Multiple sequence alignment - TraesCS6D01G019400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G019400 chr6D 100.000 2434 0 0 1 2434 7866712 7869145 0.000000e+00 4495.0
1 TraesCS6D01G019400 chr6D 88.522 1089 84 14 650 1702 7748163 7747080 0.000000e+00 1280.0
2 TraesCS6D01G019400 chr6D 94.000 50 3 0 1970 2019 7868641 7868690 2.600000e-10 76.8
3 TraesCS6D01G019400 chr6D 94.000 50 3 0 1930 1979 7868681 7868730 2.600000e-10 76.8
4 TraesCS6D01G019400 chr6D 83.333 78 12 1 33 109 451154548 451154625 1.210000e-08 71.3
5 TraesCS6D01G019400 chr6B 91.880 1527 78 25 489 1982 14412154 14410641 0.000000e+00 2091.0
6 TraesCS6D01G019400 chr6B 87.338 1082 96 19 650 1702 14461986 14460917 0.000000e+00 1201.0
7 TraesCS6D01G019400 chr6B 88.180 423 19 11 1980 2371 14410683 14410261 2.190000e-130 475.0
8 TraesCS6D01G019400 chr6B 83.196 363 49 7 1279 1630 14456647 14456286 3.020000e-84 322.0
9 TraesCS6D01G019400 chr6A 91.701 964 35 14 1038 1979 8165695 8166635 0.000000e+00 1295.0
10 TraesCS6D01G019400 chr6A 87.948 1087 92 14 650 1702 8011153 8010072 0.000000e+00 1245.0
11 TraesCS6D01G019400 chr6A 94.776 402 19 1 431 830 8149212 8149613 2.050000e-175 625.0
12 TraesCS6D01G019400 chr6A 88.503 374 29 10 1970 2340 8166586 8166948 7.990000e-120 440.0
13 TraesCS6D01G019400 chr6A 90.708 226 20 1 826 1051 8163946 8164170 1.410000e-77 300.0
14 TraesCS6D01G019400 chr6A 80.214 187 35 2 33 218 596888119 596888304 3.260000e-29 139.0
15 TraesCS6D01G019400 chr6A 98.438 64 1 0 2371 2434 8166949 8167012 1.980000e-21 113.0
16 TraesCS6D01G019400 chr3D 76.923 299 59 5 8 303 587423521 587423812 6.960000e-36 161.0
17 TraesCS6D01G019400 chr2A 81.699 153 27 1 1827 1979 99146580 99146731 2.540000e-25 126.0
18 TraesCS6D01G019400 chr3B 78.974 195 27 6 17 210 779621937 779622118 1.180000e-23 121.0
19 TraesCS6D01G019400 chr4B 77.340 203 39 4 53 248 494690187 494689985 1.980000e-21 113.0
20 TraesCS6D01G019400 chr4A 78.453 181 33 5 1801 1979 534162827 534163003 1.980000e-21 113.0
21 TraesCS6D01G019400 chr7D 75.824 182 36 5 53 226 519274259 519274078 4.310000e-13 86.1
22 TraesCS6D01G019400 chr3A 73.778 225 46 10 22 239 624442752 624442970 2.600000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G019400 chr6D 7866712 7869145 2433 False 1549.533333 4495 96.0000 1 2434 3 chr6D.!!$F2 2433
1 TraesCS6D01G019400 chr6D 7747080 7748163 1083 True 1280.000000 1280 88.5220 650 1702 1 chr6D.!!$R1 1052
2 TraesCS6D01G019400 chr6B 14410261 14412154 1893 True 1283.000000 2091 90.0300 489 2371 2 chr6B.!!$R3 1882
3 TraesCS6D01G019400 chr6B 14460917 14461986 1069 True 1201.000000 1201 87.3380 650 1702 1 chr6B.!!$R2 1052
4 TraesCS6D01G019400 chr6A 8010072 8011153 1081 True 1245.000000 1245 87.9480 650 1702 1 chr6A.!!$R1 1052
5 TraesCS6D01G019400 chr6A 8163946 8167012 3066 False 537.000000 1295 92.3375 826 2434 4 chr6A.!!$F3 1608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 470 0.032403 TTTCTGCCATGTGCTTGCAC 59.968 50.0 17.73 17.73 42.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1956 3565 0.105039 GGTCAACCCAGCTCCGATAG 59.895 60.0 0.0 0.0 0.0 2.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.247648 TAACCCGACCCGGCCAAA 61.248 61.111 2.24 0.00 46.86 3.28
18 19 2.827129 TAACCCGACCCGGCCAAAA 61.827 57.895 2.24 0.00 46.86 2.44
19 20 2.349100 TAACCCGACCCGGCCAAAAA 62.349 55.000 2.24 0.00 46.86 1.94
33 34 4.494515 AAAAAGCCTGACCCGACC 57.505 55.556 0.00 0.00 0.00 4.79
34 35 1.228459 AAAAAGCCTGACCCGACCC 60.228 57.895 0.00 0.00 0.00 4.46
35 36 3.546714 AAAAGCCTGACCCGACCCG 62.547 63.158 0.00 0.00 0.00 5.28
40 41 3.760035 CTGACCCGACCCGACCTG 61.760 72.222 0.00 0.00 0.00 4.00
48 49 4.125239 ACCCGACCTGGTCTTACC 57.875 61.111 23.49 0.00 39.22 2.85
49 50 1.468340 ACCCGACCTGGTCTTACCT 59.532 57.895 23.49 0.00 39.58 3.08
50 51 0.706433 ACCCGACCTGGTCTTACCTA 59.294 55.000 23.49 0.00 39.58 3.08
51 52 1.290130 ACCCGACCTGGTCTTACCTAT 59.710 52.381 23.49 0.67 39.58 2.57
52 53 1.687123 CCCGACCTGGTCTTACCTATG 59.313 57.143 23.49 6.23 39.58 2.23
53 54 1.687123 CCGACCTGGTCTTACCTATGG 59.313 57.143 23.49 11.37 39.58 2.74
54 55 1.687123 CGACCTGGTCTTACCTATGGG 59.313 57.143 23.49 0.00 39.58 4.00
55 56 1.416772 GACCTGGTCTTACCTATGGGC 59.583 57.143 19.53 0.00 39.58 5.36
56 57 0.765510 CCTGGTCTTACCTATGGGCC 59.234 60.000 0.00 0.00 39.58 5.80
57 58 0.393077 CTGGTCTTACCTATGGGCCG 59.607 60.000 0.00 0.00 39.58 6.13
58 59 1.052124 TGGTCTTACCTATGGGCCGG 61.052 60.000 0.00 0.00 39.58 6.13
59 60 1.752833 GTCTTACCTATGGGCCGGG 59.247 63.158 2.18 3.53 35.63 5.73
60 61 2.144738 TCTTACCTATGGGCCGGGC 61.145 63.158 22.00 22.00 35.63 6.13
79 80 2.333688 CCTAGGCCTAGGTTTTGAGC 57.666 55.000 40.59 0.00 45.93 4.26
80 81 1.134068 CCTAGGCCTAGGTTTTGAGCC 60.134 57.143 40.59 3.03 45.93 4.70
81 82 0.916809 TAGGCCTAGGTTTTGAGCCC 59.083 55.000 8.91 0.00 45.00 5.19
82 83 1.749258 GGCCTAGGTTTTGAGCCCG 60.749 63.158 11.31 0.00 37.66 6.13
83 84 1.298667 GCCTAGGTTTTGAGCCCGA 59.701 57.895 11.31 0.00 0.00 5.14
84 85 0.322187 GCCTAGGTTTTGAGCCCGAA 60.322 55.000 11.31 0.00 0.00 4.30
85 86 1.739067 CCTAGGTTTTGAGCCCGAAG 58.261 55.000 0.00 0.00 0.00 3.79
118 119 2.199535 GCCTGGGCCTGCCATATT 59.800 61.111 10.86 0.00 37.98 1.28
119 120 1.458209 GCCTGGGCCTGCCATATTT 60.458 57.895 10.86 0.00 37.98 1.40
120 121 1.751349 GCCTGGGCCTGCCATATTTG 61.751 60.000 10.86 0.00 37.98 2.32
121 122 0.397535 CCTGGGCCTGCCATATTTGT 60.398 55.000 10.86 0.00 37.98 2.83
122 123 1.035139 CTGGGCCTGCCATATTTGTC 58.965 55.000 10.86 0.00 37.98 3.18
123 124 0.334335 TGGGCCTGCCATATTTGTCA 59.666 50.000 10.86 0.00 37.98 3.58
124 125 1.063038 TGGGCCTGCCATATTTGTCAT 60.063 47.619 10.86 0.00 37.98 3.06
125 126 2.041701 GGGCCTGCCATATTTGTCATT 58.958 47.619 10.86 0.00 37.98 2.57
126 127 2.435437 GGGCCTGCCATATTTGTCATTT 59.565 45.455 10.86 0.00 37.98 2.32
127 128 3.118298 GGGCCTGCCATATTTGTCATTTT 60.118 43.478 10.86 0.00 37.98 1.82
128 129 3.872771 GGCCTGCCATATTTGTCATTTTG 59.127 43.478 2.58 0.00 35.81 2.44
129 130 3.310501 GCCTGCCATATTTGTCATTTTGC 59.689 43.478 0.00 0.00 0.00 3.68
130 131 3.552699 CCTGCCATATTTGTCATTTTGCG 59.447 43.478 0.00 0.00 0.00 4.85
131 132 4.422840 CTGCCATATTTGTCATTTTGCGA 58.577 39.130 0.00 0.00 0.00 5.10
132 133 4.814147 TGCCATATTTGTCATTTTGCGAA 58.186 34.783 0.00 0.00 0.00 4.70
133 134 4.863689 TGCCATATTTGTCATTTTGCGAAG 59.136 37.500 0.00 0.00 0.00 3.79
134 135 5.101628 GCCATATTTGTCATTTTGCGAAGA 58.898 37.500 0.00 0.00 0.00 2.87
135 136 5.230726 GCCATATTTGTCATTTTGCGAAGAG 59.769 40.000 0.00 0.00 0.00 2.85
136 137 6.324819 CCATATTTGTCATTTTGCGAAGAGT 58.675 36.000 0.00 0.00 0.00 3.24
137 138 6.470235 CCATATTTGTCATTTTGCGAAGAGTC 59.530 38.462 0.00 0.00 0.00 3.36
138 139 3.896648 TTGTCATTTTGCGAAGAGTCC 57.103 42.857 0.00 0.00 0.00 3.85
139 140 2.151202 TGTCATTTTGCGAAGAGTCCC 58.849 47.619 0.00 0.00 0.00 4.46
140 141 2.151202 GTCATTTTGCGAAGAGTCCCA 58.849 47.619 0.00 0.00 0.00 4.37
141 142 2.160417 GTCATTTTGCGAAGAGTCCCAG 59.840 50.000 0.00 0.00 0.00 4.45
142 143 1.135575 CATTTTGCGAAGAGTCCCAGC 60.136 52.381 0.00 0.00 0.00 4.85
143 144 0.889186 TTTTGCGAAGAGTCCCAGCC 60.889 55.000 0.00 0.00 0.00 4.85
144 145 2.748058 TTTGCGAAGAGTCCCAGCCC 62.748 60.000 0.00 0.00 0.00 5.19
145 146 3.706373 GCGAAGAGTCCCAGCCCA 61.706 66.667 0.00 0.00 0.00 5.36
146 147 3.068881 CGAAGAGTCCCAGCCCAA 58.931 61.111 0.00 0.00 0.00 4.12
147 148 1.078848 CGAAGAGTCCCAGCCCAAG 60.079 63.158 0.00 0.00 0.00 3.61
148 149 1.301293 GAAGAGTCCCAGCCCAAGG 59.699 63.158 0.00 0.00 0.00 3.61
181 182 4.431131 CACTGATGGGCCGGGCTT 62.431 66.667 28.80 15.95 0.00 4.35
182 183 2.690881 ACTGATGGGCCGGGCTTA 60.691 61.111 28.80 17.64 0.00 3.09
183 184 2.111878 CTGATGGGCCGGGCTTAG 59.888 66.667 28.80 16.14 0.00 2.18
184 185 3.482232 CTGATGGGCCGGGCTTAGG 62.482 68.421 28.80 10.71 0.00 2.69
204 205 2.175878 CCTGAATTCTAGGCCCGATG 57.824 55.000 7.05 0.00 0.00 3.84
205 206 1.271054 CCTGAATTCTAGGCCCGATGG 60.271 57.143 7.05 0.00 0.00 3.51
226 227 4.344865 GGTCAGGCCGGGCTTGAA 62.345 66.667 32.03 14.35 45.60 2.69
227 228 3.056328 GTCAGGCCGGGCTTGAAC 61.056 66.667 32.03 22.03 45.60 3.18
228 229 4.344865 TCAGGCCGGGCTTGAACC 62.345 66.667 29.02 5.72 41.48 3.62
229 230 4.351054 CAGGCCGGGCTTGAACCT 62.351 66.667 30.73 8.48 37.87 3.50
230 231 2.609610 AGGCCGGGCTTGAACCTA 60.610 61.111 27.45 0.00 0.00 3.08
231 232 2.124695 GGCCGGGCTTGAACCTAG 60.125 66.667 22.87 0.00 0.00 3.02
232 233 2.124695 GCCGGGCTTGAACCTAGG 60.125 66.667 12.87 7.41 0.00 3.02
233 234 2.967946 GCCGGGCTTGAACCTAGGT 61.968 63.158 9.21 9.21 32.45 3.08
234 235 1.683441 CCGGGCTTGAACCTAGGTT 59.317 57.895 27.43 27.43 41.54 3.50
235 236 0.037734 CCGGGCTTGAACCTAGGTTT 59.962 55.000 27.72 12.12 38.60 3.27
236 237 1.546998 CCGGGCTTGAACCTAGGTTTT 60.547 52.381 27.72 7.28 38.60 2.43
237 238 1.810755 CGGGCTTGAACCTAGGTTTTC 59.189 52.381 27.72 16.89 38.60 2.29
238 239 2.552373 CGGGCTTGAACCTAGGTTTTCT 60.552 50.000 27.72 6.01 38.60 2.52
239 240 2.820197 GGGCTTGAACCTAGGTTTTCTG 59.180 50.000 27.72 17.97 38.60 3.02
240 241 2.229062 GGCTTGAACCTAGGTTTTCTGC 59.771 50.000 27.72 24.82 38.60 4.26
241 242 3.149981 GCTTGAACCTAGGTTTTCTGCT 58.850 45.455 27.72 3.91 38.60 4.24
242 243 3.570125 GCTTGAACCTAGGTTTTCTGCTT 59.430 43.478 27.72 3.07 38.60 3.91
243 244 4.320567 GCTTGAACCTAGGTTTTCTGCTTC 60.321 45.833 27.72 13.25 38.60 3.86
244 245 3.399330 TGAACCTAGGTTTTCTGCTTCG 58.601 45.455 27.72 0.00 38.60 3.79
245 246 2.474410 ACCTAGGTTTTCTGCTTCGG 57.526 50.000 9.21 0.00 0.00 4.30
246 247 1.003233 ACCTAGGTTTTCTGCTTCGGG 59.997 52.381 9.21 0.00 0.00 5.14
247 248 1.087501 CTAGGTTTTCTGCTTCGGGC 58.912 55.000 0.00 0.00 42.22 6.13
248 249 0.672401 TAGGTTTTCTGCTTCGGGCG 60.672 55.000 0.00 0.00 45.43 6.13
265 266 4.410400 GGACCGGACCCAAGCCTG 62.410 72.222 9.46 0.00 0.00 4.85
266 267 4.410400 GACCGGACCCAAGCCTGG 62.410 72.222 9.46 0.00 43.10 4.45
303 304 3.314541 CCAACGGATGGCTAGGTATAC 57.685 52.381 0.00 0.00 43.80 1.47
304 305 2.028385 CCAACGGATGGCTAGGTATACC 60.028 54.545 14.54 14.54 43.80 2.73
305 306 1.542492 ACGGATGGCTAGGTATACCG 58.458 55.000 16.31 4.37 43.61 4.02
306 307 1.202976 ACGGATGGCTAGGTATACCGT 60.203 52.381 16.31 0.00 45.51 4.83
307 308 1.201647 CGGATGGCTAGGTATACCGTG 59.798 57.143 16.31 13.47 42.08 4.94
308 309 1.549170 GGATGGCTAGGTATACCGTGG 59.451 57.143 16.31 11.08 42.08 4.94
309 310 2.522185 GATGGCTAGGTATACCGTGGA 58.478 52.381 16.31 2.81 42.08 4.02
310 311 1.696063 TGGCTAGGTATACCGTGGAC 58.304 55.000 16.31 12.50 42.08 4.02
311 312 1.216175 TGGCTAGGTATACCGTGGACT 59.784 52.381 16.31 0.20 42.08 3.85
312 313 2.442878 TGGCTAGGTATACCGTGGACTA 59.557 50.000 16.31 1.45 42.08 2.59
313 314 2.816672 GGCTAGGTATACCGTGGACTAC 59.183 54.545 16.31 1.89 42.08 2.73
314 315 3.497584 GGCTAGGTATACCGTGGACTACT 60.498 52.174 16.31 0.00 42.08 2.57
315 316 4.140536 GCTAGGTATACCGTGGACTACTT 58.859 47.826 16.31 0.00 42.08 2.24
316 317 4.023365 GCTAGGTATACCGTGGACTACTTG 60.023 50.000 16.31 0.00 42.08 3.16
317 318 4.240881 AGGTATACCGTGGACTACTTGA 57.759 45.455 16.31 0.00 42.08 3.02
318 319 4.801164 AGGTATACCGTGGACTACTTGAT 58.199 43.478 16.31 0.00 42.08 2.57
319 320 4.583489 AGGTATACCGTGGACTACTTGATG 59.417 45.833 16.31 0.00 42.08 3.07
320 321 2.953466 TACCGTGGACTACTTGATGC 57.047 50.000 0.00 0.00 0.00 3.91
321 322 1.267121 ACCGTGGACTACTTGATGCT 58.733 50.000 0.00 0.00 0.00 3.79
322 323 1.204941 ACCGTGGACTACTTGATGCTC 59.795 52.381 0.00 0.00 0.00 4.26
323 324 1.204704 CCGTGGACTACTTGATGCTCA 59.795 52.381 0.00 0.00 0.00 4.26
324 325 2.353704 CCGTGGACTACTTGATGCTCAA 60.354 50.000 0.00 0.00 34.79 3.02
325 326 3.325870 CGTGGACTACTTGATGCTCAAA 58.674 45.455 1.25 0.00 35.73 2.69
326 327 3.935203 CGTGGACTACTTGATGCTCAAAT 59.065 43.478 1.25 0.00 35.73 2.32
327 328 4.201753 CGTGGACTACTTGATGCTCAAATG 60.202 45.833 1.25 0.00 35.73 2.32
328 329 4.095483 GTGGACTACTTGATGCTCAAATGG 59.905 45.833 1.25 0.00 35.73 3.16
329 330 4.019411 TGGACTACTTGATGCTCAAATGGA 60.019 41.667 1.25 0.00 35.73 3.41
330 331 4.574013 GGACTACTTGATGCTCAAATGGAG 59.426 45.833 1.25 0.00 46.93 3.86
338 339 2.816746 CTCAAATGGAGCCCATGGG 58.183 57.895 27.87 27.87 44.40 4.00
348 349 4.972875 CCCATGGGCAAGTCTCTC 57.027 61.111 20.41 0.00 0.00 3.20
349 350 1.153289 CCCATGGGCAAGTCTCTCG 60.153 63.158 20.41 0.00 0.00 4.04
350 351 1.817099 CCATGGGCAAGTCTCTCGC 60.817 63.158 2.85 0.00 0.00 5.03
351 352 1.078918 CATGGGCAAGTCTCTCGCA 60.079 57.895 0.00 0.00 0.00 5.10
352 353 0.463295 CATGGGCAAGTCTCTCGCAT 60.463 55.000 0.00 0.00 34.36 4.73
353 354 0.463295 ATGGGCAAGTCTCTCGCATG 60.463 55.000 0.00 0.00 33.10 4.06
354 355 1.078848 GGGCAAGTCTCTCGCATGT 60.079 57.895 0.00 0.00 0.00 3.21
355 356 0.175760 GGGCAAGTCTCTCGCATGTA 59.824 55.000 0.00 0.00 0.00 2.29
356 357 1.281899 GGCAAGTCTCTCGCATGTAC 58.718 55.000 0.00 0.00 0.00 2.90
357 358 1.134965 GGCAAGTCTCTCGCATGTACT 60.135 52.381 0.00 0.00 0.00 2.73
358 359 2.099263 GGCAAGTCTCTCGCATGTACTA 59.901 50.000 0.00 0.00 0.00 1.82
359 360 3.367607 GCAAGTCTCTCGCATGTACTAG 58.632 50.000 0.00 0.00 0.00 2.57
360 361 3.181495 GCAAGTCTCTCGCATGTACTAGT 60.181 47.826 0.00 0.00 0.00 2.57
361 362 4.346970 CAAGTCTCTCGCATGTACTAGTG 58.653 47.826 5.39 0.00 0.00 2.74
362 363 2.946329 AGTCTCTCGCATGTACTAGTGG 59.054 50.000 5.39 0.00 0.00 4.00
363 364 2.033550 GTCTCTCGCATGTACTAGTGGG 59.966 54.545 5.39 0.00 0.00 4.61
364 365 0.744874 TCTCGCATGTACTAGTGGGC 59.255 55.000 5.39 2.85 0.00 5.36
365 366 0.747255 CTCGCATGTACTAGTGGGCT 59.253 55.000 5.39 0.00 0.00 5.19
366 367 0.459899 TCGCATGTACTAGTGGGCTG 59.540 55.000 5.39 0.00 0.00 4.85
367 368 0.530650 CGCATGTACTAGTGGGCTGG 60.531 60.000 5.39 0.00 0.00 4.85
368 369 0.179045 GCATGTACTAGTGGGCTGGG 60.179 60.000 5.39 0.00 0.00 4.45
369 370 0.179045 CATGTACTAGTGGGCTGGGC 60.179 60.000 5.39 0.00 0.00 5.36
370 371 0.326618 ATGTACTAGTGGGCTGGGCT 60.327 55.000 5.39 0.00 0.00 5.19
371 372 0.546747 TGTACTAGTGGGCTGGGCTT 60.547 55.000 5.39 0.00 0.00 4.35
372 373 0.618981 GTACTAGTGGGCTGGGCTTT 59.381 55.000 5.39 0.00 0.00 3.51
373 374 1.004394 GTACTAGTGGGCTGGGCTTTT 59.996 52.381 5.39 0.00 0.00 2.27
374 375 0.038310 ACTAGTGGGCTGGGCTTTTC 59.962 55.000 0.00 0.00 0.00 2.29
375 376 0.329596 CTAGTGGGCTGGGCTTTTCT 59.670 55.000 0.00 0.00 0.00 2.52
376 377 0.777446 TAGTGGGCTGGGCTTTTCTT 59.223 50.000 0.00 0.00 0.00 2.52
377 378 0.105504 AGTGGGCTGGGCTTTTCTTT 60.106 50.000 0.00 0.00 0.00 2.52
378 379 0.758734 GTGGGCTGGGCTTTTCTTTT 59.241 50.000 0.00 0.00 0.00 2.27
379 380 0.758123 TGGGCTGGGCTTTTCTTTTG 59.242 50.000 0.00 0.00 0.00 2.44
380 381 0.603707 GGGCTGGGCTTTTCTTTTGC 60.604 55.000 0.00 0.00 0.00 3.68
381 382 0.945743 GGCTGGGCTTTTCTTTTGCG 60.946 55.000 0.00 0.00 0.00 4.85
382 383 0.249447 GCTGGGCTTTTCTTTTGCGT 60.249 50.000 0.00 0.00 0.00 5.24
383 384 1.490621 CTGGGCTTTTCTTTTGCGTG 58.509 50.000 0.00 0.00 0.00 5.34
384 385 1.066908 CTGGGCTTTTCTTTTGCGTGA 59.933 47.619 0.00 0.00 0.00 4.35
385 386 1.478510 TGGGCTTTTCTTTTGCGTGAA 59.521 42.857 0.00 0.00 0.00 3.18
386 387 2.093973 TGGGCTTTTCTTTTGCGTGAAA 60.094 40.909 0.00 0.00 0.00 2.69
387 388 2.539688 GGGCTTTTCTTTTGCGTGAAAG 59.460 45.455 6.38 6.38 37.85 2.62
388 389 2.539688 GGCTTTTCTTTTGCGTGAAAGG 59.460 45.455 11.11 0.00 37.27 3.11
389 390 2.539688 GCTTTTCTTTTGCGTGAAAGGG 59.460 45.455 11.11 0.00 37.27 3.95
390 391 3.736740 GCTTTTCTTTTGCGTGAAAGGGA 60.737 43.478 11.11 1.35 37.27 4.20
391 392 3.430333 TTTCTTTTGCGTGAAAGGGAC 57.570 42.857 11.11 0.00 37.27 4.46
392 393 1.314730 TCTTTTGCGTGAAAGGGACC 58.685 50.000 11.11 0.00 37.27 4.46
393 394 0.040425 CTTTTGCGTGAAAGGGACCG 60.040 55.000 5.17 0.00 33.90 4.79
394 395 1.448922 TTTTGCGTGAAAGGGACCGG 61.449 55.000 0.00 0.00 0.00 5.28
395 396 2.326773 TTTGCGTGAAAGGGACCGGA 62.327 55.000 9.46 0.00 0.00 5.14
396 397 2.119484 TTGCGTGAAAGGGACCGGAT 62.119 55.000 9.46 0.00 0.00 4.18
397 398 1.376812 GCGTGAAAGGGACCGGATT 60.377 57.895 9.46 0.00 0.00 3.01
398 399 1.644786 GCGTGAAAGGGACCGGATTG 61.645 60.000 9.46 0.00 0.00 2.67
399 400 1.644786 CGTGAAAGGGACCGGATTGC 61.645 60.000 9.46 0.00 0.00 3.56
400 401 1.001393 TGAAAGGGACCGGATTGCC 60.001 57.895 9.46 0.00 0.00 4.52
401 402 1.753078 GAAAGGGACCGGATTGCCC 60.753 63.158 9.46 13.49 42.37 5.36
404 405 2.829592 GGGACCGGATTGCCCTAG 59.170 66.667 9.46 0.00 38.85 3.02
405 406 2.819284 GGGACCGGATTGCCCTAGG 61.819 68.421 9.46 0.06 38.85 3.02
406 407 2.070650 GGACCGGATTGCCCTAGGT 61.071 63.158 9.46 0.00 38.00 3.08
407 408 1.632965 GGACCGGATTGCCCTAGGTT 61.633 60.000 9.46 0.00 35.00 3.50
408 409 0.255033 GACCGGATTGCCCTAGGTTT 59.745 55.000 9.46 0.00 35.00 3.27
409 410 1.487558 GACCGGATTGCCCTAGGTTTA 59.512 52.381 9.46 0.00 35.00 2.01
410 411 1.917568 ACCGGATTGCCCTAGGTTTAA 59.082 47.619 9.46 0.00 0.00 1.52
411 412 2.092592 ACCGGATTGCCCTAGGTTTAAG 60.093 50.000 9.46 0.00 0.00 1.85
412 413 2.092592 CCGGATTGCCCTAGGTTTAAGT 60.093 50.000 8.29 0.00 0.00 2.24
413 414 3.617284 CGGATTGCCCTAGGTTTAAGTT 58.383 45.455 8.29 0.00 0.00 2.66
414 415 4.384427 CCGGATTGCCCTAGGTTTAAGTTA 60.384 45.833 8.29 0.00 0.00 2.24
415 416 5.374071 CGGATTGCCCTAGGTTTAAGTTAT 58.626 41.667 8.29 0.00 0.00 1.89
416 417 5.826208 CGGATTGCCCTAGGTTTAAGTTATT 59.174 40.000 8.29 0.00 0.00 1.40
417 418 6.320418 CGGATTGCCCTAGGTTTAAGTTATTT 59.680 38.462 8.29 0.00 0.00 1.40
418 419 7.147966 CGGATTGCCCTAGGTTTAAGTTATTTT 60.148 37.037 8.29 0.00 0.00 1.82
419 420 8.537016 GGATTGCCCTAGGTTTAAGTTATTTTT 58.463 33.333 8.29 0.00 0.00 1.94
441 442 6.788598 TTTTTCGGGTAGGGTTTAAGTTTT 57.211 33.333 0.00 0.00 0.00 2.43
442 443 6.788598 TTTTCGGGTAGGGTTTAAGTTTTT 57.211 33.333 0.00 0.00 0.00 1.94
467 468 1.868469 TTTTTCTGCCATGTGCTTGC 58.132 45.000 7.54 0.00 42.00 4.01
468 469 0.751452 TTTTCTGCCATGTGCTTGCA 59.249 45.000 7.54 1.18 42.00 4.08
469 470 0.032403 TTTCTGCCATGTGCTTGCAC 59.968 50.000 17.73 17.73 42.00 4.57
470 471 0.824595 TTCTGCCATGTGCTTGCACT 60.825 50.000 23.53 9.06 42.00 4.40
471 472 0.824595 TCTGCCATGTGCTTGCACTT 60.825 50.000 23.53 16.05 42.00 3.16
472 473 0.883153 CTGCCATGTGCTTGCACTTA 59.117 50.000 23.53 7.65 42.00 2.24
473 474 1.270274 CTGCCATGTGCTTGCACTTAA 59.730 47.619 23.53 6.96 42.00 1.85
474 475 1.000385 TGCCATGTGCTTGCACTTAAC 60.000 47.619 23.53 13.92 42.00 2.01
475 476 1.270550 GCCATGTGCTTGCACTTAACT 59.729 47.619 23.53 4.05 36.87 2.24
476 477 2.487762 GCCATGTGCTTGCACTTAACTA 59.512 45.455 23.53 5.60 36.87 2.24
477 478 3.426695 GCCATGTGCTTGCACTTAACTAG 60.427 47.826 23.53 7.78 36.87 2.57
478 479 4.002982 CCATGTGCTTGCACTTAACTAGA 58.997 43.478 23.53 4.26 0.00 2.43
479 480 4.093998 CCATGTGCTTGCACTTAACTAGAG 59.906 45.833 23.53 6.60 0.00 2.43
480 481 4.336889 TGTGCTTGCACTTAACTAGAGT 57.663 40.909 23.53 0.00 0.00 3.24
481 482 4.058124 TGTGCTTGCACTTAACTAGAGTG 58.942 43.478 23.53 0.67 45.64 3.51
482 483 4.202212 TGTGCTTGCACTTAACTAGAGTGA 60.202 41.667 23.53 0.00 45.72 3.41
483 484 4.150804 GTGCTTGCACTTAACTAGAGTGAC 59.849 45.833 17.36 6.08 45.72 3.67
484 485 4.039245 TGCTTGCACTTAACTAGAGTGACT 59.961 41.667 12.90 0.00 45.72 3.41
485 486 5.243060 TGCTTGCACTTAACTAGAGTGACTA 59.757 40.000 12.90 2.86 45.72 2.59
506 507 1.491563 CTCGAAAGCGGACGTTTGG 59.508 57.895 0.00 0.00 38.28 3.28
515 516 2.342648 GACGTTTGGCTCTCGGGT 59.657 61.111 0.00 0.00 0.00 5.28
519 520 0.108329 CGTTTGGCTCTCGGGTGTAT 60.108 55.000 0.00 0.00 0.00 2.29
525 526 1.605712 GGCTCTCGGGTGTATATGCAC 60.606 57.143 14.90 14.90 38.56 4.57
541 542 7.768582 TGTATATGCACCGGATATAGGAAATTG 59.231 37.037 9.46 0.00 0.00 2.32
647 649 6.524101 AAATGTTAGGATACCGTTTTGCAT 57.476 33.333 0.00 0.00 37.17 3.96
737 754 3.245229 TGCCAAGAAAAGGAGGATGCTAA 60.245 43.478 0.00 0.00 33.13 3.09
852 871 4.082787 ACATTAAGTCCTGCCAAAACATCG 60.083 41.667 0.00 0.00 0.00 3.84
867 888 1.000506 ACATCGGGCGTATATCCACAC 59.999 52.381 0.00 0.00 0.00 3.82
894 915 6.559810 TGATACATTAATTCAACGCCAAAGG 58.440 36.000 0.00 0.00 0.00 3.11
1009 1031 0.322816 TCTCTTTGTCATGGCAGCCC 60.323 55.000 9.64 0.00 0.00 5.19
1168 2731 2.281517 GTCCTCTCGAGTCTTGATCGA 58.718 52.381 13.13 0.00 46.26 3.59
1193 2756 9.690434 GATTACTTTCATTCGTATTCAAGTCAC 57.310 33.333 0.40 0.00 0.00 3.67
1209 2772 3.886123 AGTCACTGCACCTGTTTAGTTT 58.114 40.909 0.00 0.00 0.00 2.66
1233 2796 4.155280 ACCAAAATCGTCACTATTTTCCCG 59.845 41.667 0.00 0.00 35.00 5.14
1234 2797 4.155280 CCAAAATCGTCACTATTTTCCCGT 59.845 41.667 0.00 0.00 35.00 5.28
1235 2798 5.352016 CCAAAATCGTCACTATTTTCCCGTA 59.648 40.000 0.00 0.00 35.00 4.02
1236 2799 6.245724 CAAAATCGTCACTATTTTCCCGTAC 58.754 40.000 0.00 0.00 35.00 3.67
1237 2800 4.724074 ATCGTCACTATTTTCCCGTACA 57.276 40.909 0.00 0.00 0.00 2.90
1238 2801 4.724074 TCGTCACTATTTTCCCGTACAT 57.276 40.909 0.00 0.00 0.00 2.29
1239 2802 4.426416 TCGTCACTATTTTCCCGTACATG 58.574 43.478 0.00 0.00 0.00 3.21
1445 3035 4.332543 TGTTGTGCCTAGAATTATGCTTCG 59.667 41.667 0.00 0.00 0.00 3.79
1490 3080 9.740239 ATTTCATCACATATGCTTACAAATGTC 57.260 29.630 1.58 0.00 30.32 3.06
1538 3128 3.038788 TGAGCTTCTTATGTTGTGCGA 57.961 42.857 0.00 0.00 0.00 5.10
1562 3152 6.142818 TCCACATTTGTTACTTTGGTCAAG 57.857 37.500 0.00 0.00 38.64 3.02
1712 3306 7.986320 TCCTTGTGTTTTGATGTCAATGAATTT 59.014 29.630 0.00 0.00 35.55 1.82
1720 3314 8.625786 TTTGATGTCAATGAATTTGAGAGAGA 57.374 30.769 0.00 0.00 44.89 3.10
1850 3459 5.488341 ACTATCAAAGTGCACCGAAAGTAT 58.512 37.500 14.63 1.20 36.93 2.12
1892 3501 9.849166 GAATAAAAATTACACCGAGATTCCAAA 57.151 29.630 0.00 0.00 0.00 3.28
1911 3520 1.036707 AACCACCGAACAACCATTGG 58.963 50.000 0.00 0.00 34.12 3.16
1912 3521 0.106419 ACCACCGAACAACCATTGGT 60.106 50.000 1.37 1.37 37.65 3.67
1946 3555 3.712881 GTTGACGTGCCCGCAGTC 61.713 66.667 0.00 10.47 37.70 3.51
1958 3567 3.075005 GCAGTCGCCACTCCCCTA 61.075 66.667 0.00 0.00 0.00 3.53
1959 3568 2.435693 GCAGTCGCCACTCCCCTAT 61.436 63.158 0.00 0.00 0.00 2.57
1960 3569 1.742768 CAGTCGCCACTCCCCTATC 59.257 63.158 0.00 0.00 0.00 2.08
1961 3570 1.828660 AGTCGCCACTCCCCTATCG 60.829 63.158 0.00 0.00 0.00 2.92
1962 3571 2.520982 TCGCCACTCCCCTATCGG 60.521 66.667 0.00 0.00 0.00 4.18
1963 3572 2.520982 CGCCACTCCCCTATCGGA 60.521 66.667 0.00 0.00 0.00 4.55
1968 3577 3.784573 CTCCCCTATCGGAGCTGG 58.215 66.667 0.00 0.00 43.01 4.85
1969 3578 1.910772 CTCCCCTATCGGAGCTGGG 60.911 68.421 0.00 0.00 43.01 4.45
1970 3579 2.122813 CCCCTATCGGAGCTGGGT 60.123 66.667 0.00 0.00 38.03 4.51
1971 3580 1.766461 CCCCTATCGGAGCTGGGTT 60.766 63.158 0.00 0.00 38.03 4.11
1972 3581 1.447643 CCCTATCGGAGCTGGGTTG 59.552 63.158 0.00 0.00 35.13 3.77
1973 3582 1.048724 CCCTATCGGAGCTGGGTTGA 61.049 60.000 0.00 0.00 35.13 3.18
1974 3583 0.105039 CCTATCGGAGCTGGGTTGAC 59.895 60.000 0.00 0.00 0.00 3.18
1975 3584 0.105039 CTATCGGAGCTGGGTTGACC 59.895 60.000 0.00 0.00 40.81 4.02
1976 3585 0.325296 TATCGGAGCTGGGTTGACCT 60.325 55.000 0.00 0.00 41.11 3.85
1977 3586 1.201429 ATCGGAGCTGGGTTGACCTT 61.201 55.000 0.00 0.00 41.11 3.50
1978 3587 1.672356 CGGAGCTGGGTTGACCTTG 60.672 63.158 0.00 0.00 41.11 3.61
1979 3588 1.973812 GGAGCTGGGTTGACCTTGC 60.974 63.158 0.00 5.18 41.11 4.01
1980 3589 1.973812 GAGCTGGGTTGACCTTGCC 60.974 63.158 0.00 0.00 41.11 4.52
1981 3590 3.365265 GCTGGGTTGACCTTGCCG 61.365 66.667 0.00 0.00 41.11 5.69
1982 3591 3.365265 CTGGGTTGACCTTGCCGC 61.365 66.667 0.00 0.00 41.11 6.53
1983 3592 4.196778 TGGGTTGACCTTGCCGCA 62.197 61.111 0.00 0.00 41.11 5.69
1984 3593 3.365265 GGGTTGACCTTGCCGCAG 61.365 66.667 0.00 0.00 35.85 5.18
1985 3594 2.594592 GGTTGACCTTGCCGCAGT 60.595 61.111 0.00 0.00 0.00 4.40
2098 3707 6.183360 ACAGATCAATTATTCTTCCTTGCACG 60.183 38.462 0.00 0.00 0.00 5.34
2110 3719 0.236711 CTTGCACGAAACAGGCTGAG 59.763 55.000 23.66 11.57 0.00 3.35
2156 3765 7.524717 AAGAATAATAATACACCATGGCACC 57.475 36.000 13.04 0.00 0.00 5.01
2173 3782 2.668279 GCACCCTGTTGCTAATTTCACG 60.668 50.000 0.00 0.00 39.59 4.35
2204 3813 6.912203 TTTTAATCCGCATAATCGACAGAA 57.088 33.333 0.00 0.00 0.00 3.02
2253 3862 1.630369 AGGCTGCCTCATGTTCAGTTA 59.370 47.619 17.22 0.00 0.00 2.24
2262 3871 7.791029 TGCCTCATGTTCAGTTACAGATTATA 58.209 34.615 0.00 0.00 0.00 0.98
2263 3872 8.264347 TGCCTCATGTTCAGTTACAGATTATAA 58.736 33.333 0.00 0.00 0.00 0.98
2368 4008 2.906354 CCCAAACTGAATCTACCCGAG 58.094 52.381 0.00 0.00 0.00 4.63
2376 4016 0.824759 AATCTACCCGAGTGTCCTGC 59.175 55.000 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.228459 GGGTCGGGTCAGGCTTTTT 60.228 57.895 0.00 0.00 0.00 1.94
17 18 2.434774 GGGTCGGGTCAGGCTTTT 59.565 61.111 0.00 0.00 0.00 2.27
18 19 4.016706 CGGGTCGGGTCAGGCTTT 62.017 66.667 0.00 0.00 0.00 3.51
23 24 3.760035 CAGGTCGGGTCGGGTCAG 61.760 72.222 0.00 0.00 0.00 3.51
31 32 0.706433 TAGGTAAGACCAGGTCGGGT 59.294 55.000 14.32 6.35 46.02 5.28
32 33 1.687123 CATAGGTAAGACCAGGTCGGG 59.313 57.143 14.32 0.00 41.95 5.14
33 34 1.687123 CCATAGGTAAGACCAGGTCGG 59.313 57.143 14.32 2.76 41.95 4.79
34 35 1.687123 CCCATAGGTAAGACCAGGTCG 59.313 57.143 14.32 0.00 41.95 4.79
35 36 1.416772 GCCCATAGGTAAGACCAGGTC 59.583 57.143 12.25 12.25 41.95 3.85
36 37 1.508256 GCCCATAGGTAAGACCAGGT 58.492 55.000 0.00 0.00 41.95 4.00
37 38 0.765510 GGCCCATAGGTAAGACCAGG 59.234 60.000 0.00 0.00 41.95 4.45
38 39 0.393077 CGGCCCATAGGTAAGACCAG 59.607 60.000 0.00 0.00 41.95 4.00
39 40 1.052124 CCGGCCCATAGGTAAGACCA 61.052 60.000 0.00 0.00 41.95 4.02
40 41 1.752833 CCGGCCCATAGGTAAGACC 59.247 63.158 0.00 0.00 38.99 3.85
41 42 1.752833 CCCGGCCCATAGGTAAGAC 59.247 63.158 0.00 0.00 34.57 3.01
42 43 2.144738 GCCCGGCCCATAGGTAAGA 61.145 63.158 0.00 0.00 34.57 2.10
43 44 2.430367 GCCCGGCCCATAGGTAAG 59.570 66.667 0.00 0.00 34.57 2.34
44 45 3.172825 GGCCCGGCCCATAGGTAA 61.173 66.667 18.83 0.00 44.06 2.85
61 62 2.333688 GGCTCAAAACCTAGGCCTAG 57.666 55.000 30.05 30.05 39.68 3.02
65 66 0.322187 TTCGGGCTCAAAACCTAGGC 60.322 55.000 9.30 0.00 37.55 3.93
66 67 1.679032 CCTTCGGGCTCAAAACCTAGG 60.679 57.143 7.41 7.41 0.00 3.02
67 68 1.003233 ACCTTCGGGCTCAAAACCTAG 59.997 52.381 0.00 0.00 39.10 3.02
68 69 1.002773 GACCTTCGGGCTCAAAACCTA 59.997 52.381 0.00 0.00 39.10 3.08
69 70 0.250770 GACCTTCGGGCTCAAAACCT 60.251 55.000 0.00 0.00 39.10 3.50
70 71 1.574702 CGACCTTCGGGCTCAAAACC 61.575 60.000 0.00 0.00 39.10 3.27
71 72 1.866925 CGACCTTCGGGCTCAAAAC 59.133 57.895 0.00 0.00 39.10 2.43
72 73 4.371975 CGACCTTCGGGCTCAAAA 57.628 55.556 0.00 0.00 39.10 2.44
105 106 3.205815 TGACAAATATGGCAGGCCC 57.794 52.632 8.02 0.00 40.56 5.80
111 112 5.101628 TCTTCGCAAAATGACAAATATGGC 58.898 37.500 0.00 0.00 34.00 4.40
112 113 6.324819 ACTCTTCGCAAAATGACAAATATGG 58.675 36.000 0.00 0.00 0.00 2.74
113 114 6.470235 GGACTCTTCGCAAAATGACAAATATG 59.530 38.462 0.00 0.00 0.00 1.78
114 115 6.404734 GGGACTCTTCGCAAAATGACAAATAT 60.405 38.462 0.00 0.00 34.78 1.28
115 116 5.106317 GGGACTCTTCGCAAAATGACAAATA 60.106 40.000 0.00 0.00 34.78 1.40
116 117 4.321230 GGGACTCTTCGCAAAATGACAAAT 60.321 41.667 0.00 0.00 34.78 2.32
117 118 3.004315 GGGACTCTTCGCAAAATGACAAA 59.996 43.478 0.00 0.00 34.78 2.83
118 119 2.552315 GGGACTCTTCGCAAAATGACAA 59.448 45.455 0.00 0.00 34.78 3.18
119 120 2.151202 GGGACTCTTCGCAAAATGACA 58.849 47.619 0.00 0.00 34.78 3.58
120 121 2.151202 TGGGACTCTTCGCAAAATGAC 58.849 47.619 0.00 0.00 41.49 3.06
121 122 2.426522 CTGGGACTCTTCGCAAAATGA 58.573 47.619 0.00 0.00 43.62 2.57
122 123 1.135575 GCTGGGACTCTTCGCAAAATG 60.136 52.381 0.00 0.00 43.62 2.32
123 124 1.168714 GCTGGGACTCTTCGCAAAAT 58.831 50.000 0.00 0.00 43.62 1.82
124 125 0.889186 GGCTGGGACTCTTCGCAAAA 60.889 55.000 0.00 0.00 43.62 2.44
125 126 1.302511 GGCTGGGACTCTTCGCAAA 60.303 57.895 0.00 0.00 43.62 3.68
126 127 2.347490 GGCTGGGACTCTTCGCAA 59.653 61.111 0.00 0.00 43.62 4.85
127 128 3.706373 GGGCTGGGACTCTTCGCA 61.706 66.667 0.00 0.00 42.15 5.10
128 129 3.254024 TTGGGCTGGGACTCTTCGC 62.254 63.158 0.00 0.00 35.23 4.70
129 130 1.078848 CTTGGGCTGGGACTCTTCG 60.079 63.158 0.00 0.00 0.00 3.79
130 131 1.301293 CCTTGGGCTGGGACTCTTC 59.699 63.158 0.00 0.00 0.00 2.87
131 132 2.911926 GCCTTGGGCTGGGACTCTT 61.912 63.158 0.80 0.00 46.69 2.85
132 133 3.334054 GCCTTGGGCTGGGACTCT 61.334 66.667 0.80 0.00 46.69 3.24
164 165 2.947938 CTAAGCCCGGCCCATCAGTG 62.948 65.000 5.55 0.00 0.00 3.66
165 166 2.690881 TAAGCCCGGCCCATCAGT 60.691 61.111 5.55 0.00 0.00 3.41
166 167 2.111878 CTAAGCCCGGCCCATCAG 59.888 66.667 5.55 0.00 0.00 2.90
167 168 3.488569 CCTAAGCCCGGCCCATCA 61.489 66.667 5.55 0.00 0.00 3.07
168 169 4.956932 GCCTAAGCCCGGCCCATC 62.957 72.222 5.55 0.00 41.73 3.51
185 186 1.271054 CCATCGGGCCTAGAATTCAGG 60.271 57.143 8.44 12.90 36.16 3.86
186 187 2.175878 CCATCGGGCCTAGAATTCAG 57.824 55.000 8.44 3.29 0.00 3.02
209 210 4.344865 TTCAAGCCCGGCCTGACC 62.345 66.667 10.41 0.00 28.03 4.02
210 211 3.056328 GTTCAAGCCCGGCCTGAC 61.056 66.667 10.41 2.97 28.03 3.51
211 212 4.344865 GGTTCAAGCCCGGCCTGA 62.345 66.667 6.62 6.62 0.00 3.86
212 213 2.876368 CTAGGTTCAAGCCCGGCCTG 62.876 65.000 5.55 3.16 0.00 4.85
213 214 2.609610 TAGGTTCAAGCCCGGCCT 60.610 61.111 5.55 0.00 0.00 5.19
214 215 2.124695 CTAGGTTCAAGCCCGGCC 60.125 66.667 5.55 0.00 0.00 6.13
215 216 2.124695 CCTAGGTTCAAGCCCGGC 60.125 66.667 0.00 0.00 0.00 6.13
216 217 0.037734 AAACCTAGGTTCAAGCCCGG 59.962 55.000 27.24 0.00 37.35 5.73
217 218 1.810755 GAAAACCTAGGTTCAAGCCCG 59.189 52.381 27.24 0.00 37.35 6.13
218 219 2.820197 CAGAAAACCTAGGTTCAAGCCC 59.180 50.000 27.24 12.36 37.35 5.19
219 220 2.229062 GCAGAAAACCTAGGTTCAAGCC 59.771 50.000 27.24 13.95 37.35 4.35
220 221 3.149981 AGCAGAAAACCTAGGTTCAAGC 58.850 45.455 27.24 24.77 37.35 4.01
221 222 4.083802 CGAAGCAGAAAACCTAGGTTCAAG 60.084 45.833 27.24 17.40 38.12 3.02
222 223 3.813166 CGAAGCAGAAAACCTAGGTTCAA 59.187 43.478 27.24 0.00 38.12 2.69
223 224 3.399330 CGAAGCAGAAAACCTAGGTTCA 58.601 45.455 27.24 0.00 38.12 3.18
224 225 2.742589 CCGAAGCAGAAAACCTAGGTTC 59.257 50.000 27.24 16.14 37.35 3.62
225 226 2.552373 CCCGAAGCAGAAAACCTAGGTT 60.552 50.000 21.96 21.96 40.45 3.50
226 227 1.003233 CCCGAAGCAGAAAACCTAGGT 59.997 52.381 9.21 9.21 0.00 3.08
227 228 1.739067 CCCGAAGCAGAAAACCTAGG 58.261 55.000 7.41 7.41 0.00 3.02
228 229 1.087501 GCCCGAAGCAGAAAACCTAG 58.912 55.000 0.00 0.00 42.97 3.02
229 230 0.672401 CGCCCGAAGCAGAAAACCTA 60.672 55.000 0.00 0.00 44.04 3.08
230 231 1.966451 CGCCCGAAGCAGAAAACCT 60.966 57.895 0.00 0.00 44.04 3.50
231 232 2.561373 CGCCCGAAGCAGAAAACC 59.439 61.111 0.00 0.00 44.04 3.27
232 233 1.964373 TCCGCCCGAAGCAGAAAAC 60.964 57.895 0.00 0.00 44.04 2.43
233 234 1.964373 GTCCGCCCGAAGCAGAAAA 60.964 57.895 0.00 0.00 44.04 2.29
234 235 2.358247 GTCCGCCCGAAGCAGAAA 60.358 61.111 0.00 0.00 44.04 2.52
235 236 4.388499 GGTCCGCCCGAAGCAGAA 62.388 66.667 0.00 0.00 44.04 3.02
248 249 4.410400 CAGGCTTGGGTCCGGTCC 62.410 72.222 9.52 9.52 0.00 4.46
249 250 4.410400 CCAGGCTTGGGTCCGGTC 62.410 72.222 7.05 0.00 41.05 4.79
282 283 1.056660 ATACCTAGCCATCCGTTGGG 58.943 55.000 4.03 0.00 46.55 4.12
284 285 2.352421 CGGTATACCTAGCCATCCGTTG 60.352 54.545 19.68 0.00 33.20 4.10
285 286 1.891150 CGGTATACCTAGCCATCCGTT 59.109 52.381 19.68 0.00 33.20 4.44
286 287 1.202976 ACGGTATACCTAGCCATCCGT 60.203 52.381 19.68 6.41 43.68 4.69
287 288 1.201647 CACGGTATACCTAGCCATCCG 59.798 57.143 19.68 5.76 41.77 4.18
288 289 1.549170 CCACGGTATACCTAGCCATCC 59.451 57.143 19.68 0.00 0.00 3.51
289 290 2.230750 GTCCACGGTATACCTAGCCATC 59.769 54.545 19.68 1.30 0.00 3.51
290 291 2.158355 AGTCCACGGTATACCTAGCCAT 60.158 50.000 19.68 0.00 0.00 4.40
291 292 1.216175 AGTCCACGGTATACCTAGCCA 59.784 52.381 19.68 0.00 0.00 4.75
292 293 1.992538 AGTCCACGGTATACCTAGCC 58.007 55.000 19.68 4.16 0.00 3.93
293 294 3.749226 AGTAGTCCACGGTATACCTAGC 58.251 50.000 19.68 5.68 0.00 3.42
294 295 5.371526 TCAAGTAGTCCACGGTATACCTAG 58.628 45.833 19.68 11.29 0.00 3.02
295 296 5.372343 TCAAGTAGTCCACGGTATACCTA 57.628 43.478 19.68 1.39 0.00 3.08
296 297 4.240881 TCAAGTAGTCCACGGTATACCT 57.759 45.455 19.68 4.32 0.00 3.08
297 298 4.795308 GCATCAAGTAGTCCACGGTATACC 60.795 50.000 12.27 12.27 0.00 2.73
298 299 4.037684 AGCATCAAGTAGTCCACGGTATAC 59.962 45.833 0.00 0.00 0.00 1.47
299 300 4.212716 AGCATCAAGTAGTCCACGGTATA 58.787 43.478 0.00 0.00 0.00 1.47
300 301 3.031736 AGCATCAAGTAGTCCACGGTAT 58.968 45.455 0.00 0.00 0.00 2.73
301 302 2.426024 GAGCATCAAGTAGTCCACGGTA 59.574 50.000 0.00 0.00 33.17 4.02
302 303 1.204941 GAGCATCAAGTAGTCCACGGT 59.795 52.381 0.00 0.00 33.17 4.83
303 304 1.204704 TGAGCATCAAGTAGTCCACGG 59.795 52.381 0.00 0.00 45.97 4.94
304 305 2.654749 TGAGCATCAAGTAGTCCACG 57.345 50.000 0.00 0.00 45.97 4.94
320 321 2.816746 CCCATGGGCTCCATTTGAG 58.183 57.895 20.41 0.00 42.23 3.02
331 332 1.153289 CGAGAGACTTGCCCATGGG 60.153 63.158 27.87 27.87 38.57 4.00
332 333 1.817099 GCGAGAGACTTGCCCATGG 60.817 63.158 4.14 4.14 35.00 3.66
333 334 0.463295 ATGCGAGAGACTTGCCCATG 60.463 55.000 8.27 0.00 39.96 3.66
334 335 0.463295 CATGCGAGAGACTTGCCCAT 60.463 55.000 8.27 0.00 39.96 4.00
335 336 1.078918 CATGCGAGAGACTTGCCCA 60.079 57.895 8.27 0.00 39.96 5.36
336 337 0.175760 TACATGCGAGAGACTTGCCC 59.824 55.000 8.27 0.00 39.96 5.36
337 338 1.134965 AGTACATGCGAGAGACTTGCC 60.135 52.381 8.27 0.00 39.96 4.52
338 339 2.285827 AGTACATGCGAGAGACTTGC 57.714 50.000 0.00 4.26 41.00 4.01
339 340 4.346970 CACTAGTACATGCGAGAGACTTG 58.653 47.826 0.00 0.00 0.00 3.16
340 341 3.378742 CCACTAGTACATGCGAGAGACTT 59.621 47.826 0.00 0.00 0.00 3.01
341 342 2.946329 CCACTAGTACATGCGAGAGACT 59.054 50.000 0.00 0.00 0.00 3.24
342 343 2.033550 CCCACTAGTACATGCGAGAGAC 59.966 54.545 0.00 0.00 0.00 3.36
343 344 2.298610 CCCACTAGTACATGCGAGAGA 58.701 52.381 0.00 0.00 0.00 3.10
344 345 1.269309 GCCCACTAGTACATGCGAGAG 60.269 57.143 0.00 0.00 0.00 3.20
345 346 0.744874 GCCCACTAGTACATGCGAGA 59.255 55.000 0.00 0.00 0.00 4.04
346 347 0.747255 AGCCCACTAGTACATGCGAG 59.253 55.000 0.00 0.00 0.00 5.03
347 348 0.459899 CAGCCCACTAGTACATGCGA 59.540 55.000 0.00 0.00 0.00 5.10
348 349 0.530650 CCAGCCCACTAGTACATGCG 60.531 60.000 0.00 0.00 0.00 4.73
349 350 0.179045 CCCAGCCCACTAGTACATGC 60.179 60.000 0.00 0.00 0.00 4.06
350 351 0.179045 GCCCAGCCCACTAGTACATG 60.179 60.000 0.00 0.00 0.00 3.21
351 352 0.326618 AGCCCAGCCCACTAGTACAT 60.327 55.000 0.00 0.00 0.00 2.29
352 353 0.546747 AAGCCCAGCCCACTAGTACA 60.547 55.000 0.00 0.00 0.00 2.90
353 354 0.618981 AAAGCCCAGCCCACTAGTAC 59.381 55.000 0.00 0.00 0.00 2.73
354 355 1.280998 GAAAAGCCCAGCCCACTAGTA 59.719 52.381 0.00 0.00 0.00 1.82
355 356 0.038310 GAAAAGCCCAGCCCACTAGT 59.962 55.000 0.00 0.00 0.00 2.57
356 357 0.329596 AGAAAAGCCCAGCCCACTAG 59.670 55.000 0.00 0.00 0.00 2.57
357 358 0.777446 AAGAAAAGCCCAGCCCACTA 59.223 50.000 0.00 0.00 0.00 2.74
358 359 0.105504 AAAGAAAAGCCCAGCCCACT 60.106 50.000 0.00 0.00 0.00 4.00
359 360 0.758734 AAAAGAAAAGCCCAGCCCAC 59.241 50.000 0.00 0.00 0.00 4.61
360 361 0.758123 CAAAAGAAAAGCCCAGCCCA 59.242 50.000 0.00 0.00 0.00 5.36
361 362 0.603707 GCAAAAGAAAAGCCCAGCCC 60.604 55.000 0.00 0.00 0.00 5.19
362 363 0.945743 CGCAAAAGAAAAGCCCAGCC 60.946 55.000 0.00 0.00 0.00 4.85
363 364 0.249447 ACGCAAAAGAAAAGCCCAGC 60.249 50.000 0.00 0.00 0.00 4.85
364 365 1.066908 TCACGCAAAAGAAAAGCCCAG 59.933 47.619 0.00 0.00 0.00 4.45
365 366 1.107114 TCACGCAAAAGAAAAGCCCA 58.893 45.000 0.00 0.00 0.00 5.36
366 367 2.217429 TTCACGCAAAAGAAAAGCCC 57.783 45.000 0.00 0.00 0.00 5.19
367 368 2.539688 CCTTTCACGCAAAAGAAAAGCC 59.460 45.455 10.74 0.00 38.30 4.35
368 369 2.539688 CCCTTTCACGCAAAAGAAAAGC 59.460 45.455 10.74 0.00 38.30 3.51
369 370 3.796717 GTCCCTTTCACGCAAAAGAAAAG 59.203 43.478 10.74 0.00 38.30 2.27
370 371 3.429684 GGTCCCTTTCACGCAAAAGAAAA 60.430 43.478 10.74 0.00 38.30 2.29
371 372 2.100087 GGTCCCTTTCACGCAAAAGAAA 59.900 45.455 10.74 0.00 38.30 2.52
372 373 1.679153 GGTCCCTTTCACGCAAAAGAA 59.321 47.619 10.74 0.00 38.30 2.52
373 374 1.314730 GGTCCCTTTCACGCAAAAGA 58.685 50.000 10.74 0.00 38.30 2.52
374 375 0.040425 CGGTCCCTTTCACGCAAAAG 60.040 55.000 3.71 3.71 36.26 2.27
375 376 1.448922 CCGGTCCCTTTCACGCAAAA 61.449 55.000 0.00 0.00 0.00 2.44
376 377 1.894756 CCGGTCCCTTTCACGCAAA 60.895 57.895 0.00 0.00 0.00 3.68
377 378 2.119484 ATCCGGTCCCTTTCACGCAA 62.119 55.000 0.00 0.00 0.00 4.85
378 379 2.119484 AATCCGGTCCCTTTCACGCA 62.119 55.000 0.00 0.00 0.00 5.24
379 380 1.376812 AATCCGGTCCCTTTCACGC 60.377 57.895 0.00 0.00 0.00 5.34
380 381 1.644786 GCAATCCGGTCCCTTTCACG 61.645 60.000 0.00 0.00 0.00 4.35
381 382 1.313091 GGCAATCCGGTCCCTTTCAC 61.313 60.000 0.00 0.00 0.00 3.18
382 383 1.001393 GGCAATCCGGTCCCTTTCA 60.001 57.895 0.00 0.00 0.00 2.69
383 384 1.753078 GGGCAATCCGGTCCCTTTC 60.753 63.158 0.00 0.00 37.08 2.62
384 385 2.359011 GGGCAATCCGGTCCCTTT 59.641 61.111 0.00 0.00 37.08 3.11
387 388 2.819284 CCTAGGGCAATCCGGTCCC 61.819 68.421 0.00 8.53 41.52 4.46
388 389 1.632965 AACCTAGGGCAATCCGGTCC 61.633 60.000 14.81 0.00 41.52 4.46
389 390 0.255033 AAACCTAGGGCAATCCGGTC 59.745 55.000 14.81 0.00 41.52 4.79
390 391 1.587066 TAAACCTAGGGCAATCCGGT 58.413 50.000 14.81 0.00 41.52 5.28
391 392 2.092592 ACTTAAACCTAGGGCAATCCGG 60.093 50.000 14.81 0.00 41.52 5.14
392 393 3.277142 ACTTAAACCTAGGGCAATCCG 57.723 47.619 14.81 0.00 41.52 4.18
393 394 7.655521 AAATAACTTAAACCTAGGGCAATCC 57.344 36.000 14.81 0.00 0.00 3.01
418 419 6.788598 AAAACTTAAACCCTACCCGAAAAA 57.211 33.333 0.00 0.00 0.00 1.94
419 420 6.788598 AAAAACTTAAACCCTACCCGAAAA 57.211 33.333 0.00 0.00 0.00 2.29
460 461 4.150804 GTCACTCTAGTTAAGTGCAAGCAC 59.849 45.833 16.97 16.97 43.09 4.40
461 462 4.039245 AGTCACTCTAGTTAAGTGCAAGCA 59.961 41.667 5.40 0.00 43.09 3.91
462 463 4.561105 AGTCACTCTAGTTAAGTGCAAGC 58.439 43.478 5.40 0.00 43.09 4.01
463 464 5.802956 GCTAGTCACTCTAGTTAAGTGCAAG 59.197 44.000 5.40 4.40 45.65 4.01
464 465 5.336531 GGCTAGTCACTCTAGTTAAGTGCAA 60.337 44.000 5.40 0.00 45.65 4.08
465 466 4.158025 GGCTAGTCACTCTAGTTAAGTGCA 59.842 45.833 5.40 0.00 45.65 4.57
466 467 4.399934 AGGCTAGTCACTCTAGTTAAGTGC 59.600 45.833 0.00 2.21 45.65 4.40
467 468 5.220700 CGAGGCTAGTCACTCTAGTTAAGTG 60.221 48.000 0.00 4.11 45.65 3.16
468 469 4.877251 CGAGGCTAGTCACTCTAGTTAAGT 59.123 45.833 0.00 0.00 45.65 2.24
469 470 5.117584 TCGAGGCTAGTCACTCTAGTTAAG 58.882 45.833 0.00 0.00 45.65 1.85
470 471 5.095145 TCGAGGCTAGTCACTCTAGTTAA 57.905 43.478 0.00 0.00 45.65 2.01
471 472 4.750021 TCGAGGCTAGTCACTCTAGTTA 57.250 45.455 0.00 0.00 45.65 2.24
472 473 3.630892 TCGAGGCTAGTCACTCTAGTT 57.369 47.619 0.00 0.00 45.65 2.24
473 474 3.630892 TTCGAGGCTAGTCACTCTAGT 57.369 47.619 0.00 0.00 45.65 2.57
474 475 3.242936 GCTTTCGAGGCTAGTCACTCTAG 60.243 52.174 0.00 0.00 46.39 2.43
475 476 2.683867 GCTTTCGAGGCTAGTCACTCTA 59.316 50.000 0.00 0.00 0.00 2.43
476 477 1.474879 GCTTTCGAGGCTAGTCACTCT 59.525 52.381 0.00 0.00 0.00 3.24
477 478 1.795889 CGCTTTCGAGGCTAGTCACTC 60.796 57.143 0.00 0.00 38.10 3.51
478 479 0.171455 CGCTTTCGAGGCTAGTCACT 59.829 55.000 0.00 0.00 38.10 3.41
479 480 0.802607 CCGCTTTCGAGGCTAGTCAC 60.803 60.000 0.00 0.00 38.10 3.67
480 481 0.963856 TCCGCTTTCGAGGCTAGTCA 60.964 55.000 0.00 0.00 38.10 3.41
481 482 0.525882 GTCCGCTTTCGAGGCTAGTC 60.526 60.000 10.00 0.00 38.10 2.59
482 483 1.511768 GTCCGCTTTCGAGGCTAGT 59.488 57.895 10.00 0.00 38.10 2.57
483 484 1.586564 CGTCCGCTTTCGAGGCTAG 60.587 63.158 10.00 0.00 38.10 3.42
484 485 1.870055 AACGTCCGCTTTCGAGGCTA 61.870 55.000 10.00 0.00 38.10 3.93
485 486 2.710724 AAACGTCCGCTTTCGAGGCT 62.711 55.000 10.00 0.00 38.10 4.58
486 487 2.315386 AAACGTCCGCTTTCGAGGC 61.315 57.895 0.00 2.89 38.10 4.70
487 488 1.491563 CAAACGTCCGCTTTCGAGG 59.508 57.895 0.00 0.00 38.10 4.63
506 507 1.784525 GTGCATATACACCCGAGAGC 58.215 55.000 0.00 0.00 34.35 4.09
515 516 6.860790 TTTCCTATATCCGGTGCATATACA 57.139 37.500 0.00 0.00 0.00 2.29
519 520 6.367374 TCAATTTCCTATATCCGGTGCATA 57.633 37.500 0.00 0.00 0.00 3.14
580 582 4.775253 AGAAGGTCAAGTTTGTTCCCAAAA 59.225 37.500 0.00 0.00 41.99 2.44
633 635 7.861176 TTAGTTTTTCATGCAAAACGGTATC 57.139 32.000 22.28 3.93 46.84 2.24
639 641 8.009409 GCTTGGTATTAGTTTTTCATGCAAAAC 58.991 33.333 21.44 21.44 44.00 2.43
647 649 5.480073 AGGCATGCTTGGTATTAGTTTTTCA 59.520 36.000 18.92 0.00 0.00 2.69
836 855 1.883021 CCCGATGTTTTGGCAGGAC 59.117 57.895 0.00 0.00 0.00 3.85
852 871 1.271379 TCATCGTGTGGATATACGCCC 59.729 52.381 0.00 0.00 40.65 6.13
855 874 8.905103 TTAATGTATCATCGTGTGGATATACG 57.095 34.615 0.00 0.00 41.98 3.06
867 888 5.984627 TGGCGTTGAATTAATGTATCATCG 58.015 37.500 11.91 11.91 38.59 3.84
1009 1031 0.037326 TTCCTGGTAGCGTTGCTCTG 60.037 55.000 0.00 0.00 40.44 3.35
1168 2731 9.436957 AGTGACTTGAATACGAATGAAAGTAAT 57.563 29.630 0.00 0.00 0.00 1.89
1193 2756 5.508200 TTTGGTAAACTAAACAGGTGCAG 57.492 39.130 0.00 0.00 0.00 4.41
1209 2772 5.352016 CGGGAAAATAGTGACGATTTTGGTA 59.648 40.000 18.69 0.00 36.78 3.25
1229 2792 4.282195 TGATGTATGTATGCATGTACGGGA 59.718 41.667 10.16 0.00 36.58 5.14
1276 2845 5.010719 GCAAGTTCAATCCATGATCCATGAT 59.989 40.000 8.38 0.00 43.81 2.45
1349 2936 0.248907 ATACGGTCTGGCAACGATCG 60.249 55.000 14.88 14.88 45.04 3.69
1445 3035 7.865706 TGAAATTATTCCTCTAGCCAGAAAC 57.134 36.000 0.00 0.00 34.49 2.78
1482 3072 4.389687 GTCGGTAACCAATACGACATTTGT 59.610 41.667 10.69 0.00 37.67 2.83
1538 3128 6.549364 TCTTGACCAAAGTAACAAATGTGGAT 59.451 34.615 0.00 0.00 37.18 3.41
1720 3314 2.567615 ACCATCAAAGCGTAGAGTTCCT 59.432 45.455 0.00 0.00 0.00 3.36
1828 3423 7.534085 TTATACTTTCGGTGCACTTTGATAG 57.466 36.000 17.98 17.07 0.00 2.08
1880 3489 0.802494 CGGTGGTTTTGGAATCTCGG 59.198 55.000 0.00 0.00 0.00 4.63
1892 3501 1.036707 CCAATGGTTGTTCGGTGGTT 58.963 50.000 0.00 0.00 0.00 3.67
1911 3520 3.050275 GGCTCGTTCTGGCACCAC 61.050 66.667 0.00 0.00 0.00 4.16
1912 3521 4.680237 CGGCTCGTTCTGGCACCA 62.680 66.667 0.00 0.00 0.00 4.17
1956 3565 0.105039 GGTCAACCCAGCTCCGATAG 59.895 60.000 0.00 0.00 0.00 2.08
1957 3566 0.325296 AGGTCAACCCAGCTCCGATA 60.325 55.000 0.00 0.00 36.42 2.92
1958 3567 1.201429 AAGGTCAACCCAGCTCCGAT 61.201 55.000 0.00 0.00 36.42 4.18
1959 3568 1.841556 AAGGTCAACCCAGCTCCGA 60.842 57.895 0.00 0.00 36.42 4.55
1960 3569 1.672356 CAAGGTCAACCCAGCTCCG 60.672 63.158 0.00 0.00 36.42 4.63
1961 3570 1.973812 GCAAGGTCAACCCAGCTCC 60.974 63.158 6.28 0.00 36.42 4.70
1962 3571 1.973812 GGCAAGGTCAACCCAGCTC 60.974 63.158 11.70 1.63 36.77 4.09
1963 3572 2.116125 GGCAAGGTCAACCCAGCT 59.884 61.111 11.70 0.00 36.77 4.24
1964 3573 3.365265 CGGCAAGGTCAACCCAGC 61.365 66.667 5.20 5.20 36.42 4.85
1965 3574 3.365265 GCGGCAAGGTCAACCCAG 61.365 66.667 0.00 0.00 36.42 4.45
1966 3575 4.196778 TGCGGCAAGGTCAACCCA 62.197 61.111 0.00 0.00 36.42 4.51
1967 3576 3.365265 CTGCGGCAAGGTCAACCC 61.365 66.667 3.44 0.00 36.42 4.11
1968 3577 2.594592 ACTGCGGCAAGGTCAACC 60.595 61.111 3.44 0.00 0.00 3.77
1969 3578 2.946762 GACTGCGGCAAGGTCAAC 59.053 61.111 15.14 0.00 0.00 3.18
1970 3579 2.664851 CGACTGCGGCAAGGTCAA 60.665 61.111 18.65 0.00 0.00 3.18
1981 3590 2.370647 GATAGGGGAGTGGCGACTGC 62.371 65.000 12.00 12.00 39.77 4.40
1982 3591 1.742768 GATAGGGGAGTGGCGACTG 59.257 63.158 5.94 0.00 30.16 3.51
1983 3592 1.828660 CGATAGGGGAGTGGCGACT 60.829 63.158 0.00 0.00 33.98 4.18
1984 3593 2.728817 CGATAGGGGAGTGGCGAC 59.271 66.667 0.00 0.00 0.00 5.19
2098 3707 4.637977 CCCTTCTTATTCTCAGCCTGTTTC 59.362 45.833 0.00 0.00 0.00 2.78
2110 3719 8.567285 TCTTTTGAGTGAATCCCTTCTTATTC 57.433 34.615 0.00 0.00 33.57 1.75
2156 3765 1.135402 GCCCGTGAAATTAGCAACAGG 60.135 52.381 0.00 0.00 0.00 4.00
2204 3813 2.093500 TCGCTGGATTATCTGCAAGTGT 60.093 45.455 10.09 0.00 33.76 3.55
2253 3862 8.144862 TGGGGCAGAAAATTTTTATAATCTGT 57.855 30.769 13.93 0.00 37.27 3.41
2262 3871 4.097741 GCAAGTTTGGGGCAGAAAATTTTT 59.902 37.500 4.63 0.00 0.00 1.94
2263 3872 3.631686 GCAAGTTTGGGGCAGAAAATTTT 59.368 39.130 2.28 2.28 0.00 1.82
2265 3874 2.172293 TGCAAGTTTGGGGCAGAAAATT 59.828 40.909 0.00 0.00 32.95 1.82
2266 3875 1.767681 TGCAAGTTTGGGGCAGAAAAT 59.232 42.857 0.00 0.00 32.95 1.82
2368 4008 1.078143 GGGAGTGGATGCAGGACAC 60.078 63.158 9.45 9.45 35.43 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.