Multiple sequence alignment - TraesCS6D01G020700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G020700 chr6D 100.000 6683 0 0 775 7457 8156024 8149342 0.000000e+00 12342.0
1 TraesCS6D01G020700 chr6D 85.030 668 87 9 4907 5569 414624172 414623513 0.000000e+00 667.0
2 TraesCS6D01G020700 chr6D 80.454 793 132 15 1243 2028 414625471 414624695 1.080000e-162 584.0
3 TraesCS6D01G020700 chr6D 100.000 278 0 0 1 278 8156798 8156521 1.430000e-141 514.0
4 TraesCS6D01G020700 chr6D 90.062 161 15 1 2658 2817 44257463 44257623 2.730000e-49 207.0
5 TraesCS6D01G020700 chr6D 100.000 29 0 0 2446 2474 124503434 124503462 4.000000e-03 54.7
6 TraesCS6D01G020700 chr6B 93.824 2105 96 18 4608 6693 15132002 15134091 0.000000e+00 3136.0
7 TraesCS6D01G020700 chr6B 88.202 1958 112 52 775 2659 15128141 15130052 0.000000e+00 2226.0
8 TraesCS6D01G020700 chr6B 79.389 1572 287 30 4882 6430 625242930 625244487 0.000000e+00 1074.0
9 TraesCS6D01G020700 chr6B 80.380 790 132 15 1240 2022 625241660 625242433 5.020000e-161 579.0
10 TraesCS6D01G020700 chr6B 95.925 319 10 1 6779 7097 15134221 15134536 1.430000e-141 514.0
11 TraesCS6D01G020700 chr6B 83.424 549 47 22 3691 4223 15131223 15131743 3.150000e-128 470.0
12 TraesCS6D01G020700 chr6B 93.233 266 15 2 7085 7350 15135193 15135455 9.070000e-104 388.0
13 TraesCS6D01G020700 chr6B 90.288 278 26 1 1 277 15127437 15127714 5.500000e-96 363.0
14 TraesCS6D01G020700 chr6B 90.517 116 9 1 6698 6811 15137171 15137286 1.300000e-32 152.0
15 TraesCS6D01G020700 chr6B 91.919 99 7 1 2851 2948 15130049 15130147 3.630000e-28 137.0
16 TraesCS6D01G020700 chr6B 96.078 51 2 0 6732 6782 15134090 15134140 4.790000e-12 84.2
17 TraesCS6D01G020700 chr6B 90.909 44 2 2 4216 4259 655769067 655769026 2.910000e-04 58.4
18 TraesCS6D01G020700 chr6B 90.909 44 2 2 4216 4259 655850614 655850573 2.910000e-04 58.4
19 TraesCS6D01G020700 chr6A 91.119 2207 119 34 4648 6811 8696649 8694477 0.000000e+00 2918.0
20 TraesCS6D01G020700 chr6A 93.259 1528 62 20 775 2269 8700242 8698723 0.000000e+00 2213.0
21 TraesCS6D01G020700 chr6A 80.809 1433 228 36 4882 6286 559524914 559526327 0.000000e+00 1079.0
22 TraesCS6D01G020700 chr6A 80.759 790 129 15 1240 2022 559523697 559524470 4.980000e-166 595.0
23 TraesCS6D01G020700 chr6A 84.323 606 60 21 3635 4223 8697555 8696968 1.820000e-155 560.0
24 TraesCS6D01G020700 chr6A 84.768 302 25 13 3206 3500 8697965 8697678 4.400000e-72 283.0
25 TraesCS6D01G020700 chr6A 88.835 206 22 1 7 212 8701073 8700869 1.240000e-62 252.0
26 TraesCS6D01G020700 chr6A 96.471 85 1 2 3038 3120 8698091 8698007 1.010000e-28 139.0
27 TraesCS6D01G020700 chr6A 75.325 385 39 30 2297 2644 8698618 8698253 4.690000e-27 134.0
28 TraesCS6D01G020700 chr6A 92.537 67 2 1 1714 1780 13447901 13447964 7.970000e-15 93.5
29 TraesCS6D01G020700 chr7A 87.073 1346 153 9 5116 6458 43181950 43180623 0.000000e+00 1502.0
30 TraesCS6D01G020700 chr7A 86.654 1019 118 12 1160 2173 43185326 43184321 0.000000e+00 1112.0
31 TraesCS6D01G020700 chr7A 87.938 257 31 0 4861 5117 43182328 43182072 3.380000e-78 303.0
32 TraesCS6D01G020700 chr7A 84.848 231 30 5 4613 4840 263716185 263715957 2.090000e-55 228.0
33 TraesCS6D01G020700 chr7A 88.889 162 18 0 2656 2817 162572346 162572185 4.560000e-47 200.0
34 TraesCS6D01G020700 chr7D 86.299 1343 163 8 5116 6455 43215694 43217018 0.000000e+00 1441.0
35 TraesCS6D01G020700 chr7D 87.209 1032 114 11 1154 2173 43212505 43213530 0.000000e+00 1158.0
36 TraesCS6D01G020700 chr7D 87.938 257 31 0 4861 5117 43215336 43215592 3.380000e-78 303.0
37 TraesCS6D01G020700 chr7D 100.000 28 0 0 4220 4247 602917003 602916976 1.400000e-02 52.8
38 TraesCS6D01G020700 chr4A 86.076 1343 166 8 5116 6455 651368887 651370211 0.000000e+00 1424.0
39 TraesCS6D01G020700 chr4A 87.703 984 109 8 1194 2171 651366096 651367073 0.000000e+00 1136.0
40 TraesCS6D01G020700 chr4A 89.883 257 26 0 4861 5117 651368519 651368775 1.550000e-86 331.0
41 TraesCS6D01G020700 chr1A 83.706 313 38 8 1437 1745 90488963 90488660 4.400000e-72 283.0
42 TraesCS6D01G020700 chr1A 87.500 168 20 1 2651 2817 569384711 569384544 7.640000e-45 193.0
43 TraesCS6D01G020700 chr3D 88.554 166 17 2 2654 2817 434024804 434024969 4.560000e-47 200.0
44 TraesCS6D01G020700 chr3B 88.554 166 18 1 2653 2817 576172331 576172166 4.560000e-47 200.0
45 TraesCS6D01G020700 chr4B 88.957 163 13 5 2658 2819 413013378 413013220 5.900000e-46 196.0
46 TraesCS6D01G020700 chrUn 87.952 166 18 2 2654 2817 63609016 63609181 2.120000e-45 195.0
47 TraesCS6D01G020700 chrUn 100.000 29 0 0 2446 2474 86517039 86517067 4.000000e-03 54.7
48 TraesCS6D01G020700 chrUn 100.000 29 0 0 2446 2474 206784557 206784585 4.000000e-03 54.7
49 TraesCS6D01G020700 chr4D 88.344 163 18 1 2656 2817 403293175 403293337 2.120000e-45 195.0
50 TraesCS6D01G020700 chr4D 100.000 29 0 0 2446 2474 123289614 123289642 4.000000e-03 54.7
51 TraesCS6D01G020700 chr4D 100.000 29 0 0 2446 2474 123321384 123321412 4.000000e-03 54.7
52 TraesCS6D01G020700 chr2D 88.272 162 18 1 2656 2817 170628149 170627989 7.640000e-45 193.0
53 TraesCS6D01G020700 chr3A 81.053 190 30 6 4617 4804 656255884 656255699 6.030000e-31 147.0
54 TraesCS6D01G020700 chr3A 81.053 190 30 6 4617 4804 656340320 656340135 6.030000e-31 147.0
55 TraesCS6D01G020700 chr2B 79.545 176 33 3 4607 4780 606775276 606775450 1.020000e-23 122.0
56 TraesCS6D01G020700 chr2B 94.444 36 2 0 2446 2481 457369572 457369537 1.000000e-03 56.5
57 TraesCS6D01G020700 chr1D 81.560 141 20 5 4457 4594 10254010 10253873 2.200000e-20 111.0
58 TraesCS6D01G020700 chr5D 89.552 67 7 0 4614 4680 533258219 533258285 1.330000e-12 86.1
59 TraesCS6D01G020700 chr5B 88.732 71 7 1 4614 4684 673287097 673287166 1.330000e-12 86.1
60 TraesCS6D01G020700 chr5A 89.394 66 7 0 4606 4671 42114225 42114160 4.790000e-12 84.2
61 TraesCS6D01G020700 chr1B 100.000 32 0 0 2446 2477 672568191 672568160 8.080000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G020700 chr6D 8149342 8156798 7456 True 6428.000000 12342 100.000000 1 7457 2 chr6D.!!$R1 7456
1 TraesCS6D01G020700 chr6D 414623513 414625471 1958 True 625.500000 667 82.742000 1243 5569 2 chr6D.!!$R2 4326
2 TraesCS6D01G020700 chr6B 15127437 15137286 9849 False 830.022222 3136 91.490000 1 7350 9 chr6B.!!$F1 7349
3 TraesCS6D01G020700 chr6B 625241660 625244487 2827 False 826.500000 1074 79.884500 1240 6430 2 chr6B.!!$F2 5190
4 TraesCS6D01G020700 chr6A 8694477 8701073 6596 True 928.428571 2918 87.728571 7 6811 7 chr6A.!!$R1 6804
5 TraesCS6D01G020700 chr6A 559523697 559526327 2630 False 837.000000 1079 80.784000 1240 6286 2 chr6A.!!$F2 5046
6 TraesCS6D01G020700 chr7A 43180623 43185326 4703 True 972.333333 1502 87.221667 1160 6458 3 chr7A.!!$R3 5298
7 TraesCS6D01G020700 chr7D 43212505 43217018 4513 False 967.333333 1441 87.148667 1154 6455 3 chr7D.!!$F1 5301
8 TraesCS6D01G020700 chr4A 651366096 651370211 4115 False 963.666667 1424 87.887333 1194 6455 3 chr4A.!!$F1 5261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.744874 TCTCCCGAGAGTTAATGGCG 59.255 55.000 0.00 0.00 41.26 5.69 F
992 1130 1.088306 GTCCCACGACACAAACACAA 58.912 50.000 0.00 0.00 38.99 3.33 F
2326 2737 0.174845 ATGCTTCCGTACGCTAGCAA 59.825 50.000 31.93 21.28 45.66 3.91 F
3341 3914 0.096976 CACAATTCGATCGTGTGGCC 59.903 55.000 22.75 0.00 39.17 5.36 F
4095 5132 0.315251 TCTGTGCTCCGTGAGAACTG 59.685 55.000 11.79 11.21 0.00 3.16 F
4097 5134 0.315251 TGTGCTCCGTGAGAACTGAG 59.685 55.000 11.79 0.00 0.00 3.35 F
4099 5136 1.000163 GTGCTCCGTGAGAACTGAGAA 60.000 52.381 5.24 0.00 0.00 2.87 F
5865 8660 1.068083 CATGGTGGACGAGATCGGG 59.932 63.158 7.22 0.00 44.95 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1176 1320 1.366854 CGTCATCGTCCTCGTCCTCA 61.367 60.000 0.00 0.00 38.33 3.86 R
2878 3344 0.031994 CTTCTTGCACCCGGTTTTGG 59.968 55.000 0.00 0.00 0.00 3.28 R
3539 4115 0.031994 GCACATGTGAACCCAACCAC 59.968 55.000 29.80 3.51 0.00 4.16 R
4813 6821 0.393808 GATACCCCATGTGTTGCCGT 60.394 55.000 0.00 0.00 0.00 5.68 R
5301 8069 1.623081 CGACGGTGTTCATGAACGGG 61.623 60.000 28.55 22.27 43.94 5.28 R
5598 8366 3.844090 GCGAGGTGGGAGAGGCTC 61.844 72.222 6.34 6.34 0.00 4.70 R
6273 9071 2.995574 AACCTCCACCCGTCCTCG 60.996 66.667 0.00 0.00 0.00 4.63 R
7390 10967 0.034960 TAGCGGCTTATTTGGTGGCA 60.035 50.000 8.26 0.00 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 1.014352 GTAGGCTAACATTGCACGGG 58.986 55.000 0.00 0.00 0.00 5.28
74 75 1.302431 CATTGCACGGGTGTCCTCA 60.302 57.895 0.25 0.00 0.00 3.86
142 143 1.587547 GGATTGTTGCTCGATCTCCC 58.412 55.000 8.72 0.00 37.18 4.30
156 157 0.744874 TCTCCCGAGAGTTAATGGCG 59.255 55.000 0.00 0.00 41.26 5.69
232 233 4.697756 CCGCTCCCGAGTTTGCCA 62.698 66.667 0.00 0.00 36.29 4.92
237 238 1.533625 CTCCCGAGTTTGCCAATGAA 58.466 50.000 0.00 0.00 0.00 2.57
277 279 3.449227 TACGAGGGAGCGCCACTG 61.449 66.667 9.31 0.00 35.15 3.66
937 1068 1.544825 CCTGCCGGTTCCTTCTCTCA 61.545 60.000 1.90 0.00 0.00 3.27
992 1130 1.088306 GTCCCACGACACAAACACAA 58.912 50.000 0.00 0.00 38.99 3.33
993 1131 1.469308 GTCCCACGACACAAACACAAA 59.531 47.619 0.00 0.00 38.99 2.83
1008 1146 3.683937 AAACACAGCATGGCCGCC 61.684 61.111 1.04 1.04 43.62 6.13
1011 1149 4.790962 CACAGCATGGCCGCCTCT 62.791 66.667 11.61 2.28 43.62 3.69
1182 1326 1.332375 CTCGTCGAGGAAGATGAGGAC 59.668 57.143 14.68 0.00 45.68 3.85
1191 1338 1.950909 GAAGATGAGGACGAGGACGAT 59.049 52.381 0.00 0.00 42.66 3.73
1317 1464 4.446413 ATCGACCGCAACCCGTCC 62.446 66.667 0.00 0.00 34.38 4.79
1326 1473 3.081409 AACCCGTCCCTGATCCGG 61.081 66.667 0.00 0.00 41.37 5.14
1695 1842 3.576356 CGGTGCGGCATCATGTCC 61.576 66.667 14.45 4.50 0.00 4.02
1696 1843 2.124570 GGTGCGGCATCATGTCCT 60.125 61.111 8.68 0.00 0.00 3.85
1697 1844 2.182842 GGTGCGGCATCATGTCCTC 61.183 63.158 8.68 0.00 0.00 3.71
2220 2537 4.866921 TCAGAAAAAGTGAGACGATCGAA 58.133 39.130 24.34 0.98 0.00 3.71
2222 2539 4.917998 CAGAAAAAGTGAGACGATCGAAGA 59.082 41.667 24.34 0.00 45.75 2.87
2223 2540 5.574830 CAGAAAAAGTGAGACGATCGAAGAT 59.425 40.000 24.34 0.00 45.12 2.40
2225 2542 6.970043 AGAAAAAGTGAGACGATCGAAGATAG 59.030 38.462 24.34 0.00 45.12 2.08
2227 2544 6.438259 AAAGTGAGACGATCGAAGATAGAA 57.562 37.500 24.34 0.00 45.12 2.10
2269 2603 8.139350 TCTTTGTCTTGGTATATACGTACATGG 58.861 37.037 6.79 5.06 0.00 3.66
2283 2617 2.514592 ATGGCGCCAAGGATGACG 60.515 61.111 36.33 0.00 35.33 4.35
2326 2737 0.174845 ATGCTTCCGTACGCTAGCAA 59.825 50.000 31.93 21.28 45.66 3.91
2333 2744 0.570734 CGTACGCTAGCAATTGACCG 59.429 55.000 16.45 7.68 0.00 4.79
2381 2807 5.220662 CCATGTTTTATGCTCACGTAGGAAG 60.221 44.000 0.00 0.00 0.00 3.46
2386 2812 7.174253 TGTTTTATGCTCACGTAGGAAGAAAAT 59.826 33.333 0.00 0.00 31.59 1.82
2387 2813 6.662414 TTATGCTCACGTAGGAAGAAAATG 57.338 37.500 0.00 0.00 0.00 2.32
2431 2857 1.485480 CTCAGCACCAGGACATCTGAT 59.515 52.381 0.00 0.00 46.18 2.90
2476 2914 6.647334 TTTCTTACTTGATTGACATTGGCA 57.353 33.333 0.00 0.00 0.00 4.92
2481 2919 5.314923 ACTTGATTGACATTGGCATGTAC 57.685 39.130 0.00 0.00 44.22 2.90
2483 2921 6.179756 ACTTGATTGACATTGGCATGTACTA 58.820 36.000 0.00 0.00 44.22 1.82
2484 2922 6.317140 ACTTGATTGACATTGGCATGTACTAG 59.683 38.462 0.00 0.00 44.22 2.57
2504 2942 4.119442 AGCTAGCATTTGAAAATGGCAG 57.881 40.909 18.83 9.69 44.54 4.85
2505 2943 3.512724 AGCTAGCATTTGAAAATGGCAGT 59.487 39.130 18.83 0.00 44.54 4.40
2525 2963 3.698040 AGTTAGCATCTGAAAATGGCAGG 59.302 43.478 0.00 0.00 34.20 4.85
2557 3003 5.224821 ACAGTCCCTTGTTTTCTACTACC 57.775 43.478 0.00 0.00 0.00 3.18
2599 3054 4.769488 TGGCAGCCACTCATTGTTATTTTA 59.231 37.500 11.22 0.00 0.00 1.52
2600 3055 5.102313 GGCAGCCACTCATTGTTATTTTAC 58.898 41.667 6.55 0.00 0.00 2.01
2633 3099 2.094762 ACTTCCGTAGCATTGACCAC 57.905 50.000 0.00 0.00 0.00 4.16
2635 3101 2.002586 CTTCCGTAGCATTGACCACAG 58.997 52.381 0.00 0.00 0.00 3.66
2639 3105 1.935873 CGTAGCATTGACCACAGGATG 59.064 52.381 0.00 0.00 46.00 3.51
2659 3125 0.965439 ATGAGCCGAGCTAGCTTAGG 59.035 55.000 26.64 26.64 41.75 2.69
2660 3126 1.109920 TGAGCCGAGCTAGCTTAGGG 61.110 60.000 29.60 25.12 41.75 3.53
2661 3127 2.029815 GCCGAGCTAGCTTAGGGC 59.970 66.667 28.34 28.34 42.19 5.19
2662 3128 2.797278 GCCGAGCTAGCTTAGGGCA 61.797 63.158 33.06 0.00 44.79 5.36
2663 3129 2.053618 CCGAGCTAGCTTAGGGCAT 58.946 57.895 24.51 0.75 44.79 4.40
2664 3130 0.320247 CCGAGCTAGCTTAGGGCATG 60.320 60.000 24.51 7.80 44.79 4.06
2665 3131 0.390860 CGAGCTAGCTTAGGGCATGT 59.609 55.000 20.42 0.00 44.79 3.21
2666 3132 1.613925 CGAGCTAGCTTAGGGCATGTA 59.386 52.381 20.42 0.00 44.79 2.29
2667 3133 2.608261 CGAGCTAGCTTAGGGCATGTAC 60.608 54.545 20.42 0.00 44.79 2.90
2668 3134 2.365617 GAGCTAGCTTAGGGCATGTACA 59.634 50.000 20.42 0.00 44.79 2.90
2669 3135 2.771943 AGCTAGCTTAGGGCATGTACAA 59.228 45.455 12.68 0.00 44.79 2.41
2670 3136 2.872858 GCTAGCTTAGGGCATGTACAAC 59.127 50.000 7.70 0.00 44.79 3.32
2671 3137 2.024176 AGCTTAGGGCATGTACAACG 57.976 50.000 0.00 0.00 44.79 4.10
2672 3138 1.553248 AGCTTAGGGCATGTACAACGA 59.447 47.619 0.00 0.00 44.79 3.85
2673 3139 2.170607 AGCTTAGGGCATGTACAACGAT 59.829 45.455 0.00 0.00 44.79 3.73
2674 3140 2.943033 GCTTAGGGCATGTACAACGATT 59.057 45.455 0.00 0.00 41.35 3.34
2675 3141 3.242739 GCTTAGGGCATGTACAACGATTG 60.243 47.826 0.00 0.00 41.35 2.67
2676 3142 2.779755 AGGGCATGTACAACGATTGA 57.220 45.000 0.00 0.00 0.00 2.57
2677 3143 3.281727 AGGGCATGTACAACGATTGAT 57.718 42.857 0.00 0.00 0.00 2.57
2678 3144 4.415881 AGGGCATGTACAACGATTGATA 57.584 40.909 0.00 0.00 0.00 2.15
2679 3145 4.776349 AGGGCATGTACAACGATTGATAA 58.224 39.130 0.00 0.00 0.00 1.75
2680 3146 4.816385 AGGGCATGTACAACGATTGATAAG 59.184 41.667 0.00 0.00 0.00 1.73
2681 3147 4.814234 GGGCATGTACAACGATTGATAAGA 59.186 41.667 0.00 0.00 0.00 2.10
2682 3148 5.470098 GGGCATGTACAACGATTGATAAGAT 59.530 40.000 0.00 0.00 0.00 2.40
2683 3149 6.649141 GGGCATGTACAACGATTGATAAGATA 59.351 38.462 0.00 0.00 0.00 1.98
2684 3150 7.148573 GGGCATGTACAACGATTGATAAGATAG 60.149 40.741 0.00 0.00 0.00 2.08
2685 3151 7.385205 GGCATGTACAACGATTGATAAGATAGT 59.615 37.037 0.00 0.00 0.00 2.12
2686 3152 8.765219 GCATGTACAACGATTGATAAGATAGTT 58.235 33.333 0.00 0.00 0.00 2.24
2753 3219 8.964533 ATGTCTATAATGGGTCATCTCTTAGT 57.035 34.615 0.00 0.00 0.00 2.24
2754 3220 8.410673 TGTCTATAATGGGTCATCTCTTAGTC 57.589 38.462 0.00 0.00 0.00 2.59
2755 3221 8.228206 TGTCTATAATGGGTCATCTCTTAGTCT 58.772 37.037 0.00 0.00 0.00 3.24
2756 3222 9.084533 GTCTATAATGGGTCATCTCTTAGTCTT 57.915 37.037 0.00 0.00 0.00 3.01
2760 3226 9.836179 ATAATGGGTCATCTCTTAGTCTTATCT 57.164 33.333 0.00 0.00 0.00 1.98
2761 3227 8.560124 AATGGGTCATCTCTTAGTCTTATCTT 57.440 34.615 0.00 0.00 0.00 2.40
2762 3228 7.979786 TGGGTCATCTCTTAGTCTTATCTTT 57.020 36.000 0.00 0.00 0.00 2.52
2763 3229 9.661954 ATGGGTCATCTCTTAGTCTTATCTTTA 57.338 33.333 0.00 0.00 0.00 1.85
2764 3230 9.488762 TGGGTCATCTCTTAGTCTTATCTTTAA 57.511 33.333 0.00 0.00 0.00 1.52
2791 3257 7.016361 ACTAGCTATTCTTAAAAACATGGCG 57.984 36.000 0.00 0.00 0.00 5.69
2792 3258 6.821665 ACTAGCTATTCTTAAAAACATGGCGA 59.178 34.615 0.00 0.00 0.00 5.54
2793 3259 6.124088 AGCTATTCTTAAAAACATGGCGAG 57.876 37.500 0.00 0.00 0.00 5.03
2794 3260 5.880332 AGCTATTCTTAAAAACATGGCGAGA 59.120 36.000 0.00 0.00 0.00 4.04
2795 3261 5.965918 GCTATTCTTAAAAACATGGCGAGAC 59.034 40.000 0.00 0.00 0.00 3.36
2796 3262 5.957842 ATTCTTAAAAACATGGCGAGACA 57.042 34.783 0.00 0.00 0.00 3.41
2797 3263 5.957842 TTCTTAAAAACATGGCGAGACAT 57.042 34.783 0.00 0.00 0.00 3.06
2798 3264 7.624360 ATTCTTAAAAACATGGCGAGACATA 57.376 32.000 0.00 0.00 0.00 2.29
2799 3265 7.624360 TTCTTAAAAACATGGCGAGACATAT 57.376 32.000 0.00 0.00 0.00 1.78
2800 3266 7.624360 TCTTAAAAACATGGCGAGACATATT 57.376 32.000 0.00 0.00 0.00 1.28
2801 3267 8.725405 TCTTAAAAACATGGCGAGACATATTA 57.275 30.769 0.00 0.00 0.00 0.98
2802 3268 9.337396 TCTTAAAAACATGGCGAGACATATTAT 57.663 29.630 0.00 0.00 0.00 1.28
2803 3269 9.385902 CTTAAAAACATGGCGAGACATATTATG 57.614 33.333 0.00 2.03 0.00 1.90
2804 3270 5.362556 AAACATGGCGAGACATATTATGC 57.637 39.130 3.52 0.00 0.00 3.14
2805 3271 4.277515 ACATGGCGAGACATATTATGCT 57.722 40.909 3.52 2.51 0.00 3.79
2806 3272 5.405935 ACATGGCGAGACATATTATGCTA 57.594 39.130 3.52 0.00 0.00 3.49
2807 3273 5.793817 ACATGGCGAGACATATTATGCTAA 58.206 37.500 3.52 0.00 0.00 3.09
2808 3274 5.871524 ACATGGCGAGACATATTATGCTAAG 59.128 40.000 3.52 2.57 0.00 2.18
2809 3275 5.722021 TGGCGAGACATATTATGCTAAGA 57.278 39.130 3.52 0.00 0.00 2.10
2810 3276 5.470368 TGGCGAGACATATTATGCTAAGAC 58.530 41.667 3.52 3.76 0.00 3.01
2811 3277 5.010617 TGGCGAGACATATTATGCTAAGACA 59.989 40.000 3.52 5.82 0.00 3.41
2812 3278 5.574830 GGCGAGACATATTATGCTAAGACAG 59.425 44.000 3.52 0.00 0.00 3.51
2833 3299 9.434420 AGACAGCATCATTTATTCTAAGATAGC 57.566 33.333 0.00 0.00 0.00 2.97
2834 3300 9.212641 GACAGCATCATTTATTCTAAGATAGCA 57.787 33.333 0.00 0.00 0.00 3.49
2835 3301 9.736414 ACAGCATCATTTATTCTAAGATAGCAT 57.264 29.630 0.00 0.00 0.00 3.79
2837 3303 9.955102 AGCATCATTTATTCTAAGATAGCATCA 57.045 29.630 0.00 0.00 0.00 3.07
2847 3313 7.895975 TCTAAGATAGCATCATTGTACATGC 57.104 36.000 10.53 10.53 44.96 4.06
2848 3314 5.954296 AAGATAGCATCATTGTACATGCC 57.046 39.130 14.08 1.71 45.63 4.40
2849 3315 4.976864 AGATAGCATCATTGTACATGCCA 58.023 39.130 14.08 3.01 45.63 4.92
2850 3316 5.567430 AGATAGCATCATTGTACATGCCAT 58.433 37.500 14.08 7.53 45.63 4.40
2851 3317 6.008331 AGATAGCATCATTGTACATGCCATT 58.992 36.000 14.08 1.16 45.63 3.16
2852 3318 7.170277 AGATAGCATCATTGTACATGCCATTA 58.830 34.615 14.08 3.14 45.63 1.90
2853 3319 5.700722 AGCATCATTGTACATGCCATTAG 57.299 39.130 14.08 0.00 45.63 1.73
2854 3320 4.521639 AGCATCATTGTACATGCCATTAGG 59.478 41.667 14.08 0.00 45.63 2.69
2873 3339 1.606601 TGTCTCGTGGCAGTAGGCT 60.607 57.895 0.00 0.00 44.01 4.58
2878 3344 1.066587 CGTGGCAGTAGGCTAGCTC 59.933 63.158 15.72 4.82 44.01 4.09
2919 3385 4.877251 AGAGAAGAGAGATACCGTGTGTAC 59.123 45.833 0.00 0.00 30.62 2.90
2931 3409 8.239998 AGATACCGTGTGTACTTAAGTAGTTTC 58.760 37.037 15.68 12.34 38.33 2.78
2946 3424 0.388520 GTTTCCCTTGCGGTTCATGC 60.389 55.000 0.00 0.00 0.00 4.06
2949 3427 1.080569 CCCTTGCGGTTCATGCAAC 60.081 57.895 0.00 0.00 46.62 4.17
2969 3447 1.845809 CGTGGTGCACTTTCTCTGCC 61.846 60.000 17.98 0.00 33.36 4.85
2972 3450 0.595095 GGTGCACTTTCTCTGCCAAG 59.405 55.000 17.98 0.00 33.36 3.61
2973 3451 0.595095 GTGCACTTTCTCTGCCAAGG 59.405 55.000 10.32 0.00 33.36 3.61
2977 3456 2.560105 GCACTTTCTCTGCCAAGGAAAT 59.440 45.455 0.00 0.00 0.00 2.17
2978 3457 3.366781 GCACTTTCTCTGCCAAGGAAATC 60.367 47.826 0.00 0.00 0.00 2.17
2984 3463 5.178096 TCTCTGCCAAGGAAATCATACAA 57.822 39.130 0.00 0.00 0.00 2.41
2985 3464 5.759059 TCTCTGCCAAGGAAATCATACAAT 58.241 37.500 0.00 0.00 0.00 2.71
2988 3473 7.663081 TCTCTGCCAAGGAAATCATACAATATC 59.337 37.037 0.00 0.00 0.00 1.63
3032 3517 3.900388 TTTCTTTTGGCAATTGCATGC 57.100 38.095 30.32 11.82 45.67 4.06
3120 3606 0.109735 GTGGCGTCCAAAAGCTAAGC 60.110 55.000 0.00 0.00 34.18 3.09
3121 3607 0.250727 TGGCGTCCAAAAGCTAAGCT 60.251 50.000 0.00 0.00 42.56 3.74
3122 3608 0.169009 GGCGTCCAAAAGCTAAGCTG 59.831 55.000 0.00 0.00 39.62 4.24
3123 3609 0.455126 GCGTCCAAAAGCTAAGCTGC 60.455 55.000 0.00 0.00 39.62 5.25
3124 3610 1.160137 CGTCCAAAAGCTAAGCTGCT 58.840 50.000 0.00 0.00 46.40 4.24
3131 3617 3.467776 AGCTAAGCTGCTTGTAGCC 57.532 52.632 25.64 13.15 44.76 3.93
3141 3627 1.450134 CTTGTAGCCGCTGGATGCA 60.450 57.895 2.16 0.00 43.06 3.96
3142 3628 0.816825 CTTGTAGCCGCTGGATGCAT 60.817 55.000 0.00 0.00 43.06 3.96
3143 3629 1.096967 TTGTAGCCGCTGGATGCATG 61.097 55.000 2.46 0.00 43.06 4.06
3147 3633 2.910479 CCGCTGGATGCATGCCAT 60.910 61.111 16.68 8.81 43.06 4.40
3148 3634 2.335011 CGCTGGATGCATGCCATG 59.665 61.111 16.68 0.00 43.06 3.66
3150 3636 1.830847 GCTGGATGCATGCCATGGA 60.831 57.895 18.40 3.61 42.31 3.41
3151 3637 2.038690 CTGGATGCATGCCATGGAC 58.961 57.895 18.40 7.64 34.33 4.02
3156 3642 2.579873 GATGCATGCCATGGACTAACT 58.420 47.619 18.40 0.00 33.29 2.24
3160 3646 3.054434 TGCATGCCATGGACTAACTACTT 60.054 43.478 18.40 0.00 0.00 2.24
3161 3647 4.163268 TGCATGCCATGGACTAACTACTTA 59.837 41.667 18.40 0.00 0.00 2.24
3164 3650 6.934645 GCATGCCATGGACTAACTACTTATTA 59.065 38.462 18.40 0.00 0.00 0.98
3165 3651 7.607991 GCATGCCATGGACTAACTACTTATTAT 59.392 37.037 18.40 0.00 0.00 1.28
3227 3796 2.733593 GTCGTCTGACGTGTGGGC 60.734 66.667 27.16 10.02 43.14 5.36
3293 3862 1.768870 GGCTTGGGTATAGAGCAAGGA 59.231 52.381 0.00 0.00 38.14 3.36
3294 3863 2.485657 GGCTTGGGTATAGAGCAAGGAC 60.486 54.545 0.00 0.00 38.14 3.85
3295 3864 2.170607 GCTTGGGTATAGAGCAAGGACA 59.829 50.000 0.00 0.00 36.45 4.02
3298 3867 5.440610 CTTGGGTATAGAGCAAGGACAAAT 58.559 41.667 0.00 0.00 0.00 2.32
3330 3902 5.702865 CCATATAATTGGAGGCACAATTCG 58.297 41.667 19.07 9.73 45.24 3.34
3341 3914 0.096976 CACAATTCGATCGTGTGGCC 59.903 55.000 22.75 0.00 39.17 5.36
3343 3916 0.801872 CAATTCGATCGTGTGGCCAA 59.198 50.000 7.24 0.00 0.00 4.52
3378 3951 6.687647 GCAGCCAGATTTTTCTCCTATCTAGT 60.688 42.308 0.00 0.00 0.00 2.57
3379 3952 6.928492 CAGCCAGATTTTTCTCCTATCTAGTC 59.072 42.308 0.00 0.00 0.00 2.59
3380 3953 6.843861 AGCCAGATTTTTCTCCTATCTAGTCT 59.156 38.462 0.00 0.00 0.00 3.24
3381 3954 8.007742 AGCCAGATTTTTCTCCTATCTAGTCTA 58.992 37.037 0.00 0.00 0.00 2.59
3382 3955 8.303876 GCCAGATTTTTCTCCTATCTAGTCTAG 58.696 40.741 0.00 0.00 0.00 2.43
3414 3987 8.567104 GTTCAATAGTAACTCTACTAGCCTACC 58.433 40.741 0.00 0.00 42.56 3.18
3426 4002 4.664392 ACTAGCCTACCGATTACAGCTAT 58.336 43.478 0.00 0.00 32.78 2.97
3442 4018 5.334421 ACAGCTATAACCTATAGTCCCCTG 58.666 45.833 0.00 4.46 40.19 4.45
3443 4019 5.076039 ACAGCTATAACCTATAGTCCCCTGA 59.924 44.000 0.00 0.00 40.19 3.86
3457 4033 5.152934 AGTCCCCTGAAAGAAACTACTACA 58.847 41.667 0.00 0.00 34.07 2.74
3545 4121 4.789012 AAATCATAGTGCCTTGTGGTTG 57.211 40.909 0.00 0.00 35.27 3.77
3559 4135 1.285641 GGTTGGGTTCACATGTGCG 59.714 57.895 21.38 0.00 0.00 5.34
3564 4150 1.358402 GGTTCACATGTGCGCACAA 59.642 52.632 43.14 26.62 45.41 3.33
3591 4177 7.500892 ACAGTGAACCAACAAAATGTAGTATCA 59.499 33.333 0.00 0.00 0.00 2.15
3603 4207 5.743026 ATGTAGTATCACTCAGTCGACTG 57.257 43.478 34.76 34.76 45.08 3.51
3604 4208 3.939592 TGTAGTATCACTCAGTCGACTGG 59.060 47.826 37.82 30.26 43.91 4.00
3617 4221 3.118738 AGTCGACTGGGGTTTAGCAATAG 60.119 47.826 19.30 0.00 0.00 1.73
3618 4222 1.940613 CGACTGGGGTTTAGCAATAGC 59.059 52.381 0.00 0.00 42.56 2.97
3686 4705 0.610687 AGAGAGGGACAAGAAAGGCG 59.389 55.000 0.00 0.00 0.00 5.52
3785 4805 3.005684 TCAACCAAAGCAAAAGCATCGAT 59.994 39.130 0.00 0.00 0.00 3.59
3786 4806 2.950433 ACCAAAGCAAAAGCATCGATG 58.050 42.857 21.27 21.27 0.00 3.84
3800 4820 0.740149 TCGATGAATGCCATGTTGCC 59.260 50.000 0.00 0.00 35.17 4.52
3828 4857 5.778241 TCTCACTGGACAAATTACTAGTGGA 59.222 40.000 5.39 12.59 42.79 4.02
3924 4953 0.457035 CCGGCCAATCATCAACAAGG 59.543 55.000 2.24 0.00 0.00 3.61
3947 4976 1.858091 ATCGGAATCTAGCAGCAACG 58.142 50.000 0.00 0.00 0.00 4.10
3999 5032 4.415332 TCGGGAAGCGTGTCGAGC 62.415 66.667 0.00 0.00 0.00 5.03
4001 5034 2.811317 GGGAAGCGTGTCGAGCTG 60.811 66.667 0.00 0.00 45.31 4.24
4002 5035 2.811317 GGAAGCGTGTCGAGCTGG 60.811 66.667 0.00 0.00 45.31 4.85
4003 5036 2.811317 GAAGCGTGTCGAGCTGGG 60.811 66.667 0.00 0.00 45.31 4.45
4009 5042 2.679996 TGTCGAGCTGGGCTGCTA 60.680 61.111 0.97 0.00 44.17 3.49
4051 5085 7.881775 AACTTCCTGCTTAAAAGAGAAAAGA 57.118 32.000 0.00 0.00 0.00 2.52
4057 5091 6.972901 CCTGCTTAAAAGAGAAAAGAAACGTT 59.027 34.615 0.00 0.00 0.00 3.99
4058 5092 7.044052 CCTGCTTAAAAGAGAAAAGAAACGTTG 60.044 37.037 0.00 0.00 0.00 4.10
4070 5107 6.626199 AAAGAAACGTTGCTTTGTTAAGTG 57.374 33.333 29.38 0.00 33.40 3.16
4077 5114 0.888619 GCTTTGTTAAGTGCCCCCTC 59.111 55.000 0.00 0.00 33.74 4.30
4090 5127 2.575993 CCCTCTGTGCTCCGTGAG 59.424 66.667 0.00 0.00 0.00 3.51
4093 5130 0.389166 CCTCTGTGCTCCGTGAGAAC 60.389 60.000 5.36 5.36 0.00 3.01
4094 5131 0.600557 CTCTGTGCTCCGTGAGAACT 59.399 55.000 11.79 0.00 0.00 3.01
4095 5132 0.315251 TCTGTGCTCCGTGAGAACTG 59.685 55.000 11.79 11.21 0.00 3.16
4097 5134 0.315251 TGTGCTCCGTGAGAACTGAG 59.685 55.000 11.79 0.00 0.00 3.35
4099 5136 1.000163 GTGCTCCGTGAGAACTGAGAA 60.000 52.381 5.24 0.00 0.00 2.87
4100 5137 1.270826 TGCTCCGTGAGAACTGAGAAG 59.729 52.381 5.24 0.00 0.00 2.85
4101 5138 1.542030 GCTCCGTGAGAACTGAGAAGA 59.458 52.381 5.24 0.00 0.00 2.87
4102 5139 2.669950 GCTCCGTGAGAACTGAGAAGAC 60.670 54.545 5.24 0.00 0.00 3.01
4103 5140 2.554462 CTCCGTGAGAACTGAGAAGACA 59.446 50.000 0.00 0.00 0.00 3.41
4105 5142 3.057245 TCCGTGAGAACTGAGAAGACATG 60.057 47.826 0.00 0.00 0.00 3.21
4106 5143 3.305676 CCGTGAGAACTGAGAAGACATGT 60.306 47.826 0.00 0.00 0.00 3.21
4107 5144 4.082733 CCGTGAGAACTGAGAAGACATGTA 60.083 45.833 0.00 0.00 0.00 2.29
4108 5145 4.854291 CGTGAGAACTGAGAAGACATGTAC 59.146 45.833 0.00 0.00 0.00 2.90
4111 5148 6.870965 GTGAGAACTGAGAAGACATGTACATT 59.129 38.462 5.37 0.00 0.00 2.71
4112 5149 7.386299 GTGAGAACTGAGAAGACATGTACATTT 59.614 37.037 5.37 0.00 0.00 2.32
4113 5150 7.933577 TGAGAACTGAGAAGACATGTACATTTT 59.066 33.333 5.37 1.14 0.00 1.82
4115 5152 9.950496 AGAACTGAGAAGACATGTACATTTTAT 57.050 29.630 5.37 0.00 0.00 1.40
4118 5155 9.302345 ACTGAGAAGACATGTACATTTTATACG 57.698 33.333 5.37 0.00 0.00 3.06
4119 5156 9.516314 CTGAGAAGACATGTACATTTTATACGA 57.484 33.333 5.37 0.00 0.00 3.43
4120 5157 9.863845 TGAGAAGACATGTACATTTTATACGAA 57.136 29.630 5.37 0.00 0.00 3.85
4131 5168 9.866936 GTACATTTTATACGAAGTCAAACAACA 57.133 29.630 0.00 0.00 43.93 3.33
4152 5189 7.763528 ACAACACAAAGCTTGATCAAATTTACA 59.236 29.630 9.88 0.00 0.00 2.41
4159 5196 8.822652 AAGCTTGATCAAATTTACAGGAAAAG 57.177 30.769 9.88 0.00 0.00 2.27
4160 5197 7.955918 AGCTTGATCAAATTTACAGGAAAAGT 58.044 30.769 9.88 0.00 0.00 2.66
4164 5201 8.698973 TGATCAAATTTACAGGAAAAGTACCA 57.301 30.769 0.00 0.00 0.00 3.25
4166 5203 8.706322 ATCAAATTTACAGGAAAAGTACCAGT 57.294 30.769 0.00 0.00 0.00 4.00
4171 5208 8.843885 ATTTACAGGAAAAGTACCAGTAACTC 57.156 34.615 0.00 0.00 38.45 3.01
4172 5209 5.881923 ACAGGAAAAGTACCAGTAACTCA 57.118 39.130 0.00 0.00 0.00 3.41
4238 5278 7.516198 TTAATGATAGTACTACCTCCGTTCC 57.484 40.000 4.31 0.00 0.00 3.62
4239 5279 4.785346 TGATAGTACTACCTCCGTTCCT 57.215 45.455 4.31 0.00 0.00 3.36
4240 5280 5.894298 TGATAGTACTACCTCCGTTCCTA 57.106 43.478 4.31 0.00 0.00 2.94
4241 5281 6.252599 TGATAGTACTACCTCCGTTCCTAA 57.747 41.667 4.31 0.00 0.00 2.69
4242 5282 6.662755 TGATAGTACTACCTCCGTTCCTAAA 58.337 40.000 4.31 0.00 0.00 1.85
4243 5283 7.293073 TGATAGTACTACCTCCGTTCCTAAAT 58.707 38.462 4.31 0.00 0.00 1.40
4244 5284 8.439971 TGATAGTACTACCTCCGTTCCTAAATA 58.560 37.037 4.31 0.00 0.00 1.40
4245 5285 9.460019 GATAGTACTACCTCCGTTCCTAAATAT 57.540 37.037 4.31 0.00 0.00 1.28
4248 5288 9.240734 AGTACTACCTCCGTTCCTAAATATATG 57.759 37.037 0.00 0.00 0.00 1.78
4249 5289 9.236006 GTACTACCTCCGTTCCTAAATATATGA 57.764 37.037 0.00 0.00 0.00 2.15
4250 5290 8.120140 ACTACCTCCGTTCCTAAATATATGAC 57.880 38.462 0.00 0.00 0.00 3.06
4251 5291 7.949006 ACTACCTCCGTTCCTAAATATATGACT 59.051 37.037 0.00 0.00 0.00 3.41
4252 5292 7.613551 ACCTCCGTTCCTAAATATATGACTT 57.386 36.000 0.00 0.00 0.00 3.01
4253 5293 8.030913 ACCTCCGTTCCTAAATATATGACTTT 57.969 34.615 0.00 0.00 0.00 2.66
4254 5294 9.151177 ACCTCCGTTCCTAAATATATGACTTTA 57.849 33.333 0.00 0.00 0.00 1.85
4257 5297 9.938280 TCCGTTCCTAAATATATGACTTTATGG 57.062 33.333 0.00 0.00 0.00 2.74
4258 5298 8.665685 CCGTTCCTAAATATATGACTTTATGGC 58.334 37.037 0.00 0.00 0.00 4.40
4259 5299 8.380644 CGTTCCTAAATATATGACTTTATGGCG 58.619 37.037 0.00 0.00 0.00 5.69
4260 5300 8.665685 GTTCCTAAATATATGACTTTATGGCGG 58.334 37.037 0.00 0.00 0.00 6.13
4261 5301 7.913789 TCCTAAATATATGACTTTATGGCGGT 58.086 34.615 0.00 0.00 0.00 5.68
4262 5302 8.380099 TCCTAAATATATGACTTTATGGCGGTT 58.620 33.333 0.00 0.00 0.00 4.44
4263 5303 9.010029 CCTAAATATATGACTTTATGGCGGTTT 57.990 33.333 0.00 0.00 0.00 3.27
4266 5306 9.569122 AAATATATGACTTTATGGCGGTTTAGT 57.431 29.630 0.00 0.00 0.00 2.24
4267 5307 6.861065 ATATGACTTTATGGCGGTTTAGTG 57.139 37.500 0.00 0.00 0.00 2.74
4273 5313 7.175293 TGACTTTATGGCGGTTTAGTGTTTTAT 59.825 33.333 0.00 0.00 0.00 1.40
4281 5321 6.643360 GGCGGTTTAGTGTTTTATTTGTTGAT 59.357 34.615 0.00 0.00 0.00 2.57
4309 5351 7.867305 TTCTTAAGTGGTCAAACATTGTACA 57.133 32.000 1.63 0.00 0.00 2.90
4310 5352 7.867305 TCTTAAGTGGTCAAACATTGTACAA 57.133 32.000 11.41 11.41 0.00 2.41
4321 5363 9.687717 GTCAAACATTGTACAATTTGACTTTTG 57.312 29.630 34.60 25.77 41.12 2.44
4341 5385 9.936759 ACTTTTGTCAAAACCTTCTTTTAATCA 57.063 25.926 6.65 0.00 0.00 2.57
4372 5417 8.910351 GGGAGCATCTCTAATTATTGTAACTT 57.090 34.615 0.00 0.00 33.73 2.66
4373 5418 9.998106 GGGAGCATCTCTAATTATTGTAACTTA 57.002 33.333 0.00 0.00 33.73 2.24
4388 5434 6.827586 TGTAACTTAATTAGCAAAGGGGTG 57.172 37.500 0.00 0.00 0.00 4.61
4390 5436 5.977489 AACTTAATTAGCAAAGGGGTGAC 57.023 39.130 0.00 0.00 0.00 3.67
4391 5437 5.256806 ACTTAATTAGCAAAGGGGTGACT 57.743 39.130 0.00 0.00 0.00 3.41
4417 5569 9.794753 TCTATATCCTATGTACTACTACCTCCA 57.205 37.037 0.00 0.00 0.00 3.86
4429 5581 3.798515 ACTACCTCCATCTGGGTTTACA 58.201 45.455 0.00 0.00 37.07 2.41
4434 5586 4.010349 CCTCCATCTGGGTTTACAAGTTC 58.990 47.826 0.00 0.00 38.11 3.01
4435 5587 4.010349 CTCCATCTGGGTTTACAAGTTCC 58.990 47.826 0.00 0.00 38.11 3.62
4440 5592 5.845391 TCTGGGTTTACAAGTTCCTTTTG 57.155 39.130 0.00 0.00 0.00 2.44
4442 5594 5.717654 TCTGGGTTTACAAGTTCCTTTTGTT 59.282 36.000 0.00 0.00 39.36 2.83
4443 5595 6.211785 TCTGGGTTTACAAGTTCCTTTTGTTT 59.788 34.615 0.00 0.00 39.36 2.83
4444 5596 6.770542 TGGGTTTACAAGTTCCTTTTGTTTT 58.229 32.000 0.00 0.00 39.36 2.43
4445 5597 7.225011 TGGGTTTACAAGTTCCTTTTGTTTTT 58.775 30.769 0.00 0.00 39.36 1.94
4465 5617 5.819825 TTTTGTGTGCCCAAATTTTAACC 57.180 34.783 0.00 0.00 34.50 2.85
4466 5618 4.487714 TTGTGTGCCCAAATTTTAACCA 57.512 36.364 0.00 0.00 0.00 3.67
4467 5619 4.696479 TGTGTGCCCAAATTTTAACCAT 57.304 36.364 0.00 0.00 0.00 3.55
4468 5620 5.808366 TGTGTGCCCAAATTTTAACCATA 57.192 34.783 0.00 0.00 0.00 2.74
4469 5621 6.365970 TGTGTGCCCAAATTTTAACCATAT 57.634 33.333 0.00 0.00 0.00 1.78
4470 5622 7.482169 TGTGTGCCCAAATTTTAACCATATA 57.518 32.000 0.00 0.00 0.00 0.86
4471 5623 8.083828 TGTGTGCCCAAATTTTAACCATATAT 57.916 30.769 0.00 0.00 0.00 0.86
4472 5624 8.543774 TGTGTGCCCAAATTTTAACCATATATT 58.456 29.630 0.00 0.00 0.00 1.28
4473 5625 9.389755 GTGTGCCCAAATTTTAACCATATATTT 57.610 29.630 0.00 0.00 0.00 1.40
4629 5781 2.723658 CGAGCTACGCATGAGAATTCTC 59.276 50.000 25.68 25.68 38.12 2.87
4687 5855 8.551205 TGCGTTTTAAATCACATTGCATTTAAA 58.449 25.926 15.98 15.98 40.34 1.52
4768 6770 6.872920 TCACATGATTTAAATTGTAAGGGCC 58.127 36.000 0.00 0.00 0.00 5.80
4781 6783 5.881923 TGTAAGGGCCGAATTAGTATTCT 57.118 39.130 0.00 0.00 38.40 2.40
4782 6784 5.607477 TGTAAGGGCCGAATTAGTATTCTG 58.393 41.667 0.00 0.00 38.40 3.02
4824 6833 1.156736 GCAACTCTACGGCAACACAT 58.843 50.000 0.00 0.00 0.00 3.21
5010 7645 1.227943 GTGCTGGTGCTTCTGGTCA 60.228 57.895 0.00 0.00 40.48 4.02
5457 8225 1.160329 GCGCCGACAGCATCCTTATT 61.160 55.000 0.00 0.00 44.04 1.40
5865 8660 1.068083 CATGGTGGACGAGATCGGG 59.932 63.158 7.22 0.00 44.95 5.14
6478 9279 6.116680 GATGAAACAACATCATGTCTCCTC 57.883 41.667 0.00 0.00 44.00 3.71
6621 9422 1.468895 CGTATGTACGTGCATGCGTA 58.531 50.000 35.55 14.39 45.32 4.42
6715 9534 0.322997 TACCGATGTTTTGCCCCAGG 60.323 55.000 0.00 0.00 0.00 4.45
6726 9545 1.225704 GCCCCAGGAAGGATGTGAG 59.774 63.158 0.00 0.00 41.22 3.51
6768 9587 4.273318 AGGGTCTGTTTATTCCTTCATGC 58.727 43.478 0.00 0.00 0.00 4.06
6966 9874 0.455005 CGGTCGTAGTTTCCTCTCCC 59.545 60.000 0.00 0.00 0.00 4.30
7010 9918 1.659794 CTTGTCCTGCCCAAAACCG 59.340 57.895 0.00 0.00 0.00 4.44
7030 9938 5.352284 ACCGCATTGTGTTGAAACAAATAA 58.648 33.333 0.00 0.00 42.98 1.40
7064 9972 8.990163 AACTTAGATTAACCCAGAAAAGAACA 57.010 30.769 0.00 0.00 0.00 3.18
7069 9977 7.010160 AGATTAACCCAGAAAAGAACAATGGA 58.990 34.615 0.00 0.00 32.55 3.41
7081 9989 9.696917 GAAAAGAACAATGGAAATCATGTTAGT 57.303 29.630 0.00 0.00 35.99 2.24
7119 10696 2.170607 AGTAAACTAGACATGCGGGCAT 59.829 45.455 0.00 0.00 37.08 4.40
7173 10750 1.735700 GCAAAGAAGGGTTAATGGCGC 60.736 52.381 0.00 0.00 0.00 6.53
7180 10757 2.392974 GGTTAATGGCGCCGTCGTT 61.393 57.895 24.10 15.87 38.14 3.85
7183 10760 1.355796 TTAATGGCGCCGTCGTTGAG 61.356 55.000 24.10 0.00 38.14 3.02
7198 10775 2.290367 CGTTGAGATTTTGAGCACCACA 59.710 45.455 0.00 0.00 0.00 4.17
7207 10784 2.937469 TGAGCACCACAAACAACAAG 57.063 45.000 0.00 0.00 0.00 3.16
7308 10885 2.591715 ACAAGTGTCACAGCGGGC 60.592 61.111 5.62 0.00 0.00 6.13
7323 10900 0.039527 CGGGCCCAAAAAGAAAGTCG 60.040 55.000 24.92 0.00 0.00 4.18
7324 10901 1.324383 GGGCCCAAAAAGAAAGTCGA 58.676 50.000 19.95 0.00 0.00 4.20
7345 10922 1.952296 GATGCGATCTTCAAGGGCAAT 59.048 47.619 3.38 0.00 37.15 3.56
7350 10927 3.545703 CGATCTTCAAGGGCAATAACCT 58.454 45.455 0.00 0.00 40.96 3.50
7362 10939 6.856757 AGGGCAATAACCTTGAGAATATCAT 58.143 36.000 0.00 0.00 37.89 2.45
7363 10940 6.944862 AGGGCAATAACCTTGAGAATATCATC 59.055 38.462 0.00 0.00 37.89 2.92
7364 10941 6.716628 GGGCAATAACCTTGAGAATATCATCA 59.283 38.462 0.00 0.00 37.89 3.07
7366 10943 7.293745 GCAATAACCTTGAGAATATCATCACG 58.706 38.462 0.00 0.00 37.89 4.35
7367 10944 7.571983 GCAATAACCTTGAGAATATCATCACGG 60.572 40.741 9.75 9.75 39.93 4.94
7368 10945 5.359194 AACCTTGAGAATATCATCACGGT 57.641 39.130 10.74 10.74 46.63 4.83
7369 10946 5.359194 ACCTTGAGAATATCATCACGGTT 57.641 39.130 10.74 0.23 43.37 4.44
7370 10947 5.360591 ACCTTGAGAATATCATCACGGTTC 58.639 41.667 10.74 0.00 43.37 3.62
7371 10948 5.129485 ACCTTGAGAATATCATCACGGTTCT 59.871 40.000 10.74 0.00 43.37 3.01
7372 10949 5.464722 CCTTGAGAATATCATCACGGTTCTG 59.535 44.000 5.09 0.00 37.89 3.02
7373 10950 5.598416 TGAGAATATCATCACGGTTCTGT 57.402 39.130 0.00 0.00 31.12 3.41
7374 10951 5.977635 TGAGAATATCATCACGGTTCTGTT 58.022 37.500 0.00 0.00 31.12 3.16
7375 10952 6.406370 TGAGAATATCATCACGGTTCTGTTT 58.594 36.000 0.00 0.00 31.12 2.83
7376 10953 6.313658 TGAGAATATCATCACGGTTCTGTTTG 59.686 38.462 0.00 0.00 31.12 2.93
7377 10954 6.173339 AGAATATCATCACGGTTCTGTTTGT 58.827 36.000 0.00 0.00 0.00 2.83
7378 10955 6.313905 AGAATATCATCACGGTTCTGTTTGTC 59.686 38.462 0.00 0.00 0.00 3.18
7379 10956 3.186702 TCATCACGGTTCTGTTTGTCA 57.813 42.857 0.00 0.00 0.00 3.58
7380 10957 2.869801 TCATCACGGTTCTGTTTGTCAC 59.130 45.455 0.00 0.00 0.00 3.67
7381 10958 1.658994 TCACGGTTCTGTTTGTCACC 58.341 50.000 0.00 0.00 0.00 4.02
7382 10959 1.066071 TCACGGTTCTGTTTGTCACCA 60.066 47.619 0.00 0.00 0.00 4.17
7383 10960 1.063469 CACGGTTCTGTTTGTCACCAC 59.937 52.381 0.00 0.00 0.00 4.16
7384 10961 0.661020 CGGTTCTGTTTGTCACCACC 59.339 55.000 0.00 0.00 0.00 4.61
7385 10962 0.661020 GGTTCTGTTTGTCACCACCG 59.339 55.000 0.00 0.00 0.00 4.94
7386 10963 1.658994 GTTCTGTTTGTCACCACCGA 58.341 50.000 0.00 0.00 0.00 4.69
7390 10967 1.522130 GTTTGTCACCACCGACCGT 60.522 57.895 0.00 0.00 34.88 4.83
7391 10968 1.521906 TTTGTCACCACCGACCGTG 60.522 57.895 0.00 0.00 42.62 4.94
7392 10969 4.595538 TGTCACCACCGACCGTGC 62.596 66.667 0.00 0.00 41.53 5.34
7398 10975 4.920112 CACCGACCGTGCCACCAA 62.920 66.667 0.00 0.00 35.18 3.67
7400 10977 2.671619 CCGACCGTGCCACCAAAT 60.672 61.111 0.00 0.00 0.00 2.32
7403 10980 0.446222 CGACCGTGCCACCAAATAAG 59.554 55.000 0.00 0.00 0.00 1.73
7405 10982 1.248101 ACCGTGCCACCAAATAAGCC 61.248 55.000 0.00 0.00 0.00 4.35
7408 10985 1.304052 TGCCACCAAATAAGCCGCT 60.304 52.632 0.00 0.00 0.00 5.52
7409 10986 0.034960 TGCCACCAAATAAGCCGCTA 60.035 50.000 0.00 0.00 0.00 4.26
7411 10988 1.681264 GCCACCAAATAAGCCGCTATT 59.319 47.619 0.00 0.00 0.00 1.73
7412 10989 2.543653 GCCACCAAATAAGCCGCTATTG 60.544 50.000 0.00 0.00 0.00 1.90
7413 10990 2.948979 CCACCAAATAAGCCGCTATTGA 59.051 45.455 12.60 0.00 0.00 2.57
7415 10992 2.618709 ACCAAATAAGCCGCTATTGAGC 59.381 45.455 12.60 0.00 46.00 4.26
7435 11012 4.910746 GCATGTAGTATGCGTCTATTGG 57.089 45.455 0.00 0.00 35.17 3.16
7436 11013 3.679980 GCATGTAGTATGCGTCTATTGGG 59.320 47.826 0.00 0.00 35.17 4.12
7438 11015 2.696187 TGTAGTATGCGTCTATTGGGCA 59.304 45.455 0.00 0.00 41.48 5.36
7440 11017 1.762957 AGTATGCGTCTATTGGGCAGT 59.237 47.619 0.00 0.00 40.44 4.40
7442 11019 2.128771 ATGCGTCTATTGGGCAGTTT 57.871 45.000 0.00 0.00 40.44 2.66
7443 11020 2.772077 TGCGTCTATTGGGCAGTTTA 57.228 45.000 0.00 0.00 32.07 2.01
7444 11021 3.275617 TGCGTCTATTGGGCAGTTTAT 57.724 42.857 0.00 0.00 32.07 1.40
7445 11022 3.616219 TGCGTCTATTGGGCAGTTTATT 58.384 40.909 0.00 0.00 32.07 1.40
7446 11023 3.625764 TGCGTCTATTGGGCAGTTTATTC 59.374 43.478 0.00 0.00 32.07 1.75
7447 11024 3.003378 GCGTCTATTGGGCAGTTTATTCC 59.997 47.826 0.00 0.00 0.00 3.01
7448 11025 4.196193 CGTCTATTGGGCAGTTTATTCCA 58.804 43.478 0.00 0.00 0.00 3.53
7449 11026 4.821805 CGTCTATTGGGCAGTTTATTCCAT 59.178 41.667 0.00 0.00 0.00 3.41
7451 11028 5.594317 GTCTATTGGGCAGTTTATTCCATGT 59.406 40.000 0.00 0.00 0.00 3.21
7452 11029 5.827797 TCTATTGGGCAGTTTATTCCATGTC 59.172 40.000 0.00 0.00 0.00 3.06
7453 11030 3.448093 TGGGCAGTTTATTCCATGTCA 57.552 42.857 0.00 0.00 0.00 3.58
7454 11031 3.088532 TGGGCAGTTTATTCCATGTCAC 58.911 45.455 0.00 0.00 0.00 3.67
7455 11032 2.097466 GGGCAGTTTATTCCATGTCACG 59.903 50.000 0.00 0.00 0.00 4.35
7456 11033 2.097466 GGCAGTTTATTCCATGTCACGG 59.903 50.000 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.634039 GCACCATAGGTCCCTAAACTATTTCA 60.634 42.308 0.00 0.00 31.02 2.69
53 54 0.398696 AGGACACCCGTGCAATGTTA 59.601 50.000 0.00 0.00 35.57 2.41
66 67 0.463620 GAGGAGGAGCATGAGGACAC 59.536 60.000 0.00 0.00 0.00 3.67
74 75 1.419387 GCATAACTGGAGGAGGAGCAT 59.581 52.381 0.00 0.00 0.00 3.79
142 143 1.582502 GAACGTCGCCATTAACTCTCG 59.417 52.381 0.00 0.00 0.00 4.04
150 151 2.435938 ATGCCGAACGTCGCCATT 60.436 55.556 0.00 0.00 34.03 3.16
156 157 2.203800 TAGATGACATGCCGAACGTC 57.796 50.000 0.00 0.00 0.00 4.34
187 188 1.372499 CGTCGACCGTGTCAACCAT 60.372 57.895 10.58 0.00 32.09 3.55
221 222 0.527565 CCCTTCATTGGCAAACTCGG 59.472 55.000 3.01 3.01 0.00 4.63
248 250 1.141881 CCTCGTACCGCTTGCTCAT 59.858 57.895 0.00 0.00 0.00 2.90
780 872 2.552743 TCGACTGGTCTAATATGAGGCG 59.447 50.000 0.00 0.00 36.47 5.52
787 889 9.887629 CTATCCTTATAGTCGACTGGTCTAATA 57.112 37.037 28.12 13.29 31.96 0.98
788 890 7.830201 CCTATCCTTATAGTCGACTGGTCTAAT 59.170 40.741 28.12 14.33 34.36 1.73
789 891 7.166851 CCTATCCTTATAGTCGACTGGTCTAA 58.833 42.308 28.12 16.90 34.36 2.10
793 895 4.664392 CCCTATCCTTATAGTCGACTGGT 58.336 47.826 28.12 17.96 34.36 4.00
937 1068 2.203070 GGATTGGTCGCGGCAGAT 60.203 61.111 14.93 5.20 0.00 2.90
992 1130 4.666253 AGGCGGCCATGCTGTGTT 62.666 61.111 23.09 0.00 37.24 3.32
1011 1149 4.357947 GACTGCCGTGGCTCGACA 62.358 66.667 12.84 3.93 42.86 4.35
1176 1320 1.366854 CGTCATCGTCCTCGTCCTCA 61.367 60.000 0.00 0.00 38.33 3.86
1182 1326 1.644372 CTCCTCGTCATCGTCCTCG 59.356 63.158 0.00 0.00 38.33 4.63
1191 1338 3.997400 CTCCTCCGGCTCCTCGTCA 62.997 68.421 0.00 0.00 0.00 4.35
1695 1842 1.606531 CTGGCCCTTCTTGGAGGAG 59.393 63.158 0.00 0.00 39.25 3.69
1696 1843 1.925455 CCTGGCCCTTCTTGGAGGA 60.925 63.158 0.00 0.00 39.25 3.71
1697 1844 2.679716 CCTGGCCCTTCTTGGAGG 59.320 66.667 0.00 0.00 38.35 4.30
2214 2531 6.320494 TCTACCAAGCTTCTATCTTCGATC 57.680 41.667 0.00 0.00 0.00 3.69
2220 2537 7.856415 AGAACAAATCTACCAAGCTTCTATCT 58.144 34.615 0.00 0.00 36.32 1.98
2222 2539 8.734386 CAAAGAACAAATCTACCAAGCTTCTAT 58.266 33.333 0.00 0.00 37.42 1.98
2223 2540 7.719633 ACAAAGAACAAATCTACCAAGCTTCTA 59.280 33.333 0.00 0.00 37.42 2.10
2225 2542 6.739112 ACAAAGAACAAATCTACCAAGCTTC 58.261 36.000 0.00 0.00 37.42 3.86
2227 2544 6.064717 AGACAAAGAACAAATCTACCAAGCT 58.935 36.000 0.00 0.00 37.42 3.74
2386 2812 8.585881 AGCTTTACACTACTCTCATTAAGTTCA 58.414 33.333 0.00 0.00 0.00 3.18
2387 2813 8.989653 AGCTTTACACTACTCTCATTAAGTTC 57.010 34.615 0.00 0.00 0.00 3.01
2405 2831 1.270839 TGTCCTGGTGCTGAGCTTTAC 60.271 52.381 5.83 0.00 0.00 2.01
2476 2914 7.469181 GCCATTTTCAAATGCTAGCTAGTACAT 60.469 37.037 21.62 14.17 43.38 2.29
2481 2919 5.163581 ACTGCCATTTTCAAATGCTAGCTAG 60.164 40.000 16.84 16.84 43.38 3.42
2483 2921 3.512724 ACTGCCATTTTCAAATGCTAGCT 59.487 39.130 17.23 0.00 43.38 3.32
2484 2922 3.853475 ACTGCCATTTTCAAATGCTAGC 58.147 40.909 8.10 8.10 43.38 3.42
2504 2942 3.445096 ACCTGCCATTTTCAGATGCTAAC 59.555 43.478 0.00 0.00 33.54 2.34
2505 2943 3.700538 ACCTGCCATTTTCAGATGCTAA 58.299 40.909 0.00 0.00 33.54 3.09
2512 2950 2.608752 GCACTCAACCTGCCATTTTCAG 60.609 50.000 0.00 0.00 0.00 3.02
2515 2953 0.314935 CGCACTCAACCTGCCATTTT 59.685 50.000 0.00 0.00 0.00 1.82
2521 2959 1.560860 GACTGTCGCACTCAACCTGC 61.561 60.000 0.00 0.00 0.00 4.85
2525 2963 0.249911 AAGGGACTGTCGCACTCAAC 60.250 55.000 24.17 0.00 40.86 3.18
2557 3003 0.687354 ACCACCCTCAGCTGTTAGTG 59.313 55.000 14.67 17.56 0.00 2.74
2599 3054 2.263545 GGAAGTAGTGGTGGTAAGGGT 58.736 52.381 0.00 0.00 0.00 4.34
2600 3055 1.206371 CGGAAGTAGTGGTGGTAAGGG 59.794 57.143 0.00 0.00 0.00 3.95
2633 3099 0.964700 TAGCTCGGCTCATCATCCTG 59.035 55.000 1.46 0.00 40.44 3.86
2635 3101 0.389687 GCTAGCTCGGCTCATCATCC 60.390 60.000 7.70 0.00 40.44 3.51
2639 3105 1.067915 CCTAAGCTAGCTCGGCTCATC 60.068 57.143 19.65 0.00 40.44 2.92
2659 3125 5.984233 TCTTATCAATCGTTGTACATGCC 57.016 39.130 0.00 0.00 0.00 4.40
2660 3126 8.299262 ACTATCTTATCAATCGTTGTACATGC 57.701 34.615 0.00 0.00 0.00 4.06
2728 3194 8.964533 ACTAAGAGATGACCCATTATAGACAT 57.035 34.615 0.00 0.00 0.00 3.06
2729 3195 8.228206 AGACTAAGAGATGACCCATTATAGACA 58.772 37.037 0.00 0.00 0.00 3.41
2730 3196 8.644374 AGACTAAGAGATGACCCATTATAGAC 57.356 38.462 0.00 0.00 0.00 2.59
2734 3200 9.836179 AGATAAGACTAAGAGATGACCCATTAT 57.164 33.333 0.00 0.00 0.00 1.28
2735 3201 9.661954 AAGATAAGACTAAGAGATGACCCATTA 57.338 33.333 0.00 0.00 0.00 1.90
2736 3202 8.560124 AAGATAAGACTAAGAGATGACCCATT 57.440 34.615 0.00 0.00 0.00 3.16
2737 3203 8.560124 AAAGATAAGACTAAGAGATGACCCAT 57.440 34.615 0.00 0.00 0.00 4.00
2738 3204 7.979786 AAAGATAAGACTAAGAGATGACCCA 57.020 36.000 0.00 0.00 0.00 4.51
2765 3231 8.609176 CGCCATGTTTTTAAGAATAGCTAGTTA 58.391 33.333 0.00 0.00 0.00 2.24
2766 3232 7.335924 TCGCCATGTTTTTAAGAATAGCTAGTT 59.664 33.333 0.00 0.00 0.00 2.24
2767 3233 6.821665 TCGCCATGTTTTTAAGAATAGCTAGT 59.178 34.615 0.00 0.00 0.00 2.57
2768 3234 7.224753 TCTCGCCATGTTTTTAAGAATAGCTAG 59.775 37.037 0.00 0.00 0.00 3.42
2769 3235 7.011109 GTCTCGCCATGTTTTTAAGAATAGCTA 59.989 37.037 0.00 0.00 0.00 3.32
2770 3236 5.880332 TCTCGCCATGTTTTTAAGAATAGCT 59.120 36.000 0.00 0.00 0.00 3.32
2771 3237 5.965918 GTCTCGCCATGTTTTTAAGAATAGC 59.034 40.000 0.00 0.00 0.00 2.97
2772 3238 7.072177 TGTCTCGCCATGTTTTTAAGAATAG 57.928 36.000 0.00 0.00 0.00 1.73
2773 3239 7.624360 ATGTCTCGCCATGTTTTTAAGAATA 57.376 32.000 0.00 0.00 0.00 1.75
2774 3240 5.957842 TGTCTCGCCATGTTTTTAAGAAT 57.042 34.783 0.00 0.00 0.00 2.40
2775 3241 5.957842 ATGTCTCGCCATGTTTTTAAGAA 57.042 34.783 0.00 0.00 0.00 2.52
2776 3242 7.624360 AATATGTCTCGCCATGTTTTTAAGA 57.376 32.000 0.00 0.00 0.00 2.10
2777 3243 9.385902 CATAATATGTCTCGCCATGTTTTTAAG 57.614 33.333 0.00 0.00 30.20 1.85
2778 3244 7.860373 GCATAATATGTCTCGCCATGTTTTTAA 59.140 33.333 1.92 0.00 30.20 1.52
2779 3245 7.228507 AGCATAATATGTCTCGCCATGTTTTTA 59.771 33.333 1.92 0.00 30.20 1.52
2780 3246 6.039717 AGCATAATATGTCTCGCCATGTTTTT 59.960 34.615 1.92 0.00 30.20 1.94
2781 3247 5.532406 AGCATAATATGTCTCGCCATGTTTT 59.468 36.000 1.92 0.00 30.20 2.43
2782 3248 5.065914 AGCATAATATGTCTCGCCATGTTT 58.934 37.500 1.92 0.00 30.20 2.83
2783 3249 4.645535 AGCATAATATGTCTCGCCATGTT 58.354 39.130 1.92 0.00 32.02 2.71
2784 3250 4.277515 AGCATAATATGTCTCGCCATGT 57.722 40.909 1.92 0.00 0.00 3.21
2785 3251 6.035435 GTCTTAGCATAATATGTCTCGCCATG 59.965 42.308 1.92 0.00 0.00 3.66
2786 3252 6.102663 GTCTTAGCATAATATGTCTCGCCAT 58.897 40.000 1.92 0.00 0.00 4.40
2787 3253 5.010617 TGTCTTAGCATAATATGTCTCGCCA 59.989 40.000 1.92 0.00 0.00 5.69
2788 3254 5.470368 TGTCTTAGCATAATATGTCTCGCC 58.530 41.667 1.92 0.00 0.00 5.54
2789 3255 6.624710 CTGTCTTAGCATAATATGTCTCGC 57.375 41.667 1.92 0.00 0.00 5.03
2807 3273 9.434420 GCTATCTTAGAATAAATGATGCTGTCT 57.566 33.333 0.00 0.00 0.00 3.41
2808 3274 9.212641 TGCTATCTTAGAATAAATGATGCTGTC 57.787 33.333 0.00 0.00 0.00 3.51
2809 3275 9.736414 ATGCTATCTTAGAATAAATGATGCTGT 57.264 29.630 0.00 0.00 0.00 4.40
2811 3277 9.955102 TGATGCTATCTTAGAATAAATGATGCT 57.045 29.630 0.00 0.00 0.00 3.79
2821 3287 8.944029 GCATGTACAATGATGCTATCTTAGAAT 58.056 33.333 11.12 0.00 41.52 2.40
2822 3288 7.388776 GGCATGTACAATGATGCTATCTTAGAA 59.611 37.037 16.47 0.00 43.77 2.10
2823 3289 6.875726 GGCATGTACAATGATGCTATCTTAGA 59.124 38.462 16.47 0.00 43.77 2.10
2824 3290 6.652062 TGGCATGTACAATGATGCTATCTTAG 59.348 38.462 16.47 0.00 43.77 2.18
2825 3291 6.532826 TGGCATGTACAATGATGCTATCTTA 58.467 36.000 16.47 0.00 43.77 2.10
2826 3292 5.379187 TGGCATGTACAATGATGCTATCTT 58.621 37.500 16.47 0.00 43.77 2.40
2827 3293 4.976864 TGGCATGTACAATGATGCTATCT 58.023 39.130 16.47 0.00 43.77 1.98
2828 3294 5.892160 ATGGCATGTACAATGATGCTATC 57.108 39.130 16.47 3.79 41.41 2.08
2829 3295 6.376299 CCTAATGGCATGTACAATGATGCTAT 59.624 38.462 16.47 13.78 45.56 2.97
2830 3296 5.706833 CCTAATGGCATGTACAATGATGCTA 59.293 40.000 16.47 12.24 43.77 3.49
2831 3297 4.521639 CCTAATGGCATGTACAATGATGCT 59.478 41.667 16.47 2.77 43.77 3.79
2832 3298 4.279169 ACCTAATGGCATGTACAATGATGC 59.721 41.667 10.12 10.12 43.60 3.91
2833 3299 5.300034 ACACCTAATGGCATGTACAATGATG 59.700 40.000 0.00 0.00 36.63 3.07
2834 3300 5.448654 ACACCTAATGGCATGTACAATGAT 58.551 37.500 0.00 0.00 36.63 2.45
2835 3301 4.854173 ACACCTAATGGCATGTACAATGA 58.146 39.130 0.00 0.00 36.63 2.57
2836 3302 4.883585 AGACACCTAATGGCATGTACAATG 59.116 41.667 0.00 0.12 39.81 2.82
2837 3303 5.116084 AGACACCTAATGGCATGTACAAT 57.884 39.130 0.00 0.00 39.81 2.71
2838 3304 4.513442 GAGACACCTAATGGCATGTACAA 58.487 43.478 0.00 0.00 39.81 2.41
2839 3305 3.430236 CGAGACACCTAATGGCATGTACA 60.430 47.826 0.00 0.00 39.81 2.90
2840 3306 3.123804 CGAGACACCTAATGGCATGTAC 58.876 50.000 0.00 0.00 39.81 2.90
2841 3307 2.764010 ACGAGACACCTAATGGCATGTA 59.236 45.455 0.00 0.00 39.81 2.29
2842 3308 1.555075 ACGAGACACCTAATGGCATGT 59.445 47.619 0.00 0.00 39.81 3.21
2843 3309 1.935873 CACGAGACACCTAATGGCATG 59.064 52.381 0.00 0.00 39.81 4.06
2844 3310 1.134401 CCACGAGACACCTAATGGCAT 60.134 52.381 0.00 0.00 39.81 4.40
2845 3311 0.249120 CCACGAGACACCTAATGGCA 59.751 55.000 0.00 0.00 39.81 4.92
2846 3312 1.090052 GCCACGAGACACCTAATGGC 61.090 60.000 0.00 0.00 42.66 4.40
2847 3313 0.249120 TGCCACGAGACACCTAATGG 59.751 55.000 0.00 0.00 39.83 3.16
2848 3314 1.066858 ACTGCCACGAGACACCTAATG 60.067 52.381 0.00 0.00 0.00 1.90
2849 3315 1.267121 ACTGCCACGAGACACCTAAT 58.733 50.000 0.00 0.00 0.00 1.73
2850 3316 1.816835 CTACTGCCACGAGACACCTAA 59.183 52.381 0.00 0.00 0.00 2.69
2851 3317 1.460504 CTACTGCCACGAGACACCTA 58.539 55.000 0.00 0.00 0.00 3.08
2852 3318 1.251527 CCTACTGCCACGAGACACCT 61.252 60.000 0.00 0.00 0.00 4.00
2853 3319 1.215647 CCTACTGCCACGAGACACC 59.784 63.158 0.00 0.00 0.00 4.16
2854 3320 1.446272 GCCTACTGCCACGAGACAC 60.446 63.158 0.00 0.00 0.00 3.67
2873 3339 1.302993 GCACCCGGTTTTGGAGCTA 60.303 57.895 0.00 0.00 0.00 3.32
2878 3344 0.031994 CTTCTTGCACCCGGTTTTGG 59.968 55.000 0.00 0.00 0.00 3.28
2946 3424 0.307760 GAGAAAGTGCACCACGGTTG 59.692 55.000 14.63 0.00 39.64 3.77
2949 3427 1.845809 GCAGAGAAAGTGCACCACGG 61.846 60.000 14.63 2.95 40.86 4.94
2951 3429 0.819259 TGGCAGAGAAAGTGCACCAC 60.819 55.000 14.63 5.29 43.12 4.16
2969 3447 7.888424 TGCATGGATATTGTATGATTTCCTTG 58.112 34.615 0.00 0.00 36.38 3.61
2972 3450 6.755141 GCATGCATGGATATTGTATGATTTCC 59.245 38.462 27.34 0.87 38.87 3.13
2973 3451 7.274904 GTGCATGCATGGATATTGTATGATTTC 59.725 37.037 25.64 4.49 38.87 2.17
2977 3456 5.318630 AGTGCATGCATGGATATTGTATGA 58.681 37.500 25.64 0.00 38.87 2.15
2978 3457 5.638596 AGTGCATGCATGGATATTGTATG 57.361 39.130 25.64 0.00 39.36 2.39
3012 3497 3.003482 GTGCATGCAATTGCCAAAAGAAA 59.997 39.130 26.94 6.63 42.06 2.52
3016 3501 2.257691 AGTGCATGCAATTGCCAAAA 57.742 40.000 26.94 9.36 42.06 2.44
3017 3502 2.257691 AAGTGCATGCAATTGCCAAA 57.742 40.000 30.54 9.75 42.06 3.28
3018 3503 2.257691 AAAGTGCATGCAATTGCCAA 57.742 40.000 31.55 10.53 42.06 4.52
3019 3504 2.144730 GAAAAGTGCATGCAATTGCCA 58.855 42.857 31.55 15.22 42.06 4.92
3020 3505 2.419667 AGAAAAGTGCATGCAATTGCC 58.580 42.857 31.55 24.33 42.06 4.52
3021 3506 4.477302 AAAGAAAAGTGCATGCAATTGC 57.523 36.364 31.55 24.99 43.07 3.56
3022 3507 6.295039 AGAAAAGAAAAGTGCATGCAATTG 57.705 33.333 31.55 0.00 34.34 2.32
3023 3508 6.930667 AAGAAAAGAAAAGTGCATGCAATT 57.069 29.167 26.47 26.47 35.67 2.32
3024 3509 6.930667 AAAGAAAAGAAAAGTGCATGCAAT 57.069 29.167 24.58 20.35 0.00 3.56
3025 3510 6.740411 AAAAGAAAAGAAAAGTGCATGCAA 57.260 29.167 24.58 3.50 0.00 4.08
3026 3511 6.740411 AAAAAGAAAAGAAAAGTGCATGCA 57.260 29.167 18.46 18.46 0.00 3.96
3059 3545 0.661187 CACAAGAAAAGCGCACGCAT 60.661 50.000 18.24 1.53 44.88 4.73
3063 3549 0.661483 GAGCCACAAGAAAAGCGCAC 60.661 55.000 11.47 0.00 0.00 5.34
3120 3606 1.153289 ATCCAGCGGCTACAAGCAG 60.153 57.895 0.26 0.00 44.75 4.24
3121 3607 1.450134 CATCCAGCGGCTACAAGCA 60.450 57.895 0.26 0.00 44.75 3.91
3122 3608 2.828128 GCATCCAGCGGCTACAAGC 61.828 63.158 0.26 1.26 41.46 4.01
3123 3609 3.414272 GCATCCAGCGGCTACAAG 58.586 61.111 0.26 0.00 0.00 3.16
3169 3655 7.060174 GCAACGTTTTGTATTATTGGTGTACAG 59.940 37.037 0.00 0.00 34.90 2.74
3170 3656 6.856938 GCAACGTTTTGTATTATTGGTGTACA 59.143 34.615 0.00 0.00 34.90 2.90
3171 3657 7.079475 AGCAACGTTTTGTATTATTGGTGTAC 58.921 34.615 0.00 0.00 34.90 2.90
3173 3659 6.079424 AGCAACGTTTTGTATTATTGGTGT 57.921 33.333 0.00 0.00 34.90 4.16
3175 3661 6.150474 AGCTAGCAACGTTTTGTATTATTGGT 59.850 34.615 18.83 0.00 34.90 3.67
3176 3662 6.551736 AGCTAGCAACGTTTTGTATTATTGG 58.448 36.000 18.83 0.00 34.90 3.16
3177 3663 7.464358 AGAGCTAGCAACGTTTTGTATTATTG 58.536 34.615 18.83 0.00 34.90 1.90
3178 3664 7.611213 AGAGCTAGCAACGTTTTGTATTATT 57.389 32.000 18.83 0.00 34.90 1.40
3179 3665 7.414098 CCAAGAGCTAGCAACGTTTTGTATTAT 60.414 37.037 18.83 0.00 34.90 1.28
3181 3667 5.334879 CCAAGAGCTAGCAACGTTTTGTATT 60.335 40.000 18.83 0.00 34.90 1.89
3182 3668 4.154195 CCAAGAGCTAGCAACGTTTTGTAT 59.846 41.667 18.83 0.00 34.90 2.29
3183 3669 3.496884 CCAAGAGCTAGCAACGTTTTGTA 59.503 43.478 18.83 0.00 34.90 2.41
3185 3671 2.548057 TCCAAGAGCTAGCAACGTTTTG 59.452 45.455 18.83 7.67 35.62 2.44
3227 3796 4.356442 CAAAACCTTGCCGCGGGG 62.356 66.667 29.38 22.24 0.00 5.73
3272 3841 1.541233 CCTTGCTCTATACCCAAGCCG 60.541 57.143 0.00 0.00 35.74 5.52
3273 3842 1.768870 TCCTTGCTCTATACCCAAGCC 59.231 52.381 0.00 0.00 35.74 4.35
3274 3843 2.170607 TGTCCTTGCTCTATACCCAAGC 59.829 50.000 0.00 0.00 35.74 4.01
3275 3844 4.487714 TTGTCCTTGCTCTATACCCAAG 57.512 45.455 0.00 0.00 36.58 3.61
3293 3862 6.441274 CAATTATATGGCTCGCTTGATTTGT 58.559 36.000 0.00 0.00 0.00 2.83
3294 3863 5.860182 CCAATTATATGGCTCGCTTGATTTG 59.140 40.000 0.00 0.00 32.78 2.32
3295 3864 5.769662 TCCAATTATATGGCTCGCTTGATTT 59.230 36.000 0.00 0.00 40.46 2.17
3298 3867 4.318332 CTCCAATTATATGGCTCGCTTGA 58.682 43.478 0.00 0.00 40.46 3.02
3327 3899 1.669760 GGTTGGCCACACGATCGAA 60.670 57.895 24.34 0.00 34.09 3.71
3328 3900 2.047655 GGTTGGCCACACGATCGA 60.048 61.111 24.34 0.00 34.09 3.59
3330 3902 3.799755 GCGGTTGGCCACACGATC 61.800 66.667 27.13 10.42 34.80 3.69
3378 3951 6.663953 AGAGTTACTATTGAACTGGTGCTAGA 59.336 38.462 0.00 0.00 37.27 2.43
3379 3952 6.868622 AGAGTTACTATTGAACTGGTGCTAG 58.131 40.000 0.00 0.00 37.27 3.42
3380 3953 6.852420 AGAGTTACTATTGAACTGGTGCTA 57.148 37.500 0.00 0.00 37.27 3.49
3381 3954 5.746990 AGAGTTACTATTGAACTGGTGCT 57.253 39.130 0.00 0.00 37.27 4.40
3382 3955 6.631962 AGTAGAGTTACTATTGAACTGGTGC 58.368 40.000 0.00 0.00 38.35 5.01
3414 3987 7.201803 GGGGACTATAGGTTATAGCTGTAATCG 60.202 44.444 6.18 0.00 41.43 3.34
3426 4002 6.964086 AGTTTCTTTCAGGGGACTATAGGTTA 59.036 38.462 4.43 0.00 40.21 2.85
3512 4088 8.641498 AGGCACTATGATTTATAATCCCTTTG 57.359 34.615 0.00 0.00 36.02 2.77
3513 4089 9.082313 CAAGGCACTATGATTTATAATCCCTTT 57.918 33.333 0.00 0.00 38.49 3.11
3514 4090 8.227507 ACAAGGCACTATGATTTATAATCCCTT 58.772 33.333 0.00 0.00 38.49 3.95
3515 4091 7.667219 CACAAGGCACTATGATTTATAATCCCT 59.333 37.037 0.00 0.00 38.49 4.20
3516 4092 7.094205 CCACAAGGCACTATGATTTATAATCCC 60.094 40.741 0.00 0.00 38.49 3.85
3517 4093 7.448469 ACCACAAGGCACTATGATTTATAATCC 59.552 37.037 0.00 0.00 38.49 3.01
3518 4094 8.396272 ACCACAAGGCACTATGATTTATAATC 57.604 34.615 0.00 0.00 38.49 1.75
3519 4095 8.632679 CAACCACAAGGCACTATGATTTATAAT 58.367 33.333 0.00 0.00 38.49 1.28
3520 4096 7.068103 CCAACCACAAGGCACTATGATTTATAA 59.932 37.037 0.00 0.00 38.49 0.98
3521 4097 6.545666 CCAACCACAAGGCACTATGATTTATA 59.454 38.462 0.00 0.00 38.49 0.98
3522 4098 5.360714 CCAACCACAAGGCACTATGATTTAT 59.639 40.000 0.00 0.00 38.49 1.40
3523 4099 4.704540 CCAACCACAAGGCACTATGATTTA 59.295 41.667 0.00 0.00 38.49 1.40
3524 4100 3.511146 CCAACCACAAGGCACTATGATTT 59.489 43.478 0.00 0.00 38.49 2.17
3525 4101 3.091545 CCAACCACAAGGCACTATGATT 58.908 45.455 0.00 0.00 38.49 2.57
3526 4102 2.621407 CCCAACCACAAGGCACTATGAT 60.621 50.000 0.00 0.00 38.49 2.45
3527 4103 1.271871 CCCAACCACAAGGCACTATGA 60.272 52.381 0.00 0.00 38.49 2.15
3528 4104 1.176527 CCCAACCACAAGGCACTATG 58.823 55.000 0.00 0.00 38.49 2.23
3529 4105 0.777446 ACCCAACCACAAGGCACTAT 59.223 50.000 0.00 0.00 38.49 2.12
3530 4106 0.553819 AACCCAACCACAAGGCACTA 59.446 50.000 0.00 0.00 38.49 2.74
3532 4108 1.040339 TGAACCCAACCACAAGGCAC 61.040 55.000 0.00 0.00 39.06 5.01
3533 4109 1.040339 GTGAACCCAACCACAAGGCA 61.040 55.000 0.00 0.00 39.06 4.75
3534 4110 1.040339 TGTGAACCCAACCACAAGGC 61.040 55.000 0.00 0.00 39.97 4.35
3538 4114 1.397672 CACATGTGAACCCAACCACA 58.602 50.000 21.64 0.00 45.85 4.17
3539 4115 0.031994 GCACATGTGAACCCAACCAC 59.968 55.000 29.80 3.51 0.00 4.16
3545 4121 2.069465 TTGTGCGCACATGTGAACCC 62.069 55.000 40.78 12.26 41.52 4.11
3559 4135 2.645730 TGTTGGTTCACTGTTTGTGC 57.354 45.000 0.00 0.00 45.81 4.57
3564 4150 6.524101 ACTACATTTTGTTGGTTCACTGTT 57.476 33.333 0.00 0.00 0.00 3.16
3575 4161 7.328737 GTCGACTGAGTGATACTACATTTTGTT 59.671 37.037 8.70 0.00 0.00 2.83
3591 4177 1.893801 CTAAACCCCAGTCGACTGAGT 59.106 52.381 40.21 32.49 46.59 3.41
3603 4207 6.812879 ATTAATACGCTATTGCTAAACCCC 57.187 37.500 0.00 0.00 36.97 4.95
3604 4208 9.821662 CTTTATTAATACGCTATTGCTAAACCC 57.178 33.333 0.00 0.00 36.97 4.11
3631 4235 5.163683 CCTGTTTGAATCTTGGCTACATCAG 60.164 44.000 0.00 0.00 0.00 2.90
3632 4236 4.701651 CCTGTTTGAATCTTGGCTACATCA 59.298 41.667 0.00 0.00 0.00 3.07
3633 4237 4.096984 CCCTGTTTGAATCTTGGCTACATC 59.903 45.833 0.00 0.00 0.00 3.06
3716 4735 5.221581 TGTTTAGCTTTTCCGACTTAGTCCT 60.222 40.000 6.80 0.00 0.00 3.85
3800 4820 7.116948 CACTAGTAATTTGTCCAGTGAGACTTG 59.883 40.741 0.00 0.00 36.37 3.16
3828 4857 2.106511 TGCCTACTTGCTTTTGACCTCT 59.893 45.455 0.00 0.00 0.00 3.69
3924 4953 1.070758 TGCTGCTAGATTCCGATTCCC 59.929 52.381 0.00 0.00 0.00 3.97
3947 4976 6.767902 TGGAATATTCAGCAGAAAGTATCCAC 59.232 38.462 17.07 0.00 37.29 4.02
3999 5032 1.378250 AAGCAAGCTAGCAGCCCAG 60.378 57.895 23.38 6.22 43.77 4.45
4000 5033 1.676635 CAAGCAAGCTAGCAGCCCA 60.677 57.895 23.38 0.00 43.77 5.36
4001 5034 3.061260 GCAAGCAAGCTAGCAGCCC 62.061 63.158 23.38 11.98 43.77 5.19
4002 5035 2.488820 GCAAGCAAGCTAGCAGCC 59.511 61.111 23.38 9.04 43.77 4.85
4003 5036 2.488820 GGCAAGCAAGCTAGCAGC 59.511 61.111 18.83 19.87 42.84 5.25
4004 5037 1.742880 TCGGCAAGCAAGCTAGCAG 60.743 57.895 18.83 10.24 36.85 4.24
4009 5042 1.383456 TTTGTGTCGGCAAGCAAGCT 61.383 50.000 0.00 0.00 34.17 3.74
4051 5085 3.183754 GGCACTTAACAAAGCAACGTTT 58.816 40.909 0.00 0.00 0.00 3.60
4057 5091 0.187361 AGGGGGCACTTAACAAAGCA 59.813 50.000 0.00 0.00 0.00 3.91
4058 5092 0.888619 GAGGGGGCACTTAACAAAGC 59.111 55.000 0.00 0.00 0.00 3.51
4077 5114 0.315251 TCAGTTCTCACGGAGCACAG 59.685 55.000 6.50 0.08 28.72 3.66
4086 5123 5.773575 TGTACATGTCTTCTCAGTTCTCAC 58.226 41.667 0.00 0.00 0.00 3.51
4093 5130 9.516314 TCGTATAAAATGTACATGTCTTCTCAG 57.484 33.333 9.63 0.00 0.00 3.35
4094 5131 9.863845 TTCGTATAAAATGTACATGTCTTCTCA 57.136 29.630 9.63 0.00 0.00 3.27
4099 5136 9.647797 TTGACTTCGTATAAAATGTACATGTCT 57.352 29.630 9.63 0.00 0.00 3.41
4105 5142 9.866936 TGTTGTTTGACTTCGTATAAAATGTAC 57.133 29.630 0.00 0.00 0.00 2.90
4106 5143 9.866936 GTGTTGTTTGACTTCGTATAAAATGTA 57.133 29.630 0.00 0.00 0.00 2.29
4107 5144 8.399425 TGTGTTGTTTGACTTCGTATAAAATGT 58.601 29.630 0.00 0.00 0.00 2.71
4108 5145 8.775220 TGTGTTGTTTGACTTCGTATAAAATG 57.225 30.769 0.00 0.00 0.00 2.32
4111 5148 7.429920 GCTTTGTGTTGTTTGACTTCGTATAAA 59.570 33.333 0.00 0.00 0.00 1.40
4112 5149 6.908284 GCTTTGTGTTGTTTGACTTCGTATAA 59.092 34.615 0.00 0.00 0.00 0.98
4113 5150 6.259167 AGCTTTGTGTTGTTTGACTTCGTATA 59.741 34.615 0.00 0.00 0.00 1.47
4115 5152 4.393680 AGCTTTGTGTTGTTTGACTTCGTA 59.606 37.500 0.00 0.00 0.00 3.43
4116 5153 3.190535 AGCTTTGTGTTGTTTGACTTCGT 59.809 39.130 0.00 0.00 0.00 3.85
4117 5154 3.758300 AGCTTTGTGTTGTTTGACTTCG 58.242 40.909 0.00 0.00 0.00 3.79
4118 5155 5.160641 TCAAGCTTTGTGTTGTTTGACTTC 58.839 37.500 0.00 0.00 30.59 3.01
4119 5156 5.132897 TCAAGCTTTGTGTTGTTTGACTT 57.867 34.783 0.00 0.00 30.59 3.01
4120 5157 4.782019 TCAAGCTTTGTGTTGTTTGACT 57.218 36.364 0.00 0.00 30.59 3.41
4121 5158 5.101628 TGATCAAGCTTTGTGTTGTTTGAC 58.898 37.500 0.00 0.00 36.53 3.18
4122 5159 5.321959 TGATCAAGCTTTGTGTTGTTTGA 57.678 34.783 0.00 0.00 37.68 2.69
4131 5168 7.288810 TCCTGTAAATTTGATCAAGCTTTGT 57.711 32.000 20.11 0.00 0.00 2.83
4152 5189 8.877195 TCTATTTGAGTTACTGGTACTTTTCCT 58.123 33.333 0.00 0.00 0.00 3.36
4223 5263 9.236006 TCATATATTTAGGAACGGAGGTAGTAC 57.764 37.037 0.00 0.00 0.00 2.73
4225 5265 7.949006 AGTCATATATTTAGGAACGGAGGTAGT 59.051 37.037 0.00 0.00 0.00 2.73
4226 5266 8.350852 AGTCATATATTTAGGAACGGAGGTAG 57.649 38.462 0.00 0.00 0.00 3.18
4228 5268 7.613551 AAGTCATATATTTAGGAACGGAGGT 57.386 36.000 0.00 0.00 0.00 3.85
4231 5271 9.938280 CCATAAAGTCATATATTTAGGAACGGA 57.062 33.333 0.00 0.00 0.00 4.69
4233 5273 8.380644 CGCCATAAAGTCATATATTTAGGAACG 58.619 37.037 0.00 0.00 0.00 3.95
4234 5274 8.665685 CCGCCATAAAGTCATATATTTAGGAAC 58.334 37.037 0.00 0.00 0.00 3.62
4235 5275 8.380099 ACCGCCATAAAGTCATATATTTAGGAA 58.620 33.333 0.00 0.00 0.00 3.36
4236 5276 7.913789 ACCGCCATAAAGTCATATATTTAGGA 58.086 34.615 0.00 0.00 0.00 2.94
4237 5277 8.561738 AACCGCCATAAAGTCATATATTTAGG 57.438 34.615 0.00 0.00 0.00 2.69
4240 5280 9.569122 ACTAAACCGCCATAAAGTCATATATTT 57.431 29.630 0.00 0.00 0.00 1.40
4241 5281 8.999431 CACTAAACCGCCATAAAGTCATATATT 58.001 33.333 0.00 0.00 0.00 1.28
4242 5282 8.154856 ACACTAAACCGCCATAAAGTCATATAT 58.845 33.333 0.00 0.00 0.00 0.86
4243 5283 7.502696 ACACTAAACCGCCATAAAGTCATATA 58.497 34.615 0.00 0.00 0.00 0.86
4244 5284 6.354130 ACACTAAACCGCCATAAAGTCATAT 58.646 36.000 0.00 0.00 0.00 1.78
4245 5285 5.736813 ACACTAAACCGCCATAAAGTCATA 58.263 37.500 0.00 0.00 0.00 2.15
4246 5286 4.585879 ACACTAAACCGCCATAAAGTCAT 58.414 39.130 0.00 0.00 0.00 3.06
4247 5287 4.010667 ACACTAAACCGCCATAAAGTCA 57.989 40.909 0.00 0.00 0.00 3.41
4248 5288 5.366829 AAACACTAAACCGCCATAAAGTC 57.633 39.130 0.00 0.00 0.00 3.01
4249 5289 5.777850 AAAACACTAAACCGCCATAAAGT 57.222 34.783 0.00 0.00 0.00 2.66
4250 5290 8.643752 CAAATAAAACACTAAACCGCCATAAAG 58.356 33.333 0.00 0.00 0.00 1.85
4251 5291 8.142551 ACAAATAAAACACTAAACCGCCATAAA 58.857 29.630 0.00 0.00 0.00 1.40
4252 5292 7.659186 ACAAATAAAACACTAAACCGCCATAA 58.341 30.769 0.00 0.00 0.00 1.90
4253 5293 7.216973 ACAAATAAAACACTAAACCGCCATA 57.783 32.000 0.00 0.00 0.00 2.74
4254 5294 6.091718 ACAAATAAAACACTAAACCGCCAT 57.908 33.333 0.00 0.00 0.00 4.40
4255 5295 5.517322 ACAAATAAAACACTAAACCGCCA 57.483 34.783 0.00 0.00 0.00 5.69
4256 5296 5.978322 TCAACAAATAAAACACTAAACCGCC 59.022 36.000 0.00 0.00 0.00 6.13
4257 5297 7.631915 ATCAACAAATAAAACACTAAACCGC 57.368 32.000 0.00 0.00 0.00 5.68
4258 5298 9.887406 ACTATCAACAAATAAAACACTAAACCG 57.113 29.630 0.00 0.00 0.00 4.44
4273 5313 8.740123 TGACCACTTAAGAAACTATCAACAAA 57.260 30.769 10.09 0.00 0.00 2.83
4281 5321 8.514330 ACAATGTTTGACCACTTAAGAAACTA 57.486 30.769 10.09 1.45 0.00 2.24
4336 5380 4.302067 AGAGATGCTCCCTCCTTTGATTA 58.698 43.478 0.00 0.00 0.00 1.75
4341 5385 7.147230 ACAATAATTAGAGATGCTCCCTCCTTT 60.147 37.037 0.00 0.00 0.00 3.11
4370 5415 5.501156 AGAGTCACCCCTTTGCTAATTAAG 58.499 41.667 0.00 0.00 0.00 1.85
4372 5417 6.824958 ATAGAGTCACCCCTTTGCTAATTA 57.175 37.500 0.00 0.00 0.00 1.40
4373 5418 5.717119 ATAGAGTCACCCCTTTGCTAATT 57.283 39.130 0.00 0.00 0.00 1.40
4374 5419 6.013293 GGATATAGAGTCACCCCTTTGCTAAT 60.013 42.308 0.00 0.00 0.00 1.73
4375 5420 5.307196 GGATATAGAGTCACCCCTTTGCTAA 59.693 44.000 0.00 0.00 0.00 3.09
4377 5422 3.648545 GGATATAGAGTCACCCCTTTGCT 59.351 47.826 0.00 0.00 0.00 3.91
4379 5424 6.498651 ACATAGGATATAGAGTCACCCCTTTG 59.501 42.308 0.00 0.00 0.00 2.77
4381 5426 6.234404 ACATAGGATATAGAGTCACCCCTT 57.766 41.667 0.00 0.00 0.00 3.95
4384 5429 8.550585 AGTAGTACATAGGATATAGAGTCACCC 58.449 40.741 2.52 0.00 0.00 4.61
4391 5437 9.794753 TGGAGGTAGTAGTACATAGGATATAGA 57.205 37.037 9.89 0.00 0.00 1.98
4412 5564 3.721087 ACTTGTAAACCCAGATGGAGG 57.279 47.619 0.00 0.00 37.39 4.30
4415 5567 4.034285 AGGAACTTGTAAACCCAGATGG 57.966 45.455 0.00 0.00 35.39 3.51
4442 5594 5.710099 TGGTTAAAATTTGGGCACACAAAAA 59.290 32.000 1.59 0.00 42.91 1.94
4443 5595 5.253330 TGGTTAAAATTTGGGCACACAAAA 58.747 33.333 1.59 0.00 42.91 2.44
4444 5596 4.843728 TGGTTAAAATTTGGGCACACAAA 58.156 34.783 0.00 0.00 43.69 2.83
4445 5597 4.487714 TGGTTAAAATTTGGGCACACAA 57.512 36.364 0.00 0.00 0.00 3.33
4579 5731 9.554395 CCCCTTGTATTTTGTCAAACTTTAAAT 57.446 29.630 0.00 0.00 0.00 1.40
4580 5732 8.541234 ACCCCTTGTATTTTGTCAAACTTTAAA 58.459 29.630 0.00 0.00 0.00 1.52
4581 5733 8.080363 ACCCCTTGTATTTTGTCAAACTTTAA 57.920 30.769 0.00 0.00 0.00 1.52
4582 5734 7.201929 GGACCCCTTGTATTTTGTCAAACTTTA 60.202 37.037 0.00 0.00 0.00 1.85
4583 5735 6.407639 GGACCCCTTGTATTTTGTCAAACTTT 60.408 38.462 0.00 0.00 0.00 2.66
4584 5736 5.069914 GGACCCCTTGTATTTTGTCAAACTT 59.930 40.000 0.00 0.00 0.00 2.66
4585 5737 4.587262 GGACCCCTTGTATTTTGTCAAACT 59.413 41.667 0.00 0.00 0.00 2.66
4586 5738 4.557895 CGGACCCCTTGTATTTTGTCAAAC 60.558 45.833 0.00 0.00 0.00 2.93
4587 5739 3.570550 CGGACCCCTTGTATTTTGTCAAA 59.429 43.478 0.00 0.00 0.00 2.69
4588 5740 3.150767 CGGACCCCTTGTATTTTGTCAA 58.849 45.455 0.00 0.00 0.00 3.18
4589 5741 2.372504 TCGGACCCCTTGTATTTTGTCA 59.627 45.455 0.00 0.00 0.00 3.58
4590 5742 3.007635 CTCGGACCCCTTGTATTTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
4591 5743 2.878526 GCTCGGACCCCTTGTATTTTGT 60.879 50.000 0.00 0.00 0.00 2.83
4592 5744 1.743394 GCTCGGACCCCTTGTATTTTG 59.257 52.381 0.00 0.00 0.00 2.44
4593 5745 1.633945 AGCTCGGACCCCTTGTATTTT 59.366 47.619 0.00 0.00 0.00 1.82
4594 5746 1.286248 AGCTCGGACCCCTTGTATTT 58.714 50.000 0.00 0.00 0.00 1.40
4595 5747 1.761198 GTAGCTCGGACCCCTTGTATT 59.239 52.381 0.00 0.00 0.00 1.89
4596 5748 1.411041 GTAGCTCGGACCCCTTGTAT 58.589 55.000 0.00 0.00 0.00 2.29
4597 5749 1.033746 CGTAGCTCGGACCCCTTGTA 61.034 60.000 0.00 0.00 35.71 2.41
4598 5750 2.348888 CGTAGCTCGGACCCCTTGT 61.349 63.158 0.00 0.00 35.71 3.16
4599 5751 2.494918 CGTAGCTCGGACCCCTTG 59.505 66.667 0.00 0.00 35.71 3.61
4750 6752 8.410912 ACTAATTCGGCCCTTACAATTTAAATC 58.589 33.333 0.10 0.00 0.00 2.17
4759 6761 5.607477 CAGAATACTAATTCGGCCCTTACA 58.393 41.667 0.00 0.00 45.24 2.41
4805 6813 1.135972 CATGTGTTGCCGTAGAGTTGC 60.136 52.381 0.00 0.00 0.00 4.17
4812 6820 0.913205 ATACCCCATGTGTTGCCGTA 59.087 50.000 0.00 0.00 0.00 4.02
4813 6821 0.393808 GATACCCCATGTGTTGCCGT 60.394 55.000 0.00 0.00 0.00 5.68
4815 6824 1.956477 GATGATACCCCATGTGTTGCC 59.044 52.381 0.00 0.00 0.00 4.52
4824 6833 3.699025 TGGTGACTAGATGATACCCCA 57.301 47.619 0.00 0.00 0.00 4.96
4983 7618 2.742372 CACCAGCACCAGTACCGC 60.742 66.667 0.00 0.00 0.00 5.68
5010 7645 2.128535 TCTAGGACCTCGATCTCCACT 58.871 52.381 0.00 0.00 0.00 4.00
5301 8069 1.623081 CGACGGTGTTCATGAACGGG 61.623 60.000 28.55 22.27 43.94 5.28
5598 8366 3.844090 GCGAGGTGGGAGAGGCTC 61.844 72.222 6.34 6.34 0.00 4.70
6273 9071 2.995574 AACCTCCACCCGTCCTCG 60.996 66.667 0.00 0.00 0.00 4.63
6469 9270 4.503643 GCTACGTACTAGAGGAGGAGACAT 60.504 50.000 0.00 0.00 0.00 3.06
6470 9271 3.181467 GCTACGTACTAGAGGAGGAGACA 60.181 52.174 0.00 0.00 0.00 3.41
6471 9272 3.181467 TGCTACGTACTAGAGGAGGAGAC 60.181 52.174 0.00 0.00 0.00 3.36
6472 9273 3.036819 TGCTACGTACTAGAGGAGGAGA 58.963 50.000 0.00 0.00 0.00 3.71
6476 9277 2.879026 TGCATGCTACGTACTAGAGGAG 59.121 50.000 20.33 0.00 0.00 3.69
6477 9278 2.927028 TGCATGCTACGTACTAGAGGA 58.073 47.619 20.33 0.00 0.00 3.71
6478 9279 3.569548 CATGCATGCTACGTACTAGAGG 58.430 50.000 20.33 0.00 0.00 3.69
6515 9316 0.523125 TCGACGCGGTGGTATTTACG 60.523 55.000 12.47 0.46 0.00 3.18
6516 9317 0.916581 GTCGACGCGGTGGTATTTAC 59.083 55.000 12.47 0.00 0.00 2.01
6517 9318 0.523125 CGTCGACGCGGTGGTATTTA 60.523 55.000 26.59 0.00 0.00 1.40
6518 9319 1.802715 CGTCGACGCGGTGGTATTT 60.803 57.895 26.59 0.00 0.00 1.40
6621 9422 6.763135 ACAGAGTATAATTCATGCAATCACGT 59.237 34.615 0.00 0.00 0.00 4.49
6622 9423 7.182361 ACAGAGTATAATTCATGCAATCACG 57.818 36.000 0.00 0.00 0.00 4.35
6623 9424 8.715998 CCTACAGAGTATAATTCATGCAATCAC 58.284 37.037 0.00 0.00 0.00 3.06
6624 9425 8.432013 ACCTACAGAGTATAATTCATGCAATCA 58.568 33.333 0.00 0.00 0.00 2.57
6715 9534 1.659098 CGCGTAAACCTCACATCCTTC 59.341 52.381 0.00 0.00 0.00 3.46
6726 9545 2.319841 AACCGAAGCCGCGTAAACC 61.320 57.895 4.92 0.00 0.00 3.27
6898 9806 5.045140 AGGCTACTGGGCAAAAATTAGAGTA 60.045 40.000 0.00 0.00 43.56 2.59
7010 9918 9.500864 AAATTGTTATTTGTTTCAACACAATGC 57.499 25.926 6.34 0.00 38.92 3.56
7051 9959 6.100404 TGATTTCCATTGTTCTTTTCTGGG 57.900 37.500 0.00 0.00 0.00 4.45
7055 9963 9.696917 ACTAACATGATTTCCATTGTTCTTTTC 57.303 29.630 0.00 0.00 31.94 2.29
7091 9999 7.431249 CCCGCATGTCTAGTTTACTCTTAATA 58.569 38.462 0.00 0.00 0.00 0.98
7097 10674 2.202566 GCCCGCATGTCTAGTTTACTC 58.797 52.381 0.00 0.00 0.00 2.59
7104 10681 3.402110 TGAATAATGCCCGCATGTCTAG 58.598 45.455 2.31 0.00 36.68 2.43
7109 10686 3.646611 TTGATGAATAATGCCCGCATG 57.353 42.857 2.31 0.00 36.68 4.06
7113 10690 5.261209 TCCTTTTTGATGAATAATGCCCG 57.739 39.130 0.00 0.00 0.00 6.13
7119 10696 6.601613 ACGCATACCTCCTTTTTGATGAATAA 59.398 34.615 0.00 0.00 0.00 1.40
7173 10750 1.798223 TGCTCAAAATCTCAACGACGG 59.202 47.619 0.00 0.00 0.00 4.79
7180 10757 3.698539 TGTTTGTGGTGCTCAAAATCTCA 59.301 39.130 0.00 0.00 36.71 3.27
7183 10760 4.180057 TGTTGTTTGTGGTGCTCAAAATC 58.820 39.130 0.00 0.00 36.71 2.17
7301 10878 0.319813 CTTTCTTTTTGGGCCCGCTG 60.320 55.000 19.37 5.48 0.00 5.18
7305 10882 1.269723 CTCGACTTTCTTTTTGGGCCC 59.730 52.381 17.59 17.59 0.00 5.80
7308 10885 3.667960 CGCATCTCGACTTTCTTTTTGGG 60.668 47.826 0.00 0.00 41.67 4.12
7323 10900 1.224965 GCCCTTGAAGATCGCATCTC 58.775 55.000 0.00 0.00 39.08 2.75
7324 10901 0.543277 TGCCCTTGAAGATCGCATCT 59.457 50.000 0.00 0.00 42.61 2.90
7350 10927 5.977635 ACAGAACCGTGATGATATTCTCAA 58.022 37.500 0.00 0.00 37.44 3.02
7351 10928 5.598416 ACAGAACCGTGATGATATTCTCA 57.402 39.130 0.00 0.00 38.53 3.27
7352 10929 6.313905 ACAAACAGAACCGTGATGATATTCTC 59.686 38.462 0.00 0.00 0.00 2.87
7355 10932 5.937540 TGACAAACAGAACCGTGATGATATT 59.062 36.000 0.00 0.00 0.00 1.28
7357 10934 4.688879 GTGACAAACAGAACCGTGATGATA 59.311 41.667 0.00 0.00 0.00 2.15
7359 10936 2.869801 GTGACAAACAGAACCGTGATGA 59.130 45.455 0.00 0.00 0.00 2.92
7360 10937 2.032030 GGTGACAAACAGAACCGTGATG 60.032 50.000 0.00 0.00 0.00 3.07
7362 10939 1.066071 TGGTGACAAACAGAACCGTGA 60.066 47.619 0.00 0.00 37.44 4.35
7363 10940 1.063469 GTGGTGACAAACAGAACCGTG 59.937 52.381 0.00 0.00 46.06 4.94
7364 10941 1.375551 GTGGTGACAAACAGAACCGT 58.624 50.000 0.00 0.00 46.06 4.83
7366 10943 0.661020 CGGTGGTGACAAACAGAACC 59.339 55.000 0.00 0.00 46.06 3.62
7367 10944 1.329599 GTCGGTGGTGACAAACAGAAC 59.670 52.381 0.00 0.00 46.06 3.01
7368 10945 1.658994 GTCGGTGGTGACAAACAGAA 58.341 50.000 0.00 0.00 46.06 3.02
7369 10946 0.179067 GGTCGGTGGTGACAAACAGA 60.179 55.000 0.00 0.00 46.06 3.41
7370 10947 1.495584 CGGTCGGTGGTGACAAACAG 61.496 60.000 0.00 0.00 46.06 3.16
7371 10948 1.521906 CGGTCGGTGGTGACAAACA 60.522 57.895 0.00 0.00 46.06 2.83
7372 10949 1.522130 ACGGTCGGTGGTGACAAAC 60.522 57.895 0.00 0.00 46.06 2.93
7373 10950 1.521906 CACGGTCGGTGGTGACAAA 60.522 57.895 2.66 0.00 46.06 2.83
7374 10951 2.107343 CACGGTCGGTGGTGACAA 59.893 61.111 2.66 0.00 46.06 3.18
7382 10959 2.114488 TATTTGGTGGCACGGTCGGT 62.114 55.000 12.17 0.00 0.00 4.69
7383 10960 0.956410 TTATTTGGTGGCACGGTCGG 60.956 55.000 12.17 0.00 0.00 4.79
7384 10961 0.446222 CTTATTTGGTGGCACGGTCG 59.554 55.000 12.17 0.00 0.00 4.79
7385 10962 0.170339 GCTTATTTGGTGGCACGGTC 59.830 55.000 12.17 0.00 0.00 4.79
7386 10963 1.248101 GGCTTATTTGGTGGCACGGT 61.248 55.000 12.17 0.00 0.00 4.83
7390 10967 0.034960 TAGCGGCTTATTTGGTGGCA 60.035 50.000 8.26 0.00 0.00 4.92
7391 10968 1.318576 ATAGCGGCTTATTTGGTGGC 58.681 50.000 8.26 0.00 0.00 5.01
7392 10969 2.948979 TCAATAGCGGCTTATTTGGTGG 59.051 45.455 8.26 0.00 0.00 4.61
7393 10970 3.548818 GCTCAATAGCGGCTTATTTGGTG 60.549 47.826 8.26 8.23 39.39 4.17
7394 10971 2.618709 GCTCAATAGCGGCTTATTTGGT 59.381 45.455 8.26 0.00 39.39 3.67
7395 10972 3.273919 GCTCAATAGCGGCTTATTTGG 57.726 47.619 8.26 6.09 39.39 3.28
7408 10985 5.453567 AGACGCATACTACATGCTCAATA 57.546 39.130 7.55 0.00 42.50 1.90
7409 10986 4.327982 AGACGCATACTACATGCTCAAT 57.672 40.909 7.55 0.00 42.50 2.57
7411 10988 5.222631 CAATAGACGCATACTACATGCTCA 58.777 41.667 7.55 0.00 42.50 4.26
7412 10989 4.623167 CCAATAGACGCATACTACATGCTC 59.377 45.833 7.55 4.67 42.50 4.26
7413 10990 4.560128 CCAATAGACGCATACTACATGCT 58.440 43.478 7.55 0.00 42.50 3.79
7415 10992 3.679980 GCCCAATAGACGCATACTACATG 59.320 47.826 0.00 0.00 0.00 3.21
7416 10993 3.323691 TGCCCAATAGACGCATACTACAT 59.676 43.478 0.00 0.00 0.00 2.29
7417 10994 2.696187 TGCCCAATAGACGCATACTACA 59.304 45.455 0.00 0.00 0.00 2.74
7418 10995 3.243771 ACTGCCCAATAGACGCATACTAC 60.244 47.826 0.00 0.00 0.00 2.73
7419 10996 2.963101 ACTGCCCAATAGACGCATACTA 59.037 45.455 0.00 0.00 0.00 1.82
7421 10998 2.240493 ACTGCCCAATAGACGCATAC 57.760 50.000 0.00 0.00 0.00 2.39
7424 11001 2.772077 TAAACTGCCCAATAGACGCA 57.228 45.000 0.00 0.00 0.00 5.24
7425 11002 3.003378 GGAATAAACTGCCCAATAGACGC 59.997 47.826 0.00 0.00 0.00 5.19
7426 11003 4.196193 TGGAATAAACTGCCCAATAGACG 58.804 43.478 0.00 0.00 0.00 4.18
7427 11004 5.594317 ACATGGAATAAACTGCCCAATAGAC 59.406 40.000 0.00 0.00 31.77 2.59
7428 11005 5.765510 ACATGGAATAAACTGCCCAATAGA 58.234 37.500 0.00 0.00 31.77 1.98
7429 11006 5.593909 TGACATGGAATAAACTGCCCAATAG 59.406 40.000 0.00 0.00 31.77 1.73
7430 11007 5.359576 GTGACATGGAATAAACTGCCCAATA 59.640 40.000 0.00 0.00 31.77 1.90
7431 11008 4.160252 GTGACATGGAATAAACTGCCCAAT 59.840 41.667 0.00 0.00 31.77 3.16
7432 11009 3.509575 GTGACATGGAATAAACTGCCCAA 59.490 43.478 0.00 0.00 31.77 4.12
7434 11011 2.097466 CGTGACATGGAATAAACTGCCC 59.903 50.000 0.00 0.00 0.00 5.36
7435 11012 2.097466 CCGTGACATGGAATAAACTGCC 59.903 50.000 8.08 0.00 0.00 4.85
7436 11013 3.405170 CCGTGACATGGAATAAACTGC 57.595 47.619 8.08 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.