AutoCloner

Multiple sequence alignment - TraesCS6D01G018000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6D01G018000	chr6D	100.000	2549	0	0	1	2549	7405367	7402819	0.000000e+00	4708.0
1	TraesCS6D01G018000	chr6D	84.644	1068	136	11	516	1557	7901376	7902441	0.000000e+00	1038.0
2	TraesCS6D01G018000	chr6D	75.327	1070	223	21	525	1563	9548098	9547039	2.290000e-130	475.0
3	TraesCS6D01G018000	chr6D	86.139	202	28	0	534	735	8578806	8578605	4.270000e-53	219.0
4	TraesCS6D01G018000	chr6B	86.071	2082	179	36	536	2549	13818788	13816750	0.000000e+00	2135.0
5	TraesCS6D01G018000	chr6B	81.947	1058	144	17	533	1553	14340571	14341618	0.000000e+00	852.0
6	TraesCS6D01G018000	chr6B	79.211	837	155	17	737	1565	39311432	39312257	4.760000e-157	564.0
7	TraesCS6D01G018000	chr6B	86.765	204	27	0	525	728	53077032	53076829	7.090000e-56	228.0
8	TraesCS6D01G018000	chr6B	86.275	204	28	0	525	728	16338935	16339138	3.300000e-54	222.0
9	TraesCS6D01G018000	chr6A	89.977	878	42	3	539	1392	7224584	7223729	0.000000e+00	1092.0
10	TraesCS6D01G018000	chr6A	83.381	1053	159	14	516	1557	8175085	8176132	0.000000e+00	961.0
11	TraesCS6D01G018000	chr6A	84.149	858	107	4	542	1374	7300754	7299901	0.000000e+00	804.0
12	TraesCS6D01G018000	chr6A	84.499	529	59	12	1432	1956	7299711	7299202	3.790000e-138	501.0
13	TraesCS6D01G018000	chr6A	87.569	362	36	6	2142	2499	7297879	7297523	6.560000e-111	411.0
14	TraesCS6D01G018000	chr6A	93.056	72	2	3	224	292	44978359	44978288	4.490000e-18	102.0
15	TraesCS6D01G018000	chr6A	93.750	64	4	0	229	292	431996041	431996104	2.090000e-16	97.1
16	TraesCS6D01G018000	chr7B	83.028	1037	149	15	536	1549	623951217	623950185	0.000000e+00	915.0
17	TraesCS6D01G018000	chr7D	82.308	1040	153	12	536	1549	568371426	568370392	0.000000e+00	872.0
18	TraesCS6D01G018000	chr7A	81.985	1038	160	8	536	1549	657024701	657023667	0.000000e+00	856.0
19	TraesCS6D01G018000	chr7A	93.846	65	3	1	229	292	271372495	271372431	2.090000e-16	97.1
20	TraesCS6D01G018000	chr4A	79.437	1065	181	21	527	1561	667380165	667381221	0.000000e+00	719.0
21	TraesCS6D01G018000	chr4A	93.846	65	4	0	226	290	13775303	13775367	5.800000e-17	99.0
22	TraesCS6D01G018000	chr1B	77.516	1063	194	29	527	1556	630644863	630645913	4.690000e-167	597.0
23	TraesCS6D01G018000	chr5B	75.612	1062	210	33	534	1560	556628117	556627070	4.930000e-132	481.0
24	TraesCS6D01G018000	chr5B	93.939	66	4	0	227	292	324962672	324962607	1.610000e-17	100.0
25	TraesCS6D01G018000	chr5B	95.238	63	2	1	230	292	317545989	317546050	5.800000e-17	99.0
26	TraesCS6D01G018000	chr5D	93.939	66	2	2	229	292	70202639	70202574	5.800000e-17	99.0
27	TraesCS6D01G018000	chr5D	95.161	62	2	1	231	292	279837361	279837421	2.090000e-16	97.1
28	TraesCS6D01G018000	chr3D	92.647	68	3	2	227	292	136769900	136769833	2.090000e-16	97.1

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6D01G018000	chr6D	7402819	7405367	2548	True	4708	4708	100.000000	1	2549	1	chr6D.!!$R1	2548
1	TraesCS6D01G018000	chr6D	7901376	7902441	1065	False	1038	1038	84.644000	516	1557	1	chr6D.!!$F1	1041
2	TraesCS6D01G018000	chr6D	9547039	9548098	1059	True	475	475	75.327000	525	1563	1	chr6D.!!$R3	1038
3	TraesCS6D01G018000	chr6B	13816750	13818788	2038	True	2135	2135	86.071000	536	2549	1	chr6B.!!$R1	2013
4	TraesCS6D01G018000	chr6B	14340571	14341618	1047	False	852	852	81.947000	533	1553	1	chr6B.!!$F1	1020
5	TraesCS6D01G018000	chr6B	39311432	39312257	825	False	564	564	79.211000	737	1565	1	chr6B.!!$F3	828
6	TraesCS6D01G018000	chr6A	7223729	7224584	855	True	1092	1092	89.977000	539	1392	1	chr6A.!!$R1	853
7	TraesCS6D01G018000	chr6A	8175085	8176132	1047	False	961	961	83.381000	516	1557	1	chr6A.!!$F1	1041
8	TraesCS6D01G018000	chr6A	7297523	7300754	3231	True	572	804	85.405667	542	2499	3	chr6A.!!$R3	1957
9	TraesCS6D01G018000	chr7B	623950185	623951217	1032	True	915	915	83.028000	536	1549	1	chr7B.!!$R1	1013
10	TraesCS6D01G018000	chr7D	568370392	568371426	1034	True	872	872	82.308000	536	1549	1	chr7D.!!$R1	1013
11	TraesCS6D01G018000	chr7A	657023667	657024701	1034	True	856	856	81.985000	536	1549	1	chr7A.!!$R2	1013
12	TraesCS6D01G018000	chr4A	667380165	667381221	1056	False	719	719	79.437000	527	1561	1	chr4A.!!$F2	1034
13	TraesCS6D01G018000	chr1B	630644863	630645913	1050	False	597	597	77.516000	527	1556	1	chr1B.!!$F1	1029
14	TraesCS6D01G018000	chr5B	556627070	556628117	1047	True	481	481	75.612000	534	1560	1	chr5B.!!$R2	1026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
129	130	0.032267	GCATCTACCTCCCGTGCTAC	59.968	60.0	0.0	0.0	33.25	3.58	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1971	3370	0.033796	CACCTGGAGGCACATGGATT	60.034	55.0	0.0	0.0	39.32	3.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
23	24	4.877378	ACTACGGATGTGTTTGGTTAGA	57.123	40.909	0.00	0.00	0.00	2.10
24	25	5.416271	ACTACGGATGTGTTTGGTTAGAT	57.584	39.130	0.00	0.00	0.00	1.98
25	26	5.175859	ACTACGGATGTGTTTGGTTAGATG	58.824	41.667	0.00	0.00	0.00	2.90
26	27	3.343617	ACGGATGTGTTTGGTTAGATGG	58.656	45.455	0.00	0.00	0.00	3.51
27	28	3.008594	ACGGATGTGTTTGGTTAGATGGA	59.991	43.478	0.00	0.00	0.00	3.41
28	29	3.374058	CGGATGTGTTTGGTTAGATGGAC	59.626	47.826	0.00	0.00	0.00	4.02
29	30	4.331968	GGATGTGTTTGGTTAGATGGACA	58.668	43.478	0.00	0.00	0.00	4.02
30	31	4.949856	GGATGTGTTTGGTTAGATGGACAT	59.050	41.667	0.00	0.00	0.00	3.06
31	32	5.418840	GGATGTGTTTGGTTAGATGGACATT	59.581	40.000	0.00	0.00	0.00	2.71
32	33	5.703978	TGTGTTTGGTTAGATGGACATTG	57.296	39.130	0.00	0.00	0.00	2.82
33	34	4.022416	TGTGTTTGGTTAGATGGACATTGC	60.022	41.667	0.00	0.00	0.00	3.56
34	35	4.218417	GTGTTTGGTTAGATGGACATTGCT	59.782	41.667	0.00	0.00	0.00	3.91
35	36	5.414454	GTGTTTGGTTAGATGGACATTGCTA	59.586	40.000	0.00	0.00	0.00	3.49
36	37	5.647658	TGTTTGGTTAGATGGACATTGCTAG	59.352	40.000	0.00	0.00	0.00	3.42
37	38	5.692115	TTGGTTAGATGGACATTGCTAGA	57.308	39.130	0.00	0.00	0.00	2.43
38	39	5.692115	TGGTTAGATGGACATTGCTAGAA	57.308	39.130	0.00	0.00	0.00	2.10
39	40	6.252599	TGGTTAGATGGACATTGCTAGAAT	57.747	37.500	0.00	0.00	0.00	2.40
40	41	6.057533	TGGTTAGATGGACATTGCTAGAATG	58.942	40.000	11.20	11.20	0.00	2.67
41	42	6.126796	TGGTTAGATGGACATTGCTAGAATGA	60.127	38.462	16.77	1.71	0.00	2.57
42	43	6.767902	GGTTAGATGGACATTGCTAGAATGAA	59.232	38.462	16.77	6.88	0.00	2.57
43	44	7.446625	GGTTAGATGGACATTGCTAGAATGAAT	59.553	37.037	16.77	9.89	0.00	2.57
44	45	9.494271	GTTAGATGGACATTGCTAGAATGAATA	57.506	33.333	16.77	6.88	0.00	1.75
46	47	8.563123	AGATGGACATTGCTAGAATGAATATG	57.437	34.615	16.77	1.00	0.00	1.78
47	48	7.610692	AGATGGACATTGCTAGAATGAATATGG	59.389	37.037	16.77	0.00	0.00	2.74
48	49	6.005823	TGGACATTGCTAGAATGAATATGGG	58.994	40.000	16.77	0.00	0.00	4.00
49	50	5.105997	GGACATTGCTAGAATGAATATGGGC	60.106	44.000	16.77	0.00	0.00	5.36
50	51	5.387788	ACATTGCTAGAATGAATATGGGCA	58.612	37.500	16.77	0.00	0.00	5.36
51	52	6.014647	ACATTGCTAGAATGAATATGGGCAT	58.985	36.000	16.77	0.00	0.00	4.40
52	53	6.152323	ACATTGCTAGAATGAATATGGGCATC	59.848	38.462	16.77	0.00	0.00	3.91
53	54	4.592942	TGCTAGAATGAATATGGGCATCC	58.407	43.478	0.00	0.00	0.00	3.51
54	55	3.950395	GCTAGAATGAATATGGGCATCCC	59.050	47.826	0.00	0.00	45.71	3.85
55	56	4.324874	GCTAGAATGAATATGGGCATCCCT	60.325	45.833	3.27	0.00	45.70	4.20
56	57	5.104360	GCTAGAATGAATATGGGCATCCCTA	60.104	44.000	3.27	0.00	45.70	3.53
57	58	6.410157	GCTAGAATGAATATGGGCATCCCTAT	60.410	42.308	3.27	0.00	45.70	2.57
58	59	6.011122	AGAATGAATATGGGCATCCCTATC	57.989	41.667	3.27	0.00	45.70	2.08
59	60	3.912496	TGAATATGGGCATCCCTATCG	57.088	47.619	3.27	0.00	45.70	2.92
60	61	3.449918	TGAATATGGGCATCCCTATCGA	58.550	45.455	3.27	0.00	45.70	3.59
61	62	3.452264	TGAATATGGGCATCCCTATCGAG	59.548	47.826	3.27	0.00	45.70	4.04
62	63	1.195115	TATGGGCATCCCTATCGAGC	58.805	55.000	3.27	0.00	45.70	5.03
63	64	0.546267	ATGGGCATCCCTATCGAGCT	60.546	55.000	3.27	0.00	45.70	4.09
64	65	0.114364	TGGGCATCCCTATCGAGCTA	59.886	55.000	3.27	0.00	45.70	3.32
65	66	0.820871	GGGCATCCCTATCGAGCTAG	59.179	60.000	0.00	0.00	41.34	3.42
66	67	1.617263	GGGCATCCCTATCGAGCTAGA	60.617	57.143	0.00	0.00	41.34	2.43
67	68	2.383855	GGCATCCCTATCGAGCTAGAT	58.616	52.381	14.10	14.10	34.79	1.98
68	69	3.556999	GGCATCCCTATCGAGCTAGATA	58.443	50.000	14.82	14.82	32.39	1.98
69	70	3.568007	GGCATCCCTATCGAGCTAGATAG	59.432	52.174	27.82	27.82	45.88	2.08
77	78	5.931294	CTATCGAGCTAGATAGGGATACCA	58.069	45.833	27.34	3.60	45.35	3.25
78	79	6.517013	TATCGAGCTAGATAGGGATACCAT	57.483	41.667	12.02	0.00	45.35	3.55
79	80	6.299922	TATCGAGCTAGATAGGGATACCATG	58.700	44.000	12.02	0.00	45.35	3.66
80	81	6.126449	TATCGAGCTAGATAGGGATACCATGT	60.126	42.308	12.02	0.00	45.35	3.21
81	82	7.072076	TATCGAGCTAGATAGGGATACCATGTA	59.928	40.741	12.02	0.00	45.35	2.29
93	94	5.788450	GGATACCATGTAAGGATGAGTCTG	58.212	45.833	0.00	0.00	0.00	3.51
94	95	3.550437	ACCATGTAAGGATGAGTCTGC	57.450	47.619	0.00	0.00	0.00	4.26
95	96	2.840038	ACCATGTAAGGATGAGTCTGCA	59.160	45.455	0.00	0.00	0.00	4.41
96	97	3.118482	ACCATGTAAGGATGAGTCTGCAG	60.118	47.826	7.63	7.63	0.00	4.41
97	98	2.680312	TGTAAGGATGAGTCTGCAGC	57.320	50.000	9.47	4.26	0.00	5.25
98	99	1.208052	TGTAAGGATGAGTCTGCAGCC	59.792	52.381	9.47	0.00	44.50	4.85
100	101	2.894387	GGATGAGTCTGCAGCCGC	60.894	66.667	9.47	0.00	34.28	6.53
102	103	2.435586	ATGAGTCTGCAGCCGCAC	60.436	61.111	9.47	1.37	45.36	5.34
103	104	2.849120	GATGAGTCTGCAGCCGCACT	62.849	60.000	9.47	7.23	45.36	4.40
104	105	1.607801	ATGAGTCTGCAGCCGCACTA	61.608	55.000	9.47	0.00	45.36	2.74
105	106	1.807573	GAGTCTGCAGCCGCACTAC	60.808	63.158	9.47	0.00	45.36	2.73
106	107	2.815647	GTCTGCAGCCGCACTACC	60.816	66.667	9.47	0.00	45.36	3.18
107	108	4.082523	TCTGCAGCCGCACTACCC	62.083	66.667	9.47	0.00	45.36	3.69
108	109	4.087892	CTGCAGCCGCACTACCCT	62.088	66.667	0.00	0.00	45.36	4.34
109	110	3.612247	CTGCAGCCGCACTACCCTT	62.612	63.158	0.00	0.00	45.36	3.95
110	111	3.127533	GCAGCCGCACTACCCTTG	61.128	66.667	0.00	0.00	38.36	3.61
111	112	3.127533	CAGCCGCACTACCCTTGC	61.128	66.667	0.00	0.00	36.57	4.01
112	113	3.636231	AGCCGCACTACCCTTGCA	61.636	61.111	0.00	0.00	40.20	4.08
113	114	2.438434	GCCGCACTACCCTTGCAT	60.438	61.111	0.00	0.00	40.20	3.96
114	115	2.472909	GCCGCACTACCCTTGCATC	61.473	63.158	0.00	0.00	40.20	3.91
115	116	1.221840	CCGCACTACCCTTGCATCT	59.778	57.895	0.00	0.00	40.20	2.90
116	117	0.464036	CCGCACTACCCTTGCATCTA	59.536	55.000	0.00	0.00	40.20	1.98
117	118	1.571919	CGCACTACCCTTGCATCTAC	58.428	55.000	0.00	0.00	40.20	2.59
118	119	1.806623	CGCACTACCCTTGCATCTACC	60.807	57.143	0.00	0.00	40.20	3.18
119	120	1.486726	GCACTACCCTTGCATCTACCT	59.513	52.381	0.00	0.00	39.93	3.08
120	121	2.483889	GCACTACCCTTGCATCTACCTC	60.484	54.545	0.00	0.00	39.93	3.85
121	122	2.103263	CACTACCCTTGCATCTACCTCC	59.897	54.545	0.00	0.00	0.00	4.30
122	123	1.694696	CTACCCTTGCATCTACCTCCC	59.305	57.143	0.00	0.00	0.00	4.30
123	124	1.338136	ACCCTTGCATCTACCTCCCG	61.338	60.000	0.00	0.00	0.00	5.14
124	125	1.338136	CCCTTGCATCTACCTCCCGT	61.338	60.000	0.00	0.00	0.00	5.28
125	126	0.179073	CCTTGCATCTACCTCCCGTG	60.179	60.000	0.00	0.00	0.00	4.94
126	127	0.811616	CTTGCATCTACCTCCCGTGC	60.812	60.000	0.00	0.00	36.39	5.34
127	128	1.264749	TTGCATCTACCTCCCGTGCT	61.265	55.000	0.00	0.00	36.78	4.40
128	129	0.396556	TGCATCTACCTCCCGTGCTA	60.397	55.000	0.00	0.00	36.78	3.49
129	130	0.032267	GCATCTACCTCCCGTGCTAC	59.968	60.000	0.00	0.00	33.25	3.58
130	131	0.674534	CATCTACCTCCCGTGCTACC	59.325	60.000	0.00	0.00	0.00	3.18
131	132	0.469518	ATCTACCTCCCGTGCTACCC	60.470	60.000	0.00	0.00	0.00	3.69
132	133	2.042639	TACCTCCCGTGCTACCCC	60.043	66.667	0.00	0.00	0.00	4.95
133	134	2.584873	CTACCTCCCGTGCTACCCCT	62.585	65.000	0.00	0.00	0.00	4.79
134	135	1.288508	TACCTCCCGTGCTACCCCTA	61.289	60.000	0.00	0.00	0.00	3.53
135	136	2.132352	CCTCCCGTGCTACCCCTAC	61.132	68.421	0.00	0.00	0.00	3.18
136	137	1.380785	CTCCCGTGCTACCCCTACA	60.381	63.158	0.00	0.00	0.00	2.74
137	138	0.759436	CTCCCGTGCTACCCCTACAT	60.759	60.000	0.00	0.00	0.00	2.29
138	139	0.757935	TCCCGTGCTACCCCTACATC	60.758	60.000	0.00	0.00	0.00	3.06
139	140	0.759436	CCCGTGCTACCCCTACATCT	60.759	60.000	0.00	0.00	0.00	2.90
140	141	1.479942	CCCGTGCTACCCCTACATCTA	60.480	57.143	0.00	0.00	0.00	1.98
141	142	1.612463	CCGTGCTACCCCTACATCTAC	59.388	57.143	0.00	0.00	0.00	2.59
142	143	1.612463	CGTGCTACCCCTACATCTACC	59.388	57.143	0.00	0.00	0.00	3.18
143	144	2.752154	CGTGCTACCCCTACATCTACCT	60.752	54.545	0.00	0.00	0.00	3.08
144	145	3.497405	CGTGCTACCCCTACATCTACCTA	60.497	52.174	0.00	0.00	0.00	3.08
145	146	3.825585	GTGCTACCCCTACATCTACCTAC	59.174	52.174	0.00	0.00	0.00	3.18
146	147	3.725797	TGCTACCCCTACATCTACCTACT	59.274	47.826	0.00	0.00	0.00	2.57
147	148	4.080687	GCTACCCCTACATCTACCTACTG	58.919	52.174	0.00	0.00	0.00	2.74
148	149	2.960163	ACCCCTACATCTACCTACTGC	58.040	52.381	0.00	0.00	0.00	4.40
149	150	1.887198	CCCCTACATCTACCTACTGCG	59.113	57.143	0.00	0.00	0.00	5.18
150	151	1.269998	CCCTACATCTACCTACTGCGC	59.730	57.143	0.00	0.00	0.00	6.09
151	152	1.269998	CCTACATCTACCTACTGCGCC	59.730	57.143	4.18	0.00	0.00	6.53
152	153	1.954382	CTACATCTACCTACTGCGCCA	59.046	52.381	4.18	0.00	0.00	5.69
153	154	0.460311	ACATCTACCTACTGCGCCAC	59.540	55.000	4.18	0.00	0.00	5.01
154	155	0.595053	CATCTACCTACTGCGCCACG	60.595	60.000	4.18	0.00	0.00	4.94
178	179	2.688507	GCTACAGCTGCTAGTTGTTGA	58.311	47.619	15.27	0.00	40.24	3.18
179	180	3.265791	GCTACAGCTGCTAGTTGTTGAT	58.734	45.455	15.27	0.00	40.24	2.57
180	181	3.308323	GCTACAGCTGCTAGTTGTTGATC	59.692	47.826	15.27	0.00	40.24	2.92
181	182	3.407424	ACAGCTGCTAGTTGTTGATCA	57.593	42.857	15.27	0.00	36.18	2.92
182	183	3.070018	ACAGCTGCTAGTTGTTGATCAC	58.930	45.455	15.27	0.00	36.18	3.06
183	184	2.417933	CAGCTGCTAGTTGTTGATCACC	59.582	50.000	0.00	0.00	0.00	4.02
184	185	2.304180	AGCTGCTAGTTGTTGATCACCT	59.696	45.455	0.00	0.00	0.00	4.00
185	186	3.515502	AGCTGCTAGTTGTTGATCACCTA	59.484	43.478	0.00	0.00	0.00	3.08
186	187	3.868077	GCTGCTAGTTGTTGATCACCTAG	59.132	47.826	0.00	4.40	40.58	3.02
187	188	4.382040	GCTGCTAGTTGTTGATCACCTAGA	60.382	45.833	16.39	6.24	40.22	2.43
188	189	5.073311	TGCTAGTTGTTGATCACCTAGAC	57.927	43.478	16.39	5.19	40.22	2.59
189	190	4.081642	TGCTAGTTGTTGATCACCTAGACC	60.082	45.833	16.39	5.82	40.22	3.85
190	191	4.081642	GCTAGTTGTTGATCACCTAGACCA	60.082	45.833	16.39	0.00	40.22	4.02
191	192	4.543590	AGTTGTTGATCACCTAGACCAG	57.456	45.455	0.00	0.00	0.00	4.00
192	193	4.160329	AGTTGTTGATCACCTAGACCAGA	58.840	43.478	0.00	0.00	0.00	3.86
193	194	4.021016	AGTTGTTGATCACCTAGACCAGAC	60.021	45.833	0.00	0.00	0.00	3.51
194	195	2.492088	TGTTGATCACCTAGACCAGACG	59.508	50.000	0.00	0.00	0.00	4.18
195	196	2.753452	GTTGATCACCTAGACCAGACGA	59.247	50.000	0.00	0.00	0.00	4.20
196	197	2.644676	TGATCACCTAGACCAGACGAG	58.355	52.381	0.00	0.00	0.00	4.18
197	198	1.950909	GATCACCTAGACCAGACGAGG	59.049	57.143	0.00	0.00	38.36	4.63
198	199	0.697079	TCACCTAGACCAGACGAGGT	59.303	55.000	0.00	0.00	44.37	3.85
199	200	1.075050	TCACCTAGACCAGACGAGGTT	59.925	52.381	0.00	0.00	42.33	3.50
200	201	1.202582	CACCTAGACCAGACGAGGTTG	59.797	57.143	0.00	0.00	42.33	3.77
201	202	1.075050	ACCTAGACCAGACGAGGTTGA	59.925	52.381	0.00	0.00	41.70	3.18
202	203	1.746220	CCTAGACCAGACGAGGTTGAG	59.254	57.143	0.00	0.00	43.38	3.02
203	204	1.746220	CTAGACCAGACGAGGTTGAGG	59.254	57.143	0.00	0.00	43.38	3.86
204	205	0.112606	AGACCAGACGAGGTTGAGGA	59.887	55.000	0.00	0.00	43.38	3.71
205	206	0.966920	GACCAGACGAGGTTGAGGAA	59.033	55.000	0.00	0.00	43.38	3.36
206	207	1.343465	GACCAGACGAGGTTGAGGAAA	59.657	52.381	0.00	0.00	43.38	3.13
207	208	1.766496	ACCAGACGAGGTTGAGGAAAA	59.234	47.619	0.00	0.00	39.34	2.29
208	209	2.143925	CCAGACGAGGTTGAGGAAAAC	58.856	52.381	0.00	0.00	0.00	2.43
209	210	2.484770	CCAGACGAGGTTGAGGAAAACA	60.485	50.000	0.00	0.00	0.00	2.83
210	211	2.544267	CAGACGAGGTTGAGGAAAACAC	59.456	50.000	0.00	0.00	0.00	3.32
211	212	2.169769	AGACGAGGTTGAGGAAAACACA	59.830	45.455	0.00	0.00	0.00	3.72
212	213	2.544267	GACGAGGTTGAGGAAAACACAG	59.456	50.000	0.00	0.00	0.00	3.66
213	214	1.873591	CGAGGTTGAGGAAAACACAGG	59.126	52.381	0.00	0.00	0.00	4.00
214	215	2.745152	CGAGGTTGAGGAAAACACAGGT	60.745	50.000	0.00	0.00	0.00	4.00
215	216	2.618709	GAGGTTGAGGAAAACACAGGTG	59.381	50.000	0.00	0.00	0.00	4.00
216	217	1.067060	GGTTGAGGAAAACACAGGTGC	59.933	52.381	0.00	0.00	0.00	5.01
217	218	1.021202	TTGAGGAAAACACAGGTGCG	58.979	50.000	0.00	0.00	0.00	5.34
218	219	1.282875	GAGGAAAACACAGGTGCGC	59.717	57.895	0.00	0.00	0.00	6.09
219	220	2.130073	GAGGAAAACACAGGTGCGCC	62.130	60.000	8.71	8.71	0.00	6.53
221	222	1.733526	GAAAACACAGGTGCGCCTT	59.266	52.632	18.42	5.57	44.18	4.35
222	223	0.594796	GAAAACACAGGTGCGCCTTG	60.595	55.000	18.42	19.58	44.18	3.61
223	224	1.034838	AAAACACAGGTGCGCCTTGA	61.035	50.000	25.49	0.00	44.18	3.02
224	225	0.823356	AAACACAGGTGCGCCTTGAT	60.823	50.000	25.49	16.18	44.18	2.57
225	226	0.823356	AACACAGGTGCGCCTTGATT	60.823	50.000	25.49	14.86	44.18	2.57
226	227	0.823356	ACACAGGTGCGCCTTGATTT	60.823	50.000	25.49	5.43	44.18	2.17
227	228	1.164411	CACAGGTGCGCCTTGATTTA	58.836	50.000	18.42	0.00	44.18	1.40
228	229	1.745087	CACAGGTGCGCCTTGATTTAT	59.255	47.619	18.42	0.00	44.18	1.40
229	230	2.164219	CACAGGTGCGCCTTGATTTATT	59.836	45.455	18.42	0.00	44.18	1.40
230	231	2.825532	ACAGGTGCGCCTTGATTTATTT	59.174	40.909	18.42	0.00	44.18	1.40
231	232	3.258123	ACAGGTGCGCCTTGATTTATTTT	59.742	39.130	18.42	0.00	44.18	1.82
232	233	4.244862	CAGGTGCGCCTTGATTTATTTTT	58.755	39.130	18.42	0.00	44.18	1.94
255	256	8.533569	TTTTTGACCTCAGAAACCTCTTTATT	57.466	30.769	0.00	0.00	0.00	1.40
256	257	7.745620	TTTGACCTCAGAAACCTCTTTATTC	57.254	36.000	0.00	0.00	0.00	1.75
257	258	6.433847	TGACCTCAGAAACCTCTTTATTCA	57.566	37.500	0.00	0.00	0.00	2.57
258	259	6.837312	TGACCTCAGAAACCTCTTTATTCAA	58.163	36.000	0.00	0.00	0.00	2.69
259	260	7.461749	TGACCTCAGAAACCTCTTTATTCAAT	58.538	34.615	0.00	0.00	0.00	2.57
260	261	8.602424	TGACCTCAGAAACCTCTTTATTCAATA	58.398	33.333	0.00	0.00	0.00	1.90
261	262	9.103861	GACCTCAGAAACCTCTTTATTCAATAG	57.896	37.037	0.00	0.00	0.00	1.73
262	263	8.826765	ACCTCAGAAACCTCTTTATTCAATAGA	58.173	33.333	0.00	0.00	0.00	1.98
263	264	9.844257	CCTCAGAAACCTCTTTATTCAATAGAT	57.156	33.333	0.00	0.00	0.00	1.98
290	291	9.631257	AATAATGTTACATCATTCACCATGAGA	57.369	29.630	0.00	0.00	45.52	3.27
291	292	7.563888	AATGTTACATCATTCACCATGAGAG	57.436	36.000	0.00	0.00	45.52	3.20
292	293	6.298441	TGTTACATCATTCACCATGAGAGA	57.702	37.500	0.00	0.00	45.52	3.10
293	294	6.108687	TGTTACATCATTCACCATGAGAGAC	58.891	40.000	0.00	0.00	45.52	3.36
294	295	3.790091	ACATCATTCACCATGAGAGACG	58.210	45.455	0.00	0.00	45.52	4.18
295	296	2.299993	TCATTCACCATGAGAGACGC	57.700	50.000	0.00	0.00	36.94	5.19
296	297	1.134699	TCATTCACCATGAGAGACGCC	60.135	52.381	0.00	0.00	36.94	5.68
297	298	1.134580	CATTCACCATGAGAGACGCCT	60.135	52.381	0.00	0.00	34.31	5.52
298	299	0.976641	TTCACCATGAGAGACGCCTT	59.023	50.000	0.00	0.00	0.00	4.35
299	300	0.247460	TCACCATGAGAGACGCCTTG	59.753	55.000	0.00	0.00	0.00	3.61
300	301	0.247460	CACCATGAGAGACGCCTTGA	59.753	55.000	0.00	0.00	0.00	3.02
301	302	1.134580	CACCATGAGAGACGCCTTGAT	60.135	52.381	0.00	0.00	0.00	2.57
302	303	1.134580	ACCATGAGAGACGCCTTGATG	60.135	52.381	0.00	0.00	0.00	3.07
303	304	1.579698	CATGAGAGACGCCTTGATGG	58.420	55.000	0.00	0.00	39.35	3.51
304	305	1.134580	CATGAGAGACGCCTTGATGGT	60.135	52.381	0.00	0.00	38.35	3.55
305	306	0.976641	TGAGAGACGCCTTGATGGTT	59.023	50.000	0.00	0.00	38.35	3.67
306	307	1.338105	TGAGAGACGCCTTGATGGTTG	60.338	52.381	0.00	0.00	38.35	3.77
307	308	0.687354	AGAGACGCCTTGATGGTTGT	59.313	50.000	0.00	0.00	38.35	3.32
308	309	0.798776	GAGACGCCTTGATGGTTGTG	59.201	55.000	0.00	0.00	38.35	3.33
309	310	0.396435	AGACGCCTTGATGGTTGTGA	59.604	50.000	0.00	0.00	38.35	3.58
310	311	0.798776	GACGCCTTGATGGTTGTGAG	59.201	55.000	0.00	0.00	38.35	3.51
311	312	0.396435	ACGCCTTGATGGTTGTGAGA	59.604	50.000	0.00	0.00	38.35	3.27
312	313	1.202758	ACGCCTTGATGGTTGTGAGAA	60.203	47.619	0.00	0.00	38.35	2.87
313	314	1.466167	CGCCTTGATGGTTGTGAGAAG	59.534	52.381	0.00	0.00	38.35	2.85
314	315	2.508526	GCCTTGATGGTTGTGAGAAGT	58.491	47.619	0.00	0.00	38.35	3.01
315	316	2.227388	GCCTTGATGGTTGTGAGAAGTG	59.773	50.000	0.00	0.00	38.35	3.16
316	317	2.816087	CCTTGATGGTTGTGAGAAGTGG	59.184	50.000	0.00	0.00	0.00	4.00
317	318	3.480470	CTTGATGGTTGTGAGAAGTGGT	58.520	45.455	0.00	0.00	0.00	4.16
318	319	3.126001	TGATGGTTGTGAGAAGTGGTC	57.874	47.619	0.00	0.00	0.00	4.02
319	320	2.069273	GATGGTTGTGAGAAGTGGTCG	58.931	52.381	0.00	0.00	0.00	4.79
320	321	1.116308	TGGTTGTGAGAAGTGGTCGA	58.884	50.000	0.00	0.00	0.00	4.20
321	322	1.691976	TGGTTGTGAGAAGTGGTCGAT	59.308	47.619	0.00	0.00	0.00	3.59
322	323	2.288825	TGGTTGTGAGAAGTGGTCGATC	60.289	50.000	0.00	0.00	0.00	3.69
323	324	2.028930	GGTTGTGAGAAGTGGTCGATCT	60.029	50.000	0.00	0.00	0.00	2.75
324	325	3.555168	GGTTGTGAGAAGTGGTCGATCTT	60.555	47.826	0.00	0.00	0.00	2.40
325	326	4.058817	GTTGTGAGAAGTGGTCGATCTTT	58.941	43.478	0.00	0.00	0.00	2.52
326	327	3.653344	TGTGAGAAGTGGTCGATCTTTG	58.347	45.455	0.00	0.00	0.00	2.77
327	328	3.320826	TGTGAGAAGTGGTCGATCTTTGA	59.679	43.478	0.00	0.00	0.00	2.69
328	329	4.202212	TGTGAGAAGTGGTCGATCTTTGAA	60.202	41.667	0.00	0.00	0.00	2.69
329	330	4.750098	GTGAGAAGTGGTCGATCTTTGAAA	59.250	41.667	0.00	0.00	0.00	2.69
330	331	5.236478	GTGAGAAGTGGTCGATCTTTGAAAA	59.764	40.000	0.00	0.00	0.00	2.29
331	332	5.466728	TGAGAAGTGGTCGATCTTTGAAAAG	59.533	40.000	0.00	0.00	37.36	2.27
344	345	6.995511	TCTTTGAAAAGAAAGGAGACGAAA	57.004	33.333	3.00	0.00	41.75	3.46
345	346	7.016361	TCTTTGAAAAGAAAGGAGACGAAAG	57.984	36.000	3.00	0.00	41.75	2.62
346	347	4.813296	TGAAAAGAAAGGAGACGAAAGC	57.187	40.909	0.00	0.00	0.00	3.51
347	348	3.564225	TGAAAAGAAAGGAGACGAAAGCC	59.436	43.478	0.00	0.00	0.00	4.35
348	349	1.797025	AAGAAAGGAGACGAAAGCCG	58.203	50.000	0.00	0.00	45.44	5.52
359	360	2.468532	CGAAAGCCGTCAAAACACTT	57.531	45.000	0.00	0.00	0.00	3.16
360	361	3.595709	CGAAAGCCGTCAAAACACTTA	57.404	42.857	0.00	0.00	0.00	2.24
361	362	4.141855	CGAAAGCCGTCAAAACACTTAT	57.858	40.909	0.00	0.00	0.00	1.73
362	363	4.533222	CGAAAGCCGTCAAAACACTTATT	58.467	39.130	0.00	0.00	0.00	1.40
363	364	4.973663	CGAAAGCCGTCAAAACACTTATTT	59.026	37.500	0.00	0.00	0.00	1.40
364	365	6.137415	CGAAAGCCGTCAAAACACTTATTTA	58.863	36.000	0.00	0.00	0.00	1.40
365	366	6.085849	CGAAAGCCGTCAAAACACTTATTTAC	59.914	38.462	0.00	0.00	0.00	2.01
366	367	6.628919	AAGCCGTCAAAACACTTATTTACT	57.371	33.333	0.00	0.00	0.00	2.24
367	368	6.237313	AGCCGTCAAAACACTTATTTACTC	57.763	37.500	0.00	0.00	0.00	2.59
368	369	5.077424	GCCGTCAAAACACTTATTTACTCG	58.923	41.667	0.00	0.00	0.00	4.18
369	370	5.333568	GCCGTCAAAACACTTATTTACTCGT	60.334	40.000	0.00	0.00	0.00	4.18
370	371	6.294363	CCGTCAAAACACTTATTTACTCGTC	58.706	40.000	0.00	0.00	0.00	4.20
371	372	6.145048	CCGTCAAAACACTTATTTACTCGTCT	59.855	38.462	0.00	0.00	0.00	4.18
372	373	7.306983	CCGTCAAAACACTTATTTACTCGTCTT	60.307	37.037	0.00	0.00	0.00	3.01
373	374	7.734726	CGTCAAAACACTTATTTACTCGTCTTC	59.265	37.037	0.00	0.00	0.00	2.87
374	375	8.545420	GTCAAAACACTTATTTACTCGTCTTCA	58.455	33.333	0.00	0.00	0.00	3.02
375	376	8.545420	TCAAAACACTTATTTACTCGTCTTCAC	58.455	33.333	0.00	0.00	0.00	3.18
376	377	8.548721	CAAAACACTTATTTACTCGTCTTCACT	58.451	33.333	0.00	0.00	0.00	3.41
377	378	7.870588	AACACTTATTTACTCGTCTTCACTC	57.129	36.000	0.00	0.00	0.00	3.51
378	379	6.978338	ACACTTATTTACTCGTCTTCACTCA	58.022	36.000	0.00	0.00	0.00	3.41
379	380	6.862090	ACACTTATTTACTCGTCTTCACTCAC	59.138	38.462	0.00	0.00	0.00	3.51
380	381	6.861572	CACTTATTTACTCGTCTTCACTCACA	59.138	38.462	0.00	0.00	0.00	3.58
381	382	7.542477	CACTTATTTACTCGTCTTCACTCACAT	59.458	37.037	0.00	0.00	0.00	3.21
382	383	8.737175	ACTTATTTACTCGTCTTCACTCACATA	58.263	33.333	0.00	0.00	0.00	2.29
383	384	9.737427	CTTATTTACTCGTCTTCACTCACATAT	57.263	33.333	0.00	0.00	0.00	1.78
385	386	7.812309	TTTACTCGTCTTCACTCACATATTG	57.188	36.000	0.00	0.00	0.00	1.90
386	387	4.748892	ACTCGTCTTCACTCACATATTGG	58.251	43.478	0.00	0.00	0.00	3.16
387	388	4.115516	CTCGTCTTCACTCACATATTGGG	58.884	47.826	0.00	0.00	0.00	4.12
388	389	2.609459	CGTCTTCACTCACATATTGGGC	59.391	50.000	0.00	0.00	0.00	5.36
389	390	3.679917	CGTCTTCACTCACATATTGGGCT	60.680	47.826	0.00	0.00	0.00	5.19
390	391	4.265073	GTCTTCACTCACATATTGGGCTT	58.735	43.478	0.00	0.00	0.00	4.35
391	392	4.333926	GTCTTCACTCACATATTGGGCTTC	59.666	45.833	0.00	0.00	0.00	3.86
392	393	4.225942	TCTTCACTCACATATTGGGCTTCT	59.774	41.667	0.00	0.00	0.00	2.85
393	394	4.574674	TCACTCACATATTGGGCTTCTT	57.425	40.909	0.00	0.00	0.00	2.52
394	395	4.517285	TCACTCACATATTGGGCTTCTTC	58.483	43.478	0.00	0.00	0.00	2.87
395	396	3.310774	CACTCACATATTGGGCTTCTTCG	59.689	47.826	0.00	0.00	0.00	3.79
396	397	3.197766	ACTCACATATTGGGCTTCTTCGA	59.802	43.478	0.00	0.00	0.00	3.71
397	398	3.797039	TCACATATTGGGCTTCTTCGAG	58.203	45.455	0.00	0.00	0.00	4.04
398	399	3.197766	TCACATATTGGGCTTCTTCGAGT	59.802	43.478	0.00	0.00	0.00	4.18
399	400	3.310774	CACATATTGGGCTTCTTCGAGTG	59.689	47.826	0.00	0.00	0.00	3.51
400	401	2.024176	TATTGGGCTTCTTCGAGTGC	57.976	50.000	0.00	0.00	0.00	4.40
401	402	0.036732	ATTGGGCTTCTTCGAGTGCA	59.963	50.000	0.00	0.00	0.00	4.57
402	403	0.179032	TTGGGCTTCTTCGAGTGCAA	60.179	50.000	0.00	0.00	0.00	4.08
403	404	0.179032	TGGGCTTCTTCGAGTGCAAA	60.179	50.000	0.00	0.00	0.00	3.68
404	405	0.951558	GGGCTTCTTCGAGTGCAAAA	59.048	50.000	0.00	0.00	0.00	2.44
405	406	1.336755	GGGCTTCTTCGAGTGCAAAAA	59.663	47.619	0.00	0.00	0.00	1.94
406	407	2.605580	GGGCTTCTTCGAGTGCAAAAAG	60.606	50.000	0.00	0.00	0.00	2.27
407	408	2.605580	GGCTTCTTCGAGTGCAAAAAGG	60.606	50.000	0.00	0.00	0.00	3.11
408	409	2.654987	CTTCTTCGAGTGCAAAAAGGC	58.345	47.619	0.00	0.00	0.00	4.35
409	410	0.951558	TCTTCGAGTGCAAAAAGGCC	59.048	50.000	0.00	0.00	0.00	5.19
410	411	0.039165	CTTCGAGTGCAAAAAGGCCC	60.039	55.000	0.00	0.00	0.00	5.80
411	412	0.753479	TTCGAGTGCAAAAAGGCCCA	60.753	50.000	0.00	0.00	0.00	5.36
412	413	0.539438	TCGAGTGCAAAAAGGCCCAT	60.539	50.000	0.00	0.00	0.00	4.00
413	414	0.318120	CGAGTGCAAAAAGGCCCATT	59.682	50.000	0.00	0.00	0.00	3.16
414	415	1.799544	GAGTGCAAAAAGGCCCATTG	58.200	50.000	0.00	3.47	0.00	2.82
415	416	0.397564	AGTGCAAAAAGGCCCATTGG	59.602	50.000	0.00	0.00	0.00	3.16
426	427	3.682885	CCATTGGCCACGCAGCAA	61.683	61.111	3.88	0.00	0.00	3.91
427	428	2.339348	CATTGGCCACGCAGCAAA	59.661	55.556	3.88	0.00	0.00	3.68
428	429	1.300775	CATTGGCCACGCAGCAAAA	60.301	52.632	3.88	0.00	0.00	2.44
429	430	1.005867	ATTGGCCACGCAGCAAAAG	60.006	52.632	3.88	0.00	0.00	2.27
430	431	3.788616	TTGGCCACGCAGCAAAAGC	62.789	57.895	3.88	0.00	0.00	3.51
432	433	3.982241	GCCACGCAGCAAAAGCCT	61.982	61.111	0.00	0.00	0.00	4.58
433	434	2.049802	CCACGCAGCAAAAGCCTG	60.050	61.111	0.00	0.00	0.00	4.85
434	435	2.723746	CACGCAGCAAAAGCCTGT	59.276	55.556	0.00	0.00	32.93	4.00
435	436	1.370900	CACGCAGCAAAAGCCTGTC	60.371	57.895	0.00	0.00	32.93	3.51
436	437	2.127118	CGCAGCAAAAGCCTGTCG	60.127	61.111	0.00	0.00	32.93	4.35
437	438	2.606961	CGCAGCAAAAGCCTGTCGA	61.607	57.895	0.00	0.00	34.28	4.20
438	439	1.208614	GCAGCAAAAGCCTGTCGAG	59.791	57.895	0.00	0.00	32.93	4.04
439	440	1.510480	GCAGCAAAAGCCTGTCGAGT	61.510	55.000	0.00	0.00	32.93	4.18
440	441	0.514691	CAGCAAAAGCCTGTCGAGTC	59.485	55.000	0.00	0.00	0.00	3.36
441	442	0.394565	AGCAAAAGCCTGTCGAGTCT	59.605	50.000	0.00	0.00	0.00	3.24
442	443	0.793250	GCAAAAGCCTGTCGAGTCTC	59.207	55.000	0.00	0.00	0.00	3.36
443	444	1.606737	GCAAAAGCCTGTCGAGTCTCT	60.607	52.381	0.00	0.00	0.00	3.10
444	445	2.333014	CAAAAGCCTGTCGAGTCTCTC	58.667	52.381	0.00	0.00	0.00	3.20
445	446	0.892063	AAAGCCTGTCGAGTCTCTCC	59.108	55.000	0.00	0.00	0.00	3.71
446	447	0.039035	AAGCCTGTCGAGTCTCTCCT	59.961	55.000	0.00	0.00	0.00	3.69
447	448	0.913205	AGCCTGTCGAGTCTCTCCTA	59.087	55.000	0.00	0.00	0.00	2.94
448	449	1.018910	GCCTGTCGAGTCTCTCCTAC	58.981	60.000	0.00	0.00	0.00	3.18
449	450	1.670791	CCTGTCGAGTCTCTCCTACC	58.329	60.000	0.00	0.00	0.00	3.18
450	451	1.065345	CCTGTCGAGTCTCTCCTACCA	60.065	57.143	0.00	0.00	0.00	3.25
451	452	2.618302	CCTGTCGAGTCTCTCCTACCAA	60.618	54.545	0.00	0.00	0.00	3.67
452	453	2.420722	CTGTCGAGTCTCTCCTACCAAC	59.579	54.545	0.00	0.00	0.00	3.77
453	454	1.744522	GTCGAGTCTCTCCTACCAACC	59.255	57.143	0.00	0.00	0.00	3.77
454	455	0.733729	CGAGTCTCTCCTACCAACCG	59.266	60.000	0.00	0.00	0.00	4.44
455	456	0.456628	GAGTCTCTCCTACCAACCGC	59.543	60.000	0.00	0.00	0.00	5.68
456	457	0.971447	AGTCTCTCCTACCAACCGCC	60.971	60.000	0.00	0.00	0.00	6.13
457	458	2.050350	TCTCTCCTACCAACCGCCG	61.050	63.158	0.00	0.00	0.00	6.46
458	459	3.072468	TCTCCTACCAACCGCCGG	61.072	66.667	0.00	0.00	0.00	6.13
459	460	4.832608	CTCCTACCAACCGCCGGC	62.833	72.222	19.07	19.07	0.00	6.13
470	471	4.286320	CGCCGGCGCTCCTTCTAT	62.286	66.667	38.48	0.00	0.00	1.98
471	472	2.109181	GCCGGCGCTCCTTCTATT	59.891	61.111	12.58	0.00	0.00	1.73
472	473	1.956678	GCCGGCGCTCCTTCTATTC	60.957	63.158	12.58	0.00	0.00	1.75
473	474	1.742768	CCGGCGCTCCTTCTATTCT	59.257	57.895	7.64	0.00	0.00	2.40
474	475	0.319125	CCGGCGCTCCTTCTATTCTC	60.319	60.000	7.64	0.00	0.00	2.87
475	476	0.319125	CGGCGCTCCTTCTATTCTCC	60.319	60.000	7.64	0.00	0.00	3.71
476	477	0.753262	GGCGCTCCTTCTATTCTCCA	59.247	55.000	7.64	0.00	0.00	3.86
477	478	1.139058	GGCGCTCCTTCTATTCTCCAA	59.861	52.381	7.64	0.00	0.00	3.53
478	479	2.224402	GGCGCTCCTTCTATTCTCCAAT	60.224	50.000	7.64	0.00	0.00	3.16
479	480	3.063485	GCGCTCCTTCTATTCTCCAATC	58.937	50.000	0.00	0.00	0.00	2.67
480	481	3.658709	CGCTCCTTCTATTCTCCAATCC	58.341	50.000	0.00	0.00	0.00	3.01
481	482	3.556004	CGCTCCTTCTATTCTCCAATCCC	60.556	52.174	0.00	0.00	0.00	3.85
482	483	3.392616	GCTCCTTCTATTCTCCAATCCCA	59.607	47.826	0.00	0.00	0.00	4.37
483	484	4.042684	GCTCCTTCTATTCTCCAATCCCAT	59.957	45.833	0.00	0.00	0.00	4.00
484	485	5.802821	GCTCCTTCTATTCTCCAATCCCATC	60.803	48.000	0.00	0.00	0.00	3.51
485	486	4.284490	TCCTTCTATTCTCCAATCCCATCG	59.716	45.833	0.00	0.00	0.00	3.84
486	487	3.685139	TCTATTCTCCAATCCCATCGC	57.315	47.619	0.00	0.00	0.00	4.58
487	488	2.303022	TCTATTCTCCAATCCCATCGCC	59.697	50.000	0.00	0.00	0.00	5.54
488	489	0.846015	ATTCTCCAATCCCATCGCCA	59.154	50.000	0.00	0.00	0.00	5.69
489	490	0.107214	TTCTCCAATCCCATCGCCAC	60.107	55.000	0.00	0.00	0.00	5.01
490	491	1.526917	CTCCAATCCCATCGCCACC	60.527	63.158	0.00	0.00	0.00	4.61
491	492	2.901840	CCAATCCCATCGCCACCG	60.902	66.667	0.00	0.00	0.00	4.94
492	493	3.585990	CAATCCCATCGCCACCGC	61.586	66.667	0.00	0.00	0.00	5.68
493	494	4.875713	AATCCCATCGCCACCGCC	62.876	66.667	0.00	0.00	0.00	6.13
508	509	4.388499	GCCGCTCGTTCCCCAAGA	62.388	66.667	0.00	0.00	0.00	3.02
509	510	2.434359	CCGCTCGTTCCCCAAGAC	60.434	66.667	0.00	0.00	0.00	3.01
510	511	2.657237	CGCTCGTTCCCCAAGACT	59.343	61.111	0.00	0.00	0.00	3.24
511	512	1.601419	CCGCTCGTTCCCCAAGACTA	61.601	60.000	0.00	0.00	0.00	2.59
512	513	0.458025	CGCTCGTTCCCCAAGACTAC	60.458	60.000	0.00	0.00	0.00	2.73
513	514	0.108281	GCTCGTTCCCCAAGACTACC	60.108	60.000	0.00	0.00	0.00	3.18
514	515	1.263356	CTCGTTCCCCAAGACTACCA	58.737	55.000	0.00	0.00	0.00	3.25
519	520	0.901580	TCCCCAAGACTACCACGGTC	60.902	60.000	0.00	0.00	0.00	4.79
644	663	3.706373	ATCCAAGCCAGACGCCGT	61.706	61.111	0.00	0.00	38.78	5.68
645	664	3.958147	ATCCAAGCCAGACGCCGTG	62.958	63.158	0.00	0.00	38.78	4.94
648	667	4.626081	AAGCCAGACGCCGTGCTT	62.626	61.111	7.39	7.39	39.12	3.91
653	672	4.626081	AGACGCCGTGCTTGCCTT	62.626	61.111	0.00	0.00	0.00	4.35
654	673	4.090057	GACGCCGTGCTTGCCTTC	62.090	66.667	0.00	0.00	0.00	3.46
657	676	3.435186	GCCGTGCTTGCCTTCCTC	61.435	66.667	0.00	0.00	0.00	3.71
658	677	3.121030	CCGTGCTTGCCTTCCTCG	61.121	66.667	0.00	0.00	0.00	4.63
659	678	3.793144	CGTGCTTGCCTTCCTCGC	61.793	66.667	0.00	0.00	0.00	5.03
660	679	3.435186	GTGCTTGCCTTCCTCGCC	61.435	66.667	0.00	0.00	0.00	5.54
728	747	1.377725	CCAAGTTCCTCTGCGCCAT	60.378	57.895	4.18	0.00	0.00	4.40
732	751	1.741770	GTTCCTCTGCGCCATCGTT	60.742	57.895	4.18	0.00	38.14	3.85
952	998	1.754803	AGCGGAATGTCGGATTACTGA	59.245	47.619	0.00	0.00	0.00	3.41
970	1016	0.037232	GAAGGAGTGCACGCTAGGTT	60.037	55.000	20.23	8.82	0.00	3.50
1097	1143	2.513204	CTCTGGGATGTGCAGGCG	60.513	66.667	0.00	0.00	0.00	5.52
1212	1258	1.588082	CATTGCTGTGTCCAAGGGC	59.412	57.895	0.00	0.00	0.00	5.19
1573	1755	6.758254	ACCAAGAACAGGGTATTGATTTTTG	58.242	36.000	0.00	0.00	35.09	2.44
1663	1845	3.190874	GTCTAACCAGATGTGTAGCTGC	58.809	50.000	0.00	0.00	38.98	5.25
1670	1852	2.035193	CAGATGTGTAGCTGCGGTATCT	59.965	50.000	0.00	2.94	33.01	1.98
1681	1863	3.485877	GCTGCGGTATCTCATTTGTCAAC	60.486	47.826	0.00	0.00	0.00	3.18
1715	1897	5.559148	AATAGGGATGCTCCTTCTGTTAG	57.441	43.478	0.00	0.00	38.30	2.34
1770	1952	4.214971	CAGCTTGCCTTATAGTATGCCTTG	59.785	45.833	0.00	0.00	0.00	3.61
1776	1958	4.636206	GCCTTATAGTATGCCTTGTATGCC	59.364	45.833	0.00	0.00	0.00	4.40
1781	1963	2.368548	AGTATGCCTTGTATGCCGATCA	59.631	45.455	0.00	0.00	0.00	2.92
1786	1968	4.203226	TGCCTTGTATGCCGATCAATTTA	58.797	39.130	0.00	0.00	0.00	1.40
1829	2011	5.600069	TGTAGAGACCACATTGCTCTCATAT	59.400	40.000	0.00	0.00	39.54	1.78
1932	2115	4.376340	CCATCCATTGGCAGTTTACTTC	57.624	45.455	0.00	0.00	39.09	3.01
2000	3399	2.293170	GCCTCCAGGTGCTTTATCTTC	58.707	52.381	0.00	0.00	37.57	2.87
2003	3402	3.274288	CTCCAGGTGCTTTATCTTCCAC	58.726	50.000	0.00	0.00	0.00	4.02
2031	3437	3.056821	GGTTAGGTTTTGGATGGCTCAAC	60.057	47.826	0.00	0.00	0.00	3.18
2056	3462	4.332819	GCCGTAATTAATGCACTCTTCTGT	59.667	41.667	0.00	0.00	0.00	3.41
2110	3516	0.704076	TAATGAGCAGGGTTGGGCTT	59.296	50.000	0.00	0.00	41.22	4.35
2196	3604	4.081420	CCCACAGCTGAAGAGTATTACAGT	60.081	45.833	23.35	0.00	33.57	3.55
2206	3614	8.256611	TGAAGAGTATTACAGTCTGCATTTTC	57.743	34.615	0.00	0.00	37.34	2.29
2212	3620	8.267894	AGTATTACAGTCTGCATTTTCATAGGT	58.732	33.333	0.00	0.00	0.00	3.08
2235	3646	7.013369	AGGTGAGATAAATAATTCGCCCTTTTC	59.987	37.037	0.00	0.00	40.29	2.29
2244	3655	0.881118	TCGCCCTTTTCTGCATGTTC	59.119	50.000	0.00	0.00	0.00	3.18
2245	3656	0.597568	CGCCCTTTTCTGCATGTTCA	59.402	50.000	0.00	0.00	0.00	3.18
2255	3666	1.749063	CTGCATGTTCATGACAGCCAT	59.251	47.619	15.74	0.00	42.62	4.40
2278	3689	2.045524	ACCATCTAGGGACATCTGCTG	58.954	52.381	0.00	0.00	43.89	4.41
2300	3711	7.011016	TGCTGTAGGTGATTATAATTGTTGTCG	59.989	37.037	0.00	0.00	0.00	4.35
2315	3726	1.855295	TGTCGTAGGTCCTTATGCCA	58.145	50.000	0.00	0.00	0.00	4.92
2335	3746	3.004629	CCACAAAGCTGCTGTTGTTCATA	59.995	43.478	20.06	0.00	35.81	2.15
2339	3750	4.494350	AAGCTGCTGTTGTTCATAGTTG	57.506	40.909	1.35	0.00	0.00	3.16
2344	3756	3.957497	TGCTGTTGTTCATAGTTGGGTTT	59.043	39.130	0.00	0.00	0.00	3.27
2347	3759	5.451242	GCTGTTGTTCATAGTTGGGTTTCAA	60.451	40.000	0.00	0.00	0.00	2.69
2350	3762	8.239038	TGTTGTTCATAGTTGGGTTTCAAATA	57.761	30.769	0.00	0.00	39.73	1.40
2379	3791	4.565028	GCATGGATGGATATGAGAAGCTGA	60.565	45.833	0.00	0.00	0.00	4.26
2407	3820	8.889717	TGTTTTGTTTGGTTTCACTGTTTTTAA	58.110	25.926	0.00	0.00	0.00	1.52
2411	3824	9.442047	TTGTTTGGTTTCACTGTTTTTAATGAT	57.558	25.926	0.00	0.00	0.00	2.45
2482	3895	1.813513	AACATTCCCTGAGTTCTGCG	58.186	50.000	0.00	0.00	0.00	5.18
2525	3938	6.413235	GCGCAGATTCAGTATTGAAGATTTTC	59.587	38.462	0.30	0.00	45.89	2.29
2527	3940	7.199078	GCAGATTCAGTATTGAAGATTTTCCC	58.801	38.462	6.81	0.00	45.89	3.97
2531	3944	7.687941	TTCAGTATTGAAGATTTTCCCTGAC	57.312	36.000	0.00	0.00	38.37	3.51
2535	3948	1.004277	TGAAGATTTTCCCTGACCCCG	59.996	52.381	0.00	0.00	32.09	5.73

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	6.343716	TCTAACCAAACACATCCGTAGTAA	57.656	37.500	0.00	0.00	0.00	2.24
1	2	5.981088	TCTAACCAAACACATCCGTAGTA	57.019	39.130	0.00	0.00	0.00	1.82
2	3	4.877378	TCTAACCAAACACATCCGTAGT	57.123	40.909	0.00	0.00	0.00	2.73
3	4	4.570772	CCATCTAACCAAACACATCCGTAG	59.429	45.833	0.00	0.00	0.00	3.51
4	5	4.223255	TCCATCTAACCAAACACATCCGTA	59.777	41.667	0.00	0.00	0.00	4.02
5	6	3.008594	TCCATCTAACCAAACACATCCGT	59.991	43.478	0.00	0.00	0.00	4.69
6	7	3.374058	GTCCATCTAACCAAACACATCCG	59.626	47.826	0.00	0.00	0.00	4.18
7	8	4.331968	TGTCCATCTAACCAAACACATCC	58.668	43.478	0.00	0.00	0.00	3.51
8	9	6.324819	CAATGTCCATCTAACCAAACACATC	58.675	40.000	0.00	0.00	0.00	3.06
9	10	5.336690	GCAATGTCCATCTAACCAAACACAT	60.337	40.000	0.00	0.00	0.00	3.21
10	11	4.022416	GCAATGTCCATCTAACCAAACACA	60.022	41.667	0.00	0.00	0.00	3.72
11	12	4.218417	AGCAATGTCCATCTAACCAAACAC	59.782	41.667	0.00	0.00	0.00	3.32
12	13	4.406456	AGCAATGTCCATCTAACCAAACA	58.594	39.130	0.00	0.00	0.00	2.83
13	14	5.880332	TCTAGCAATGTCCATCTAACCAAAC	59.120	40.000	0.00	0.00	0.00	2.93
14	15	6.061022	TCTAGCAATGTCCATCTAACCAAA	57.939	37.500	0.00	0.00	0.00	3.28
15	16	5.692115	TCTAGCAATGTCCATCTAACCAA	57.308	39.130	0.00	0.00	0.00	3.67
16	17	5.692115	TTCTAGCAATGTCCATCTAACCA	57.308	39.130	0.00	0.00	0.00	3.67
17	18	6.291377	TCATTCTAGCAATGTCCATCTAACC	58.709	40.000	11.96	0.00	0.00	2.85
18	19	7.792374	TTCATTCTAGCAATGTCCATCTAAC	57.208	36.000	11.96	0.00	0.00	2.34
20	21	9.662947	CATATTCATTCTAGCAATGTCCATCTA	57.337	33.333	11.96	0.00	0.00	1.98
21	22	7.610692	CCATATTCATTCTAGCAATGTCCATCT	59.389	37.037	11.96	0.00	0.00	2.90
22	23	7.148120	CCCATATTCATTCTAGCAATGTCCATC	60.148	40.741	11.96	0.00	0.00	3.51
23	24	6.662234	CCCATATTCATTCTAGCAATGTCCAT	59.338	38.462	11.96	7.71	0.00	3.41
24	25	6.005823	CCCATATTCATTCTAGCAATGTCCA	58.994	40.000	11.96	2.90	0.00	4.02
25	26	5.105997	GCCCATATTCATTCTAGCAATGTCC	60.106	44.000	11.96	0.00	0.00	4.02
26	27	5.474532	TGCCCATATTCATTCTAGCAATGTC	59.525	40.000	11.96	0.00	0.00	3.06
27	28	5.387788	TGCCCATATTCATTCTAGCAATGT	58.612	37.500	11.96	1.55	0.00	2.71
28	29	5.970317	TGCCCATATTCATTCTAGCAATG	57.030	39.130	7.99	7.99	0.00	2.82
29	30	5.655532	GGATGCCCATATTCATTCTAGCAAT	59.344	40.000	0.00	0.00	31.99	3.56
30	31	5.012239	GGATGCCCATATTCATTCTAGCAA	58.988	41.667	0.00	0.00	31.99	3.91
31	32	4.568380	GGGATGCCCATATTCATTCTAGCA	60.568	45.833	0.00	0.00	44.65	3.49
32	33	3.950395	GGGATGCCCATATTCATTCTAGC	59.050	47.826	0.00	0.00	44.65	3.42
46	47	0.820871	CTAGCTCGATAGGGATGCCC	59.179	60.000	0.00	0.00	45.90	5.36
47	48	1.840737	TCTAGCTCGATAGGGATGCC	58.159	55.000	0.00	0.00	41.23	4.40
48	49	4.829064	CTATCTAGCTCGATAGGGATGC	57.171	50.000	21.93	0.00	41.23	3.91
54	55	5.931294	TGGTATCCCTATCTAGCTCGATAG	58.069	45.833	22.47	22.47	41.52	2.08
55	56	5.970501	TGGTATCCCTATCTAGCTCGATA	57.029	43.478	7.65	7.65	0.00	2.92
56	57	4.864483	TGGTATCCCTATCTAGCTCGAT	57.136	45.455	5.98	5.98	0.00	3.59
57	58	4.018324	ACATGGTATCCCTATCTAGCTCGA	60.018	45.833	0.00	0.00	0.00	4.04
58	59	4.274147	ACATGGTATCCCTATCTAGCTCG	58.726	47.826	0.00	0.00	0.00	5.03
59	60	6.322712	CCTTACATGGTATCCCTATCTAGCTC	59.677	46.154	0.00	0.00	0.00	4.09
60	61	6.010650	TCCTTACATGGTATCCCTATCTAGCT	60.011	42.308	0.00	0.00	0.00	3.32
61	62	6.195700	TCCTTACATGGTATCCCTATCTAGC	58.804	44.000	0.00	0.00	0.00	3.42
62	63	8.061920	TCATCCTTACATGGTATCCCTATCTAG	58.938	40.741	0.00	0.00	0.00	2.43
63	64	7.950803	TCATCCTTACATGGTATCCCTATCTA	58.049	38.462	0.00	0.00	0.00	1.98
64	65	6.815880	TCATCCTTACATGGTATCCCTATCT	58.184	40.000	0.00	0.00	0.00	1.98
65	66	6.670027	ACTCATCCTTACATGGTATCCCTATC	59.330	42.308	0.00	0.00	0.00	2.08
66	67	6.575411	ACTCATCCTTACATGGTATCCCTAT	58.425	40.000	0.00	0.00	0.00	2.57
67	68	5.977533	ACTCATCCTTACATGGTATCCCTA	58.022	41.667	0.00	0.00	0.00	3.53
68	69	4.832492	ACTCATCCTTACATGGTATCCCT	58.168	43.478	0.00	0.00	0.00	4.20
69	70	4.841246	AGACTCATCCTTACATGGTATCCC	59.159	45.833	0.00	0.00	0.00	3.85
70	71	5.788450	CAGACTCATCCTTACATGGTATCC	58.212	45.833	0.00	0.00	0.00	2.59
71	72	5.221521	TGCAGACTCATCCTTACATGGTATC	60.222	44.000	0.00	0.00	0.00	2.24
72	73	4.655649	TGCAGACTCATCCTTACATGGTAT	59.344	41.667	0.00	0.00	0.00	2.73
73	74	4.030216	TGCAGACTCATCCTTACATGGTA	58.970	43.478	0.00	0.00	0.00	3.25
74	75	2.840038	TGCAGACTCATCCTTACATGGT	59.160	45.455	0.00	0.00	0.00	3.55
75	76	3.464907	CTGCAGACTCATCCTTACATGG	58.535	50.000	8.42	0.00	0.00	3.66
76	77	2.871022	GCTGCAGACTCATCCTTACATG	59.129	50.000	20.43	0.00	0.00	3.21
77	78	2.158842	GGCTGCAGACTCATCCTTACAT	60.159	50.000	20.43	0.00	0.00	2.29
78	79	1.208052	GGCTGCAGACTCATCCTTACA	59.792	52.381	20.43	0.00	0.00	2.41
79	80	1.804372	CGGCTGCAGACTCATCCTTAC	60.804	57.143	20.43	0.00	0.00	2.34
80	81	0.461548	CGGCTGCAGACTCATCCTTA	59.538	55.000	20.43	0.00	0.00	2.69
81	82	1.220206	CGGCTGCAGACTCATCCTT	59.780	57.895	20.43	0.00	0.00	3.36
82	83	2.898738	CGGCTGCAGACTCATCCT	59.101	61.111	20.43	0.00	0.00	3.24
83	84	2.894387	GCGGCTGCAGACTCATCC	60.894	66.667	20.43	6.83	42.15	3.51
93	94	3.127533	CAAGGGTAGTGCGGCTGC	61.128	66.667	11.65	11.65	43.20	5.25
94	95	3.127533	GCAAGGGTAGTGCGGCTG	61.128	66.667	0.00	0.00	31.20	4.85
95	96	2.876368	GATGCAAGGGTAGTGCGGCT	62.876	60.000	0.00	0.00	45.27	5.52
96	97	2.438434	ATGCAAGGGTAGTGCGGC	60.438	61.111	0.00	0.00	45.27	6.53
97	98	0.464036	TAGATGCAAGGGTAGTGCGG	59.536	55.000	0.00	0.00	45.27	5.69
98	99	1.571919	GTAGATGCAAGGGTAGTGCG	58.428	55.000	0.00	0.00	45.27	5.34
99	100	1.486726	AGGTAGATGCAAGGGTAGTGC	59.513	52.381	0.00	0.00	42.55	4.40
100	101	2.103263	GGAGGTAGATGCAAGGGTAGTG	59.897	54.545	0.00	0.00	0.00	2.74
101	102	2.399580	GGAGGTAGATGCAAGGGTAGT	58.600	52.381	0.00	0.00	0.00	2.73
102	103	1.694696	GGGAGGTAGATGCAAGGGTAG	59.305	57.143	0.00	0.00	0.00	3.18
103	104	1.802553	GGGAGGTAGATGCAAGGGTA	58.197	55.000	0.00	0.00	0.00	3.69
104	105	1.338136	CGGGAGGTAGATGCAAGGGT	61.338	60.000	0.00	0.00	0.00	4.34
105	106	1.338136	ACGGGAGGTAGATGCAAGGG	61.338	60.000	0.00	0.00	0.00	3.95
106	107	0.179073	CACGGGAGGTAGATGCAAGG	60.179	60.000	0.00	0.00	0.00	3.61
107	108	0.811616	GCACGGGAGGTAGATGCAAG	60.812	60.000	0.00	0.00	36.30	4.01
108	109	1.220749	GCACGGGAGGTAGATGCAA	59.779	57.895	0.00	0.00	36.30	4.08
109	110	0.396556	TAGCACGGGAGGTAGATGCA	60.397	55.000	0.00	0.00	38.79	3.96
110	111	0.032267	GTAGCACGGGAGGTAGATGC	59.968	60.000	0.00	0.00	36.52	3.91
111	112	0.674534	GGTAGCACGGGAGGTAGATG	59.325	60.000	0.00	0.00	0.00	2.90
112	113	0.469518	GGGTAGCACGGGAGGTAGAT	60.470	60.000	0.00	0.00	0.00	1.98
113	114	1.076485	GGGTAGCACGGGAGGTAGA	60.076	63.158	0.00	0.00	0.00	2.59
114	115	2.132352	GGGGTAGCACGGGAGGTAG	61.132	68.421	0.00	0.00	0.00	3.18
115	116	1.288508	TAGGGGTAGCACGGGAGGTA	61.289	60.000	0.00	0.00	0.00	3.08
116	117	2.629498	TAGGGGTAGCACGGGAGGT	61.629	63.158	0.00	0.00	0.00	3.85
117	118	2.132352	GTAGGGGTAGCACGGGAGG	61.132	68.421	0.00	0.00	0.00	4.30
118	119	0.759436	ATGTAGGGGTAGCACGGGAG	60.759	60.000	0.00	0.00	0.00	4.30
119	120	0.757935	GATGTAGGGGTAGCACGGGA	60.758	60.000	0.00	0.00	0.00	5.14
120	121	0.759436	AGATGTAGGGGTAGCACGGG	60.759	60.000	0.00	0.00	0.00	5.28
121	122	1.612463	GTAGATGTAGGGGTAGCACGG	59.388	57.143	0.00	0.00	0.00	4.94
122	123	1.612463	GGTAGATGTAGGGGTAGCACG	59.388	57.143	0.00	0.00	0.00	5.34
123	124	2.960163	AGGTAGATGTAGGGGTAGCAC	58.040	52.381	0.00	0.00	0.00	4.40
124	125	3.725797	AGTAGGTAGATGTAGGGGTAGCA	59.274	47.826	0.00	0.00	0.00	3.49
125	126	4.080687	CAGTAGGTAGATGTAGGGGTAGC	58.919	52.174	0.00	0.00	0.00	3.58
126	127	4.080687	GCAGTAGGTAGATGTAGGGGTAG	58.919	52.174	0.00	0.00	0.00	3.18
127	128	3.497405	CGCAGTAGGTAGATGTAGGGGTA	60.497	52.174	0.00	0.00	0.00	3.69
128	129	2.752154	CGCAGTAGGTAGATGTAGGGGT	60.752	54.545	0.00	0.00	0.00	4.95
129	130	1.887198	CGCAGTAGGTAGATGTAGGGG	59.113	57.143	0.00	0.00	0.00	4.79
130	131	1.269998	GCGCAGTAGGTAGATGTAGGG	59.730	57.143	0.30	0.00	0.00	3.53
131	132	1.269998	GGCGCAGTAGGTAGATGTAGG	59.730	57.143	10.83	0.00	0.00	3.18
132	133	1.954382	TGGCGCAGTAGGTAGATGTAG	59.046	52.381	10.83	0.00	0.00	2.74
133	134	1.679680	GTGGCGCAGTAGGTAGATGTA	59.320	52.381	10.83	0.00	0.00	2.29
134	135	0.460311	GTGGCGCAGTAGGTAGATGT	59.540	55.000	10.83	0.00	0.00	3.06
135	136	0.595053	CGTGGCGCAGTAGGTAGATG	60.595	60.000	10.83	0.00	0.00	2.90
136	137	1.734137	CGTGGCGCAGTAGGTAGAT	59.266	57.895	10.83	0.00	0.00	1.98
137	138	3.193757	CGTGGCGCAGTAGGTAGA	58.806	61.111	10.83	0.00	0.00	2.59
158	159	2.688507	TCAACAACTAGCAGCTGTAGC	58.311	47.619	16.64	0.00	42.49	3.58
159	160	4.328440	GTGATCAACAACTAGCAGCTGTAG	59.672	45.833	16.64	16.76	0.00	2.74
160	161	4.245660	GTGATCAACAACTAGCAGCTGTA	58.754	43.478	16.64	5.76	0.00	2.74
161	162	3.070018	GTGATCAACAACTAGCAGCTGT	58.930	45.455	16.64	4.79	0.00	4.40
162	163	2.417933	GGTGATCAACAACTAGCAGCTG	59.582	50.000	10.11	10.11	32.72	4.24
163	164	2.304180	AGGTGATCAACAACTAGCAGCT	59.696	45.455	14.46	0.00	45.63	4.24
164	165	2.704572	AGGTGATCAACAACTAGCAGC	58.295	47.619	14.46	0.00	45.63	5.25
169	170	5.185249	GTCTGGTCTAGGTGATCAACAACTA	59.815	44.000	14.46	5.27	45.63	2.24
171	172	4.246458	GTCTGGTCTAGGTGATCAACAAC	58.754	47.826	14.46	7.90	35.04	3.32
172	173	3.056821	CGTCTGGTCTAGGTGATCAACAA	60.057	47.826	14.46	0.00	35.04	2.83
173	174	2.492088	CGTCTGGTCTAGGTGATCAACA	59.508	50.000	14.46	0.00	35.04	3.33
174	175	2.753452	TCGTCTGGTCTAGGTGATCAAC	59.247	50.000	1.26	1.26	35.04	3.18
175	176	3.017442	CTCGTCTGGTCTAGGTGATCAA	58.983	50.000	0.00	0.00	35.04	2.57
176	177	2.644676	CTCGTCTGGTCTAGGTGATCA	58.355	52.381	0.00	0.00	34.16	2.92
177	178	1.950909	CCTCGTCTGGTCTAGGTGATC	59.049	57.143	0.00	0.00	0.00	2.92
178	179	1.285373	ACCTCGTCTGGTCTAGGTGAT	59.715	52.381	0.00	0.00	40.83	3.06
179	180	0.697079	ACCTCGTCTGGTCTAGGTGA	59.303	55.000	0.00	0.00	40.83	4.02
180	181	1.202582	CAACCTCGTCTGGTCTAGGTG	59.797	57.143	0.00	0.00	41.51	4.00
181	182	1.075050	TCAACCTCGTCTGGTCTAGGT	59.925	52.381	0.00	0.00	44.24	3.08
182	183	1.746220	CTCAACCTCGTCTGGTCTAGG	59.254	57.143	0.00	0.00	39.83	3.02
183	184	1.746220	CCTCAACCTCGTCTGGTCTAG	59.254	57.143	0.00	0.00	39.83	2.43
184	185	1.353358	TCCTCAACCTCGTCTGGTCTA	59.647	52.381	0.00	0.00	39.83	2.59
185	186	0.112606	TCCTCAACCTCGTCTGGTCT	59.887	55.000	0.00	0.00	39.83	3.85
186	187	0.966920	TTCCTCAACCTCGTCTGGTC	59.033	55.000	0.00	0.00	39.83	4.02
187	188	1.420430	TTTCCTCAACCTCGTCTGGT	58.580	50.000	0.00	0.00	43.11	4.00
188	189	2.143925	GTTTTCCTCAACCTCGTCTGG	58.856	52.381	0.00	0.00	0.00	3.86
189	190	2.544267	GTGTTTTCCTCAACCTCGTCTG	59.456	50.000	0.00	0.00	0.00	3.51
190	191	2.169769	TGTGTTTTCCTCAACCTCGTCT	59.830	45.455	0.00	0.00	0.00	4.18
191	192	2.544267	CTGTGTTTTCCTCAACCTCGTC	59.456	50.000	0.00	0.00	0.00	4.20
192	193	2.561569	CTGTGTTTTCCTCAACCTCGT	58.438	47.619	0.00	0.00	0.00	4.18
193	194	1.873591	CCTGTGTTTTCCTCAACCTCG	59.126	52.381	0.00	0.00	0.00	4.63
194	195	2.618709	CACCTGTGTTTTCCTCAACCTC	59.381	50.000	0.00	0.00	0.00	3.85
195	196	2.654863	CACCTGTGTTTTCCTCAACCT	58.345	47.619	0.00	0.00	0.00	3.50
196	197	1.067060	GCACCTGTGTTTTCCTCAACC	59.933	52.381	0.00	0.00	0.00	3.77
197	198	1.268539	CGCACCTGTGTTTTCCTCAAC	60.269	52.381	0.00	0.00	0.00	3.18
198	199	1.021202	CGCACCTGTGTTTTCCTCAA	58.979	50.000	0.00	0.00	0.00	3.02
199	200	1.444119	GCGCACCTGTGTTTTCCTCA	61.444	55.000	0.30	0.00	0.00	3.86
200	201	1.282875	GCGCACCTGTGTTTTCCTC	59.717	57.895	0.30	0.00	0.00	3.71
201	202	2.193536	GGCGCACCTGTGTTTTCCT	61.194	57.895	10.83	0.00	0.00	3.36
202	203	2.335011	GGCGCACCTGTGTTTTCC	59.665	61.111	10.83	0.00	0.00	3.13
230	231	8.533569	AATAAAGAGGTTTCTGAGGTCAAAAA	57.466	30.769	0.00	0.00	32.79	1.94
231	232	7.777910	TGAATAAAGAGGTTTCTGAGGTCAAAA	59.222	33.333	0.00	0.00	32.79	2.44
232	233	7.287061	TGAATAAAGAGGTTTCTGAGGTCAAA	58.713	34.615	0.00	0.00	32.79	2.69
233	234	6.837312	TGAATAAAGAGGTTTCTGAGGTCAA	58.163	36.000	0.00	0.00	32.79	3.18
234	235	6.433847	TGAATAAAGAGGTTTCTGAGGTCA	57.566	37.500	0.00	0.00	32.79	4.02
235	236	7.929941	ATTGAATAAAGAGGTTTCTGAGGTC	57.070	36.000	0.00	0.00	32.79	3.85
236	237	8.826765	TCTATTGAATAAAGAGGTTTCTGAGGT	58.173	33.333	0.00	0.00	32.79	3.85
237	238	9.844257	ATCTATTGAATAAAGAGGTTTCTGAGG	57.156	33.333	0.00	0.00	32.79	3.86
264	265	9.631257	TCTCATGGTGAATGATGTAACATTATT	57.369	29.630	0.00	0.00	44.40	1.40
265	266	9.281371	CTCTCATGGTGAATGATGTAACATTAT	57.719	33.333	0.00	0.00	44.40	1.28
266	267	8.485392	TCTCTCATGGTGAATGATGTAACATTA	58.515	33.333	0.00	0.00	44.40	1.90
267	268	7.281774	GTCTCTCATGGTGAATGATGTAACATT	59.718	37.037	0.00	0.00	44.40	2.71
268	269	6.765036	GTCTCTCATGGTGAATGATGTAACAT	59.235	38.462	0.00	0.00	44.40	2.71
269	270	6.108687	GTCTCTCATGGTGAATGATGTAACA	58.891	40.000	0.00	0.00	44.40	2.41
270	271	5.233050	CGTCTCTCATGGTGAATGATGTAAC	59.767	44.000	0.00	0.00	44.40	2.50
271	272	5.351458	CGTCTCTCATGGTGAATGATGTAA	58.649	41.667	0.00	0.00	44.40	2.41
272	273	4.737649	GCGTCTCTCATGGTGAATGATGTA	60.738	45.833	0.00	0.00	44.40	2.29
273	274	3.790091	CGTCTCTCATGGTGAATGATGT	58.210	45.455	0.00	0.00	44.40	3.06
274	275	2.543012	GCGTCTCTCATGGTGAATGATG	59.457	50.000	0.00	0.00	44.40	3.07
275	276	2.484417	GGCGTCTCTCATGGTGAATGAT	60.484	50.000	0.00	0.00	44.40	2.45
276	277	1.134699	GGCGTCTCTCATGGTGAATGA	60.135	52.381	0.00	0.00	43.24	2.57
277	278	1.134580	AGGCGTCTCTCATGGTGAATG	60.135	52.381	0.00	0.00	37.66	2.67
278	279	1.198713	AGGCGTCTCTCATGGTGAAT	58.801	50.000	0.00	0.00	0.00	2.57
279	280	0.976641	AAGGCGTCTCTCATGGTGAA	59.023	50.000	0.00	0.00	0.00	3.18
280	281	0.247460	CAAGGCGTCTCTCATGGTGA	59.753	55.000	0.00	0.00	0.00	4.02
281	282	0.247460	TCAAGGCGTCTCTCATGGTG	59.753	55.000	0.00	0.00	0.00	4.17
282	283	1.134580	CATCAAGGCGTCTCTCATGGT	60.135	52.381	0.00	0.00	0.00	3.55
283	284	1.579698	CATCAAGGCGTCTCTCATGG	58.420	55.000	0.00	0.00	0.00	3.66
284	285	1.134580	ACCATCAAGGCGTCTCTCATG	60.135	52.381	0.00	0.00	43.14	3.07
285	286	1.198713	ACCATCAAGGCGTCTCTCAT	58.801	50.000	0.00	0.00	43.14	2.90
286	287	0.976641	AACCATCAAGGCGTCTCTCA	59.023	50.000	0.00	0.00	43.14	3.27
287	288	1.338200	ACAACCATCAAGGCGTCTCTC	60.338	52.381	0.00	0.00	43.14	3.20
288	289	0.687354	ACAACCATCAAGGCGTCTCT	59.313	50.000	0.00	0.00	43.14	3.10
289	290	0.798776	CACAACCATCAAGGCGTCTC	59.201	55.000	0.00	0.00	43.14	3.36
290	291	0.396435	TCACAACCATCAAGGCGTCT	59.604	50.000	0.00	0.00	43.14	4.18
291	292	0.798776	CTCACAACCATCAAGGCGTC	59.201	55.000	0.00	0.00	43.14	5.19
292	293	0.396435	TCTCACAACCATCAAGGCGT	59.604	50.000	0.00	0.00	43.14	5.68
293	294	1.466167	CTTCTCACAACCATCAAGGCG	59.534	52.381	0.00	0.00	43.14	5.52
294	295	2.227388	CACTTCTCACAACCATCAAGGC	59.773	50.000	0.00	0.00	43.14	4.35
295	296	2.816087	CCACTTCTCACAACCATCAAGG	59.184	50.000	0.00	0.00	45.67	3.61
296	297	3.480470	ACCACTTCTCACAACCATCAAG	58.520	45.455	0.00	0.00	0.00	3.02
297	298	3.476552	GACCACTTCTCACAACCATCAA	58.523	45.455	0.00	0.00	0.00	2.57
298	299	2.547855	CGACCACTTCTCACAACCATCA	60.548	50.000	0.00	0.00	0.00	3.07
299	300	2.069273	CGACCACTTCTCACAACCATC	58.931	52.381	0.00	0.00	0.00	3.51
300	301	1.691976	TCGACCACTTCTCACAACCAT	59.308	47.619	0.00	0.00	0.00	3.55
301	302	1.116308	TCGACCACTTCTCACAACCA	58.884	50.000	0.00	0.00	0.00	3.67
302	303	2.028930	AGATCGACCACTTCTCACAACC	60.029	50.000	0.00	0.00	0.00	3.77
303	304	3.305398	AGATCGACCACTTCTCACAAC	57.695	47.619	0.00	0.00	0.00	3.32
304	305	4.058124	CAAAGATCGACCACTTCTCACAA	58.942	43.478	0.00	0.00	0.00	3.33
305	306	3.320826	TCAAAGATCGACCACTTCTCACA	59.679	43.478	0.00	0.00	0.00	3.58
306	307	3.914312	TCAAAGATCGACCACTTCTCAC	58.086	45.455	0.00	0.00	0.00	3.51
307	308	4.600692	TTCAAAGATCGACCACTTCTCA	57.399	40.909	0.00	0.00	0.00	3.27
308	309	5.696724	TCTTTTCAAAGATCGACCACTTCTC	59.303	40.000	0.00	0.00	39.95	2.87
309	310	5.611374	TCTTTTCAAAGATCGACCACTTCT	58.389	37.500	0.00	0.00	39.95	2.85
310	311	5.924475	TCTTTTCAAAGATCGACCACTTC	57.076	39.130	0.00	0.00	39.95	3.01
311	312	6.238759	CCTTTCTTTTCAAAGATCGACCACTT	60.239	38.462	2.83	0.00	43.92	3.16
312	313	5.239525	CCTTTCTTTTCAAAGATCGACCACT	59.760	40.000	2.83	0.00	43.92	4.00
313	314	5.238650	TCCTTTCTTTTCAAAGATCGACCAC	59.761	40.000	2.83	0.00	43.92	4.16
314	315	5.373222	TCCTTTCTTTTCAAAGATCGACCA	58.627	37.500	2.83	0.00	43.92	4.02
315	316	5.701290	TCTCCTTTCTTTTCAAAGATCGACC	59.299	40.000	2.83	0.00	43.92	4.79
316	317	6.594886	GTCTCCTTTCTTTTCAAAGATCGAC	58.405	40.000	2.83	3.19	43.92	4.20
317	318	5.405571	CGTCTCCTTTCTTTTCAAAGATCGA	59.594	40.000	2.83	0.00	43.92	3.59
318	319	5.405571	TCGTCTCCTTTCTTTTCAAAGATCG	59.594	40.000	2.83	0.00	43.92	3.69
319	320	6.787085	TCGTCTCCTTTCTTTTCAAAGATC	57.213	37.500	2.83	0.00	43.92	2.75
320	321	7.568199	TTTCGTCTCCTTTCTTTTCAAAGAT	57.432	32.000	2.83	0.00	43.92	2.40
321	322	6.458342	GCTTTCGTCTCCTTTCTTTTCAAAGA	60.458	38.462	0.00	0.00	42.91	2.52
322	323	5.683302	GCTTTCGTCTCCTTTCTTTTCAAAG	59.317	40.000	0.00	0.00	37.36	2.77
323	324	5.449999	GGCTTTCGTCTCCTTTCTTTTCAAA	60.450	40.000	0.00	0.00	0.00	2.69
324	325	4.036380	GGCTTTCGTCTCCTTTCTTTTCAA	59.964	41.667	0.00	0.00	0.00	2.69
325	326	3.564225	GGCTTTCGTCTCCTTTCTTTTCA	59.436	43.478	0.00	0.00	0.00	2.69
326	327	3.364068	CGGCTTTCGTCTCCTTTCTTTTC	60.364	47.826	0.00	0.00	0.00	2.29
327	328	2.548480	CGGCTTTCGTCTCCTTTCTTTT	59.452	45.455	0.00	0.00	0.00	2.27
328	329	2.143925	CGGCTTTCGTCTCCTTTCTTT	58.856	47.619	0.00	0.00	0.00	2.52
329	330	1.797025	CGGCTTTCGTCTCCTTTCTT	58.203	50.000	0.00	0.00	0.00	2.52
330	331	3.516578	CGGCTTTCGTCTCCTTTCT	57.483	52.632	0.00	0.00	0.00	2.52
340	341	2.468532	AAGTGTTTTGACGGCTTTCG	57.531	45.000	0.00	0.00	45.88	3.46
341	342	7.136772	AGTAAATAAGTGTTTTGACGGCTTTC	58.863	34.615	0.00	0.00	0.00	2.62
342	343	7.034685	AGTAAATAAGTGTTTTGACGGCTTT	57.965	32.000	0.00	0.00	0.00	3.51
343	344	6.565247	CGAGTAAATAAGTGTTTTGACGGCTT	60.565	38.462	0.00	0.00	0.00	4.35
344	345	5.107220	CGAGTAAATAAGTGTTTTGACGGCT	60.107	40.000	0.00	0.00	0.00	5.52
345	346	5.077424	CGAGTAAATAAGTGTTTTGACGGC	58.923	41.667	0.00	0.00	0.00	5.68
346	347	6.145048	AGACGAGTAAATAAGTGTTTTGACGG	59.855	38.462	0.00	0.00	0.00	4.79
347	348	7.101993	AGACGAGTAAATAAGTGTTTTGACG	57.898	36.000	0.00	0.00	0.00	4.35
348	349	8.545420	TGAAGACGAGTAAATAAGTGTTTTGAC	58.455	33.333	0.00	0.00	0.00	3.18
349	350	8.545420	GTGAAGACGAGTAAATAAGTGTTTTGA	58.455	33.333	0.00	0.00	0.00	2.69
350	351	8.548721	AGTGAAGACGAGTAAATAAGTGTTTTG	58.451	33.333	0.00	0.00	0.00	2.44
351	352	8.658499	AGTGAAGACGAGTAAATAAGTGTTTT	57.342	30.769	0.00	0.00	0.00	2.43
352	353	7.924412	TGAGTGAAGACGAGTAAATAAGTGTTT	59.076	33.333	0.00	0.00	0.00	2.83
353	354	7.381678	GTGAGTGAAGACGAGTAAATAAGTGTT	59.618	37.037	0.00	0.00	0.00	3.32
354	355	6.862090	GTGAGTGAAGACGAGTAAATAAGTGT	59.138	38.462	0.00	0.00	0.00	3.55
355	356	6.861572	TGTGAGTGAAGACGAGTAAATAAGTG	59.138	38.462	0.00	0.00	0.00	3.16
356	357	6.978338	TGTGAGTGAAGACGAGTAAATAAGT	58.022	36.000	0.00	0.00	0.00	2.24
357	358	9.737427	ATATGTGAGTGAAGACGAGTAAATAAG	57.263	33.333	0.00	0.00	0.00	1.73
359	360	9.516314	CAATATGTGAGTGAAGACGAGTAAATA	57.484	33.333	0.00	0.00	0.00	1.40
360	361	7.492669	CCAATATGTGAGTGAAGACGAGTAAAT	59.507	37.037	0.00	0.00	0.00	1.40
361	362	6.811665	CCAATATGTGAGTGAAGACGAGTAAA	59.188	38.462	0.00	0.00	0.00	2.01
362	363	6.330278	CCAATATGTGAGTGAAGACGAGTAA	58.670	40.000	0.00	0.00	0.00	2.24
363	364	5.163550	CCCAATATGTGAGTGAAGACGAGTA	60.164	44.000	0.00	0.00	0.00	2.59
364	365	4.382040	CCCAATATGTGAGTGAAGACGAGT	60.382	45.833	0.00	0.00	0.00	4.18
365	366	4.115516	CCCAATATGTGAGTGAAGACGAG	58.884	47.826	0.00	0.00	0.00	4.18
366	367	3.678806	GCCCAATATGTGAGTGAAGACGA	60.679	47.826	0.00	0.00	0.00	4.20
367	368	2.609459	GCCCAATATGTGAGTGAAGACG	59.391	50.000	0.00	0.00	0.00	4.18
368	369	3.878778	AGCCCAATATGTGAGTGAAGAC	58.121	45.455	0.00	0.00	0.00	3.01
369	370	4.225942	AGAAGCCCAATATGTGAGTGAAGA	59.774	41.667	0.00	0.00	0.00	2.87
370	371	4.521146	AGAAGCCCAATATGTGAGTGAAG	58.479	43.478	0.00	0.00	0.00	3.02
371	372	4.574674	AGAAGCCCAATATGTGAGTGAA	57.425	40.909	0.00	0.00	0.00	3.18
372	373	4.517285	GAAGAAGCCCAATATGTGAGTGA	58.483	43.478	0.00	0.00	0.00	3.41
373	374	3.310774	CGAAGAAGCCCAATATGTGAGTG	59.689	47.826	0.00	0.00	0.00	3.51
374	375	3.197766	TCGAAGAAGCCCAATATGTGAGT	59.802	43.478	0.00	0.00	0.00	3.41
375	376	3.797039	TCGAAGAAGCCCAATATGTGAG	58.203	45.455	0.00	0.00	0.00	3.51
376	377	3.197766	ACTCGAAGAAGCCCAATATGTGA	59.802	43.478	0.00	0.00	34.09	3.58
377	378	3.310774	CACTCGAAGAAGCCCAATATGTG	59.689	47.826	0.00	0.00	34.09	3.21
378	379	3.535561	CACTCGAAGAAGCCCAATATGT	58.464	45.455	0.00	0.00	34.09	2.29
379	380	2.289002	GCACTCGAAGAAGCCCAATATG	59.711	50.000	0.00	0.00	34.09	1.78
380	381	2.092968	TGCACTCGAAGAAGCCCAATAT	60.093	45.455	0.00	0.00	36.91	1.28
381	382	1.277842	TGCACTCGAAGAAGCCCAATA	59.722	47.619	0.00	0.00	36.91	1.90
382	383	0.036732	TGCACTCGAAGAAGCCCAAT	59.963	50.000	0.00	0.00	36.91	3.16
383	384	0.179032	TTGCACTCGAAGAAGCCCAA	60.179	50.000	0.00	0.00	36.91	4.12
384	385	0.179032	TTTGCACTCGAAGAAGCCCA	60.179	50.000	0.00	0.00	36.91	5.36
385	386	0.951558	TTTTGCACTCGAAGAAGCCC	59.048	50.000	0.00	0.00	36.91	5.19
386	387	2.605580	CCTTTTTGCACTCGAAGAAGCC	60.606	50.000	0.00	0.00	36.91	4.35
387	388	2.654987	CCTTTTTGCACTCGAAGAAGC	58.345	47.619	0.00	0.00	38.00	3.86
388	389	2.605580	GGCCTTTTTGCACTCGAAGAAG	60.606	50.000	0.00	0.00	34.09	2.85
389	390	1.336755	GGCCTTTTTGCACTCGAAGAA	59.663	47.619	0.00	0.00	34.09	2.52
390	391	0.951558	GGCCTTTTTGCACTCGAAGA	59.048	50.000	0.00	0.00	0.00	2.87
391	392	0.039165	GGGCCTTTTTGCACTCGAAG	60.039	55.000	0.84	0.00	0.00	3.79
392	393	0.753479	TGGGCCTTTTTGCACTCGAA	60.753	50.000	4.53	0.00	35.05	3.71
393	394	0.539438	ATGGGCCTTTTTGCACTCGA	60.539	50.000	4.53	0.00	35.05	4.04
394	395	0.318120	AATGGGCCTTTTTGCACTCG	59.682	50.000	4.53	0.00	35.05	4.18
395	396	1.608801	CCAATGGGCCTTTTTGCACTC	60.609	52.381	4.53	0.00	35.05	3.51
396	397	0.397564	CCAATGGGCCTTTTTGCACT	59.602	50.000	4.53	0.00	35.05	4.40
397	398	2.931246	CCAATGGGCCTTTTTGCAC	58.069	52.632	4.53	0.00	34.38	4.57
409	410	2.712325	TTTTGCTGCGTGGCCAATGG	62.712	55.000	7.24	0.01	0.00	3.16
410	411	1.286354	CTTTTGCTGCGTGGCCAATG	61.286	55.000	7.24	3.94	0.00	2.82
411	412	1.005867	CTTTTGCTGCGTGGCCAAT	60.006	52.632	7.24	0.00	0.00	3.16
412	413	2.416678	CTTTTGCTGCGTGGCCAA	59.583	55.556	7.24	0.00	0.00	4.52
413	414	4.283403	GCTTTTGCTGCGTGGCCA	62.283	61.111	0.00	0.00	43.35	5.36
415	416	3.982241	AGGCTTTTGCTGCGTGGC	61.982	61.111	0.00	0.00	46.54	5.01
416	417	2.049802	CAGGCTTTTGCTGCGTGG	60.050	61.111	0.00	0.00	46.54	4.94
418	419	2.896801	CGACAGGCTTTTGCTGCGT	61.897	57.895	0.00	0.00	46.54	5.24
419	420	2.127118	CGACAGGCTTTTGCTGCG	60.127	61.111	0.00	0.00	46.54	5.18
420	421	1.208614	CTCGACAGGCTTTTGCTGC	59.791	57.895	0.00	0.00	46.54	5.25
421	422	0.514691	GACTCGACAGGCTTTTGCTG	59.485	55.000	0.00	0.00	46.54	4.41
422	423	0.394565	AGACTCGACAGGCTTTTGCT	59.605	50.000	0.00	0.00	46.54	3.91
423	424	0.793250	GAGACTCGACAGGCTTTTGC	59.207	55.000	0.00	0.00	38.61	3.68
424	425	2.333014	GAGAGACTCGACAGGCTTTTG	58.667	52.381	0.00	0.00	38.61	2.44
425	426	1.273886	GGAGAGACTCGACAGGCTTTT	59.726	52.381	0.00	0.00	38.61	2.27
426	427	0.892063	GGAGAGACTCGACAGGCTTT	59.108	55.000	0.00	0.00	38.61	3.51
427	428	0.039035	AGGAGAGACTCGACAGGCTT	59.961	55.000	0.00	0.00	38.61	4.35
428	429	0.913205	TAGGAGAGACTCGACAGGCT	59.087	55.000	0.00	0.00	42.89	4.58
429	430	1.018910	GTAGGAGAGACTCGACAGGC	58.981	60.000	0.00	0.00	0.00	4.85
430	431	1.065345	TGGTAGGAGAGACTCGACAGG	60.065	57.143	0.00	0.00	0.00	4.00
431	432	2.404923	TGGTAGGAGAGACTCGACAG	57.595	55.000	0.00	0.00	0.00	3.51
432	433	2.434428	GTTGGTAGGAGAGACTCGACA	58.566	52.381	0.00	0.00	0.00	4.35
433	434	1.744522	GGTTGGTAGGAGAGACTCGAC	59.255	57.143	0.00	0.00	0.00	4.20
434	435	1.678123	CGGTTGGTAGGAGAGACTCGA	60.678	57.143	0.00	0.00	0.00	4.04
435	436	0.733729	CGGTTGGTAGGAGAGACTCG	59.266	60.000	0.00	0.00	0.00	4.18
436	437	0.456628	GCGGTTGGTAGGAGAGACTC	59.543	60.000	0.00	0.00	0.00	3.36
437	438	0.971447	GGCGGTTGGTAGGAGAGACT	60.971	60.000	0.00	0.00	0.00	3.24
438	439	1.516423	GGCGGTTGGTAGGAGAGAC	59.484	63.158	0.00	0.00	0.00	3.36
439	440	2.050350	CGGCGGTTGGTAGGAGAGA	61.050	63.158	0.00	0.00	0.00	3.10
440	441	2.494918	CGGCGGTTGGTAGGAGAG	59.505	66.667	0.00	0.00	0.00	3.20
441	442	3.072468	CCGGCGGTTGGTAGGAGA	61.072	66.667	19.97	0.00	0.00	3.71
442	443	4.832608	GCCGGCGGTTGGTAGGAG	62.833	72.222	28.82	0.00	0.00	3.69
453	454	3.792053	AATAGAAGGAGCGCCGGCG	62.792	63.158	43.13	43.13	46.35	6.46
454	455	1.956678	GAATAGAAGGAGCGCCGGC	60.957	63.158	19.07	19.07	39.96	6.13
455	456	0.319125	GAGAATAGAAGGAGCGCCGG	60.319	60.000	2.29	0.00	39.96	6.13
456	457	0.319125	GGAGAATAGAAGGAGCGCCG	60.319	60.000	2.29	0.00	39.96	6.46
457	458	0.753262	TGGAGAATAGAAGGAGCGCC	59.247	55.000	2.29	0.00	0.00	6.53
458	459	2.604046	TTGGAGAATAGAAGGAGCGC	57.396	50.000	0.00	0.00	0.00	5.92
459	460	3.556004	GGGATTGGAGAATAGAAGGAGCG	60.556	52.174	0.00	0.00	0.00	5.03
460	461	3.392616	TGGGATTGGAGAATAGAAGGAGC	59.607	47.826	0.00	0.00	0.00	4.70
461	462	5.568423	CGATGGGATTGGAGAATAGAAGGAG	60.568	48.000	0.00	0.00	0.00	3.69
462	463	4.284490	CGATGGGATTGGAGAATAGAAGGA	59.716	45.833	0.00	0.00	0.00	3.36
463	464	4.573900	CGATGGGATTGGAGAATAGAAGG	58.426	47.826	0.00	0.00	0.00	3.46
464	465	3.999663	GCGATGGGATTGGAGAATAGAAG	59.000	47.826	0.00	0.00	0.00	2.85
465	466	3.244561	GGCGATGGGATTGGAGAATAGAA	60.245	47.826	0.00	0.00	0.00	2.10
466	467	2.303022	GGCGATGGGATTGGAGAATAGA	59.697	50.000	0.00	0.00	0.00	1.98
467	468	2.038952	TGGCGATGGGATTGGAGAATAG	59.961	50.000	0.00	0.00	0.00	1.73
468	469	2.054021	TGGCGATGGGATTGGAGAATA	58.946	47.619	0.00	0.00	0.00	1.75
469	470	0.846015	TGGCGATGGGATTGGAGAAT	59.154	50.000	0.00	0.00	0.00	2.40
470	471	0.107214	GTGGCGATGGGATTGGAGAA	60.107	55.000	0.00	0.00	0.00	2.87
471	472	1.526887	GTGGCGATGGGATTGGAGA	59.473	57.895	0.00	0.00	0.00	3.71
472	473	1.526917	GGTGGCGATGGGATTGGAG	60.527	63.158	0.00	0.00	0.00	3.86
473	474	2.595095	GGTGGCGATGGGATTGGA	59.405	61.111	0.00	0.00	0.00	3.53
474	475	2.901840	CGGTGGCGATGGGATTGG	60.902	66.667	0.00	0.00	0.00	3.16
475	476	3.585990	GCGGTGGCGATGGGATTG	61.586	66.667	0.00	0.00	0.00	2.67
476	477	4.875713	GGCGGTGGCGATGGGATT	62.876	66.667	0.00	0.00	41.24	3.01
491	492	4.388499	TCTTGGGGAACGAGCGGC	62.388	66.667	0.00	0.00	0.00	6.53
492	493	1.601419	TAGTCTTGGGGAACGAGCGG	61.601	60.000	0.00	0.00	0.00	5.52
493	494	0.458025	GTAGTCTTGGGGAACGAGCG	60.458	60.000	0.00	0.00	0.00	5.03
494	495	0.108281	GGTAGTCTTGGGGAACGAGC	60.108	60.000	0.00	0.00	0.00	5.03
495	496	1.067071	GTGGTAGTCTTGGGGAACGAG	60.067	57.143	0.00	0.00	0.00	4.18
496	497	0.971386	GTGGTAGTCTTGGGGAACGA	59.029	55.000	0.00	0.00	0.00	3.85
497	498	0.389426	CGTGGTAGTCTTGGGGAACG	60.389	60.000	0.00	0.00	0.00	3.95
498	499	0.036671	CCGTGGTAGTCTTGGGGAAC	60.037	60.000	0.00	0.00	0.00	3.62
499	500	0.472352	ACCGTGGTAGTCTTGGGGAA	60.472	55.000	0.00	0.00	0.00	3.97
500	501	0.901580	GACCGTGGTAGTCTTGGGGA	60.902	60.000	0.00	0.00	0.00	4.81
501	502	1.595357	GACCGTGGTAGTCTTGGGG	59.405	63.158	0.00	0.00	0.00	4.96
502	503	1.595357	GGACCGTGGTAGTCTTGGG	59.405	63.158	0.00	0.00	34.56	4.12
503	504	1.595357	GGGACCGTGGTAGTCTTGG	59.405	63.158	0.00	0.00	34.56	3.61
504	505	1.214589	CGGGACCGTGGTAGTCTTG	59.785	63.158	1.86	0.00	34.56	3.02
505	506	1.980772	CCGGGACCGTGGTAGTCTT	60.981	63.158	10.17	0.00	37.81	3.01
506	507	2.362120	CCGGGACCGTGGTAGTCT	60.362	66.667	10.17	0.00	37.81	3.24
507	508	4.139234	GCCGGGACCGTGGTAGTC	62.139	72.222	2.18	0.00	37.81	2.59
509	510	3.242897	TTTGCCGGGACCGTGGTAG	62.243	63.158	2.18	0.00	37.81	3.18
510	511	3.240011	TTTGCCGGGACCGTGGTA	61.240	61.111	2.18	0.00	37.81	3.25
511	512	4.941309	GTTTGCCGGGACCGTGGT	62.941	66.667	2.18	0.00	37.81	4.16
519	520	4.994756	AAGCCAGGGTTTGCCGGG	62.995	66.667	2.18	0.00	34.97	5.73
645	664	4.760047	TCGGCGAGGAAGGCAAGC	62.760	66.667	4.99	0.00	36.37	4.01
646	665	2.815647	GTCGGCGAGGAAGGCAAG	60.816	66.667	11.20	0.00	36.37	4.01
647	666	4.388499	GGTCGGCGAGGAAGGCAA	62.388	66.667	11.20	0.00	36.37	4.52
649	668	4.516195	GAGGTCGGCGAGGAAGGC	62.516	72.222	11.20	0.00	0.00	4.35
650	669	4.194720	CGAGGTCGGCGAGGAAGG	62.195	72.222	11.20	0.00	35.37	3.46
660	679	3.827898	GTGGAGAGGCCGAGGTCG	61.828	72.222	0.00	0.00	40.66	4.79
661	680	3.462678	GGTGGAGAGGCCGAGGTC	61.463	72.222	0.00	0.00	40.66	3.85
752	795	1.263776	GATCTCAGAACGCGACAGTG	58.736	55.000	15.93	4.49	0.00	3.66
952	998	0.037232	GAACCTAGCGTGCACTCCTT	60.037	55.000	16.19	0.00	0.00	3.36
1097	1143	2.160946	GCAACAGACTGCAGAGCTC	58.839	57.895	23.35	5.27	42.17	4.09
1212	1258	0.535102	ACCTCTTCAGCACAAACGGG	60.535	55.000	0.00	0.00	0.00	5.28
1405	1583	4.193826	ACAAGACCATGCTGTAGTAGTG	57.806	45.455	0.00	0.00	0.00	2.74
1589	1771	9.556030	GCCTAATTAAAGAACACATAGAACAAC	57.444	33.333	0.00	0.00	0.00	3.32
1663	1845	3.517602	TCCGTTGACAAATGAGATACCG	58.482	45.455	0.00	0.00	0.00	4.02
1670	1852	1.606668	GCACCTTCCGTTGACAAATGA	59.393	47.619	0.00	0.00	0.00	2.57
1681	1863	2.122783	TCCCTATTTTGCACCTTCCG	57.877	50.000	0.00	0.00	0.00	4.30
1715	1897	2.777832	AGAGTGTCCAATGGAAGCTC	57.222	50.000	19.96	19.96	36.03	4.09
1770	1952	6.801539	TTGGAGATAAATTGATCGGCATAC	57.198	37.500	0.00	0.00	0.00	2.39
1829	2011	8.508062	ACTATTGTACACACATATTTCGCAAAA	58.492	29.630	0.00	0.00	33.76	2.44
1849	2031	9.669353	GTGATACAAAGATAAATGGCACTATTG	57.331	33.333	0.00	0.00	0.00	1.90
1891	2073	7.071196	TGGATGGCTGACTATAAGTAAACTGAT	59.929	37.037	0.00	0.00	0.00	2.90
1896	2078	6.998074	CCAATGGATGGCTGACTATAAGTAAA	59.002	38.462	0.00	0.00	43.80	2.01
1899	2081	4.978099	CCAATGGATGGCTGACTATAAGT	58.022	43.478	0.00	0.00	43.80	2.24
1930	2113	0.981183	ACATAGGTGCTTCACGGGAA	59.019	50.000	0.00	0.00	34.83	3.97
1932	2115	1.086696	CAACATAGGTGCTTCACGGG	58.913	55.000	0.00	0.00	34.83	5.28
1971	3370	0.033796	CACCTGGAGGCACATGGATT	60.034	55.000	0.00	0.00	39.32	3.01
2003	3402	4.799255	GCCATCCAAAACCTAACCAAACTG	60.799	45.833	0.00	0.00	0.00	3.16
2031	3437	4.572389	AGAAGAGTGCATTAATTACGGCAG	59.428	41.667	9.79	0.00	36.86	4.85
2036	3442	7.912250	CCAATGACAGAAGAGTGCATTAATTAC	59.088	37.037	0.00	0.00	0.00	1.89
2039	3445	5.948162	ACCAATGACAGAAGAGTGCATTAAT	59.052	36.000	0.00	0.00	0.00	1.40
2040	3446	5.316167	ACCAATGACAGAAGAGTGCATTAA	58.684	37.500	0.00	0.00	0.00	1.40
2056	3462	2.665165	ACCAGAGTTTGCAACCAATGA	58.335	42.857	0.00	0.00	0.00	2.57
2080	3486	5.747342	ACCCTGCTCATTAAACGGTAATAA	58.253	37.500	0.00	0.00	0.00	1.40
2139	3545	5.523188	GTGATGTGCATTCTGTTTGGAAAAA	59.477	36.000	0.00	0.00	0.00	1.94
2140	3546	5.049167	GTGATGTGCATTCTGTTTGGAAAA	58.951	37.500	0.00	0.00	0.00	2.29
2141	3547	4.099113	TGTGATGTGCATTCTGTTTGGAAA	59.901	37.500	0.00	0.00	0.00	3.13
2144	3550	3.005050	ACTGTGATGTGCATTCTGTTTGG	59.995	43.478	0.00	0.00	0.00	3.28
2157	3564	2.119495	GTGGGATCCCTACTGTGATGT	58.881	52.381	31.05	0.00	36.94	3.06
2196	3604	8.985315	ATTTATCTCACCTATGAAAATGCAGA	57.015	30.769	0.00	0.00	33.30	4.26
2206	3614	7.106239	AGGGCGAATTATTTATCTCACCTATG	58.894	38.462	0.00	0.00	0.00	2.23
2212	3620	7.468631	GCAGAAAAGGGCGAATTATTTATCTCA	60.469	37.037	0.00	0.00	0.00	3.27
2226	3637	0.597568	TGAACATGCAGAAAAGGGCG	59.402	50.000	0.00	0.00	0.00	6.13
2235	3646	1.170442	TGGCTGTCATGAACATGCAG	58.830	50.000	22.16	22.16	41.48	4.41
2244	3655	5.396101	CCCTAGATGGTATATGGCTGTCATG	60.396	48.000	4.74	0.00	37.30	3.07
2245	3656	4.718774	CCCTAGATGGTATATGGCTGTCAT	59.281	45.833	0.00	0.00	39.78	3.06
2255	3666	5.019470	CAGCAGATGTCCCTAGATGGTATA	58.981	45.833	0.00	0.00	0.00	1.47
2278	3689	8.975439	CCTACGACAACAATTATAATCACCTAC	58.025	37.037	0.00	0.00	0.00	3.18
2300	3711	2.683362	GCTTTGTGGCATAAGGACCTAC	59.317	50.000	10.23	0.00	0.00	3.18
2315	3726	3.885297	ACTATGAACAACAGCAGCTTTGT	59.115	39.130	13.91	13.91	37.55	2.83
2335	3746	6.357579	TGCATGAATATTTGAAACCCAACT	57.642	33.333	0.00	0.00	33.85	3.16
2339	3750	5.916318	TCCATGCATGAATATTTGAAACCC	58.084	37.500	28.31	0.00	0.00	4.11
2344	3756	8.691797	CATATCCATCCATGCATGAATATTTGA	58.308	33.333	28.31	14.50	0.00	2.69
2347	3759	8.279361	TCTCATATCCATCCATGCATGAATATT	58.721	33.333	28.31	10.22	0.00	1.28
2350	3762	6.074698	TCTCATATCCATCCATGCATGAAT	57.925	37.500	28.31	11.13	0.00	2.57
2379	3791	5.208463	ACAGTGAAACCAAACAAAACAGT	57.792	34.783	0.00	0.00	37.80	3.55
2432	3845	9.638239	TTCCTTATCTGTACAATTCAAAATTGC	57.362	29.630	11.33	0.00	32.55	3.56
2482	3895	2.796032	GCGCAACTCAATTAGGCCAATC	60.796	50.000	5.01	0.00	0.00	2.67
2525	3938	0.843984	ATACCATTTCGGGGTCAGGG	59.156	55.000	0.00	0.00	39.85	4.45
2527	3940	3.467803	GAAGATACCATTTCGGGGTCAG	58.532	50.000	0.00	0.00	39.85	3.51

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.