545703 GGCTAGGTGCTTGTGATATTGT 58.454 45.455 0.00 0.00 42.39 2.71
2168 2281 1.815003 CACATGAGCCAAGAAAGGACC 59.185 52.381 0.00 0.00 0.00 4.46
2182 2463 7.253422 CAAGAAAGGACCATGATGTAATTGTC 58.747 38.462 0.00 0.00 0.00 3.18
2237 2518 0.470766 TGGGTTGGTCGTTGCTAACT 59.529 50.000 0.00 0.00 31.70 2.24
2331 2619 6.688637 TTGATTGGCTATGAACTTCTCATG 57.311 37.500 0.00 0.00 44.84 3.07
2608 2995 3.065925 CACCTGGCTTTAGCTTAATCTGC 59.934 47.826 0.00 0.00 41.70 4.26
2720 3108 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2721 3109 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2723 3111 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
2724 3112 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
2726 3114 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
2834 3224 5.501156 AGTTGGATCAGAGGTAACCATTTC 58.499 41.667 0.00 0.00 37.17 2.17
2835 3225 5.014123 AGTTGGATCAGAGGTAACCATTTCA 59.986 40.000 0.00 0.00 37.17 2.69
2871 3261 0.400594 GGAAACACCTACTGGGCTGT 59.599 55.000 0.00 0.00 39.10 4.40
2882 3272 5.041191 CTACTGGGCTGTAGGATGAATTT 57.959 43.478 9.30 0.00 37.01 1.82
2974 3364 1.908299 GGAGGGTTGGCAACTTGGG 60.908 63.158 27.77 0.00 37.61 4.12
2977 3367 1.005450 GAGGGTTGGCAACTTGGGATA 59.995 52.381 27.77 0.00 37.61 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.014128 GGCCAGAACAAAAGCGCTATA 58.986 47.619 12.05 0.00 0.00 1.31
1 2 0.811281 GGCCAGAACAAAAGCGCTAT 59.189 50.000 12.05 0.00 0.00 2.97
3 4 2.564721 GGGCCAGAACAAAAGCGCT 61.565 57.895 2.64 2.64 35.50 5.92
6 7 1.869774 CTTTGGGCCAGAACAAAAGC 58.130 50.000 6.23 0.00 36.29 3.51
10 11 2.170166 CATAGCTTTGGGCCAGAACAA 58.830 47.619 6.23 0.00 43.05 2.83
13 14 3.594453 CCATAGCTTTGGGCCAGAA 57.406 52.632 14.94 3.61 43.05 3.02
20 21 2.180204 CGCCGACCCATAGCTTTGG 61.180 63.158 15.71 15.71 36.46 3.28
21 22 2.180204 CCGCCGACCCATAGCTTTG 61.180 63.158 0.00 0.00 0.00 2.77
22 23 2.189521 CCGCCGACCCATAGCTTT 59.810 61.111 0.00 0.00 0.00 3.51
24 25 3.849951 CACCGCCGACCCATAGCT 61.850 66.667 0.00 0.00 0.00 3.32
25 26 4.910585 CCACCGCCGACCCATAGC 62.911 72.222 0.00 0.00 0.00 2.97
26 27 4.235762 CCCACCGCCGACCCATAG 62.236 72.222 0.00 0.00 0.00 2.23
27 28 2.659946 TATCCCACCGCCGACCCATA 62.660 60.000 0.00 0.00 0.00 2.74
29 30 4.781616 TATCCCACCGCCGACCCA 62.782 66.667 0.00 0.00 0.00 4.51
30 31 4.231439 GTATCCCACCGCCGACCC 62.231 72.222 0.00 0.00 0.00 4.46
31 32 2.710724 GATGTATCCCACCGCCGACC 62.711 65.000 0.00 0.00 0.00 4.79
32 33 1.300697 GATGTATCCCACCGCCGAC 60.301 63.158 0.00 0.00 0.00 4.79
33 34 1.744320 CTGATGTATCCCACCGCCGA 61.744 60.000 0.00 0.00 0.00 5.54
34 35 1.300931 CTGATGTATCCCACCGCCG 60.301 63.158 0.00 0.00 0.00 6.46
35 36 1.598130 GCTGATGTATCCCACCGCC 60.598 63.158 0.00 0.00 0.00 6.13
36 37 0.882042 CAGCTGATGTATCCCACCGC 60.882 60.000 8.42 0.00 0.00 5.68
37 38 0.882042 GCAGCTGATGTATCCCACCG 60.882 60.000 20.43 0.00 0.00 4.94
38 39 0.471617 AGCAGCTGATGTATCCCACC 59.528 55.000 20.43 0.00 0.00 4.61
39 40 2.630098 TCTAGCAGCTGATGTATCCCAC 59.370 50.000 20.43 0.00 0.00 4.61
40 41 2.896044 CTCTAGCAGCTGATGTATCCCA 59.104 50.000 20.43 0.00 0.00 4.37
41 42 2.896685 ACTCTAGCAGCTGATGTATCCC 59.103 50.000 20.43 0.00 0.00 3.85
42 43 4.305769 CAACTCTAGCAGCTGATGTATCC 58.694 47.826 20.43 0.00 0.00 2.59
43 44 3.740321 GCAACTCTAGCAGCTGATGTATC 59.260 47.826 20.43 0.00 0.00 2.24
44 45 3.387374 AGCAACTCTAGCAGCTGATGTAT 59.613 43.478 20.43 0.00 35.72 2.29
45 46 2.762887 AGCAACTCTAGCAGCTGATGTA 59.237 45.455 20.43 2.52 35.72 2.29
46 47 1.554160 AGCAACTCTAGCAGCTGATGT 59.446 47.619 20.43 2.03 35.72 3.06
47 48 2.159071 AGAGCAACTCTAGCAGCTGATG 60.159 50.000 20.43 6.48 39.28 3.07
48 49 2.109774 AGAGCAACTCTAGCAGCTGAT 58.890 47.619 20.43 15.46 39.28 2.90
49 50 1.554836 AGAGCAACTCTAGCAGCTGA 58.445 50.000 20.43 0.00 39.28 4.26
50 51 2.383368 AAGAGCAACTCTAGCAGCTG 57.617 50.000 10.11 10.11 40.28 4.24
51 52 2.159114 GCTAAGAGCAACTCTAGCAGCT 60.159 50.000 0.00 0.00 40.28 4.24
52 53 2.200899 GCTAAGAGCAACTCTAGCAGC 58.799 52.381 15.23 12.28 40.28 5.25
53 54 2.430332 AGGCTAAGAGCAACTCTAGCAG 59.570 50.000 18.82 10.27 44.75 4.24
54 55 2.428890 GAGGCTAAGAGCAACTCTAGCA 59.571 50.000 18.82 2.67 44.75 3.49
55 56 2.693074 AGAGGCTAAGAGCAACTCTAGC 59.307 50.000 13.24 13.24 44.75 3.42
56 57 4.202111 GGAAGAGGCTAAGAGCAACTCTAG 60.202 50.000 7.42 0.00 44.75 2.43
57 58 3.702045 GGAAGAGGCTAAGAGCAACTCTA 59.298 47.826 7.42 0.00 44.75 2.43
58 59 2.499693 GGAAGAGGCTAAGAGCAACTCT 59.500 50.000 0.21 1.55 44.75 3.24
59 60 2.234908 TGGAAGAGGCTAAGAGCAACTC 59.765 50.000 0.21 0.00 44.75 3.01
60 61 2.260822 TGGAAGAGGCTAAGAGCAACT 58.739 47.619 0.21 0.00 44.75 3.16
61 62 2.770164 TGGAAGAGGCTAAGAGCAAC 57.230 50.000 0.21 0.00 44.75 4.17
62 63 2.681976 GCATGGAAGAGGCTAAGAGCAA 60.682 50.000 0.21 0.00 44.75 3.91
63 64 1.134280 GCATGGAAGAGGCTAAGAGCA 60.134 52.381 0.21 0.00 44.75 4.26
64 65 1.592064 GCATGGAAGAGGCTAAGAGC 58.408 55.000 0.00 0.00 41.46 4.09
65 66 1.539929 CGGCATGGAAGAGGCTAAGAG 60.540 57.143 0.00 0.00 0.00 2.85
66 67 0.465705 CGGCATGGAAGAGGCTAAGA 59.534 55.000 0.00 0.00 0.00 2.10
67 68 0.465705 TCGGCATGGAAGAGGCTAAG 59.534 55.000 0.00 0.00 0.00 2.18
68 69 0.178068 GTCGGCATGGAAGAGGCTAA 59.822 55.000 0.00 0.00 0.00 3.09
69 70 0.975556 TGTCGGCATGGAAGAGGCTA 60.976 55.000 0.00 0.00 0.00 3.93
70 71 2.293318 TGTCGGCATGGAAGAGGCT 61.293 57.895 0.00 0.00 0.00 4.58
71 72 2.109126 GTGTCGGCATGGAAGAGGC 61.109 63.158 0.00 0.00 0.00 4.70
72 73 0.460987 GAGTGTCGGCATGGAAGAGG 60.461 60.000 0.00 0.00 0.00 3.69
73 74 0.247460 TGAGTGTCGGCATGGAAGAG 59.753 55.000 0.00 0.00 0.00 2.85
74 75 0.037326 GTGAGTGTCGGCATGGAAGA 60.037 55.000 0.00 0.00 0.00 2.87
75 76 0.320683 TGTGAGTGTCGGCATGGAAG 60.321 55.000 0.00 0.00 0.00 3.46
76 77 0.324614 ATGTGAGTGTCGGCATGGAA 59.675 50.000 0.00 0.00 0.00 3.53
77 78 0.108186 GATGTGAGTGTCGGCATGGA 60.108 55.000 0.00 0.00 0.00 3.41
78 79 1.091771 GGATGTGAGTGTCGGCATGG 61.092 60.000 0.00 0.00 0.00 3.66
79 80 0.391528 TGGATGTGAGTGTCGGCATG 60.392 55.000 0.00 0.00 0.00 4.06
80 81 0.324614 TTGGATGTGAGTGTCGGCAT 59.675 50.000 0.00 0.00 0.00 4.40
81 82 0.107643 TTTGGATGTGAGTGTCGGCA 59.892 50.000 0.00 0.00 0.00 5.69
82 83 1.234821 TTTTGGATGTGAGTGTCGGC 58.765 50.000 0.00 0.00 0.00 5.54
83 84 4.330074 GTCTATTTTGGATGTGAGTGTCGG 59.670 45.833 0.00 0.00 0.00 4.79
84 85 5.171476 AGTCTATTTTGGATGTGAGTGTCG 58.829 41.667 0.00 0.00 0.00 4.35
85 86 8.035394 TCTTAGTCTATTTTGGATGTGAGTGTC 58.965 37.037 0.00 0.00 0.00 3.67
86 87 7.907389 TCTTAGTCTATTTTGGATGTGAGTGT 58.093 34.615 0.00 0.00 0.00 3.55
87 88 7.493971 CCTCTTAGTCTATTTTGGATGTGAGTG 59.506 40.741 0.00 0.00 0.00 3.51
88 89 7.181125 ACCTCTTAGTCTATTTTGGATGTGAGT 59.819 37.037 0.00 0.00 0.00 3.41
89 90 7.560368 ACCTCTTAGTCTATTTTGGATGTGAG 58.440 38.462 0.00 0.00 0.00 3.51
90 91 7.496346 ACCTCTTAGTCTATTTTGGATGTGA 57.504 36.000 0.00 0.00 0.00 3.58
91 92 7.607991 ACAACCTCTTAGTCTATTTTGGATGTG 59.392 37.037 0.00 0.00 30.25 3.21
92 93 7.690256 ACAACCTCTTAGTCTATTTTGGATGT 58.310 34.615 0.00 0.00 0.00 3.06
93 94 8.567285 AACAACCTCTTAGTCTATTTTGGATG 57.433 34.615 0.00 0.00 0.00 3.51
94 95 9.014297 CAAACAACCTCTTAGTCTATTTTGGAT 57.986 33.333 0.00 0.00 0.00 3.41
95 96 8.215050 TCAAACAACCTCTTAGTCTATTTTGGA 58.785 33.333 0.00 0.00 0.00 3.53
96 97 8.391075 TCAAACAACCTCTTAGTCTATTTTGG 57.609 34.615 0.00 0.00 0.00 3.28
102 103 9.273016 CAAAGATTCAAACAACCTCTTAGTCTA 57.727 33.333 0.00 0.00 0.00 2.59
103 104 7.255277 GCAAAGATTCAAACAACCTCTTAGTCT 60.255 37.037 0.00 0.00 0.00 3.24
104 105 6.858478 GCAAAGATTCAAACAACCTCTTAGTC 59.142 38.462 0.00 0.00 0.00 2.59
105 106 6.239036 GGCAAAGATTCAAACAACCTCTTAGT 60.239 38.462 0.00 0.00 0.00 2.24
106 107 6.152379 GGCAAAGATTCAAACAACCTCTTAG 58.848 40.000 0.00 0.00 0.00 2.18
107 108 5.010617 GGGCAAAGATTCAAACAACCTCTTA 59.989 40.000 0.00 0.00 0.00 2.10
108 109 4.202253 GGGCAAAGATTCAAACAACCTCTT 60.202 41.667 0.00 0.00 0.00 2.85
109 110 3.321968 GGGCAAAGATTCAAACAACCTCT 59.678 43.478 0.00 0.00 0.00 3.69
110 111 3.069443 TGGGCAAAGATTCAAACAACCTC 59.931 43.478 0.00 0.00 0.00 3.85
111 112 3.037549 TGGGCAAAGATTCAAACAACCT 58.962 40.909 0.00 0.00 0.00 3.50
112 113 3.467374 TGGGCAAAGATTCAAACAACC 57.533 42.857 0.00 0.00 0.00 3.77
113 114 4.319694 GCAATGGGCAAAGATTCAAACAAC 60.320 41.667 0.00 0.00 43.97 3.32
114 115 3.814283 GCAATGGGCAAAGATTCAAACAA 59.186 39.130 0.00 0.00 43.97 2.83
115 116 3.401182 GCAATGGGCAAAGATTCAAACA 58.599 40.909 0.00 0.00 43.97 2.83
128 129 4.481112 CGTTCGCTGGCAATGGGC 62.481 66.667 0.00 0.00 43.74 5.36
129 130 3.814268 CCGTTCGCTGGCAATGGG 61.814 66.667 0.00 0.00 0.00 4.00
140 141 0.098025 AATAATTGGCGTGCCGTTCG 59.902 50.000 6.37 0.00 39.42 3.95
141 142 1.917303 CAAATAATTGGCGTGCCGTTC 59.083 47.619 6.37 0.00 39.42 3.95
142 143 1.989430 CAAATAATTGGCGTGCCGTT 58.011 45.000 6.37 6.49 39.42 4.44
143 144 3.712020 CAAATAATTGGCGTGCCGT 57.288 47.368 6.37 0.00 39.42 5.68
158 159 1.602323 AGCCGATTTGTCCGCCAAA 60.602 52.632 1.66 1.66 46.59 3.28
159 160 2.033448 AGCCGATTTGTCCGCCAA 59.967 55.556 0.00 0.00 0.00 4.52
160 161 2.745884 CAGCCGATTTGTCCGCCA 60.746 61.111 0.00 0.00 0.00 5.69
161 162 4.179579 GCAGCCGATTTGTCCGCC 62.180 66.667 0.00 0.00 0.00 6.13
162 163 2.690778 AAGCAGCCGATTTGTCCGC 61.691 57.895 0.00 0.00 0.00 5.54
163 164 1.135315 CAAGCAGCCGATTTGTCCG 59.865 57.895 0.00 0.00 0.00 4.79
164 165 1.153958 GCAAGCAGCCGATTTGTCC 60.154 57.895 0.00 0.00 37.23 4.02
165 166 1.512734 CGCAAGCAGCCGATTTGTC 60.513 57.895 0.00 0.00 41.38 3.18
166 167 2.562912 CGCAAGCAGCCGATTTGT 59.437 55.556 0.00 0.00 41.38 2.83
189 190 1.663695 ATCCGTAGCCAATTCGTTGG 58.336 50.000 2.87 2.87 44.82 3.77
190 191 2.791158 GCAATCCGTAGCCAATTCGTTG 60.791 50.000 0.00 0.00 0.00 4.10
191 192 1.400494 GCAATCCGTAGCCAATTCGTT 59.600 47.619 0.00 0.00 0.00 3.85
192 193 1.014352 GCAATCCGTAGCCAATTCGT 58.986 50.000 0.00 0.00 0.00 3.85
193 194 1.013596 TGCAATCCGTAGCCAATTCG 58.986 50.000 0.00 0.00 0.00 3.34
194 195 3.189287 CCTATGCAATCCGTAGCCAATTC 59.811 47.826 0.00 0.00 32.66 2.17
195 196 3.149196 CCTATGCAATCCGTAGCCAATT 58.851 45.455 0.00 0.00 32.66 2.32
196 197 2.371841 TCCTATGCAATCCGTAGCCAAT 59.628 45.455 0.00 0.00 32.66 3.16
197 198 1.765904 TCCTATGCAATCCGTAGCCAA 59.234 47.619 0.00 0.00 32.66 4.52
198 199 1.419381 TCCTATGCAATCCGTAGCCA 58.581 50.000 0.00 0.00 32.66 4.75
199 200 2.543777 TTCCTATGCAATCCGTAGCC 57.456 50.000 0.00 0.00 32.66 3.93
200 201 3.877508 AGTTTTCCTATGCAATCCGTAGC 59.122 43.478 0.00 0.00 32.66 3.58
201 202 5.006746 GTCAGTTTTCCTATGCAATCCGTAG 59.993 44.000 0.00 0.00 33.61 3.51
202 203 4.873827 GTCAGTTTTCCTATGCAATCCGTA 59.126 41.667 0.00 0.00 0.00 4.02
203 204 3.689649 GTCAGTTTTCCTATGCAATCCGT 59.310 43.478 0.00 0.00 0.00 4.69
204 205 3.941483 AGTCAGTTTTCCTATGCAATCCG 59.059 43.478 0.00 0.00 0.00 4.18
205 206 5.393461 CCAAGTCAGTTTTCCTATGCAATCC 60.393 44.000 0.00 0.00 0.00 3.01
206 207 5.415701 TCCAAGTCAGTTTTCCTATGCAATC 59.584 40.000 0.00 0.00 0.00 2.67
207 208 5.324409 TCCAAGTCAGTTTTCCTATGCAAT 58.676 37.500 0.00 0.00 0.00 3.56
208 209 4.724399 TCCAAGTCAGTTTTCCTATGCAA 58.276 39.130 0.00 0.00 0.00 4.08
209 210 4.365514 TCCAAGTCAGTTTTCCTATGCA 57.634 40.909 0.00 0.00 0.00 3.96
210 211 5.447818 CGAATCCAAGTCAGTTTTCCTATGC 60.448 44.000 0.00 0.00 0.00 3.14
211 212 5.874810 TCGAATCCAAGTCAGTTTTCCTATG 59.125 40.000 0.00 0.00 0.00 2.23
212 213 6.049955 TCGAATCCAAGTCAGTTTTCCTAT 57.950 37.500 0.00 0.00 0.00 2.57
213 214 5.477607 TCGAATCCAAGTCAGTTTTCCTA 57.522 39.130 0.00 0.00 0.00 2.94
214 215 4.319177 CTCGAATCCAAGTCAGTTTTCCT 58.681 43.478 0.00 0.00 0.00 3.36
215 216 3.120165 GCTCGAATCCAAGTCAGTTTTCC 60.120 47.826 0.00 0.00 0.00 3.13
216 217 3.423645 CGCTCGAATCCAAGTCAGTTTTC 60.424 47.826 0.00 0.00 0.00 2.29
217 218 2.480419 CGCTCGAATCCAAGTCAGTTTT 59.520 45.455 0.00 0.00 0.00 2.43
218 219 2.069273 CGCTCGAATCCAAGTCAGTTT 58.931 47.619 0.00 0.00 0.00 2.66
219 220 1.272490 TCGCTCGAATCCAAGTCAGTT 59.728 47.619 0.00 0.00 0.00 3.16
220 221 0.888619 TCGCTCGAATCCAAGTCAGT 59.111 50.000 0.00 0.00 0.00 3.41
221 222 1.554392 CTCGCTCGAATCCAAGTCAG 58.446 55.000 0.00 0.00 0.00 3.51
222 223 0.458543 GCTCGCTCGAATCCAAGTCA 60.459 55.000 0.00 0.00 0.00 3.41
223 224 1.148759 GGCTCGCTCGAATCCAAGTC 61.149 60.000 5.68 0.00 0.00 3.01
224 225 1.153549 GGCTCGCTCGAATCCAAGT 60.154 57.895 5.68 0.00 0.00 3.16
225 226 0.740868 TTGGCTCGCTCGAATCCAAG 60.741 55.000 16.38 0.00 34.30 3.61
226 227 0.321210 TTTGGCTCGCTCGAATCCAA 60.321 50.000 16.38 16.38 36.06 3.53
227 228 0.107703 ATTTGGCTCGCTCGAATCCA 60.108 50.000 8.27 8.27 0.00 3.41
228 229 1.017387 AATTTGGCTCGCTCGAATCC 58.983 50.000 0.00 0.00 0.00 3.01
229 230 3.743396 AGATAATTTGGCTCGCTCGAATC 59.257 43.478 0.00 0.00 0.00 2.52
230 231 3.496130 CAGATAATTTGGCTCGCTCGAAT 59.504 43.478 0.00 0.00 0.00 3.34
231 232 2.866156 CAGATAATTTGGCTCGCTCGAA 59.134 45.455 0.00 0.00 0.00 3.71
232 233 2.100749 TCAGATAATTTGGCTCGCTCGA 59.899 45.455 0.00 0.00 0.00 4.04
233 234 2.219674 GTCAGATAATTTGGCTCGCTCG 59.780 50.000 0.00 0.00 0.00 5.03
234 235 2.219674 CGTCAGATAATTTGGCTCGCTC 59.780 50.000 0.00 0.00 0.00 5.03
235 236 2.205074 CGTCAGATAATTTGGCTCGCT 58.795 47.619 0.00 0.00 0.00 4.93
236 237 1.333258 GCGTCAGATAATTTGGCTCGC 60.333 52.381 0.00 0.00 34.93 5.03
237 238 1.071239 CGCGTCAGATAATTTGGCTCG 60.071 52.381 0.00 0.00 0.00 5.03
238 239 2.201732 TCGCGTCAGATAATTTGGCTC 58.798 47.619 5.77 0.00 0.00 4.70
239 240 2.309528 TCGCGTCAGATAATTTGGCT 57.690 45.000 5.77 0.00 0.00 4.75
240 241 2.908634 CATCGCGTCAGATAATTTGGC 58.091 47.619 5.77 0.00 0.00 4.52
241 242 2.287644 TGCATCGCGTCAGATAATTTGG 59.712 45.455 5.77 0.00 0.00 3.28
242 243 3.001634 ACTGCATCGCGTCAGATAATTTG 59.998 43.478 24.14 4.98 34.57 2.32
243 244 3.001634 CACTGCATCGCGTCAGATAATTT 59.998 43.478 24.14 5.92 34.57 1.82
244 245 2.541346 CACTGCATCGCGTCAGATAATT 59.459 45.455 24.14 6.46 34.57 1.40
245 246 2.130395 CACTGCATCGCGTCAGATAAT 58.870 47.619 24.14 1.09 34.57 1.28
246 247 1.559831 CACTGCATCGCGTCAGATAA 58.440 50.000 24.14 0.00 34.57 1.75
247 248 0.249031 CCACTGCATCGCGTCAGATA 60.249 55.000 24.14 0.00 34.57 1.98
248 249 1.520120 CCACTGCATCGCGTCAGAT 60.520 57.895 24.14 2.81 34.57 2.90
249 250 1.948721 ATCCACTGCATCGCGTCAGA 61.949 55.000 24.14 9.49 34.57 3.27
250 251 1.520120 ATCCACTGCATCGCGTCAG 60.520 57.895 18.68 18.68 36.45 3.51
251 252 1.810853 CATCCACTGCATCGCGTCA 60.811 57.895 5.77 1.93 0.00 4.35
252 253 3.009140 CATCCACTGCATCGCGTC 58.991 61.111 5.77 0.00 0.00 5.19
261 262 3.857854 GCACGCTCGCATCCACTG 61.858 66.667 0.00 0.00 0.00 3.66
262 263 4.074526 AGCACGCTCGCATCCACT 62.075 61.111 0.00 0.00 0.00 4.00
263 264 3.857854 CAGCACGCTCGCATCCAC 61.858 66.667 0.00 0.00 0.00 4.02
266 267 1.358725 TTAACCAGCACGCTCGCATC 61.359 55.000 0.00 0.00 0.00 3.91
267 268 0.744414 ATTAACCAGCACGCTCGCAT 60.744 50.000 0.00 0.00 0.00 4.73
268 269 1.375396 ATTAACCAGCACGCTCGCA 60.375 52.632 0.00 0.00 0.00 5.10
269 270 1.060937 CATTAACCAGCACGCTCGC 59.939 57.895 0.00 0.00 0.00 5.03
270 271 1.060937 GCATTAACCAGCACGCTCG 59.939 57.895 0.00 0.00 0.00 5.03
271 272 1.305219 TGGCATTAACCAGCACGCTC 61.305 55.000 0.00 0.00 33.75 5.03
272 273 0.893270 TTGGCATTAACCAGCACGCT 60.893 50.000 0.00 0.00 41.82 5.07
273 274 0.038709 TTTGGCATTAACCAGCACGC 60.039 50.000 0.00 0.00 41.82 5.34
274 275 2.430546 TTTTGGCATTAACCAGCACG 57.569 45.000 0.00 0.00 41.82 5.34
275 276 5.451039 CAAAATTTTGGCATTAACCAGCAC 58.549 37.500 21.00 0.00 41.82 4.40
276 277 5.686159 CAAAATTTTGGCATTAACCAGCA 57.314 34.783 21.00 0.00 41.82 4.41
289 290 3.432933 CCGTCTGCCAATCCAAAATTTTG 59.567 43.478 21.65 21.65 37.90 2.44
290 291 3.663025 CCGTCTGCCAATCCAAAATTTT 58.337 40.909 0.00 0.00 0.00 1.82
291 292 2.612721 GCCGTCTGCCAATCCAAAATTT 60.613 45.455 0.00 0.00 0.00 1.82
292 293 1.066929 GCCGTCTGCCAATCCAAAATT 60.067 47.619 0.00 0.00 0.00 1.82
293 294 0.532115 GCCGTCTGCCAATCCAAAAT 59.468 50.000 0.00 0.00 0.00 1.82
294 295 0.825425 TGCCGTCTGCCAATCCAAAA 60.825 50.000 0.00 0.00 40.16 2.44
295 296 0.825425 TTGCCGTCTGCCAATCCAAA 60.825 50.000 0.00 0.00 40.16 3.28
296 297 1.228398 TTGCCGTCTGCCAATCCAA 60.228 52.632 0.00 0.00 40.16 3.53
297 298 1.971167 GTTGCCGTCTGCCAATCCA 60.971 57.895 0.00 0.00 40.16 3.41
298 299 1.971167 TGTTGCCGTCTGCCAATCC 60.971 57.895 0.00 0.00 40.16 3.01
299 300 1.210155 GTGTTGCCGTCTGCCAATC 59.790 57.895 0.00 0.00 40.16 2.67
300 301 2.616330 CGTGTTGCCGTCTGCCAAT 61.616 57.895 0.00 0.00 40.16 3.16
301 302 3.276091 CGTGTTGCCGTCTGCCAA 61.276 61.111 0.00 0.00 40.16 4.52
303 304 4.980805 TCCGTGTTGCCGTCTGCC 62.981 66.667 0.00 0.00 40.16 4.85
304 305 2.740714 GATCCGTGTTGCCGTCTGC 61.741 63.158 0.00 0.00 41.77 4.26
305 306 2.100631 GGATCCGTGTTGCCGTCTG 61.101 63.158 0.00 0.00 0.00 3.51
306 307 2.107041 TTGGATCCGTGTTGCCGTCT 62.107 55.000 7.39 0.00 0.00 4.18
307 308 1.231958 TTTGGATCCGTGTTGCCGTC 61.232 55.000 7.39 0.00 0.00 4.79
308 309 1.228003 TTTGGATCCGTGTTGCCGT 60.228 52.632 7.39 0.00 0.00 5.68
309 310 1.209127 GTTTGGATCCGTGTTGCCG 59.791 57.895 7.39 0.00 0.00 5.69
310 311 0.671251 TTGTTTGGATCCGTGTTGCC 59.329 50.000 7.39 0.00 0.00 4.52
311 312 1.930371 GCTTGTTTGGATCCGTGTTGC 60.930 52.381 7.39 3.57 0.00 4.17
312 313 1.608590 AGCTTGTTTGGATCCGTGTTG 59.391 47.619 7.39 0.00 0.00 3.33
313 314 1.880027 GAGCTTGTTTGGATCCGTGTT 59.120 47.619 7.39 0.00 0.00 3.32
314 315 1.072331 AGAGCTTGTTTGGATCCGTGT 59.928 47.619 7.39 0.00 0.00 4.49
315 316 1.813513 AGAGCTTGTTTGGATCCGTG 58.186 50.000 7.39 0.00 0.00 4.94
316 317 3.008049 ACTTAGAGCTTGTTTGGATCCGT 59.992 43.478 7.39 0.00 0.00 4.69
317 318 3.600388 ACTTAGAGCTTGTTTGGATCCG 58.400 45.455 7.39 0.00 0.00 4.18
318 319 4.572795 GCTACTTAGAGCTTGTTTGGATCC 59.427 45.833 4.20 4.20 39.50 3.36
319 320 4.572795 GGCTACTTAGAGCTTGTTTGGATC 59.427 45.833 0.00 0.00 42.43 3.36
320 321 4.518249 GGCTACTTAGAGCTTGTTTGGAT 58.482 43.478 0.00 0.00 42.43 3.41
321 322 3.307480 GGGCTACTTAGAGCTTGTTTGGA 60.307 47.826 0.00 0.00 42.43 3.53
322 323 3.010420 GGGCTACTTAGAGCTTGTTTGG 58.990 50.000 0.00 0.00 42.43 3.28
323 324 3.686726 CAGGGCTACTTAGAGCTTGTTTG 59.313 47.826 0.00 0.00 42.43 2.93
324 325 3.328050 ACAGGGCTACTTAGAGCTTGTTT 59.672 43.478 0.00 0.00 42.43 2.83
325 326 2.907042 ACAGGGCTACTTAGAGCTTGTT 59.093 45.455 0.00 0.00 42.43 2.83
326 327 2.498078 GACAGGGCTACTTAGAGCTTGT 59.502 50.000 0.00 6.02 42.43 3.16
327 328 2.497675 TGACAGGGCTACTTAGAGCTTG 59.502 50.000 0.00 0.00 42.43 4.01
328 329 2.821437 TGACAGGGCTACTTAGAGCTT 58.179 47.619 0.00 0.00 42.43 3.74
329 330 2.534042 TGACAGGGCTACTTAGAGCT 57.466 50.000 0.00 0.00 42.43 4.09
330 331 2.036604 GGATGACAGGGCTACTTAGAGC 59.963 54.545 0.00 0.00 42.05 4.09
331 332 3.300388 TGGATGACAGGGCTACTTAGAG 58.700 50.000 0.00 0.00 0.00 2.43
332 333 3.300388 CTGGATGACAGGGCTACTTAGA 58.700 50.000 0.00 0.00 43.70 2.10
333 334 3.742433 CTGGATGACAGGGCTACTTAG 57.258 52.381 0.00 0.00 43.70 2.18
344 345 3.876914 GTCTGTTGTTTCACTGGATGACA 59.123 43.478 0.00 0.00 36.92 3.58
345 346 3.876914 TGTCTGTTGTTTCACTGGATGAC 59.123 43.478 0.00 0.00 36.92 3.06
346 347 4.149511 TGTCTGTTGTTTCACTGGATGA 57.850 40.909 0.00 0.00 34.65 2.92
347 348 6.558771 TTATGTCTGTTGTTTCACTGGATG 57.441 37.500 0.00 0.00 0.00 3.51
348 349 7.285401 AGTTTTATGTCTGTTGTTTCACTGGAT 59.715 33.333 0.00 0.00 0.00 3.41
349 350 6.601613 AGTTTTATGTCTGTTGTTTCACTGGA 59.398 34.615 0.00 0.00 0.00 3.86
350 351 6.692681 CAGTTTTATGTCTGTTGTTTCACTGG 59.307 38.462 0.00 0.00 0.00 4.00
351 352 7.429340 GTCAGTTTTATGTCTGTTGTTTCACTG 59.571 37.037 0.00 0.00 33.89 3.66
352 353 7.415206 GGTCAGTTTTATGTCTGTTGTTTCACT 60.415 37.037 0.00 0.00 33.89 3.41
353 354 6.691388 GGTCAGTTTTATGTCTGTTGTTTCAC 59.309 38.462 0.00 0.00 33.89 3.18
354 355 6.601613 AGGTCAGTTTTATGTCTGTTGTTTCA 59.398 34.615 0.00 0.00 33.89 2.69
355 356 7.027778 AGGTCAGTTTTATGTCTGTTGTTTC 57.972 36.000 0.00 0.00 33.89 2.78
356 357 6.238374 CGAGGTCAGTTTTATGTCTGTTGTTT 60.238 38.462 0.00 0.00 33.89 2.83
357 358 5.236478 CGAGGTCAGTTTTATGTCTGTTGTT 59.764 40.000 0.00 0.00 33.89 2.83
358 359 4.750098 CGAGGTCAGTTTTATGTCTGTTGT 59.250 41.667 0.00 0.00 33.89 3.32
359 360 4.750098 ACGAGGTCAGTTTTATGTCTGTTG 59.250 41.667 0.00 0.00 33.89 3.33
360 361 4.957296 ACGAGGTCAGTTTTATGTCTGTT 58.043 39.130 0.00 0.00 33.89 3.16
361 362 4.602340 ACGAGGTCAGTTTTATGTCTGT 57.398 40.909 0.00 0.00 33.89 3.41
362 363 8.697846 TTATTACGAGGTCAGTTTTATGTCTG 57.302 34.615 0.00 0.00 0.00 3.51
363 364 8.529476 ACTTATTACGAGGTCAGTTTTATGTCT 58.471 33.333 0.00 0.00 0.00 3.41
364 365 8.699283 ACTTATTACGAGGTCAGTTTTATGTC 57.301 34.615 0.00 0.00 0.00 3.06
365 366 9.578439 GTACTTATTACGAGGTCAGTTTTATGT 57.422 33.333 0.00 0.00 0.00 2.29
366 367 9.577110 TGTACTTATTACGAGGTCAGTTTTATG 57.423 33.333 0.00 0.00 32.71 1.90
386 387 9.871238 AGTGTGTCGAAGAAATTATATGTACTT 57.129 29.630 0.00 0.00 39.69 2.24
390 391 9.871238 AACTAGTGTGTCGAAGAAATTATATGT 57.129 29.630 0.00 0.00 39.69 2.29
395 396 9.512435 GCTATAACTAGTGTGTCGAAGAAATTA 57.488 33.333 0.00 0.00 39.69 1.40
396 397 8.033038 TGCTATAACTAGTGTGTCGAAGAAATT 58.967 33.333 0.00 0.00 39.69 1.82
397 398 7.544622 TGCTATAACTAGTGTGTCGAAGAAAT 58.455 34.615 0.00 0.00 39.69 2.17
398 399 6.916440 TGCTATAACTAGTGTGTCGAAGAAA 58.084 36.000 0.00 0.00 39.69 2.52
399 400 6.404403 CCTGCTATAACTAGTGTGTCGAAGAA 60.404 42.308 0.00 0.00 39.69 2.52
400 401 5.066117 CCTGCTATAACTAGTGTGTCGAAGA 59.934 44.000 0.00 0.00 0.00 2.87
401 402 5.066117 TCCTGCTATAACTAGTGTGTCGAAG 59.934 44.000 0.00 0.00 0.00 3.79
402 403 4.945543 TCCTGCTATAACTAGTGTGTCGAA 59.054 41.667 0.00 0.00 0.00 3.71
403 404 4.520179 TCCTGCTATAACTAGTGTGTCGA 58.480 43.478 0.00 0.00 0.00 4.20
404 405 4.895224 TCCTGCTATAACTAGTGTGTCG 57.105 45.455 0.00 0.00 0.00 4.35
405 406 5.127356 AGGTTCCTGCTATAACTAGTGTGTC 59.873 44.000 0.00 0.00 0.00 3.67
406 407 5.024118 AGGTTCCTGCTATAACTAGTGTGT 58.976 41.667 0.00 0.00 0.00 3.72
407 408 5.452077 GGAGGTTCCTGCTATAACTAGTGTG 60.452 48.000 0.00 0.00 32.53 3.82
408 409 4.650131 GGAGGTTCCTGCTATAACTAGTGT 59.350 45.833 0.00 0.00 32.53 3.55
409 410 4.039366 GGGAGGTTCCTGCTATAACTAGTG 59.961 50.000 10.00 0.00 36.57 2.74
410 411 4.224762 GGGAGGTTCCTGCTATAACTAGT 58.775 47.826 10.00 0.00 36.57 2.57
411 412 4.223953 TGGGAGGTTCCTGCTATAACTAG 58.776 47.826 10.00 0.00 36.57 2.57
412 413 4.223953 CTGGGAGGTTCCTGCTATAACTA 58.776 47.826 10.00 0.00 36.57 2.24
413 414 3.041946 CTGGGAGGTTCCTGCTATAACT 58.958 50.000 10.00 0.00 36.57 2.24
414 415 2.772515 ACTGGGAGGTTCCTGCTATAAC 59.227 50.000 10.00 0.00 36.57 1.89
415 416 2.771943 CACTGGGAGGTTCCTGCTATAA 59.228 50.000 10.00 0.00 36.57 0.98
416 417 2.292918 ACACTGGGAGGTTCCTGCTATA 60.293 50.000 10.00 0.00 36.57 1.31
417 418 1.207791 CACTGGGAGGTTCCTGCTAT 58.792 55.000 10.00 0.00 36.57 2.97
418 419 0.178903 ACACTGGGAGGTTCCTGCTA 60.179 55.000 10.00 3.46 36.57 3.49
419 420 1.462238 ACACTGGGAGGTTCCTGCT 60.462 57.895 10.00 0.00 36.57 4.24
420 421 1.302832 CACACTGGGAGGTTCCTGC 60.303 63.158 1.66 1.66 36.57 4.85
421 422 0.035458 GTCACACTGGGAGGTTCCTG 59.965 60.000 0.00 0.00 36.57 3.86
422 423 0.399949 TGTCACACTGGGAGGTTCCT 60.400 55.000 0.00 0.00 36.57 3.36
423 424 0.693049 ATGTCACACTGGGAGGTTCC 59.307 55.000 0.00 0.00 35.23 3.62
424 425 1.347707 TCATGTCACACTGGGAGGTTC 59.652 52.381 0.00 0.00 0.00 3.62
425 426 1.434188 TCATGTCACACTGGGAGGTT 58.566 50.000 0.00 0.00 0.00 3.50
426 427 1.280133 CATCATGTCACACTGGGAGGT 59.720 52.381 0.00 0.00 0.00 3.85
427 428 1.556451 TCATCATGTCACACTGGGAGG 59.444 52.381 0.00 0.00 0.00 4.30
428 429 2.498885 TCTCATCATGTCACACTGGGAG 59.501 50.000 0.00 0.00 0.00 4.30
429 430 2.498885 CTCTCATCATGTCACACTGGGA 59.501 50.000 0.00 0.00 0.00 4.37
430 431 2.902523 CTCTCATCATGTCACACTGGG 58.097 52.381 0.00 0.00 0.00 4.45
431 432 2.277969 GCTCTCATCATGTCACACTGG 58.722 52.381 0.00 0.00 0.00 4.00
432 433 2.671888 GTGCTCTCATCATGTCACACTG 59.328 50.000 0.00 0.00 0.00 3.66
433 434 2.673326 CGTGCTCTCATCATGTCACACT 60.673 50.000 0.00 0.00 0.00 3.55
434 435 1.657594 CGTGCTCTCATCATGTCACAC 59.342 52.381 0.00 0.00 0.00 3.82
435 436 1.545582 TCGTGCTCTCATCATGTCACA 59.454 47.619 0.00 0.00 0.00 3.58
436 437 2.284263 TCGTGCTCTCATCATGTCAC 57.716 50.000 0.00 0.00 0.00 3.67
437 438 2.232208 ACTTCGTGCTCTCATCATGTCA 59.768 45.455 0.00 0.00 0.00 3.58
438 439 2.886081 ACTTCGTGCTCTCATCATGTC 58.114 47.619 0.00 0.00 0.00 3.06
439 440 3.325293 AACTTCGTGCTCTCATCATGT 57.675 42.857 0.00 0.00 0.00 3.21
440 441 5.521372 TGATTAACTTCGTGCTCTCATCATG 59.479 40.000 0.00 0.00 0.00 3.07
441 442 5.521735 GTGATTAACTTCGTGCTCTCATCAT 59.478 40.000 0.00 0.00 0.00 2.45
442 443 4.864806 GTGATTAACTTCGTGCTCTCATCA 59.135 41.667 0.00 0.00 0.00 3.07
443 444 5.105752 AGTGATTAACTTCGTGCTCTCATC 58.894 41.667 0.00 0.00 34.57 2.92
444 445 5.078411 AGTGATTAACTTCGTGCTCTCAT 57.922 39.130 0.00 0.00 34.57 2.90
445 446 4.521130 AGTGATTAACTTCGTGCTCTCA 57.479 40.909 0.00 0.00 34.57 3.27
446 447 5.642686 AGTAGTGATTAACTTCGTGCTCTC 58.357 41.667 0.00 0.00 40.56 3.20
447 448 5.646577 AGTAGTGATTAACTTCGTGCTCT 57.353 39.130 0.00 0.00 40.56 4.09
448 449 6.553524 ACTAGTAGTGATTAACTTCGTGCTC 58.446 40.000 0.85 0.00 40.56 4.26
449 450 6.512342 ACTAGTAGTGATTAACTTCGTGCT 57.488 37.500 0.85 0.00 40.56 4.40
450 451 7.115947 ACAAACTAGTAGTGATTAACTTCGTGC 59.884 37.037 2.90 0.00 40.56 5.34
451 452 8.516811 ACAAACTAGTAGTGATTAACTTCGTG 57.483 34.615 2.90 0.00 40.56 4.35
452 453 9.617975 GTACAAACTAGTAGTGATTAACTTCGT 57.382 33.333 2.90 0.00 40.56 3.85
453 454 9.837525 AGTACAAACTAGTAGTGATTAACTTCG 57.162 33.333 2.90 0.00 35.66 3.79
456 457 8.747471 GGGAGTACAAACTAGTAGTGATTAACT 58.253 37.037 2.90 4.65 38.39 2.24
457 458 8.526147 TGGGAGTACAAACTAGTAGTGATTAAC 58.474 37.037 2.90 0.00 35.56 2.01
458 459 8.654485 TGGGAGTACAAACTAGTAGTGATTAA 57.346 34.615 2.90 0.00 35.56 1.40
459 460 8.654485 TTGGGAGTACAAACTAGTAGTGATTA 57.346 34.615 2.90 0.00 35.56 1.75
460 461 7.549147 TTGGGAGTACAAACTAGTAGTGATT 57.451 36.000 2.90 0.00 35.56 2.57
461 462 7.180408 ACATTGGGAGTACAAACTAGTAGTGAT 59.820 37.037 2.90 0.00 35.56 3.06
462 463 6.495872 ACATTGGGAGTACAAACTAGTAGTGA 59.504 38.462 2.90 0.00 35.56 3.41
463 464 6.590292 CACATTGGGAGTACAAACTAGTAGTG 59.410 42.308 2.90 7.80 35.56 2.74
464 465 6.495872 TCACATTGGGAGTACAAACTAGTAGT 59.504 38.462 0.00 0.00 35.56 2.73
465 466 6.931838 TCACATTGGGAGTACAAACTAGTAG 58.068 40.000 0.00 0.00 35.56 2.57
466 467 6.921486 TCACATTGGGAGTACAAACTAGTA 57.079 37.500 0.00 0.00 35.56 1.82
467 468 5.818678 TCACATTGGGAGTACAAACTAGT 57.181 39.130 0.00 0.00 35.56 2.57
468 469 6.644347 AGATCACATTGGGAGTACAAACTAG 58.356 40.000 0.00 0.00 35.56 2.57
469 470 6.620877 AGATCACATTGGGAGTACAAACTA 57.379 37.500 0.00 0.00 35.56 2.24
470 471 5.505181 AGATCACATTGGGAGTACAAACT 57.495 39.130 0.00 0.00 39.21 2.66
471 472 7.552687 TCAATAGATCACATTGGGAGTACAAAC 59.447 37.037 15.93 0.00 34.73 2.93
472 473 7.629157 TCAATAGATCACATTGGGAGTACAAA 58.371 34.615 15.93 0.00 34.73 2.83
473 474 7.194112 TCAATAGATCACATTGGGAGTACAA 57.806 36.000 15.93 0.00 34.73 2.41
474 475 6.806668 TCAATAGATCACATTGGGAGTACA 57.193 37.500 15.93 0.00 34.73 2.90
475 476 7.500992 TCTTCAATAGATCACATTGGGAGTAC 58.499 38.462 15.93 0.00 34.73 2.73
476 477 7.675161 TCTTCAATAGATCACATTGGGAGTA 57.325 36.000 15.93 0.00 34.73 2.59
477 478 6.566079 TCTTCAATAGATCACATTGGGAGT 57.434 37.500 15.93 0.00 34.73 3.85
478 479 8.997323 GTATTCTTCAATAGATCACATTGGGAG 58.003 37.037 15.93 14.13 34.73 4.30
479 480 7.657354 CGTATTCTTCAATAGATCACATTGGGA 59.343 37.037 15.93 12.60 34.73 4.37
480 481 7.571983 GCGTATTCTTCAATAGATCACATTGGG 60.572 40.741 15.93 11.15 34.73 4.12
481 482 7.293745 GCGTATTCTTCAATAGATCACATTGG 58.706 38.462 15.93 5.57 34.73 3.16
482 483 7.041848 TGGCGTATTCTTCAATAGATCACATTG 60.042 37.037 11.82 11.82 35.19 2.82
483 484 6.992123 TGGCGTATTCTTCAATAGATCACATT 59.008 34.615 0.00 0.00 31.54 2.71
484 485 6.524734 TGGCGTATTCTTCAATAGATCACAT 58.475 36.000 0.00 0.00 31.54 3.21
485 486 5.912892 TGGCGTATTCTTCAATAGATCACA 58.087 37.500 0.00 0.00 31.54 3.58
486 487 6.619446 GCATGGCGTATTCTTCAATAGATCAC 60.619 42.308 0.00 0.00 31.54 3.06
487 488 5.409520 GCATGGCGTATTCTTCAATAGATCA 59.590 40.000 0.00 0.00 31.54 2.92
488 489 5.409520 TGCATGGCGTATTCTTCAATAGATC 59.590 40.000 0.00 0.00 31.54 2.75
489 490 5.308014 TGCATGGCGTATTCTTCAATAGAT 58.692 37.500 0.00 0.00 31.54 1.98
490 491 4.702831 TGCATGGCGTATTCTTCAATAGA 58.297 39.130 0.00 0.00 0.00 1.98
491 492 5.049198 ACATGCATGGCGTATTCTTCAATAG 60.049 40.000 29.41 0.00 0.00 1.73
492 493 4.821260 ACATGCATGGCGTATTCTTCAATA 59.179 37.500 29.41 0.00 0.00 1.90
493 494 3.633525 ACATGCATGGCGTATTCTTCAAT 59.366 39.130 29.41 1.17 0.00 2.57
528 529 8.864024 GGCTGATTTTGAACTTCTTAATTTAGC 58.136 33.333 0.00 0.00 0.00 3.09
530 531 8.865090 TGGGCTGATTTTGAACTTCTTAATTTA 58.135 29.630 0.00 0.00 0.00 1.40
568 569 4.446371 CCGGCTGAGATTAGAAGAACAAT 58.554 43.478 0.00 0.00 0.00 2.71
586 587 4.990553 GGAGATAAGGGCGCCGGC 62.991 72.222 22.54 19.07 38.90 6.13
598 599 6.537355 TGAAGATGACAACAAAGAAGGAGAT 58.463 36.000 0.00 0.00 0.00 2.75
608 609 9.065798 TCATATCAAAACTGAAGATGACAACAA 57.934 29.630 0.00 0.00 0.00 2.83
626 627 8.729756 ACGAGTTCATTGAAATGTTCATATCAA 58.270 29.630 3.76 0.00 39.84 2.57
678 679 6.555315 GCGGAGAAAAATGATACACAAAGAT 58.445 36.000 0.00 0.00 0.00 2.40
692 693 2.107950 ATGATGGACGCGGAGAAAAA 57.892 45.000 12.47 0.00 0.00 1.94
696 697 0.038251 GCATATGATGGACGCGGAGA 60.038 55.000 12.47 0.00 0.00 3.71
715 716 3.821421 AGCTTTCGGTCACTTATAGGG 57.179 47.619 0.00 0.00 0.00 3.53
716 717 6.103997 TGTTAAGCTTTCGGTCACTTATAGG 58.896 40.000 3.20 0.00 0.00 2.57
718 719 7.966246 TTTGTTAAGCTTTCGGTCACTTATA 57.034 32.000 3.20 0.00 0.00 0.98
778 780 2.979676 CAAGTGCCAAGCAGCGGA 60.980 61.111 0.00 0.00 40.08 5.54
916 961 0.886490 GTTGGTGCTGAGGTGTCTGG 60.886 60.000 0.00 0.00 0.00 3.86
925 970 0.537143 AGGATTTGCGTTGGTGCTGA 60.537 50.000 0.00 0.00 35.36 4.26
941 990 0.322636 GACGGAGAGAGTGGTGAGGA 60.323 60.000 0.00 0.00 0.00 3.71
1404 1478 3.318275 TGGATCTACAGCGGAATCTGTAC 59.682 47.826 0.00 0.00 44.77 2.90
1456 1530 5.316987 GAGATTCTCAAAGGACCCAAAGAA 58.683 41.667 8.84 0.00 0.00 2.52
1589 1667 3.273434 GGTTGACTGATGCATAGCTTGA 58.727 45.455 0.00 0.00 0.00 3.02
2168 2281 5.106038 ACAACCAGCAGACAATTACATCATG 60.106 40.000 0.00 0.00 0.00 3.07
2182 2463 1.893808 AACAGCGGACAACCAGCAG 60.894 57.895 0.00 0.00 37.85 4.24
2237 2518 8.423349 GGGATCAAATTATCAATTCCATCACAA 58.577 33.333 0.00 0.00 29.20 3.33
2316 2597 7.226918 ACATGAATGAGCATGAGAAGTTCATAG 59.773 37.037 10.93 3.87 46.64 2.23
2331 2619 7.698836 AAGTGTGTTTAAAACATGAATGAGC 57.301 32.000 0.00 0.00 44.35 4.26
2724 3112 9.005777 GTCCCATAATGTAACTAGTGTCAAAAA 57.994 33.333 0.00 0.00 0.00 1.94
2726 3114 6.814644 CGTCCCATAATGTAACTAGTGTCAAA 59.185 38.462 0.00 0.00 0.00 2.69
2728 3116 5.163488 CCGTCCCATAATGTAACTAGTGTCA 60.163 44.000 0.00 0.00 0.00 3.58
2729 3117 5.068198 TCCGTCCCATAATGTAACTAGTGTC 59.932 44.000 0.00 0.00 0.00 3.67
2731 3119 5.509163 CCTCCGTCCCATAATGTAACTAGTG 60.509 48.000 0.00 0.00 0.00 2.74
2733 3121 4.021368 CCCTCCGTCCCATAATGTAACTAG 60.021 50.000 0.00 0.00 0.00 2.57
2734 3122 3.899360 CCCTCCGTCCCATAATGTAACTA 59.101 47.826 0.00 0.00 0.00 2.24
2735 3123 2.704065 CCCTCCGTCCCATAATGTAACT 59.296 50.000 0.00 0.00 0.00 2.24
2834 3224 5.111293 GTTTCCAATATGACCAATGGCTTG 58.889 41.667 0.00 0.00 32.87 4.01
2835 3225 4.776837 TGTTTCCAATATGACCAATGGCTT 59.223 37.500 0.00 0.00 32.87 4.35
2896 3286 9.409312 CTCTCTTTAGCAGATAATCTGTACATG 57.591 37.037 0.00 0.00 45.94 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.