Multiple sequence alignment - TraesCS6D01G021200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G021200 chr6D 100.000 3525 0 0 1 3525 8387666 8384142 0.000000e+00 6510
1 TraesCS6D01G021200 chr6D 90.160 1626 138 7 1101 2704 8348912 8347287 0.000000e+00 2097
2 TraesCS6D01G021200 chr6D 85.257 1594 212 13 950 2537 8316742 8315166 0.000000e+00 1620
3 TraesCS6D01G021200 chr6D 84.189 487 70 6 1105 1586 420569130 420568646 1.920000e-127 466
4 TraesCS6D01G021200 chr6D 83.568 426 68 2 184 609 379756998 379757421 7.090000e-107 398
5 TraesCS6D01G021200 chr6D 95.676 185 8 0 1 185 88092557 88092373 7.400000e-77 298
6 TraesCS6D01G021200 chr6A 91.128 2536 167 21 184 2708 8793606 8791118 0.000000e+00 3384
7 TraesCS6D01G021200 chr6A 88.626 1688 152 21 1103 2777 8869041 8867381 0.000000e+00 2017
8 TraesCS6D01G021200 chr6A 85.132 1594 214 13 950 2537 8755159 8753583 0.000000e+00 1609
9 TraesCS6D01G021200 chr6A 86.154 195 16 5 956 1150 8968503 8968320 2.150000e-47 200
10 TraesCS6D01G021200 chr6B 91.074 1658 90 23 863 2518 16240706 16242307 0.000000e+00 2189
11 TraesCS6D01G021200 chr6B 84.369 1094 156 12 1506 2591 16246893 16247979 0.000000e+00 1059
12 TraesCS6D01G021200 chr6B 89.402 585 57 5 184 767 16240123 16240703 0.000000e+00 732
13 TraesCS6D01G021200 chr6B 83.984 487 71 6 1105 1586 633730705 633731189 8.920000e-126 460
14 TraesCS6D01G021200 chr6B 96.283 269 10 0 3257 3525 16242708 16242976 3.230000e-120 442
15 TraesCS6D01G021200 chr6B 90.379 343 14 9 2748 3078 16242363 16242698 1.940000e-117 433
16 TraesCS6D01G021200 chr4D 87.872 1443 148 15 1075 2502 477911940 477913370 0.000000e+00 1670
17 TraesCS6D01G021200 chr4B 87.275 1446 160 11 1075 2505 604139303 604140739 0.000000e+00 1629
18 TraesCS6D01G021200 chr5A 86.403 809 105 3 1707 2514 680709641 680710445 0.000000e+00 880
19 TraesCS6D01G021200 chr5A 88.590 631 69 1 1075 1705 680708645 680709272 0.000000e+00 763
20 TraesCS6D01G021200 chr1B 88.889 648 59 9 184 831 630681663 630682297 0.000000e+00 785
21 TraesCS6D01G021200 chr1B 93.514 185 12 0 1 185 553904493 553904309 3.470000e-70 276
22 TraesCS6D01G021200 chr1B 93.478 184 12 0 1 184 9917531 9917348 1.250000e-69 274
23 TraesCS6D01G021200 chr1B 94.595 74 2 2 893 965 630682307 630682379 2.880000e-21 113
24 TraesCS6D01G021200 chr3D 83.918 342 54 1 341 682 447017079 447016739 3.390000e-85 326
25 TraesCS6D01G021200 chr7B 78.870 478 101 0 186 663 512681846 512682323 1.220000e-84 324
26 TraesCS6D01G021200 chr7B 92.513 187 8 5 1 186 733407847 733407666 2.700000e-66 263
27 TraesCS6D01G021200 chr1D 96.721 183 6 0 1 183 443221905 443221723 4.420000e-79 305
28 TraesCS6D01G021200 chr7A 94.536 183 6 2 1 183 16127354 16127176 2.680000e-71 279
29 TraesCS6D01G021200 chr3B 93.989 183 7 2 1 183 772987579 772987401 1.250000e-69 274
30 TraesCS6D01G021200 chr1A 93.514 185 10 1 1 183 575822263 575822447 1.250000e-69 274
31 TraesCS6D01G021200 chr5B 92.896 183 13 0 1 183 693965157 693965339 2.090000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G021200 chr6D 8384142 8387666 3524 True 6510.0 6510 100.0000 1 3525 1 chr6D.!!$R3 3524
1 TraesCS6D01G021200 chr6D 8347287 8348912 1625 True 2097.0 2097 90.1600 1101 2704 1 chr6D.!!$R2 1603
2 TraesCS6D01G021200 chr6D 8315166 8316742 1576 True 1620.0 1620 85.2570 950 2537 1 chr6D.!!$R1 1587
3 TraesCS6D01G021200 chr6A 8791118 8793606 2488 True 3384.0 3384 91.1280 184 2708 1 chr6A.!!$R2 2524
4 TraesCS6D01G021200 chr6A 8867381 8869041 1660 True 2017.0 2017 88.6260 1103 2777 1 chr6A.!!$R3 1674
5 TraesCS6D01G021200 chr6A 8753583 8755159 1576 True 1609.0 1609 85.1320 950 2537 1 chr6A.!!$R1 1587
6 TraesCS6D01G021200 chr6B 16240123 16247979 7856 False 971.0 2189 90.3014 184 3525 5 chr6B.!!$F2 3341
7 TraesCS6D01G021200 chr4D 477911940 477913370 1430 False 1670.0 1670 87.8720 1075 2502 1 chr4D.!!$F1 1427
8 TraesCS6D01G021200 chr4B 604139303 604140739 1436 False 1629.0 1629 87.2750 1075 2505 1 chr4B.!!$F1 1430
9 TraesCS6D01G021200 chr5A 680708645 680710445 1800 False 821.5 880 87.4965 1075 2514 2 chr5A.!!$F1 1439
10 TraesCS6D01G021200 chr1B 630681663 630682379 716 False 449.0 785 91.7420 184 965 2 chr1B.!!$F1 781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.250901 AGGTGTGTCATGCAGTTCCC 60.251 55.0 0.0 0.0 0.00 3.97 F
1005 1016 0.386476 CATGCCAAGCCAACGCATAT 59.614 50.0 0.0 0.0 41.18 1.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1018 1029 1.027357 AGTGTTCTTGTTGCTGCTGG 58.973 50.0 0.0 0.0 0.0 4.85 R
2720 3196 0.252197 GGGAAGTAACGAGCCACCAT 59.748 55.0 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.861065 TCTTAACTTGCTTTGTACTTCAGG 57.139 37.500 0.00 0.00 0.00 3.86
24 25 3.990318 AACTTGCTTTGTACTTCAGGC 57.010 42.857 0.00 0.00 0.00 4.85
25 26 2.230660 ACTTGCTTTGTACTTCAGGCC 58.769 47.619 0.00 0.00 0.00 5.19
26 27 2.229792 CTTGCTTTGTACTTCAGGCCA 58.770 47.619 5.01 0.00 0.00 5.36
27 28 2.584835 TGCTTTGTACTTCAGGCCAT 57.415 45.000 5.01 0.00 0.00 4.40
28 29 3.712016 TGCTTTGTACTTCAGGCCATA 57.288 42.857 5.01 0.00 0.00 2.74
29 30 3.609853 TGCTTTGTACTTCAGGCCATAG 58.390 45.455 5.01 0.65 0.00 2.23
30 31 3.009033 TGCTTTGTACTTCAGGCCATAGT 59.991 43.478 5.01 7.63 0.00 2.12
31 32 4.010349 GCTTTGTACTTCAGGCCATAGTT 58.990 43.478 5.01 0.00 0.00 2.24
32 33 5.183228 GCTTTGTACTTCAGGCCATAGTTA 58.817 41.667 5.01 0.00 0.00 2.24
33 34 5.646360 GCTTTGTACTTCAGGCCATAGTTAA 59.354 40.000 5.01 1.86 0.00 2.01
34 35 6.183360 GCTTTGTACTTCAGGCCATAGTTAAG 60.183 42.308 5.01 10.13 0.00 1.85
35 36 6.614694 TTGTACTTCAGGCCATAGTTAAGA 57.385 37.500 5.01 0.00 0.00 2.10
36 37 6.808321 TGTACTTCAGGCCATAGTTAAGAT 57.192 37.500 5.01 0.00 0.00 2.40
37 38 7.195374 TGTACTTCAGGCCATAGTTAAGATT 57.805 36.000 5.01 0.00 0.00 2.40
38 39 7.047891 TGTACTTCAGGCCATAGTTAAGATTG 58.952 38.462 5.01 0.00 0.00 2.67
39 40 6.313519 ACTTCAGGCCATAGTTAAGATTGA 57.686 37.500 5.01 0.00 0.00 2.57
40 41 6.352516 ACTTCAGGCCATAGTTAAGATTGAG 58.647 40.000 5.01 0.00 0.00 3.02
41 42 5.296151 TCAGGCCATAGTTAAGATTGAGG 57.704 43.478 5.01 0.00 0.00 3.86
42 43 4.103153 TCAGGCCATAGTTAAGATTGAGGG 59.897 45.833 5.01 0.00 0.00 4.30
43 44 4.103153 CAGGCCATAGTTAAGATTGAGGGA 59.897 45.833 5.01 0.00 0.00 4.20
44 45 4.349342 AGGCCATAGTTAAGATTGAGGGAG 59.651 45.833 5.01 0.00 0.00 4.30
45 46 4.505742 GGCCATAGTTAAGATTGAGGGAGG 60.506 50.000 0.00 0.00 0.00 4.30
46 47 4.505742 GCCATAGTTAAGATTGAGGGAGGG 60.506 50.000 0.00 0.00 0.00 4.30
47 48 4.660771 CCATAGTTAAGATTGAGGGAGGGT 59.339 45.833 0.00 0.00 0.00 4.34
48 49 5.455326 CCATAGTTAAGATTGAGGGAGGGTG 60.455 48.000 0.00 0.00 0.00 4.61
49 50 3.532102 AGTTAAGATTGAGGGAGGGTGT 58.468 45.455 0.00 0.00 0.00 4.16
50 51 3.916989 AGTTAAGATTGAGGGAGGGTGTT 59.083 43.478 0.00 0.00 0.00 3.32
51 52 5.098663 AGTTAAGATTGAGGGAGGGTGTTA 58.901 41.667 0.00 0.00 0.00 2.41
52 53 5.189934 AGTTAAGATTGAGGGAGGGTGTTAG 59.810 44.000 0.00 0.00 0.00 2.34
53 54 3.491766 AGATTGAGGGAGGGTGTTAGA 57.508 47.619 0.00 0.00 0.00 2.10
54 55 3.108376 AGATTGAGGGAGGGTGTTAGAC 58.892 50.000 0.00 0.00 0.00 2.59
55 56 2.715763 TTGAGGGAGGGTGTTAGACT 57.284 50.000 0.00 0.00 0.00 3.24
56 57 1.938585 TGAGGGAGGGTGTTAGACTG 58.061 55.000 0.00 0.00 0.00 3.51
57 58 1.149288 TGAGGGAGGGTGTTAGACTGT 59.851 52.381 0.00 0.00 0.00 3.55
58 59 2.380932 TGAGGGAGGGTGTTAGACTGTA 59.619 50.000 0.00 0.00 0.00 2.74
59 60 3.012502 TGAGGGAGGGTGTTAGACTGTAT 59.987 47.826 0.00 0.00 0.00 2.29
60 61 4.231195 TGAGGGAGGGTGTTAGACTGTATA 59.769 45.833 0.00 0.00 0.00 1.47
61 62 5.103215 TGAGGGAGGGTGTTAGACTGTATAT 60.103 44.000 0.00 0.00 0.00 0.86
62 63 6.103649 TGAGGGAGGGTGTTAGACTGTATATA 59.896 42.308 0.00 0.00 0.00 0.86
63 64 6.313324 AGGGAGGGTGTTAGACTGTATATAC 58.687 44.000 5.89 5.89 0.00 1.47
64 65 6.073314 GGGAGGGTGTTAGACTGTATATACA 58.927 44.000 14.75 14.75 34.56 2.29
65 66 6.724905 GGGAGGGTGTTAGACTGTATATACAT 59.275 42.308 15.81 6.75 35.36 2.29
66 67 7.892241 GGGAGGGTGTTAGACTGTATATACATA 59.108 40.741 15.81 3.54 35.36 2.29
67 68 8.958506 GGAGGGTGTTAGACTGTATATACATAG 58.041 40.741 15.81 8.13 35.36 2.23
68 69 8.350852 AGGGTGTTAGACTGTATATACATAGC 57.649 38.462 15.81 8.54 35.36 2.97
69 70 7.396623 AGGGTGTTAGACTGTATATACATAGCC 59.603 40.741 15.81 9.98 35.36 3.93
70 71 7.396623 GGGTGTTAGACTGTATATACATAGCCT 59.603 40.741 15.81 12.06 35.36 4.58
71 72 8.460428 GGTGTTAGACTGTATATACATAGCCTC 58.540 40.741 15.81 6.35 35.36 4.70
72 73 9.233649 GTGTTAGACTGTATATACATAGCCTCT 57.766 37.037 15.81 12.13 35.36 3.69
73 74 9.232473 TGTTAGACTGTATATACATAGCCTCTG 57.768 37.037 15.81 4.72 35.36 3.35
74 75 9.233649 GTTAGACTGTATATACATAGCCTCTGT 57.766 37.037 15.81 7.78 35.36 3.41
76 77 8.795842 AGACTGTATATACATAGCCTCTGTAC 57.204 38.462 15.81 3.55 35.36 2.90
77 78 8.383947 AGACTGTATATACATAGCCTCTGTACA 58.616 37.037 15.81 0.00 35.36 2.90
78 79 8.568676 ACTGTATATACATAGCCTCTGTACAG 57.431 38.462 17.17 17.17 36.35 2.74
79 80 8.383947 ACTGTATATACATAGCCTCTGTACAGA 58.616 37.037 23.80 23.80 34.97 3.41
80 81 9.402320 CTGTATATACATAGCCTCTGTACAGAT 57.598 37.037 25.35 13.79 33.99 2.90
87 88 8.657387 ACATAGCCTCTGTACAGATATATTGT 57.343 34.615 25.35 20.86 36.76 2.71
88 89 9.755122 ACATAGCCTCTGTACAGATATATTGTA 57.245 33.333 25.35 10.79 36.76 2.41
91 92 8.478775 AGCCTCTGTACAGATATATTGTAACA 57.521 34.615 25.35 0.00 36.76 2.41
92 93 9.094578 AGCCTCTGTACAGATATATTGTAACAT 57.905 33.333 25.35 0.00 36.76 2.71
93 94 9.712305 GCCTCTGTACAGATATATTGTAACATT 57.288 33.333 25.35 0.00 36.76 2.71
107 108 9.930158 ATATTGTAACATTGTATTGTACCCCTT 57.070 29.630 0.00 0.00 0.00 3.95
108 109 7.455641 TTGTAACATTGTATTGTACCCCTTG 57.544 36.000 0.00 0.00 0.00 3.61
109 110 5.946972 TGTAACATTGTATTGTACCCCTTGG 59.053 40.000 0.00 0.00 37.80 3.61
134 135 8.998277 GGTACCTCTATATAATGAGATAGCCA 57.002 38.462 4.06 0.00 32.44 4.75
135 136 8.852135 GGTACCTCTATATAATGAGATAGCCAC 58.148 40.741 4.06 0.00 32.44 5.01
136 137 9.409918 GTACCTCTATATAATGAGATAGCCACA 57.590 37.037 6.85 0.00 32.44 4.17
137 138 8.299990 ACCTCTATATAATGAGATAGCCACAC 57.700 38.462 6.85 0.00 32.44 3.82
138 139 7.343316 ACCTCTATATAATGAGATAGCCACACC 59.657 40.741 6.85 0.00 32.44 4.16
139 140 7.201956 CCTCTATATAATGAGATAGCCACACCC 60.202 44.444 6.85 0.00 32.44 4.61
140 141 5.700402 ATATAATGAGATAGCCACACCCC 57.300 43.478 0.00 0.00 0.00 4.95
141 142 0.469917 AATGAGATAGCCACACCCCG 59.530 55.000 0.00 0.00 0.00 5.73
142 143 1.410850 ATGAGATAGCCACACCCCGG 61.411 60.000 0.00 0.00 0.00 5.73
143 144 2.040606 AGATAGCCACACCCCGGT 59.959 61.111 0.00 0.00 0.00 5.28
144 145 1.615424 AGATAGCCACACCCCGGTT 60.615 57.895 0.00 0.00 0.00 4.44
145 146 1.205460 AGATAGCCACACCCCGGTTT 61.205 55.000 0.00 0.00 0.00 3.27
146 147 0.542805 GATAGCCACACCCCGGTTTA 59.457 55.000 0.00 0.00 0.00 2.01
147 148 0.544697 ATAGCCACACCCCGGTTTAG 59.455 55.000 0.00 0.00 0.00 1.85
148 149 1.555477 TAGCCACACCCCGGTTTAGG 61.555 60.000 0.00 0.00 0.00 2.69
149 150 3.163503 CCACACCCCGGTTTAGGT 58.836 61.111 0.00 0.00 36.58 3.08
152 153 4.390048 CACCCCGGTTTAGGTGTG 57.610 61.111 16.95 2.28 46.99 3.82
153 154 1.452801 CACCCCGGTTTAGGTGTGT 59.547 57.895 16.95 0.00 46.99 3.72
154 155 0.604511 CACCCCGGTTTAGGTGTGTC 60.605 60.000 16.95 0.00 46.99 3.67
155 156 1.055551 ACCCCGGTTTAGGTGTGTCA 61.056 55.000 0.00 0.00 34.20 3.58
156 157 0.326927 CCCCGGTTTAGGTGTGTCAT 59.673 55.000 0.00 0.00 0.00 3.06
157 158 1.448985 CCCGGTTTAGGTGTGTCATG 58.551 55.000 0.00 0.00 0.00 3.07
158 159 0.802494 CCGGTTTAGGTGTGTCATGC 59.198 55.000 0.00 0.00 0.00 4.06
159 160 1.518325 CGGTTTAGGTGTGTCATGCA 58.482 50.000 0.00 0.00 0.00 3.96
160 161 1.464608 CGGTTTAGGTGTGTCATGCAG 59.535 52.381 0.00 0.00 0.00 4.41
161 162 2.504367 GGTTTAGGTGTGTCATGCAGT 58.496 47.619 0.00 0.00 0.00 4.40
162 163 2.884639 GGTTTAGGTGTGTCATGCAGTT 59.115 45.455 0.00 0.00 0.00 3.16
163 164 3.058224 GGTTTAGGTGTGTCATGCAGTTC 60.058 47.826 0.00 0.00 0.00 3.01
164 165 2.472695 TAGGTGTGTCATGCAGTTCC 57.527 50.000 0.00 0.00 0.00 3.62
165 166 0.250901 AGGTGTGTCATGCAGTTCCC 60.251 55.000 0.00 0.00 0.00 3.97
166 167 0.537143 GGTGTGTCATGCAGTTCCCA 60.537 55.000 0.00 0.00 0.00 4.37
167 168 1.317613 GTGTGTCATGCAGTTCCCAA 58.682 50.000 0.00 0.00 0.00 4.12
168 169 1.680735 GTGTGTCATGCAGTTCCCAAA 59.319 47.619 0.00 0.00 0.00 3.28
169 170 2.297033 GTGTGTCATGCAGTTCCCAAAT 59.703 45.455 0.00 0.00 0.00 2.32
170 171 2.557924 TGTGTCATGCAGTTCCCAAATC 59.442 45.455 0.00 0.00 0.00 2.17
171 172 2.557924 GTGTCATGCAGTTCCCAAATCA 59.442 45.455 0.00 0.00 0.00 2.57
172 173 3.194116 GTGTCATGCAGTTCCCAAATCAT 59.806 43.478 0.00 0.00 0.00 2.45
173 174 4.398988 GTGTCATGCAGTTCCCAAATCATA 59.601 41.667 0.00 0.00 0.00 2.15
174 175 5.068198 GTGTCATGCAGTTCCCAAATCATAT 59.932 40.000 0.00 0.00 0.00 1.78
175 176 5.068067 TGTCATGCAGTTCCCAAATCATATG 59.932 40.000 0.00 0.00 0.00 1.78
176 177 5.068198 GTCATGCAGTTCCCAAATCATATGT 59.932 40.000 1.90 0.00 0.00 2.29
177 178 5.300034 TCATGCAGTTCCCAAATCATATGTC 59.700 40.000 1.90 0.00 0.00 3.06
178 179 4.858850 TGCAGTTCCCAAATCATATGTCT 58.141 39.130 1.90 0.00 0.00 3.41
179 180 5.263599 TGCAGTTCCCAAATCATATGTCTT 58.736 37.500 1.90 0.00 0.00 3.01
180 181 6.422333 TGCAGTTCCCAAATCATATGTCTTA 58.578 36.000 1.90 0.00 0.00 2.10
181 182 6.318648 TGCAGTTCCCAAATCATATGTCTTAC 59.681 38.462 1.90 0.00 0.00 2.34
182 183 6.318648 GCAGTTCCCAAATCATATGTCTTACA 59.681 38.462 1.90 0.00 0.00 2.41
332 333 1.608717 GACCCGATCCAGCACACTCT 61.609 60.000 0.00 0.00 0.00 3.24
375 376 1.771255 GATCCATGTGAACCTAGCCCT 59.229 52.381 0.00 0.00 0.00 5.19
383 384 1.188863 GAACCTAGCCCTTACACGGA 58.811 55.000 0.00 0.00 0.00 4.69
389 390 2.154567 AGCCCTTACACGGACTATCA 57.845 50.000 0.00 0.00 0.00 2.15
497 498 3.010808 ACGGATAAGGTTGAAATCCCCAA 59.989 43.478 0.00 0.00 36.59 4.12
550 551 3.511146 CCTTATCTTTCAGCTTGGCCAAA 59.489 43.478 20.91 0.59 0.00 3.28
558 559 0.755327 AGCTTGGCCAAAAAGTCCGT 60.755 50.000 20.91 0.00 0.00 4.69
586 587 1.598130 GTGATCAGCCGGGCCATAC 60.598 63.158 17.02 6.17 0.00 2.39
588 589 1.148273 GATCAGCCGGGCCATACAA 59.852 57.895 17.02 0.00 0.00 2.41
604 605 2.214376 ACAAAATGATCGCCTCCCAA 57.786 45.000 0.00 0.00 0.00 4.12
650 651 6.017357 GGTAATGGACATACCGAGGAAAAATC 60.017 42.308 0.00 0.00 42.61 2.17
667 668 0.614979 ATCCCCCTCGGTCCATATCG 60.615 60.000 0.00 0.00 0.00 2.92
673 674 1.029681 CTCGGTCCATATCGTCCACA 58.970 55.000 0.00 0.00 0.00 4.17
689 690 4.636648 CGTCCACAGAGATAGAGTAGTGTT 59.363 45.833 0.00 0.00 0.00 3.32
690 691 5.447954 CGTCCACAGAGATAGAGTAGTGTTG 60.448 48.000 0.00 0.00 0.00 3.33
710 711 5.390613 GTTGAAAACGTCTTACATCATGGG 58.609 41.667 0.00 0.00 36.92 4.00
722 726 9.469097 GTCTTACATCATGGGATAGAGTAGTAT 57.531 37.037 0.00 0.00 30.87 2.12
871 875 0.882927 ACAACACGTCCCAATCGGTG 60.883 55.000 0.00 0.00 0.00 4.94
945 949 2.356135 GTCAGTATGTTTGCCCATCGT 58.644 47.619 0.00 0.00 37.40 3.73
948 952 3.449377 TCAGTATGTTTGCCCATCGTCTA 59.551 43.478 0.00 0.00 37.40 2.59
950 954 2.779755 ATGTTTGCCCATCGTCTACA 57.220 45.000 0.00 0.00 0.00 2.74
951 955 1.803334 TGTTTGCCCATCGTCTACAC 58.197 50.000 0.00 0.00 0.00 2.90
953 957 0.981183 TTTGCCCATCGTCTACACCT 59.019 50.000 0.00 0.00 0.00 4.00
1005 1016 0.386476 CATGCCAAGCCAACGCATAT 59.614 50.000 0.00 0.00 41.18 1.78
1018 1029 4.568359 CCAACGCATATATAGCATCCTCAC 59.432 45.833 7.58 0.00 0.00 3.51
1049 1060 0.818296 AGAACACTAGCTACTGGCCG 59.182 55.000 0.00 0.00 43.05 6.13
1089 1100 1.654023 CGCCGGAAATGGGTTCTTCC 61.654 60.000 5.05 0.00 38.20 3.46
1595 1628 4.147449 TGGCCTCGCACCGATCAG 62.147 66.667 3.32 0.00 34.61 2.90
2277 2702 1.003839 ATTCTTCGCGGACCAGCAA 60.004 52.632 6.13 0.00 36.85 3.91
2531 2998 5.010213 GCCGCCATGGGTAAAGAAATAATAA 59.990 40.000 15.13 0.00 38.63 1.40
2555 3026 8.606040 AATGTACGTACCTGCTTTAAGTTTTA 57.394 30.769 22.43 0.00 0.00 1.52
2560 3031 8.791355 ACGTACCTGCTTTAAGTTTTATTTTG 57.209 30.769 0.00 0.00 0.00 2.44
2563 3034 5.995282 ACCTGCTTTAAGTTTTATTTTGCCC 59.005 36.000 0.00 0.00 0.00 5.36
2627 3102 3.945285 CAGTAATCCCAGCAAATTACCGT 59.055 43.478 0.00 0.00 38.53 4.83
2635 3110 4.439563 CCCAGCAAATTACCGTCCAATAAC 60.440 45.833 0.00 0.00 0.00 1.89
2637 3112 5.331902 CAGCAAATTACCGTCCAATAACAG 58.668 41.667 0.00 0.00 0.00 3.16
2650 3125 9.528018 CCGTCCAATAACAGCAAATATATTTTT 57.472 29.630 8.01 3.45 0.00 1.94
2704 3180 2.894126 TGACCCGTGGTTTTGCAATTAT 59.106 40.909 0.00 0.00 35.25 1.28
2705 3181 4.079970 TGACCCGTGGTTTTGCAATTATA 58.920 39.130 0.00 0.00 35.25 0.98
2706 3182 4.156922 TGACCCGTGGTTTTGCAATTATAG 59.843 41.667 0.00 0.00 35.25 1.31
2707 3183 4.083565 ACCCGTGGTTTTGCAATTATAGT 58.916 39.130 0.00 0.00 27.29 2.12
2708 3184 5.254901 ACCCGTGGTTTTGCAATTATAGTA 58.745 37.500 0.00 0.00 27.29 1.82
2710 3186 5.355910 CCCGTGGTTTTGCAATTATAGTAGT 59.644 40.000 0.00 0.00 0.00 2.73
2711 3187 6.127842 CCCGTGGTTTTGCAATTATAGTAGTT 60.128 38.462 0.00 0.00 0.00 2.24
2712 3188 6.745450 CCGTGGTTTTGCAATTATAGTAGTTG 59.255 38.462 0.00 0.00 0.00 3.16
2713 3189 7.302524 CGTGGTTTTGCAATTATAGTAGTTGT 58.697 34.615 0.00 0.00 0.00 3.32
2714 3190 7.806014 CGTGGTTTTGCAATTATAGTAGTTGTT 59.194 33.333 0.00 0.00 0.00 2.83
2730 3206 7.152645 AGTAGTTGTTATTATATGGTGGCTCG 58.847 38.462 0.00 0.00 0.00 5.03
2743 3219 1.001633 GTGGCTCGTTACTTCCCAGAA 59.998 52.381 0.00 0.00 0.00 3.02
2746 3222 2.608268 GCTCGTTACTTCCCAGAAGTC 58.392 52.381 12.99 0.39 0.00 3.01
2777 3253 1.518572 GTACCTCGCACATGGACGG 60.519 63.158 9.38 0.00 0.00 4.79
2807 3288 2.126346 GCGCCAAGGCATGTGAAC 60.126 61.111 12.19 0.00 42.06 3.18
2813 3294 2.359900 CCAAGGCATGTGAACTACTCC 58.640 52.381 0.00 0.00 0.00 3.85
2819 3300 2.159028 GCATGTGAACTACTCCCTCCTC 60.159 54.545 0.00 0.00 0.00 3.71
2820 3301 2.992847 TGTGAACTACTCCCTCCTCA 57.007 50.000 0.00 0.00 0.00 3.86
2821 3302 3.254093 TGTGAACTACTCCCTCCTCAA 57.746 47.619 0.00 0.00 0.00 3.02
2822 3303 3.583228 TGTGAACTACTCCCTCCTCAAA 58.417 45.455 0.00 0.00 0.00 2.69
2824 3305 4.597507 TGTGAACTACTCCCTCCTCAAAAT 59.402 41.667 0.00 0.00 0.00 1.82
2827 3308 6.819146 GTGAACTACTCCCTCCTCAAAATAAG 59.181 42.308 0.00 0.00 0.00 1.73
2828 3309 6.500751 TGAACTACTCCCTCCTCAAAATAAGT 59.499 38.462 0.00 0.00 0.00 2.24
2829 3310 6.301169 ACTACTCCCTCCTCAAAATAAGTG 57.699 41.667 0.00 0.00 0.00 3.16
2830 3311 5.785940 ACTACTCCCTCCTCAAAATAAGTGT 59.214 40.000 0.00 0.00 0.00 3.55
2831 3312 5.167303 ACTCCCTCCTCAAAATAAGTGTC 57.833 43.478 0.00 0.00 0.00 3.67
2832 3313 4.184629 CTCCCTCCTCAAAATAAGTGTCG 58.815 47.826 0.00 0.00 0.00 4.35
2844 3325 7.803189 TCAAAATAAGTGTCGCTCTTTCATTTC 59.197 33.333 0.00 0.00 0.00 2.17
2900 3381 6.406370 AGCACATAATTGTACTAAGTCAGCA 58.594 36.000 0.00 0.00 33.76 4.41
3024 3508 6.479660 AGTCGGTTTTCACAAATACTAAACGA 59.520 34.615 0.00 0.00 31.28 3.85
3075 3559 5.006746 CGGTAAAGATAACTTGACATGCTCC 59.993 44.000 2.89 0.00 38.80 4.70
3076 3560 5.880332 GGTAAAGATAACTTGACATGCTCCA 59.120 40.000 2.89 0.00 38.80 3.86
3077 3561 6.543831 GGTAAAGATAACTTGACATGCTCCAT 59.456 38.462 2.89 0.00 38.80 3.41
3078 3562 6.446781 AAAGATAACTTGACATGCTCCATG 57.553 37.500 3.80 3.80 40.60 3.66
3079 3563 5.363562 AGATAACTTGACATGCTCCATGA 57.636 39.130 11.78 0.00 43.81 3.07
3082 3566 3.361281 ACTTGACATGCTCCATGATGT 57.639 42.857 11.78 0.00 43.81 3.06
3083 3567 4.492494 ACTTGACATGCTCCATGATGTA 57.508 40.909 11.78 0.00 43.81 2.29
3085 3569 3.910568 TGACATGCTCCATGATGTACA 57.089 42.857 11.78 0.00 43.81 2.90
3086 3570 4.426736 TGACATGCTCCATGATGTACAT 57.573 40.909 8.43 8.43 43.81 2.29
3087 3571 4.383173 TGACATGCTCCATGATGTACATC 58.617 43.478 25.95 25.95 43.81 3.06
3088 3572 4.102054 TGACATGCTCCATGATGTACATCT 59.898 41.667 30.67 16.87 43.81 2.90
3089 3573 4.639334 ACATGCTCCATGATGTACATCTC 58.361 43.478 30.67 12.78 43.81 2.75
3090 3574 4.347292 ACATGCTCCATGATGTACATCTCT 59.653 41.667 30.67 18.30 43.81 3.10
3091 3575 5.163227 ACATGCTCCATGATGTACATCTCTT 60.163 40.000 30.67 16.27 43.81 2.85
3092 3576 4.700700 TGCTCCATGATGTACATCTCTTG 58.299 43.478 30.67 24.04 38.60 3.02
3093 3577 4.063689 GCTCCATGATGTACATCTCTTGG 58.936 47.826 30.67 29.49 38.60 3.61
3094 3578 4.444022 GCTCCATGATGTACATCTCTTGGT 60.444 45.833 30.61 15.19 38.60 3.67
3095 3579 5.282055 TCCATGATGTACATCTCTTGGTC 57.718 43.478 30.61 14.06 38.60 4.02
3096 3580 4.053983 CCATGATGTACATCTCTTGGTCG 58.946 47.826 30.67 13.24 38.60 4.79
3097 3581 4.202151 CCATGATGTACATCTCTTGGTCGA 60.202 45.833 30.67 12.23 38.60 4.20
3098 3582 4.371855 TGATGTACATCTCTTGGTCGAC 57.628 45.455 30.67 7.13 38.60 4.20
3099 3583 3.761752 TGATGTACATCTCTTGGTCGACA 59.238 43.478 30.67 8.99 38.60 4.35
3100 3584 4.219725 TGATGTACATCTCTTGGTCGACAA 59.780 41.667 30.67 2.10 38.60 3.18
3101 3585 4.594123 TGTACATCTCTTGGTCGACAAA 57.406 40.909 18.91 12.07 38.91 2.83
3102 3586 4.556233 TGTACATCTCTTGGTCGACAAAG 58.444 43.478 24.29 24.29 38.91 2.77
3103 3587 2.417719 ACATCTCTTGGTCGACAAAGC 58.582 47.619 25.23 5.23 38.91 3.51
3104 3588 2.224281 ACATCTCTTGGTCGACAAAGCA 60.224 45.455 25.23 15.47 38.91 3.91
3105 3589 2.839486 TCTCTTGGTCGACAAAGCAT 57.161 45.000 25.23 0.00 38.91 3.79
3106 3590 3.126001 TCTCTTGGTCGACAAAGCATT 57.874 42.857 25.23 0.00 38.91 3.56
3107 3591 3.067106 TCTCTTGGTCGACAAAGCATTC 58.933 45.455 25.23 2.63 38.91 2.67
3108 3592 2.807967 CTCTTGGTCGACAAAGCATTCA 59.192 45.455 25.23 9.03 38.91 2.57
3109 3593 3.411446 TCTTGGTCGACAAAGCATTCAT 58.589 40.909 25.23 0.00 38.91 2.57
3110 3594 3.189080 TCTTGGTCGACAAAGCATTCATG 59.811 43.478 25.23 10.00 38.91 3.07
3111 3595 1.811965 TGGTCGACAAAGCATTCATGG 59.188 47.619 18.91 0.00 0.00 3.66
3112 3596 2.083774 GGTCGACAAAGCATTCATGGA 58.916 47.619 18.91 0.00 0.00 3.41
3113 3597 2.096496 GGTCGACAAAGCATTCATGGAG 59.904 50.000 18.91 0.00 0.00 3.86
3114 3598 3.002791 GTCGACAAAGCATTCATGGAGA 58.997 45.455 11.55 0.00 0.00 3.71
3115 3599 3.624861 GTCGACAAAGCATTCATGGAGAT 59.375 43.478 11.55 0.00 0.00 2.75
3116 3600 3.624410 TCGACAAAGCATTCATGGAGATG 59.376 43.478 0.00 0.00 0.00 2.90
3117 3601 3.624410 CGACAAAGCATTCATGGAGATGA 59.376 43.478 8.27 0.00 36.78 2.92
3118 3602 4.275196 CGACAAAGCATTCATGGAGATGAT 59.725 41.667 8.27 0.64 38.43 2.45
3119 3603 5.515797 ACAAAGCATTCATGGAGATGATG 57.484 39.130 8.27 6.47 38.43 3.07
3120 3604 5.198207 ACAAAGCATTCATGGAGATGATGA 58.802 37.500 8.27 0.00 38.43 2.92
3121 3605 5.833667 ACAAAGCATTCATGGAGATGATGAT 59.166 36.000 8.27 0.00 38.43 2.45
3122 3606 7.002276 ACAAAGCATTCATGGAGATGATGATA 58.998 34.615 8.27 0.00 38.43 2.15
3123 3607 7.040617 ACAAAGCATTCATGGAGATGATGATAC 60.041 37.037 8.27 0.00 38.43 2.24
3124 3608 5.176592 AGCATTCATGGAGATGATGATACG 58.823 41.667 8.27 0.00 38.43 3.06
3125 3609 4.934001 GCATTCATGGAGATGATGATACGT 59.066 41.667 0.00 0.00 38.43 3.57
3126 3610 6.071165 AGCATTCATGGAGATGATGATACGTA 60.071 38.462 0.00 0.00 38.43 3.57
3127 3611 6.760298 GCATTCATGGAGATGATGATACGTAT 59.240 38.462 8.05 8.05 38.43 3.06
3128 3612 7.279536 GCATTCATGGAGATGATGATACGTATT 59.720 37.037 9.92 0.00 38.43 1.89
3129 3613 8.815189 CATTCATGGAGATGATGATACGTATTC 58.185 37.037 9.92 4.93 38.43 1.75
3130 3614 7.709149 TCATGGAGATGATGATACGTATTCT 57.291 36.000 9.92 7.94 33.40 2.40
3131 3615 8.127150 TCATGGAGATGATGATACGTATTCTT 57.873 34.615 9.92 2.61 33.40 2.52
3132 3616 8.588472 TCATGGAGATGATGATACGTATTCTTT 58.412 33.333 9.92 0.00 33.40 2.52
3133 3617 9.212641 CATGGAGATGATGATACGTATTCTTTT 57.787 33.333 9.92 0.00 0.00 2.27
3134 3618 8.593492 TGGAGATGATGATACGTATTCTTTTG 57.407 34.615 9.92 0.00 0.00 2.44
3135 3619 7.657354 TGGAGATGATGATACGTATTCTTTTGG 59.343 37.037 9.92 0.00 0.00 3.28
3136 3620 7.118390 GGAGATGATGATACGTATTCTTTTGGG 59.882 40.741 9.92 0.00 0.00 4.12
3137 3621 6.936900 AGATGATGATACGTATTCTTTTGGGG 59.063 38.462 9.92 0.00 0.00 4.96
3138 3622 4.819630 TGATGATACGTATTCTTTTGGGGC 59.180 41.667 9.92 0.00 0.00 5.80
3139 3623 3.199677 TGATACGTATTCTTTTGGGGCG 58.800 45.455 9.92 0.00 0.00 6.13
3140 3624 2.766345 TACGTATTCTTTTGGGGCGT 57.234 45.000 0.00 0.00 35.29 5.68
3141 3625 1.161843 ACGTATTCTTTTGGGGCGTG 58.838 50.000 0.00 0.00 0.00 5.34
3142 3626 1.161843 CGTATTCTTTTGGGGCGTGT 58.838 50.000 0.00 0.00 0.00 4.49
3143 3627 1.135803 CGTATTCTTTTGGGGCGTGTG 60.136 52.381 0.00 0.00 0.00 3.82
3144 3628 0.885196 TATTCTTTTGGGGCGTGTGC 59.115 50.000 0.00 0.00 41.71 4.57
3145 3629 2.141122 ATTCTTTTGGGGCGTGTGCG 62.141 55.000 0.00 0.00 44.10 5.34
3146 3630 3.591835 CTTTTGGGGCGTGTGCGT 61.592 61.111 0.00 0.00 44.10 5.24
3147 3631 2.203167 TTTTGGGGCGTGTGCGTA 60.203 55.556 0.00 0.00 44.10 4.42
3148 3632 1.582610 CTTTTGGGGCGTGTGCGTAT 61.583 55.000 0.00 0.00 44.10 3.06
3149 3633 1.857318 TTTTGGGGCGTGTGCGTATG 61.857 55.000 0.00 0.00 44.10 2.39
3161 3645 3.848830 CGTATGCCGCACGGTGTG 61.849 66.667 14.56 14.56 35.78 3.82
3162 3646 2.433491 GTATGCCGCACGGTGTGA 60.433 61.111 22.43 4.40 35.23 3.58
3163 3647 2.125713 TATGCCGCACGGTGTGAG 60.126 61.111 22.43 13.30 35.23 3.51
3164 3648 2.641277 TATGCCGCACGGTGTGAGA 61.641 57.895 22.43 8.91 35.44 3.27
3165 3649 1.955495 TATGCCGCACGGTGTGAGAT 61.955 55.000 22.43 14.89 35.44 2.75
3166 3650 3.490759 GCCGCACGGTGTGAGATG 61.491 66.667 22.43 7.23 35.44 2.90
3167 3651 3.490759 CCGCACGGTGTGAGATGC 61.491 66.667 22.43 0.00 35.44 3.91
3168 3652 3.490759 CGCACGGTGTGAGATGCC 61.491 66.667 16.38 0.00 35.44 4.40
3169 3653 2.358615 GCACGGTGTGAGATGCCA 60.359 61.111 10.24 0.00 35.23 4.92
3170 3654 1.965930 GCACGGTGTGAGATGCCAA 60.966 57.895 10.24 0.00 35.23 4.52
3171 3655 1.868997 CACGGTGTGAGATGCCAAC 59.131 57.895 0.00 0.00 35.23 3.77
3172 3656 0.884259 CACGGTGTGAGATGCCAACA 60.884 55.000 0.00 0.00 35.23 3.33
3173 3657 0.884704 ACGGTGTGAGATGCCAACAC 60.885 55.000 0.00 0.00 35.45 3.32
3174 3658 1.868997 GGTGTGAGATGCCAACACG 59.131 57.895 0.00 0.00 37.35 4.49
3175 3659 0.884704 GGTGTGAGATGCCAACACGT 60.885 55.000 0.00 0.00 37.35 4.49
3176 3660 0.512952 GTGTGAGATGCCAACACGTC 59.487 55.000 0.00 0.00 37.35 4.34
3177 3661 0.105778 TGTGAGATGCCAACACGTCA 59.894 50.000 0.00 0.00 37.35 4.35
3178 3662 1.225855 GTGAGATGCCAACACGTCAA 58.774 50.000 0.00 0.00 0.00 3.18
3179 3663 1.601903 GTGAGATGCCAACACGTCAAA 59.398 47.619 0.00 0.00 0.00 2.69
3180 3664 2.032799 GTGAGATGCCAACACGTCAAAA 59.967 45.455 0.00 0.00 0.00 2.44
3181 3665 2.290367 TGAGATGCCAACACGTCAAAAG 59.710 45.455 0.00 0.00 0.00 2.27
3182 3666 2.290641 GAGATGCCAACACGTCAAAAGT 59.709 45.455 0.00 0.00 0.00 2.66
3183 3667 3.472652 AGATGCCAACACGTCAAAAGTA 58.527 40.909 0.00 0.00 0.00 2.24
3184 3668 4.072131 AGATGCCAACACGTCAAAAGTAT 58.928 39.130 0.00 0.00 0.00 2.12
3185 3669 5.242434 AGATGCCAACACGTCAAAAGTATA 58.758 37.500 0.00 0.00 0.00 1.47
3186 3670 4.735662 TGCCAACACGTCAAAAGTATAC 57.264 40.909 0.00 0.00 0.00 1.47
3187 3671 4.127907 TGCCAACACGTCAAAAGTATACA 58.872 39.130 5.50 0.00 0.00 2.29
3188 3672 4.757657 TGCCAACACGTCAAAAGTATACAT 59.242 37.500 5.50 0.00 0.00 2.29
3189 3673 5.086058 GCCAACACGTCAAAAGTATACATG 58.914 41.667 5.50 1.54 0.00 3.21
3190 3674 5.627172 CCAACACGTCAAAAGTATACATGG 58.373 41.667 5.50 0.00 0.00 3.66
3191 3675 5.410132 CCAACACGTCAAAAGTATACATGGA 59.590 40.000 5.50 0.00 0.00 3.41
3192 3676 6.402118 CCAACACGTCAAAAGTATACATGGAG 60.402 42.308 5.50 2.56 0.00 3.86
3193 3677 6.032956 ACACGTCAAAAGTATACATGGAGA 57.967 37.500 5.50 0.00 0.00 3.71
3194 3678 6.640518 ACACGTCAAAAGTATACATGGAGAT 58.359 36.000 5.50 0.00 0.00 2.75
3195 3679 6.535150 ACACGTCAAAAGTATACATGGAGATG 59.465 38.462 5.50 4.68 35.49 2.90
3196 3680 6.756542 CACGTCAAAAGTATACATGGAGATGA 59.243 38.462 5.50 0.00 33.36 2.92
3197 3681 7.439356 CACGTCAAAAGTATACATGGAGATGAT 59.561 37.037 5.50 0.00 33.36 2.45
3198 3682 7.439356 ACGTCAAAAGTATACATGGAGATGATG 59.561 37.037 5.50 7.35 33.36 3.07
3199 3683 7.653311 CGTCAAAAGTATACATGGAGATGATGA 59.347 37.037 5.50 0.00 33.36 2.92
3200 3684 9.499479 GTCAAAAGTATACATGGAGATGATGAT 57.501 33.333 5.50 0.00 33.36 2.45
3203 3687 9.950496 AAAAGTATACATGGAGATGATGATACC 57.050 33.333 5.50 0.00 33.36 2.73
3204 3688 7.667575 AGTATACATGGAGATGATGATACCC 57.332 40.000 5.50 0.00 33.36 3.69
3205 3689 5.965033 ATACATGGAGATGATGATACCCC 57.035 43.478 0.00 0.00 33.36 4.95
3206 3690 2.915604 ACATGGAGATGATGATACCCCC 59.084 50.000 0.00 0.00 33.36 5.40
3207 3691 3.187942 CATGGAGATGATGATACCCCCT 58.812 50.000 0.00 0.00 0.00 4.79
3208 3692 2.907892 TGGAGATGATGATACCCCCTC 58.092 52.381 0.00 0.00 0.00 4.30
3209 3693 2.192263 GGAGATGATGATACCCCCTCC 58.808 57.143 0.00 0.00 32.98 4.30
3210 3694 2.192263 GAGATGATGATACCCCCTCCC 58.808 57.143 0.00 0.00 0.00 4.30
3211 3695 1.203492 AGATGATGATACCCCCTCCCC 60.203 57.143 0.00 0.00 0.00 4.81
3212 3696 0.577916 ATGATGATACCCCCTCCCCA 59.422 55.000 0.00 0.00 0.00 4.96
3213 3697 0.401395 TGATGATACCCCCTCCCCAC 60.401 60.000 0.00 0.00 0.00 4.61
3214 3698 0.401395 GATGATACCCCCTCCCCACA 60.401 60.000 0.00 0.00 0.00 4.17
3215 3699 0.047176 ATGATACCCCCTCCCCACAA 59.953 55.000 0.00 0.00 0.00 3.33
3216 3700 0.917333 TGATACCCCCTCCCCACAAC 60.917 60.000 0.00 0.00 0.00 3.32
3217 3701 1.621514 ATACCCCCTCCCCACAACC 60.622 63.158 0.00 0.00 0.00 3.77
3218 3702 2.146224 ATACCCCCTCCCCACAACCT 62.146 60.000 0.00 0.00 0.00 3.50
3219 3703 2.776053 TACCCCCTCCCCACAACCTC 62.776 65.000 0.00 0.00 0.00 3.85
3220 3704 3.339093 CCCCTCCCCACAACCTCC 61.339 72.222 0.00 0.00 0.00 4.30
3221 3705 3.339093 CCCTCCCCACAACCTCCC 61.339 72.222 0.00 0.00 0.00 4.30
3222 3706 3.339093 CCTCCCCACAACCTCCCC 61.339 72.222 0.00 0.00 0.00 4.81
3223 3707 2.531685 CTCCCCACAACCTCCCCA 60.532 66.667 0.00 0.00 0.00 4.96
3224 3708 2.038221 TCCCCACAACCTCCCCAA 60.038 61.111 0.00 0.00 0.00 4.12
3225 3709 1.467190 TCCCCACAACCTCCCCAAT 60.467 57.895 0.00 0.00 0.00 3.16
3226 3710 1.077298 TCCCCACAACCTCCCCAATT 61.077 55.000 0.00 0.00 0.00 2.32
3227 3711 0.904394 CCCCACAACCTCCCCAATTG 60.904 60.000 0.00 0.00 0.00 2.32
3228 3712 0.904394 CCCACAACCTCCCCAATTGG 60.904 60.000 18.21 18.21 0.00 3.16
3229 3713 0.114168 CCACAACCTCCCCAATTGGA 59.886 55.000 26.60 5.83 37.39 3.53
3230 3714 1.273211 CCACAACCTCCCCAATTGGAT 60.273 52.381 26.60 2.80 37.39 3.41
3231 3715 2.024464 CCACAACCTCCCCAATTGGATA 60.024 50.000 26.60 11.95 37.39 2.59
3232 3716 3.374098 CCACAACCTCCCCAATTGGATAT 60.374 47.826 26.60 3.53 37.39 1.63
3233 3717 3.891366 CACAACCTCCCCAATTGGATATC 59.109 47.826 26.60 0.00 37.39 1.63
3234 3718 3.531397 ACAACCTCCCCAATTGGATATCA 59.469 43.478 26.60 3.55 37.39 2.15
3235 3719 4.170647 ACAACCTCCCCAATTGGATATCAT 59.829 41.667 26.60 5.05 37.39 2.45
3236 3720 4.393239 ACCTCCCCAATTGGATATCATG 57.607 45.455 26.60 6.86 37.39 3.07
3237 3721 3.989558 ACCTCCCCAATTGGATATCATGA 59.010 43.478 26.60 0.00 37.39 3.07
3238 3722 4.419875 ACCTCCCCAATTGGATATCATGAA 59.580 41.667 26.60 0.00 37.39 2.57
3239 3723 4.768968 CCTCCCCAATTGGATATCATGAAC 59.231 45.833 26.60 0.00 37.39 3.18
3240 3724 5.458654 CCTCCCCAATTGGATATCATGAACT 60.459 44.000 26.60 0.00 37.39 3.01
3241 3725 6.029492 TCCCCAATTGGATATCATGAACTT 57.971 37.500 26.60 0.00 37.39 2.66
3242 3726 6.442961 TCCCCAATTGGATATCATGAACTTT 58.557 36.000 26.60 0.00 37.39 2.66
3243 3727 6.902416 TCCCCAATTGGATATCATGAACTTTT 59.098 34.615 26.60 0.00 37.39 2.27
3244 3728 6.987992 CCCCAATTGGATATCATGAACTTTTG 59.012 38.462 26.60 2.36 37.39 2.44
3245 3729 7.364939 CCCCAATTGGATATCATGAACTTTTGT 60.365 37.037 26.60 0.00 37.39 2.83
3246 3730 8.694540 CCCAATTGGATATCATGAACTTTTGTA 58.305 33.333 26.60 0.00 37.39 2.41
3252 3736 9.904198 TGGATATCATGAACTTTTGTAATGAGA 57.096 29.630 0.00 0.00 38.32 3.27
3270 3754 5.013568 TGAGAGACGTTTGAAAGGTGTAA 57.986 39.130 8.09 0.00 0.00 2.41
3346 3830 2.574006 AGTATCATCCGCATTGCCAT 57.426 45.000 2.41 0.00 0.00 4.40
3379 3863 0.747283 GCCAGTGGAGGATGCAAGAG 60.747 60.000 15.20 0.00 39.09 2.85
3449 3933 0.028505 CATGGTAAGCATGCTGTCGC 59.971 55.000 23.48 11.43 0.00 5.19
3473 3957 1.378382 CCATGTCGCCCAACCATCA 60.378 57.895 0.00 0.00 0.00 3.07
3476 3960 3.124921 GTCGCCCAACCATCACCG 61.125 66.667 0.00 0.00 0.00 4.94
3500 3984 2.206576 ACTTTCCCTGAGGTTGATGC 57.793 50.000 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.238650 GCCTGAAGTACAAAGCAAGTTAAGA 59.761 40.000 0.00 0.00 0.00 2.10
1 2 5.452777 GCCTGAAGTACAAAGCAAGTTAAG 58.547 41.667 0.00 0.00 0.00 1.85
2 3 4.277423 GGCCTGAAGTACAAAGCAAGTTAA 59.723 41.667 0.00 0.00 31.85 2.01
3 4 3.818773 GGCCTGAAGTACAAAGCAAGTTA 59.181 43.478 0.00 0.00 31.85 2.24
4 5 2.623416 GGCCTGAAGTACAAAGCAAGTT 59.377 45.455 0.00 0.00 31.85 2.66
5 6 2.230660 GGCCTGAAGTACAAAGCAAGT 58.769 47.619 0.00 0.00 31.85 3.16
6 7 2.229792 TGGCCTGAAGTACAAAGCAAG 58.770 47.619 3.32 0.00 31.85 4.01
7 8 2.356665 TGGCCTGAAGTACAAAGCAA 57.643 45.000 3.32 0.00 31.85 3.91
8 9 2.584835 ATGGCCTGAAGTACAAAGCA 57.415 45.000 3.32 0.00 31.85 3.91
9 10 3.610911 ACTATGGCCTGAAGTACAAAGC 58.389 45.455 3.32 0.00 0.00 3.51
10 11 7.103641 TCTTAACTATGGCCTGAAGTACAAAG 58.896 38.462 3.32 9.39 0.00 2.77
11 12 7.011499 TCTTAACTATGGCCTGAAGTACAAA 57.989 36.000 3.32 0.59 0.00 2.83
12 13 6.614694 TCTTAACTATGGCCTGAAGTACAA 57.385 37.500 3.32 2.53 0.00 2.41
13 14 6.808321 ATCTTAACTATGGCCTGAAGTACA 57.192 37.500 3.32 0.00 0.00 2.90
14 15 7.272978 TCAATCTTAACTATGGCCTGAAGTAC 58.727 38.462 3.32 0.00 0.00 2.73
15 16 7.419057 CCTCAATCTTAACTATGGCCTGAAGTA 60.419 40.741 3.32 0.00 0.00 2.24
16 17 6.313519 TCAATCTTAACTATGGCCTGAAGT 57.686 37.500 3.32 1.31 0.00 3.01
17 18 5.762218 CCTCAATCTTAACTATGGCCTGAAG 59.238 44.000 3.32 0.58 0.00 3.02
18 19 5.397899 CCCTCAATCTTAACTATGGCCTGAA 60.398 44.000 3.32 0.00 0.00 3.02
19 20 4.103153 CCCTCAATCTTAACTATGGCCTGA 59.897 45.833 3.32 0.00 0.00 3.86
20 21 4.103153 TCCCTCAATCTTAACTATGGCCTG 59.897 45.833 3.32 0.00 0.00 4.85
21 22 4.307259 TCCCTCAATCTTAACTATGGCCT 58.693 43.478 3.32 0.00 0.00 5.19
22 23 4.505742 CCTCCCTCAATCTTAACTATGGCC 60.506 50.000 0.00 0.00 0.00 5.36
23 24 4.505742 CCCTCCCTCAATCTTAACTATGGC 60.506 50.000 0.00 0.00 0.00 4.40
24 25 4.660771 ACCCTCCCTCAATCTTAACTATGG 59.339 45.833 0.00 0.00 0.00 2.74
25 26 5.131142 ACACCCTCCCTCAATCTTAACTATG 59.869 44.000 0.00 0.00 0.00 2.23
26 27 5.289510 ACACCCTCCCTCAATCTTAACTAT 58.710 41.667 0.00 0.00 0.00 2.12
27 28 4.695606 ACACCCTCCCTCAATCTTAACTA 58.304 43.478 0.00 0.00 0.00 2.24
28 29 3.532102 ACACCCTCCCTCAATCTTAACT 58.468 45.455 0.00 0.00 0.00 2.24
29 30 4.302559 AACACCCTCCCTCAATCTTAAC 57.697 45.455 0.00 0.00 0.00 2.01
30 31 5.189145 GTCTAACACCCTCCCTCAATCTTAA 59.811 44.000 0.00 0.00 0.00 1.85
31 32 4.715297 GTCTAACACCCTCCCTCAATCTTA 59.285 45.833 0.00 0.00 0.00 2.10
32 33 3.519913 GTCTAACACCCTCCCTCAATCTT 59.480 47.826 0.00 0.00 0.00 2.40
33 34 3.108376 GTCTAACACCCTCCCTCAATCT 58.892 50.000 0.00 0.00 0.00 2.40
34 35 3.108376 AGTCTAACACCCTCCCTCAATC 58.892 50.000 0.00 0.00 0.00 2.67
35 36 2.840651 CAGTCTAACACCCTCCCTCAAT 59.159 50.000 0.00 0.00 0.00 2.57
36 37 2.257207 CAGTCTAACACCCTCCCTCAA 58.743 52.381 0.00 0.00 0.00 3.02
37 38 1.149288 ACAGTCTAACACCCTCCCTCA 59.851 52.381 0.00 0.00 0.00 3.86
38 39 1.939980 ACAGTCTAACACCCTCCCTC 58.060 55.000 0.00 0.00 0.00 4.30
39 40 3.778622 ATACAGTCTAACACCCTCCCT 57.221 47.619 0.00 0.00 0.00 4.20
40 41 6.073314 TGTATATACAGTCTAACACCCTCCC 58.927 44.000 11.62 0.00 0.00 4.30
41 42 7.778185 ATGTATATACAGTCTAACACCCTCC 57.222 40.000 19.80 0.00 39.92 4.30
42 43 8.460428 GCTATGTATATACAGTCTAACACCCTC 58.540 40.741 19.80 0.00 39.92 4.30
43 44 7.396623 GGCTATGTATATACAGTCTAACACCCT 59.603 40.741 19.80 2.66 39.92 4.34
44 45 7.396623 AGGCTATGTATATACAGTCTAACACCC 59.603 40.741 19.80 9.86 39.92 4.61
45 46 8.350852 AGGCTATGTATATACAGTCTAACACC 57.649 38.462 19.80 12.05 39.92 4.16
46 47 9.233649 AGAGGCTATGTATATACAGTCTAACAC 57.766 37.037 19.80 7.69 39.92 3.32
47 48 9.232473 CAGAGGCTATGTATATACAGTCTAACA 57.768 37.037 19.80 0.00 39.92 2.41
48 49 9.233649 ACAGAGGCTATGTATATACAGTCTAAC 57.766 37.037 19.80 10.48 39.92 2.34
50 51 9.887629 GTACAGAGGCTATGTATATACAGTCTA 57.112 37.037 23.30 7.87 39.92 2.59
51 52 8.383947 TGTACAGAGGCTATGTATATACAGTCT 58.616 37.037 23.30 14.00 39.92 3.24
52 53 8.563123 TGTACAGAGGCTATGTATATACAGTC 57.437 38.462 23.30 9.69 39.92 3.51
53 54 8.383947 TCTGTACAGAGGCTATGTATATACAGT 58.616 37.037 28.33 12.08 36.02 3.55
54 55 8.794335 TCTGTACAGAGGCTATGTATATACAG 57.206 38.462 25.87 25.87 35.95 2.74
61 62 9.755122 ACAATATATCTGTACAGAGGCTATGTA 57.245 33.333 28.29 17.48 41.33 2.29
62 63 8.657387 ACAATATATCTGTACAGAGGCTATGT 57.343 34.615 28.29 24.20 41.33 2.29
65 66 9.582648 TGTTACAATATATCTGTACAGAGGCTA 57.417 33.333 28.29 17.45 41.33 3.93
66 67 8.478775 TGTTACAATATATCTGTACAGAGGCT 57.521 34.615 28.29 15.89 41.33 4.58
67 68 9.712305 AATGTTACAATATATCTGTACAGAGGC 57.288 33.333 28.29 10.51 41.33 4.70
81 82 9.930158 AAGGGGTACAATACAATGTTACAATAT 57.070 29.630 0.00 0.00 34.75 1.28
82 83 9.179909 CAAGGGGTACAATACAATGTTACAATA 57.820 33.333 0.00 0.00 34.75 1.90
83 84 7.123547 CCAAGGGGTACAATACAATGTTACAAT 59.876 37.037 0.00 0.00 34.75 2.71
84 85 6.434652 CCAAGGGGTACAATACAATGTTACAA 59.565 38.462 0.00 0.00 34.75 2.41
85 86 5.946972 CCAAGGGGTACAATACAATGTTACA 59.053 40.000 0.00 0.00 34.75 2.41
86 87 5.358725 CCCAAGGGGTACAATACAATGTTAC 59.641 44.000 0.00 0.00 38.25 2.50
87 88 5.511363 CCCAAGGGGTACAATACAATGTTA 58.489 41.667 0.00 0.00 38.25 2.41
88 89 4.349365 CCCAAGGGGTACAATACAATGTT 58.651 43.478 0.00 0.00 38.25 2.71
89 90 3.976015 CCCAAGGGGTACAATACAATGT 58.024 45.455 0.00 0.00 38.25 2.71
102 103 7.754979 TCTCATTATATAGAGGTACCCAAGGGG 60.755 44.444 8.74 3.34 39.47 4.79
103 104 7.189794 TCTCATTATATAGAGGTACCCAAGGG 58.810 42.308 8.74 2.91 35.52 3.95
104 105 8.846423 ATCTCATTATATAGAGGTACCCAAGG 57.154 38.462 8.74 0.00 32.76 3.61
106 107 9.422681 GCTATCTCATTATATAGAGGTACCCAA 57.577 37.037 8.74 0.00 32.76 4.12
107 108 8.005388 GGCTATCTCATTATATAGAGGTACCCA 58.995 40.741 8.74 0.00 28.10 4.51
108 109 8.005388 TGGCTATCTCATTATATAGAGGTACCC 58.995 40.741 8.74 0.00 32.76 3.69
109 110 8.852135 GTGGCTATCTCATTATATAGAGGTACC 58.148 40.741 2.73 2.73 32.76 3.34
110 111 9.409918 TGTGGCTATCTCATTATATAGAGGTAC 57.590 37.037 0.00 0.00 32.76 3.34
111 112 9.409918 GTGTGGCTATCTCATTATATAGAGGTA 57.590 37.037 0.00 0.00 32.76 3.08
112 113 7.343316 GGTGTGGCTATCTCATTATATAGAGGT 59.657 40.741 0.00 0.00 32.76 3.85
113 114 7.201956 GGGTGTGGCTATCTCATTATATAGAGG 60.202 44.444 0.00 0.00 32.76 3.69
114 115 7.201956 GGGGTGTGGCTATCTCATTATATAGAG 60.202 44.444 0.00 0.00 0.00 2.43
115 116 6.611642 GGGGTGTGGCTATCTCATTATATAGA 59.388 42.308 0.00 0.00 0.00 1.98
116 117 6.461648 CGGGGTGTGGCTATCTCATTATATAG 60.462 46.154 0.00 0.00 0.00 1.31
117 118 5.362717 CGGGGTGTGGCTATCTCATTATATA 59.637 44.000 0.00 0.00 0.00 0.86
118 119 4.162320 CGGGGTGTGGCTATCTCATTATAT 59.838 45.833 0.00 0.00 0.00 0.86
119 120 3.513912 CGGGGTGTGGCTATCTCATTATA 59.486 47.826 0.00 0.00 0.00 0.98
120 121 2.303022 CGGGGTGTGGCTATCTCATTAT 59.697 50.000 0.00 0.00 0.00 1.28
121 122 1.691976 CGGGGTGTGGCTATCTCATTA 59.308 52.381 0.00 0.00 0.00 1.90
122 123 0.469917 CGGGGTGTGGCTATCTCATT 59.530 55.000 0.00 0.00 0.00 2.57
123 124 1.410850 CCGGGGTGTGGCTATCTCAT 61.411 60.000 0.00 0.00 0.00 2.90
124 125 2.063979 CCGGGGTGTGGCTATCTCA 61.064 63.158 0.00 0.00 0.00 3.27
125 126 1.623542 AACCGGGGTGTGGCTATCTC 61.624 60.000 6.32 0.00 0.00 2.75
126 127 1.205460 AAACCGGGGTGTGGCTATCT 61.205 55.000 6.32 0.00 0.00 1.98
127 128 0.542805 TAAACCGGGGTGTGGCTATC 59.457 55.000 6.32 0.00 0.00 2.08
128 129 0.544697 CTAAACCGGGGTGTGGCTAT 59.455 55.000 6.32 0.00 0.00 2.97
129 130 1.555477 CCTAAACCGGGGTGTGGCTA 61.555 60.000 6.32 0.00 0.00 3.93
130 131 2.754375 CTAAACCGGGGTGTGGCT 59.246 61.111 6.32 0.00 0.00 4.75
131 132 2.360726 CCTAAACCGGGGTGTGGC 60.361 66.667 6.32 0.00 0.00 5.01
132 133 1.302993 CACCTAAACCGGGGTGTGG 60.303 63.158 16.95 9.69 45.52 4.17
133 134 4.390048 CACCTAAACCGGGGTGTG 57.610 61.111 16.95 8.13 45.52 3.82
136 137 1.055551 TGACACACCTAAACCGGGGT 61.056 55.000 6.32 0.00 42.80 4.95
137 138 0.326927 ATGACACACCTAAACCGGGG 59.673 55.000 6.32 0.00 0.00 5.73
138 139 1.448985 CATGACACACCTAAACCGGG 58.551 55.000 6.32 0.00 0.00 5.73
139 140 0.802494 GCATGACACACCTAAACCGG 59.198 55.000 0.00 0.00 0.00 5.28
140 141 1.464608 CTGCATGACACACCTAAACCG 59.535 52.381 0.00 0.00 0.00 4.44
141 142 2.504367 ACTGCATGACACACCTAAACC 58.496 47.619 0.00 0.00 0.00 3.27
142 143 3.058224 GGAACTGCATGACACACCTAAAC 60.058 47.826 0.00 0.00 0.00 2.01
143 144 3.146066 GGAACTGCATGACACACCTAAA 58.854 45.455 0.00 0.00 0.00 1.85
144 145 2.552155 GGGAACTGCATGACACACCTAA 60.552 50.000 0.00 0.00 0.00 2.69
145 146 1.003118 GGGAACTGCATGACACACCTA 59.997 52.381 0.00 0.00 0.00 3.08
146 147 0.250901 GGGAACTGCATGACACACCT 60.251 55.000 0.00 0.00 0.00 4.00
147 148 0.537143 TGGGAACTGCATGACACACC 60.537 55.000 0.00 0.00 0.00 4.16
148 149 1.317613 TTGGGAACTGCATGACACAC 58.682 50.000 0.00 0.00 0.00 3.82
149 150 2.064434 TTTGGGAACTGCATGACACA 57.936 45.000 0.00 0.00 0.00 3.72
150 151 2.557924 TGATTTGGGAACTGCATGACAC 59.442 45.455 0.00 0.00 0.00 3.67
151 152 2.874014 TGATTTGGGAACTGCATGACA 58.126 42.857 0.00 0.00 0.00 3.58
152 153 5.068198 ACATATGATTTGGGAACTGCATGAC 59.932 40.000 10.38 0.00 0.00 3.06
153 154 5.202765 ACATATGATTTGGGAACTGCATGA 58.797 37.500 10.38 0.00 0.00 3.07
154 155 5.301045 AGACATATGATTTGGGAACTGCATG 59.699 40.000 10.38 0.00 0.00 4.06
155 156 5.452255 AGACATATGATTTGGGAACTGCAT 58.548 37.500 10.38 0.00 0.00 3.96
156 157 4.858850 AGACATATGATTTGGGAACTGCA 58.141 39.130 10.38 0.00 0.00 4.41
157 158 5.841957 AAGACATATGATTTGGGAACTGC 57.158 39.130 10.38 0.00 0.00 4.40
158 159 7.012704 CCTGTAAGACATATGATTTGGGAACTG 59.987 40.741 10.38 3.36 34.07 3.16
159 160 7.056635 CCTGTAAGACATATGATTTGGGAACT 58.943 38.462 10.38 0.00 34.07 3.01
160 161 7.054124 TCCTGTAAGACATATGATTTGGGAAC 58.946 38.462 10.38 0.01 34.07 3.62
161 162 7.206789 TCCTGTAAGACATATGATTTGGGAA 57.793 36.000 10.38 0.00 34.07 3.97
162 163 6.823286 TCCTGTAAGACATATGATTTGGGA 57.177 37.500 10.38 9.39 34.07 4.37
163 164 6.016777 GCTTCCTGTAAGACATATGATTTGGG 60.017 42.308 10.38 7.59 37.38 4.12
164 165 6.293081 CGCTTCCTGTAAGACATATGATTTGG 60.293 42.308 10.38 7.36 37.38 3.28
165 166 6.653183 CGCTTCCTGTAAGACATATGATTTG 58.347 40.000 10.38 0.00 37.38 2.32
166 167 5.237344 GCGCTTCCTGTAAGACATATGATTT 59.763 40.000 10.38 5.77 37.38 2.17
167 168 4.752101 GCGCTTCCTGTAAGACATATGATT 59.248 41.667 10.38 6.45 37.38 2.57
168 169 4.310769 GCGCTTCCTGTAAGACATATGAT 58.689 43.478 10.38 0.00 37.38 2.45
169 170 3.492656 GGCGCTTCCTGTAAGACATATGA 60.493 47.826 10.38 0.00 37.38 2.15
170 171 2.802816 GGCGCTTCCTGTAAGACATATG 59.197 50.000 7.64 0.00 37.38 1.78
171 172 2.700897 AGGCGCTTCCTGTAAGACATAT 59.299 45.455 7.64 0.00 45.54 1.78
172 173 2.108168 AGGCGCTTCCTGTAAGACATA 58.892 47.619 7.64 0.00 45.54 2.29
173 174 0.905357 AGGCGCTTCCTGTAAGACAT 59.095 50.000 7.64 0.00 45.54 3.06
174 175 2.362242 AGGCGCTTCCTGTAAGACA 58.638 52.632 7.64 0.00 45.54 3.41
207 208 1.157751 TTCTCGTCTGGGGAAGGGT 59.842 57.895 0.00 0.00 0.00 4.34
217 218 2.169769 TGTTCCCTTGTTGTTCTCGTCT 59.830 45.455 0.00 0.00 0.00 4.18
345 346 6.484288 AGGTTCACATGGATCAATAAACAGA 58.516 36.000 0.00 0.00 0.00 3.41
375 376 4.340097 CCCTATGTGTGATAGTCCGTGTAA 59.660 45.833 0.00 0.00 0.00 2.41
383 384 4.471386 GGATATGGCCCTATGTGTGATAGT 59.529 45.833 5.13 0.00 0.00 2.12
389 390 0.324943 GCGGATATGGCCCTATGTGT 59.675 55.000 5.13 0.00 0.00 3.72
470 471 3.343941 TTTCAACCTTATCCGTCAGGG 57.656 47.619 0.00 0.00 38.33 4.45
550 551 4.368543 GGGCGGTCGACGGACTTT 62.369 66.667 25.91 0.00 42.97 2.66
558 559 3.822192 CTGATCACGGGCGGTCGA 61.822 66.667 0.00 0.00 0.00 4.20
586 587 2.094675 AGTTGGGAGGCGATCATTTTG 58.905 47.619 0.00 0.00 0.00 2.44
588 589 1.281867 TCAGTTGGGAGGCGATCATTT 59.718 47.619 0.00 0.00 0.00 2.32
604 605 1.000955 GACCGATGTGTGAACCTCAGT 59.999 52.381 0.00 0.00 0.00 3.41
650 651 1.533273 ACGATATGGACCGAGGGGG 60.533 63.158 0.00 0.00 43.62 5.40
667 668 5.648526 TCAACACTACTCTATCTCTGTGGAC 59.351 44.000 0.00 0.00 0.00 4.02
673 674 7.175293 AGACGTTTTCAACACTACTCTATCTCT 59.825 37.037 0.00 0.00 0.00 3.10
689 690 4.900684 TCCCATGATGTAAGACGTTTTCA 58.099 39.130 0.00 0.00 0.00 2.69
690 691 6.984474 TCTATCCCATGATGTAAGACGTTTTC 59.016 38.462 0.00 0.00 32.18 2.29
722 726 9.357652 CAAATGCTAGGTAAGTTAGTACGTAAA 57.642 33.333 0.00 0.00 0.00 2.01
735 739 2.500098 ACTCGCTCCAAATGCTAGGTAA 59.500 45.455 0.00 0.00 0.00 2.85
1005 1016 1.345741 GCTGCTGGTGAGGATGCTATA 59.654 52.381 0.00 0.00 0.00 1.31
1018 1029 1.027357 AGTGTTCTTGTTGCTGCTGG 58.973 50.000 0.00 0.00 0.00 4.85
1049 1060 2.591715 ACGGCGATGGGCTATTGC 60.592 61.111 16.62 14.26 44.17 3.56
1293 1310 3.782443 AGGCCGTCCGGAATGGTC 61.782 66.667 18.58 18.58 39.12 4.02
1595 1628 2.439964 GTCAGCTGCTTGACGTCTC 58.560 57.895 17.92 6.60 38.23 3.36
1716 2116 1.643292 GAGCGCGAAATGCAGCATA 59.357 52.632 12.10 0.00 46.97 3.14
2202 2627 0.321564 CCATCGTTGAGTTCCAGCCA 60.322 55.000 0.00 0.00 0.00 4.75
2277 2702 0.690762 ACTGGTATCGGCAGTTGGTT 59.309 50.000 0.00 0.00 0.00 3.67
2466 2891 1.592064 TCAGCGCATCAAAGTTGTCA 58.408 45.000 11.47 0.00 0.00 3.58
2531 2998 8.782339 ATAAAACTTAAAGCAGGTACGTACAT 57.218 30.769 26.02 17.76 0.00 2.29
2606 3081 4.196971 GACGGTAATTTGCTGGGATTACT 58.803 43.478 6.29 0.00 38.30 2.24
2613 3088 4.156922 TGTTATTGGACGGTAATTTGCTGG 59.843 41.667 0.00 0.00 0.00 4.85
2654 3129 8.504812 ACATTTGTTTTTGGCAAAAGATACTT 57.495 26.923 23.03 7.66 38.98 2.24
2659 3134 8.950210 TCAATTACATTTGTTTTTGGCAAAAGA 58.050 25.926 23.03 12.77 38.98 2.52
2660 3135 9.008289 GTCAATTACATTTGTTTTTGGCAAAAG 57.992 29.630 23.03 14.06 38.98 2.27
2673 3149 4.513198 AACCACGGGTCAATTACATTTG 57.487 40.909 0.00 0.00 33.12 2.32
2704 3180 8.301720 CGAGCCACCATATAATAACAACTACTA 58.698 37.037 0.00 0.00 0.00 1.82
2705 3181 7.152645 CGAGCCACCATATAATAACAACTACT 58.847 38.462 0.00 0.00 0.00 2.57
2706 3182 6.927381 ACGAGCCACCATATAATAACAACTAC 59.073 38.462 0.00 0.00 0.00 2.73
2707 3183 7.058023 ACGAGCCACCATATAATAACAACTA 57.942 36.000 0.00 0.00 0.00 2.24
2708 3184 5.925509 ACGAGCCACCATATAATAACAACT 58.074 37.500 0.00 0.00 0.00 3.16
2710 3186 7.502696 AGTAACGAGCCACCATATAATAACAA 58.497 34.615 0.00 0.00 0.00 2.83
2711 3187 7.058023 AGTAACGAGCCACCATATAATAACA 57.942 36.000 0.00 0.00 0.00 2.41
2712 3188 7.117379 GGAAGTAACGAGCCACCATATAATAAC 59.883 40.741 0.00 0.00 0.00 1.89
2713 3189 7.156673 GGAAGTAACGAGCCACCATATAATAA 58.843 38.462 0.00 0.00 0.00 1.40
2714 3190 6.295462 GGGAAGTAACGAGCCACCATATAATA 60.295 42.308 0.00 0.00 0.00 0.98
2715 3191 5.512576 GGGAAGTAACGAGCCACCATATAAT 60.513 44.000 0.00 0.00 0.00 1.28
2716 3192 4.202284 GGGAAGTAACGAGCCACCATATAA 60.202 45.833 0.00 0.00 0.00 0.98
2717 3193 3.322828 GGGAAGTAACGAGCCACCATATA 59.677 47.826 0.00 0.00 0.00 0.86
2718 3194 2.104281 GGGAAGTAACGAGCCACCATAT 59.896 50.000 0.00 0.00 0.00 1.78
2720 3196 0.252197 GGGAAGTAACGAGCCACCAT 59.748 55.000 0.00 0.00 0.00 3.55
2721 3197 1.122632 TGGGAAGTAACGAGCCACCA 61.123 55.000 0.00 0.00 0.00 4.17
2722 3198 0.391263 CTGGGAAGTAACGAGCCACC 60.391 60.000 0.00 0.00 0.00 4.61
2723 3199 0.606604 TCTGGGAAGTAACGAGCCAC 59.393 55.000 0.00 0.00 0.00 5.01
2724 3200 1.275291 CTTCTGGGAAGTAACGAGCCA 59.725 52.381 0.00 0.00 0.00 4.75
2725 3201 1.275573 ACTTCTGGGAAGTAACGAGCC 59.724 52.381 10.68 0.00 0.00 4.70
2726 3202 2.608268 GACTTCTGGGAAGTAACGAGC 58.392 52.381 12.11 0.00 0.00 5.03
2727 3203 2.486982 TCGACTTCTGGGAAGTAACGAG 59.513 50.000 12.11 3.93 0.00 4.18
2728 3204 2.507484 TCGACTTCTGGGAAGTAACGA 58.493 47.619 12.11 13.92 0.00 3.85
2729 3205 3.505464 ATCGACTTCTGGGAAGTAACG 57.495 47.619 12.11 12.19 0.00 3.18
2730 3206 5.074584 AGAATCGACTTCTGGGAAGTAAC 57.925 43.478 12.11 1.99 42.76 2.50
2743 3219 3.359950 AGGTACCGGTTTAGAATCGACT 58.640 45.455 15.04 0.00 0.00 4.18
2746 3222 2.724349 CGAGGTACCGGTTTAGAATCG 58.276 52.381 15.04 11.01 0.00 3.34
2807 3288 6.301169 ACACTTATTTTGAGGAGGGAGTAG 57.699 41.667 0.00 0.00 0.00 2.57
2813 3294 3.600388 AGCGACACTTATTTTGAGGAGG 58.400 45.455 0.00 0.00 0.00 4.30
2819 3300 7.591057 TGAAATGAAAGAGCGACACTTATTTTG 59.409 33.333 0.00 0.00 0.00 2.44
2820 3301 7.648142 TGAAATGAAAGAGCGACACTTATTTT 58.352 30.769 0.00 0.00 0.00 1.82
2821 3302 7.202016 TGAAATGAAAGAGCGACACTTATTT 57.798 32.000 0.00 0.00 0.00 1.40
2822 3303 6.801539 TGAAATGAAAGAGCGACACTTATT 57.198 33.333 0.00 0.00 0.00 1.40
2824 3305 6.612247 TTTGAAATGAAAGAGCGACACTTA 57.388 33.333 0.00 0.00 0.00 2.24
2827 3308 7.591426 ACTTATTTTGAAATGAAAGAGCGACAC 59.409 33.333 6.16 0.00 0.00 3.67
2828 3309 7.591057 CACTTATTTTGAAATGAAAGAGCGACA 59.409 33.333 6.16 0.00 0.00 4.35
2829 3310 7.591426 ACACTTATTTTGAAATGAAAGAGCGAC 59.409 33.333 6.16 0.00 0.00 5.19
2830 3311 7.648142 ACACTTATTTTGAAATGAAAGAGCGA 58.352 30.769 6.16 0.00 0.00 4.93
2831 3312 7.591057 TGACACTTATTTTGAAATGAAAGAGCG 59.409 33.333 6.16 0.00 0.00 5.03
2832 3313 8.694394 GTGACACTTATTTTGAAATGAAAGAGC 58.306 33.333 0.00 0.00 0.00 4.09
2880 3361 8.256611 AGTGTTGCTGACTTAGTACAATTATG 57.743 34.615 0.00 0.00 0.00 1.90
3058 3542 5.530171 ACATCATGGAGCATGTCAAGTTATC 59.470 40.000 0.00 0.00 41.98 1.75
3075 3559 4.742167 GTCGACCAAGAGATGTACATCATG 59.258 45.833 32.01 25.63 40.22 3.07
3076 3560 4.402474 TGTCGACCAAGAGATGTACATCAT 59.598 41.667 32.01 19.99 40.22 2.45
3077 3561 3.761752 TGTCGACCAAGAGATGTACATCA 59.238 43.478 32.01 10.11 40.22 3.07
3078 3562 4.371855 TGTCGACCAAGAGATGTACATC 57.628 45.455 25.47 25.47 38.09 3.06
3079 3563 4.801330 TTGTCGACCAAGAGATGTACAT 57.199 40.909 14.12 8.43 0.00 2.29
3082 3566 3.006430 TGCTTTGTCGACCAAGAGATGTA 59.994 43.478 28.15 3.35 33.75 2.29
3083 3567 2.224281 TGCTTTGTCGACCAAGAGATGT 60.224 45.455 28.15 0.00 33.75 3.06
3085 3569 2.839486 TGCTTTGTCGACCAAGAGAT 57.161 45.000 28.15 0.00 33.75 2.75
3086 3570 2.839486 ATGCTTTGTCGACCAAGAGA 57.161 45.000 28.15 16.06 33.75 3.10
3087 3571 2.807967 TGAATGCTTTGTCGACCAAGAG 59.192 45.455 28.15 14.73 33.75 2.85
3088 3572 2.844946 TGAATGCTTTGTCGACCAAGA 58.155 42.857 28.15 15.76 33.75 3.02
3089 3573 3.495193 CATGAATGCTTTGTCGACCAAG 58.505 45.455 21.72 21.72 33.75 3.61
3090 3574 2.228582 CCATGAATGCTTTGTCGACCAA 59.771 45.455 14.12 7.58 0.00 3.67
3091 3575 1.811965 CCATGAATGCTTTGTCGACCA 59.188 47.619 14.12 3.67 0.00 4.02
3092 3576 2.083774 TCCATGAATGCTTTGTCGACC 58.916 47.619 14.12 0.00 0.00 4.79
3093 3577 3.002791 TCTCCATGAATGCTTTGTCGAC 58.997 45.455 9.11 9.11 0.00 4.20
3094 3578 3.333029 TCTCCATGAATGCTTTGTCGA 57.667 42.857 0.00 0.00 0.00 4.20
3095 3579 3.624410 TCATCTCCATGAATGCTTTGTCG 59.376 43.478 0.00 0.00 35.99 4.35
3096 3580 5.298527 TCATCATCTCCATGAATGCTTTGTC 59.701 40.000 0.00 0.00 42.53 3.18
3097 3581 5.198207 TCATCATCTCCATGAATGCTTTGT 58.802 37.500 0.00 0.00 42.53 2.83
3098 3582 5.767816 TCATCATCTCCATGAATGCTTTG 57.232 39.130 0.00 0.00 42.53 2.77
3099 3583 6.148976 CGTATCATCATCTCCATGAATGCTTT 59.851 38.462 0.00 0.00 42.53 3.51
3100 3584 5.642491 CGTATCATCATCTCCATGAATGCTT 59.358 40.000 0.00 0.00 42.53 3.91
3101 3585 5.176592 CGTATCATCATCTCCATGAATGCT 58.823 41.667 0.00 0.00 42.53 3.79
3102 3586 4.934001 ACGTATCATCATCTCCATGAATGC 59.066 41.667 0.00 0.00 42.53 3.56
3103 3587 8.713737 AATACGTATCATCATCTCCATGAATG 57.286 34.615 8.86 0.00 42.53 2.67
3104 3588 8.756927 AGAATACGTATCATCATCTCCATGAAT 58.243 33.333 8.86 0.00 42.53 2.57
3105 3589 8.127150 AGAATACGTATCATCATCTCCATGAA 57.873 34.615 8.86 0.00 42.53 2.57
3106 3590 7.709149 AGAATACGTATCATCATCTCCATGA 57.291 36.000 8.86 0.00 43.45 3.07
3107 3591 8.768957 AAAGAATACGTATCATCATCTCCATG 57.231 34.615 8.86 0.00 0.00 3.66
3108 3592 9.212641 CAAAAGAATACGTATCATCATCTCCAT 57.787 33.333 8.86 0.00 0.00 3.41
3109 3593 7.657354 CCAAAAGAATACGTATCATCATCTCCA 59.343 37.037 8.86 0.00 0.00 3.86
3110 3594 7.118390 CCCAAAAGAATACGTATCATCATCTCC 59.882 40.741 8.86 0.00 0.00 3.71
3111 3595 7.118390 CCCCAAAAGAATACGTATCATCATCTC 59.882 40.741 8.86 0.74 0.00 2.75
3112 3596 6.936900 CCCCAAAAGAATACGTATCATCATCT 59.063 38.462 8.86 4.72 0.00 2.90
3113 3597 6.348540 GCCCCAAAAGAATACGTATCATCATC 60.349 42.308 8.86 2.25 0.00 2.92
3114 3598 5.473504 GCCCCAAAAGAATACGTATCATCAT 59.526 40.000 8.86 0.00 0.00 2.45
3115 3599 4.819630 GCCCCAAAAGAATACGTATCATCA 59.180 41.667 8.86 0.00 0.00 3.07
3116 3600 4.084013 CGCCCCAAAAGAATACGTATCATC 60.084 45.833 8.86 3.78 0.00 2.92
3117 3601 3.813166 CGCCCCAAAAGAATACGTATCAT 59.187 43.478 8.86 0.00 0.00 2.45
3118 3602 3.199677 CGCCCCAAAAGAATACGTATCA 58.800 45.455 8.86 0.00 0.00 2.15
3119 3603 3.001939 CACGCCCCAAAAGAATACGTATC 59.998 47.826 8.86 2.90 0.00 2.24
3120 3604 2.940410 CACGCCCCAAAAGAATACGTAT 59.060 45.455 1.14 1.14 0.00 3.06
3121 3605 2.289569 ACACGCCCCAAAAGAATACGTA 60.290 45.455 0.00 0.00 0.00 3.57
3122 3606 1.161843 CACGCCCCAAAAGAATACGT 58.838 50.000 0.00 0.00 0.00 3.57
3123 3607 1.135803 CACACGCCCCAAAAGAATACG 60.136 52.381 0.00 0.00 0.00 3.06
3124 3608 1.402325 GCACACGCCCCAAAAGAATAC 60.402 52.381 0.00 0.00 0.00 1.89
3125 3609 0.885196 GCACACGCCCCAAAAGAATA 59.115 50.000 0.00 0.00 0.00 1.75
3126 3610 1.665442 GCACACGCCCCAAAAGAAT 59.335 52.632 0.00 0.00 0.00 2.40
3127 3611 2.840066 CGCACACGCCCCAAAAGAA 61.840 57.895 0.00 0.00 33.11 2.52
3128 3612 2.661840 TACGCACACGCCCCAAAAGA 62.662 55.000 0.00 0.00 45.53 2.52
3129 3613 1.582610 ATACGCACACGCCCCAAAAG 61.583 55.000 0.00 0.00 45.53 2.27
3130 3614 1.601197 ATACGCACACGCCCCAAAA 60.601 52.632 0.00 0.00 45.53 2.44
3131 3615 2.032834 ATACGCACACGCCCCAAA 59.967 55.556 0.00 0.00 45.53 3.28
3132 3616 2.744318 CATACGCACACGCCCCAA 60.744 61.111 0.00 0.00 45.53 4.12
3145 3629 2.433491 TCACACCGTGCGGCATAC 60.433 61.111 5.72 0.00 39.32 2.39
3146 3630 1.955495 ATCTCACACCGTGCGGCATA 61.955 55.000 5.72 0.00 39.32 3.14
3147 3631 3.315142 ATCTCACACCGTGCGGCAT 62.315 57.895 5.72 0.00 39.32 4.40
3148 3632 4.002506 ATCTCACACCGTGCGGCA 62.003 61.111 10.87 0.00 39.32 5.69
3149 3633 3.490759 CATCTCACACCGTGCGGC 61.491 66.667 10.87 0.00 39.32 6.53
3150 3634 3.490759 GCATCTCACACCGTGCGG 61.491 66.667 9.29 9.29 42.03 5.69
3151 3635 3.490759 GGCATCTCACACCGTGCG 61.491 66.667 0.00 0.00 38.43 5.34
3152 3636 1.965930 TTGGCATCTCACACCGTGC 60.966 57.895 0.00 0.00 36.88 5.34
3153 3637 0.884259 TGTTGGCATCTCACACCGTG 60.884 55.000 0.00 0.00 34.45 4.94
3154 3638 0.884704 GTGTTGGCATCTCACACCGT 60.885 55.000 8.63 0.00 33.04 4.83
3155 3639 1.868997 GTGTTGGCATCTCACACCG 59.131 57.895 8.63 0.00 33.04 4.94
3156 3640 0.884704 ACGTGTTGGCATCTCACACC 60.885 55.000 13.05 0.00 33.04 4.16
3157 3641 0.512952 GACGTGTTGGCATCTCACAC 59.487 55.000 9.58 9.58 33.04 3.82
3158 3642 0.105778 TGACGTGTTGGCATCTCACA 59.894 50.000 14.72 2.83 33.04 3.58
3159 3643 1.225855 TTGACGTGTTGGCATCTCAC 58.774 50.000 0.00 0.00 0.00 3.51
3160 3644 1.960417 TTTGACGTGTTGGCATCTCA 58.040 45.000 0.00 0.00 0.00 3.27
3161 3645 2.290641 ACTTTTGACGTGTTGGCATCTC 59.709 45.455 0.00 0.00 0.00 2.75
3162 3646 2.297701 ACTTTTGACGTGTTGGCATCT 58.702 42.857 0.00 0.00 0.00 2.90
3163 3647 2.774439 ACTTTTGACGTGTTGGCATC 57.226 45.000 0.00 0.00 0.00 3.91
3164 3648 4.757657 TGTATACTTTTGACGTGTTGGCAT 59.242 37.500 4.17 0.00 0.00 4.40
3165 3649 4.127907 TGTATACTTTTGACGTGTTGGCA 58.872 39.130 4.17 0.00 0.00 4.92
3166 3650 4.735662 TGTATACTTTTGACGTGTTGGC 57.264 40.909 4.17 0.00 0.00 4.52
3167 3651 5.410132 TCCATGTATACTTTTGACGTGTTGG 59.590 40.000 4.17 0.00 0.00 3.77
3168 3652 6.367695 TCTCCATGTATACTTTTGACGTGTTG 59.632 38.462 4.17 0.00 0.00 3.33
3169 3653 6.460781 TCTCCATGTATACTTTTGACGTGTT 58.539 36.000 4.17 0.00 0.00 3.32
3170 3654 6.032956 TCTCCATGTATACTTTTGACGTGT 57.967 37.500 4.17 0.00 0.00 4.49
3171 3655 6.756542 TCATCTCCATGTATACTTTTGACGTG 59.243 38.462 4.17 0.00 0.00 4.49
3172 3656 6.873997 TCATCTCCATGTATACTTTTGACGT 58.126 36.000 4.17 0.00 0.00 4.34
3173 3657 7.653311 TCATCATCTCCATGTATACTTTTGACG 59.347 37.037 4.17 0.00 0.00 4.35
3174 3658 8.893219 TCATCATCTCCATGTATACTTTTGAC 57.107 34.615 4.17 0.00 0.00 3.18
3177 3661 9.950496 GGTATCATCATCTCCATGTATACTTTT 57.050 33.333 4.17 0.00 30.38 2.27
3178 3662 8.543774 GGGTATCATCATCTCCATGTATACTTT 58.456 37.037 4.17 0.00 30.38 2.66
3179 3663 7.126421 GGGGTATCATCATCTCCATGTATACTT 59.874 40.741 4.17 0.00 30.38 2.24
3180 3664 6.613271 GGGGTATCATCATCTCCATGTATACT 59.387 42.308 4.17 0.00 30.38 2.12
3181 3665 6.183361 GGGGGTATCATCATCTCCATGTATAC 60.183 46.154 0.00 0.00 0.00 1.47
3182 3666 5.905331 GGGGGTATCATCATCTCCATGTATA 59.095 44.000 0.00 0.00 0.00 1.47
3183 3667 4.723789 GGGGGTATCATCATCTCCATGTAT 59.276 45.833 0.00 0.00 0.00 2.29
3184 3668 4.104086 GGGGGTATCATCATCTCCATGTA 58.896 47.826 0.00 0.00 0.00 2.29
3185 3669 2.915604 GGGGGTATCATCATCTCCATGT 59.084 50.000 0.00 0.00 0.00 3.21
3186 3670 3.187942 AGGGGGTATCATCATCTCCATG 58.812 50.000 0.00 0.00 0.00 3.66
3187 3671 3.458831 GAGGGGGTATCATCATCTCCAT 58.541 50.000 0.00 0.00 0.00 3.41
3188 3672 2.495383 GGAGGGGGTATCATCATCTCCA 60.495 54.545 0.00 0.00 39.14 3.86
3189 3673 2.192263 GGAGGGGGTATCATCATCTCC 58.808 57.143 0.00 0.00 33.57 3.71
3190 3674 2.192263 GGGAGGGGGTATCATCATCTC 58.808 57.143 0.00 0.00 0.00 2.75
3191 3675 1.203492 GGGGAGGGGGTATCATCATCT 60.203 57.143 0.00 0.00 0.00 2.90
3192 3676 1.290134 GGGGAGGGGGTATCATCATC 58.710 60.000 0.00 0.00 0.00 2.92
3193 3677 0.577916 TGGGGAGGGGGTATCATCAT 59.422 55.000 0.00 0.00 0.00 2.45
3194 3678 0.401395 GTGGGGAGGGGGTATCATCA 60.401 60.000 0.00 0.00 0.00 3.07
3195 3679 0.401395 TGTGGGGAGGGGGTATCATC 60.401 60.000 0.00 0.00 0.00 2.92
3196 3680 0.047176 TTGTGGGGAGGGGGTATCAT 59.953 55.000 0.00 0.00 0.00 2.45
3197 3681 0.917333 GTTGTGGGGAGGGGGTATCA 60.917 60.000 0.00 0.00 0.00 2.15
3198 3682 1.642513 GGTTGTGGGGAGGGGGTATC 61.643 65.000 0.00 0.00 0.00 2.24
3199 3683 1.621514 GGTTGTGGGGAGGGGGTAT 60.622 63.158 0.00 0.00 0.00 2.73
3200 3684 2.204182 GGTTGTGGGGAGGGGGTA 60.204 66.667 0.00 0.00 0.00 3.69
3201 3685 4.217266 AGGTTGTGGGGAGGGGGT 62.217 66.667 0.00 0.00 0.00 4.95
3202 3686 3.339093 GAGGTTGTGGGGAGGGGG 61.339 72.222 0.00 0.00 0.00 5.40
3203 3687 3.339093 GGAGGTTGTGGGGAGGGG 61.339 72.222 0.00 0.00 0.00 4.79
3204 3688 3.339093 GGGAGGTTGTGGGGAGGG 61.339 72.222 0.00 0.00 0.00 4.30
3205 3689 3.339093 GGGGAGGTTGTGGGGAGG 61.339 72.222 0.00 0.00 0.00 4.30
3206 3690 1.509548 ATTGGGGAGGTTGTGGGGAG 61.510 60.000 0.00 0.00 0.00 4.30
3207 3691 1.077298 AATTGGGGAGGTTGTGGGGA 61.077 55.000 0.00 0.00 0.00 4.81
3208 3692 0.904394 CAATTGGGGAGGTTGTGGGG 60.904 60.000 0.00 0.00 0.00 4.96
3209 3693 0.904394 CCAATTGGGGAGGTTGTGGG 60.904 60.000 17.36 0.00 0.00 4.61
3210 3694 0.114168 TCCAATTGGGGAGGTTGTGG 59.886 55.000 24.29 0.00 37.22 4.17
3211 3695 2.236489 ATCCAATTGGGGAGGTTGTG 57.764 50.000 24.29 0.00 41.08 3.33
3212 3696 3.531397 TGATATCCAATTGGGGAGGTTGT 59.469 43.478 24.29 2.60 41.08 3.32
3213 3697 4.183223 TGATATCCAATTGGGGAGGTTG 57.817 45.455 24.29 0.00 41.08 3.77
3214 3698 4.419875 TCATGATATCCAATTGGGGAGGTT 59.580 41.667 24.29 4.02 41.08 3.50
3215 3699 3.989558 TCATGATATCCAATTGGGGAGGT 59.010 43.478 24.29 6.56 41.08 3.85
3216 3700 4.662966 TCATGATATCCAATTGGGGAGG 57.337 45.455 24.29 8.10 41.08 4.30
3217 3701 5.638133 AGTTCATGATATCCAATTGGGGAG 58.362 41.667 24.29 7.92 41.08 4.30
3218 3702 5.668135 AGTTCATGATATCCAATTGGGGA 57.332 39.130 24.29 12.75 42.21 4.81
3219 3703 6.736110 AAAGTTCATGATATCCAATTGGGG 57.264 37.500 24.29 0.00 37.22 4.96
3220 3704 7.558604 ACAAAAGTTCATGATATCCAATTGGG 58.441 34.615 24.29 6.48 35.41 4.12
3226 3710 9.904198 TCTCATTACAAAAGTTCATGATATCCA 57.096 29.630 0.00 0.00 0.00 3.41
3230 3714 9.087424 CGTCTCTCATTACAAAAGTTCATGATA 57.913 33.333 0.00 0.00 0.00 2.15
3231 3715 7.604164 ACGTCTCTCATTACAAAAGTTCATGAT 59.396 33.333 0.00 0.00 0.00 2.45
3232 3716 6.929049 ACGTCTCTCATTACAAAAGTTCATGA 59.071 34.615 0.00 0.00 0.00 3.07
3233 3717 7.121974 ACGTCTCTCATTACAAAAGTTCATG 57.878 36.000 0.00 0.00 0.00 3.07
3234 3718 7.730364 AACGTCTCTCATTACAAAAGTTCAT 57.270 32.000 0.00 0.00 0.00 2.57
3235 3719 7.279090 TCAAACGTCTCTCATTACAAAAGTTCA 59.721 33.333 0.00 0.00 0.00 3.18
3236 3720 7.627340 TCAAACGTCTCTCATTACAAAAGTTC 58.373 34.615 0.00 0.00 0.00 3.01
3237 3721 7.548196 TCAAACGTCTCTCATTACAAAAGTT 57.452 32.000 0.00 0.00 0.00 2.66
3238 3722 7.548196 TTCAAACGTCTCTCATTACAAAAGT 57.452 32.000 0.00 0.00 0.00 2.66
3239 3723 7.587757 CCTTTCAAACGTCTCTCATTACAAAAG 59.412 37.037 0.00 0.00 0.00 2.27
3240 3724 7.066525 ACCTTTCAAACGTCTCTCATTACAAAA 59.933 33.333 0.00 0.00 0.00 2.44
3241 3725 6.540914 ACCTTTCAAACGTCTCTCATTACAAA 59.459 34.615 0.00 0.00 0.00 2.83
3242 3726 6.018262 CACCTTTCAAACGTCTCTCATTACAA 60.018 38.462 0.00 0.00 0.00 2.41
3243 3727 5.465390 CACCTTTCAAACGTCTCTCATTACA 59.535 40.000 0.00 0.00 0.00 2.41
3244 3728 5.465724 ACACCTTTCAAACGTCTCTCATTAC 59.534 40.000 0.00 0.00 0.00 1.89
3245 3729 5.607477 ACACCTTTCAAACGTCTCTCATTA 58.393 37.500 0.00 0.00 0.00 1.90
3246 3730 4.451900 ACACCTTTCAAACGTCTCTCATT 58.548 39.130 0.00 0.00 0.00 2.57
3247 3731 4.073293 ACACCTTTCAAACGTCTCTCAT 57.927 40.909 0.00 0.00 0.00 2.90
3248 3732 3.536956 ACACCTTTCAAACGTCTCTCA 57.463 42.857 0.00 0.00 0.00 3.27
3249 3733 5.978934 TTTACACCTTTCAAACGTCTCTC 57.021 39.130 0.00 0.00 0.00 3.20
3250 3734 5.878669 ACTTTTACACCTTTCAAACGTCTCT 59.121 36.000 0.00 0.00 0.00 3.10
3251 3735 6.036844 AGACTTTTACACCTTTCAAACGTCTC 59.963 38.462 0.00 0.00 36.57 3.36
3252 3736 5.878669 AGACTTTTACACCTTTCAAACGTCT 59.121 36.000 0.00 0.00 36.51 4.18
3253 3737 6.115450 AGACTTTTACACCTTTCAAACGTC 57.885 37.500 0.00 0.00 33.19 4.34
3254 3738 6.319399 CAAGACTTTTACACCTTTCAAACGT 58.681 36.000 0.00 0.00 0.00 3.99
3255 3739 5.229260 GCAAGACTTTTACACCTTTCAAACG 59.771 40.000 0.00 0.00 0.00 3.60
3270 3754 6.040166 ACAAATCAGATGTTGAGCAAGACTTT 59.960 34.615 10.52 0.00 39.68 2.66
3346 3830 5.070446 CCTCCACTGGCTACAAGTATTATGA 59.930 44.000 0.00 0.00 0.00 2.15
3448 3932 3.134127 GGGCGACATGGGTCTTGC 61.134 66.667 0.00 0.00 42.05 4.01
3449 3933 1.303236 TTGGGCGACATGGGTCTTG 60.303 57.895 0.00 0.00 42.05 3.02
3473 3957 0.613777 CTCAGGGAAAGTAAGCCGGT 59.386 55.000 1.90 0.00 0.00 5.28
3476 3960 2.039879 TCAACCTCAGGGAAAGTAAGCC 59.960 50.000 0.00 0.00 36.25 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.