Multiple sequence alignment - TraesCS6D01G017100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G017100 chr6D 100.000 9919 0 0 1 9919 7098661 7108579 0.000000e+00 18318.0
1 TraesCS6D01G017100 chr6D 86.691 541 60 7 4777 5315 263998935 263998405 3.090000e-164 590.0
2 TraesCS6D01G017100 chr6D 93.213 221 14 1 3165 3384 7116307 7116527 3.460000e-84 324.0
3 TraesCS6D01G017100 chr6A 92.505 4376 184 56 1330 5608 6727439 6731767 0.000000e+00 6131.0
4 TraesCS6D01G017100 chr6A 92.930 3027 151 31 5881 8891 6732297 6735276 0.000000e+00 4346.0
5 TraesCS6D01G017100 chr6A 92.895 1717 88 12 7182 8885 6739276 6740971 0.000000e+00 2464.0
6 TraesCS6D01G017100 chr6A 82.531 727 63 29 8451 9135 6736148 6736852 1.860000e-161 580.0
7 TraesCS6D01G017100 chr6A 86.137 541 65 9 4777 5315 59352058 59352590 8.640000e-160 575.0
8 TraesCS6D01G017100 chr6A 94.848 330 15 2 1 328 6725211 6725540 1.910000e-141 514.0
9 TraesCS6D01G017100 chr6A 86.292 445 30 13 9482 9919 6741702 6742122 1.170000e-123 455.0
10 TraesCS6D01G017100 chr6A 87.909 397 33 7 655 1048 6726864 6727248 4.220000e-123 453.0
11 TraesCS6D01G017100 chr6A 85.859 396 35 6 8954 9334 6737058 6737447 1.550000e-107 401.0
12 TraesCS6D01G017100 chr6A 87.826 345 21 12 321 661 6725568 6725895 1.560000e-102 385.0
13 TraesCS6D01G017100 chr6A 86.025 322 32 8 9155 9476 6735319 6735627 5.740000e-87 333.0
14 TraesCS6D01G017100 chr6A 89.640 222 21 2 3165 3384 6748399 6748620 2.110000e-71 281.0
15 TraesCS6D01G017100 chr6A 86.364 264 23 12 9661 9919 6738236 6738491 9.810000e-70 276.0
16 TraesCS6D01G017100 chr6A 96.000 125 4 1 5657 5781 6732163 6732286 1.690000e-47 202.0
17 TraesCS6D01G017100 chr6A 87.050 139 12 4 9326 9464 6741459 6741591 1.730000e-32 152.0
18 TraesCS6D01G017100 chr6A 93.617 94 4 2 9383 9476 6737463 6737554 1.340000e-28 139.0
19 TraesCS6D01G017100 chr6A 90.625 64 6 0 9265 9328 6741368 6741431 1.780000e-12 86.1
20 TraesCS6D01G017100 chr6B 92.508 3070 149 36 2760 5781 12667613 12670649 0.000000e+00 4320.0
21 TraesCS6D01G017100 chr6B 90.518 3164 176 55 6066 9151 12670895 12674012 0.000000e+00 4067.0
22 TraesCS6D01G017100 chr6B 84.847 2422 205 77 407 2747 12665233 12667573 0.000000e+00 2290.0
23 TraesCS6D01G017100 chr6B 86.812 690 74 10 465 1144 12663730 12664412 0.000000e+00 754.0
24 TraesCS6D01G017100 chr6B 90.533 507 39 6 12 516 12663128 12663627 0.000000e+00 662.0
25 TraesCS6D01G017100 chr6B 87.222 540 59 5 4777 5315 560623884 560623354 3.060000e-169 606.0
26 TraesCS6D01G017100 chr6B 83.669 447 55 10 9479 9919 12675927 12676361 1.200000e-108 405.0
27 TraesCS6D01G017100 chr6B 94.894 235 8 2 8488 8719 12674914 12675147 2.040000e-96 364.0
28 TraesCS6D01G017100 chr6B 81.623 419 32 12 9070 9476 12675183 12675568 1.250000e-78 305.0
29 TraesCS6D01G017100 chr6B 83.729 295 28 13 9518 9808 12674529 12674807 2.750000e-65 261.0
30 TraesCS6D01G017100 chr6B 92.216 167 10 3 5913 6078 12670685 12670849 5.990000e-57 233.0
31 TraesCS6D01G017100 chr6B 85.165 182 22 5 9739 9919 13969835 13970012 2.200000e-41 182.0
32 TraesCS6D01G017100 chr6B 93.258 89 6 0 3043 3131 608038972 608039060 2.250000e-26 132.0
33 TraesCS6D01G017100 chr6B 93.103 87 6 0 433 519 12663645 12663731 2.910000e-25 128.0
34 TraesCS6D01G017100 chr7D 86.792 530 59 6 4788 5315 535318608 535318088 1.860000e-161 580.0
35 TraesCS6D01G017100 chr2A 85.926 540 64 7 4777 5314 655315184 655314655 5.200000e-157 566.0
36 TraesCS6D01G017100 chr2A 93.590 156 10 0 3043 3198 500244955 500245110 5.990000e-57 233.0
37 TraesCS6D01G017100 chr2B 85.028 541 70 7 4777 5315 496492539 496493070 3.150000e-149 540.0
38 TraesCS6D01G017100 chr2D 84.473 541 60 8 4777 5315 540172899 540173417 6.870000e-141 512.0
39 TraesCS6D01G017100 chr2D 100.000 95 0 0 5782 5876 648660147 648660241 1.020000e-39 176.0
40 TraesCS6D01G017100 chr2D 100.000 95 0 0 5782 5876 648662088 648661994 1.020000e-39 176.0
41 TraesCS6D01G017100 chr2D 100.000 95 0 0 5782 5876 648662487 648662581 1.020000e-39 176.0
42 TraesCS6D01G017100 chr5A 88.809 277 28 2 5041 5315 629267913 629268188 4.440000e-88 337.0
43 TraesCS6D01G017100 chr5A 87.421 159 16 3 4777 4933 629267745 629267901 7.920000e-41 180.0
44 TraesCS6D01G017100 chr7B 93.590 156 10 0 3043 3198 651562049 651562204 5.990000e-57 233.0
45 TraesCS6D01G017100 chr7B 93.590 156 10 0 3043 3198 651737061 651737216 5.990000e-57 233.0
46 TraesCS6D01G017100 chr3B 94.079 152 9 0 3043 3194 588910432 588910583 2.150000e-56 231.0
47 TraesCS6D01G017100 chr4B 92.308 156 12 0 3043 3198 667283510 667283665 1.300000e-53 222.0
48 TraesCS6D01G017100 chr4B 91.667 156 13 0 3043 3198 667298669 667298824 6.030000e-52 217.0
49 TraesCS6D01G017100 chr3D 87.006 177 19 3 4788 4962 560193423 560193597 7.860000e-46 196.0
50 TraesCS6D01G017100 chrUn 100.000 95 0 0 5782 5876 397677190 397677096 1.020000e-39 176.0
51 TraesCS6D01G017100 chrUn 100.000 95 0 0 5782 5876 462818608 462818702 1.020000e-39 176.0
52 TraesCS6D01G017100 chr5D 100.000 95 0 0 5782 5876 6235084 6235178 1.020000e-39 176.0
53 TraesCS6D01G017100 chr4A 100.000 95 0 0 5782 5876 309288023 309288117 1.020000e-39 176.0
54 TraesCS6D01G017100 chr1D 100.000 95 0 0 5782 5876 180354585 180354679 1.020000e-39 176.0
55 TraesCS6D01G017100 chr1A 100.000 95 0 0 5782 5876 554447130 554447224 1.020000e-39 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G017100 chr6D 7098661 7108579 9918 False 18318.000000 18318 100.000000 1 9919 1 chr6D.!!$F1 9918
1 TraesCS6D01G017100 chr6D 263998405 263998935 530 True 590.000000 590 86.691000 4777 5315 1 chr6D.!!$R1 538
2 TraesCS6D01G017100 chr6A 6725211 6742122 16911 False 1127.806667 6131 89.551733 1 9919 15 chr6A.!!$F3 9918
3 TraesCS6D01G017100 chr6A 59352058 59352590 532 False 575.000000 575 86.137000 4777 5315 1 chr6A.!!$F2 538
4 TraesCS6D01G017100 chr6B 12663128 12676361 13233 False 1253.545455 4320 88.586545 12 9919 11 chr6B.!!$F3 9907
5 TraesCS6D01G017100 chr6B 560623354 560623884 530 True 606.000000 606 87.222000 4777 5315 1 chr6B.!!$R1 538
6 TraesCS6D01G017100 chr7D 535318088 535318608 520 True 580.000000 580 86.792000 4788 5315 1 chr7D.!!$R1 527
7 TraesCS6D01G017100 chr2A 655314655 655315184 529 True 566.000000 566 85.926000 4777 5314 1 chr2A.!!$R1 537
8 TraesCS6D01G017100 chr2B 496492539 496493070 531 False 540.000000 540 85.028000 4777 5315 1 chr2B.!!$F1 538
9 TraesCS6D01G017100 chr2D 540172899 540173417 518 False 512.000000 512 84.473000 4777 5315 1 chr2D.!!$F1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 699 0.101040 CAATAGCGCCAACCACCATG 59.899 55.000 2.29 0.00 0.00 3.66 F
1050 2268 0.101579 GTGTAGCCTCGCTCTTCCTC 59.898 60.000 0.00 0.00 40.44 3.71 F
1080 2298 0.105607 CCCTCCCCCTACCTACAGTC 60.106 65.000 0.00 0.00 0.00 3.51 F
1549 4308 0.105778 CCATCGGGCTTTCTCCTCTC 59.894 60.000 0.00 0.00 0.00 3.20 F
2206 5067 0.322975 CTGCTGTGCCCTGAACTACT 59.677 55.000 0.00 0.00 0.00 2.57 F
3141 6075 1.667724 GCATCCACCTCTCAAATGTCG 59.332 52.381 0.00 0.00 0.00 4.35 F
3981 6933 0.398664 AGGCCTATCTAGGGTTGCGT 60.399 55.000 1.29 0.00 43.82 5.24 F
4451 7405 0.478072 AGGAACCACCAACATCAGCA 59.522 50.000 0.00 0.00 42.04 4.41 F
4490 7444 1.318576 ACCAAAGCTTTCCAAGTCCG 58.681 50.000 9.23 0.00 0.00 4.79 F
5659 8633 1.903877 CTCGTCCCCCTGCATTGAGT 61.904 60.000 0.00 0.00 0.00 3.41 F
7364 10761 0.111639 TGGGGAAGCTGTTAACACCC 59.888 55.000 19.25 19.25 37.20 4.61 F
7973 11375 0.599558 CATGTTTGGACACCAGCCAG 59.400 55.000 0.00 0.00 38.91 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 4547 0.106335 TCCGTCTAGGGCTCGACTAG 59.894 60.000 2.85 2.85 41.52 2.57 R
1942 4779 0.108186 GTAAAATGGCAAGGCAGGGC 60.108 55.000 2.05 0.00 0.00 5.19 R
2001 4843 0.179020 CCCTGCAACCACAGAAGACA 60.179 55.000 0.00 0.00 40.25 3.41 R
2662 5537 0.804933 CAGTTCCGGCGGTTACTAGC 60.805 60.000 27.32 8.16 0.00 3.42 R
3569 6519 1.762957 ACCCTGGACATGTAATCTCCG 59.237 52.381 0.00 0.00 0.00 4.63 R
5058 8031 0.969149 ACTGTGCCGACTCATTCTGA 59.031 50.000 0.00 0.00 0.00 3.27 R
5642 8616 0.462047 GTACTCAATGCAGGGGGACG 60.462 60.000 0.00 0.00 0.00 4.79 R
5643 8617 0.618458 TGTACTCAATGCAGGGGGAC 59.382 55.000 0.00 0.00 0.00 4.46 R
5940 9262 1.078709 ACCGAGTGCATCAAATGTCG 58.921 50.000 0.00 0.00 0.00 4.35 R
7450 10847 0.320421 GAGAAGCCGTAACACTGCCA 60.320 55.000 0.00 0.00 0.00 4.92 R
8758 13481 0.036010 ATCCAGGAACACGCTTCCAG 60.036 55.000 13.53 6.57 41.00 3.86 R
9036 13862 0.234625 TGCTTTCGACATGCACGAAC 59.765 50.000 21.81 14.63 46.66 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
295 298 7.671495 ACATGCCAATTTTGAAGGAATTAAC 57.329 32.000 0.00 0.00 0.00 2.01
401 443 9.764870 CCATATTTGATCAATTTATACAGCTCG 57.235 33.333 9.40 0.00 0.00 5.03
503 699 0.101040 CAATAGCGCCAACCACCATG 59.899 55.000 2.29 0.00 0.00 3.66
542 738 2.579201 CCGCCGATGACCAAGACT 59.421 61.111 0.00 0.00 0.00 3.24
596 792 4.037446 TGCCACTATTGTGAAAAGTTGGAC 59.963 41.667 8.98 0.00 46.55 4.02
626 822 6.646240 GCAATTCTTAAGAGGCATCACAAAAA 59.354 34.615 16.39 0.00 0.00 1.94
680 1851 9.173939 GATTCTTAACTTGTGCACATAATATGC 57.826 33.333 22.39 3.73 43.68 3.14
681 1852 7.864108 TCTTAACTTGTGCACATAATATGCT 57.136 32.000 22.39 2.41 43.77 3.79
770 1947 0.650512 CTTGGCCTATGTTACGTGCG 59.349 55.000 3.32 0.00 0.00 5.34
781 1958 3.968837 TACGTGCGACCTCCCCCAT 62.969 63.158 0.00 0.00 0.00 4.00
849 2028 1.005690 GACCCCCTACCTCCCCATT 59.994 63.158 0.00 0.00 0.00 3.16
873 2052 8.840833 TTGCCGCTCAAAACATTATATATAGA 57.159 30.769 0.00 0.00 0.00 1.98
874 2053 9.448438 TTGCCGCTCAAAACATTATATATAGAT 57.552 29.630 0.00 0.00 0.00 1.98
896 2075 2.608970 CTTACCTCACGGGCCCCATG 62.609 65.000 18.66 15.76 39.10 3.66
904 2083 2.828549 GGGCCCCATGCTAACACG 60.829 66.667 12.23 0.00 40.92 4.49
923 2102 1.102809 GCATGAATCCGCCATCACCA 61.103 55.000 0.00 0.00 0.00 4.17
926 2105 1.077787 GAATCCGCCATCACCACCA 60.078 57.895 0.00 0.00 0.00 4.17
938 2117 3.182263 CCACCAACCCCCACCTCA 61.182 66.667 0.00 0.00 0.00 3.86
941 2120 0.701731 CACCAACCCCCACCTCATAA 59.298 55.000 0.00 0.00 0.00 1.90
966 2145 5.071519 CCATATCACTCCACTCATCCTTCTT 59.928 44.000 0.00 0.00 0.00 2.52
975 2154 0.546747 TCATCCTTCTTCGGGGTGGT 60.547 55.000 0.00 0.00 35.77 4.16
982 2161 2.838693 TTCGGGGTGGTGTGTCGA 60.839 61.111 0.00 0.00 0.00 4.20
1018 2197 2.198304 GATGGCCCTTCCTTCCACGT 62.198 60.000 0.00 0.00 33.98 4.49
1045 2263 1.977544 AACGGTGTAGCCTCGCTCT 60.978 57.895 0.00 0.00 40.44 4.09
1046 2264 1.533469 AACGGTGTAGCCTCGCTCTT 61.533 55.000 0.00 0.00 40.44 2.85
1047 2265 1.226717 CGGTGTAGCCTCGCTCTTC 60.227 63.158 0.00 0.00 40.44 2.87
1048 2266 1.142097 GGTGTAGCCTCGCTCTTCC 59.858 63.158 0.00 0.00 40.44 3.46
1049 2267 1.324005 GGTGTAGCCTCGCTCTTCCT 61.324 60.000 0.00 0.00 40.44 3.36
1050 2268 0.101579 GTGTAGCCTCGCTCTTCCTC 59.898 60.000 0.00 0.00 40.44 3.71
1051 2269 1.038130 TGTAGCCTCGCTCTTCCTCC 61.038 60.000 0.00 0.00 40.44 4.30
1052 2270 1.455959 TAGCCTCGCTCTTCCTCCC 60.456 63.158 0.00 0.00 40.44 4.30
1053 2271 2.930777 TAGCCTCGCTCTTCCTCCCC 62.931 65.000 0.00 0.00 40.44 4.81
1054 2272 2.042435 CCTCGCTCTTCCTCCCCT 60.042 66.667 0.00 0.00 0.00 4.79
1055 2273 2.131067 CCTCGCTCTTCCTCCCCTC 61.131 68.421 0.00 0.00 0.00 4.30
1056 2274 2.042843 TCGCTCTTCCTCCCCTCC 60.043 66.667 0.00 0.00 0.00 4.30
1057 2275 3.157949 CGCTCTTCCTCCCCTCCC 61.158 72.222 0.00 0.00 0.00 4.30
1058 2276 2.770475 GCTCTTCCTCCCCTCCCC 60.770 72.222 0.00 0.00 0.00 4.81
1059 2277 3.124088 CTCTTCCTCCCCTCCCCT 58.876 66.667 0.00 0.00 0.00 4.79
1060 2278 1.074850 CTCTTCCTCCCCTCCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
1061 2279 2.040359 CTTCCTCCCCTCCCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
1062 2280 3.707189 TTCCTCCCCTCCCCTCCC 61.707 72.222 0.00 0.00 0.00 4.30
1065 2283 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
1071 2289 4.431947 TCCCCTCCCCTCCCCCTA 62.432 72.222 0.00 0.00 0.00 3.53
1072 2290 4.188511 CCCCTCCCCTCCCCCTAC 62.189 77.778 0.00 0.00 0.00 3.18
1073 2291 4.188511 CCCTCCCCTCCCCCTACC 62.189 77.778 0.00 0.00 0.00 3.18
1074 2292 3.043404 CCTCCCCTCCCCCTACCT 61.043 72.222 0.00 0.00 0.00 3.08
1075 2293 1.707691 CCTCCCCTCCCCCTACCTA 60.708 68.421 0.00 0.00 0.00 3.08
1076 2294 1.547760 CTCCCCTCCCCCTACCTAC 59.452 68.421 0.00 0.00 0.00 3.18
1077 2295 1.231059 TCCCCTCCCCCTACCTACA 60.231 63.158 0.00 0.00 0.00 2.74
1078 2296 1.236282 CCCCTCCCCCTACCTACAG 59.764 68.421 0.00 0.00 0.00 2.74
1079 2297 1.600763 CCCCTCCCCCTACCTACAGT 61.601 65.000 0.00 0.00 0.00 3.55
1080 2298 0.105607 CCCTCCCCCTACCTACAGTC 60.106 65.000 0.00 0.00 0.00 3.51
1103 2321 4.280677 CCTTCATTTTGCCACCACTCTAAA 59.719 41.667 0.00 0.00 0.00 1.85
1130 3877 3.981212 AGGAGAGAGAGAGAAGAAAGGG 58.019 50.000 0.00 0.00 0.00 3.95
1145 3892 2.864208 AGGGAAAGGAAACGACCCT 58.136 52.632 0.00 0.00 43.48 4.34
1185 3932 0.250727 CTCCCGGAGAAAAAGCACCA 60.251 55.000 9.01 0.00 0.00 4.17
1236 3984 3.121030 CCAGAGCCGGAGCAAACG 61.121 66.667 5.05 0.00 43.56 3.60
1257 4005 1.675641 AGCCATGGCCGAAAGACAC 60.676 57.895 33.14 1.44 43.17 3.67
1258 4006 3.039202 GCCATGGCCGAAAGACACG 62.039 63.158 27.24 0.00 34.56 4.49
1280 4028 2.141535 AGGCGCTCTATCATCGTTTC 57.858 50.000 7.64 0.00 0.00 2.78
1324 4072 2.723124 CACAAACCCATGTGTTAGCC 57.277 50.000 0.00 0.00 44.46 3.93
1326 4074 2.562298 CACAAACCCATGTGTTAGCCAT 59.438 45.455 0.00 0.00 44.46 4.40
1327 4075 2.562298 ACAAACCCATGTGTTAGCCATG 59.438 45.455 0.00 0.00 39.50 3.66
1354 4110 8.980481 ACCTAATTTCCATATAAACTCAGGTG 57.020 34.615 0.00 0.00 31.20 4.00
1407 4166 1.923356 TCTCCCCAAGAAAATGCCAC 58.077 50.000 0.00 0.00 0.00 5.01
1410 4169 0.897621 CCCCAAGAAAATGCCACTCC 59.102 55.000 0.00 0.00 0.00 3.85
1411 4170 0.527565 CCCAAGAAAATGCCACTCCG 59.472 55.000 0.00 0.00 0.00 4.63
1412 4171 0.527565 CCAAGAAAATGCCACTCCGG 59.472 55.000 0.00 0.00 38.11 5.14
1413 4172 0.527565 CAAGAAAATGCCACTCCGGG 59.472 55.000 0.00 0.00 34.06 5.73
1414 4173 0.404040 AAGAAAATGCCACTCCGGGA 59.596 50.000 0.00 0.00 40.81 5.14
1508 4267 1.249407 AGGACGAGTCTTGACACTCC 58.751 55.000 3.09 6.19 39.90 3.85
1544 4303 2.755103 ACAAAATCCATCGGGCTTTCTC 59.245 45.455 0.00 0.00 31.47 2.87
1545 4304 2.058593 AAATCCATCGGGCTTTCTCC 57.941 50.000 0.00 0.00 26.06 3.71
1546 4305 1.216990 AATCCATCGGGCTTTCTCCT 58.783 50.000 0.00 0.00 0.00 3.69
1547 4306 0.761802 ATCCATCGGGCTTTCTCCTC 59.238 55.000 0.00 0.00 0.00 3.71
1548 4307 0.325671 TCCATCGGGCTTTCTCCTCT 60.326 55.000 0.00 0.00 0.00 3.69
1549 4308 0.105778 CCATCGGGCTTTCTCCTCTC 59.894 60.000 0.00 0.00 0.00 3.20
1843 4680 3.291383 CCCGCCGGAGCAAACAAA 61.291 61.111 5.05 0.00 39.83 2.83
1885 4722 2.432300 TTCCTCCGCGGGGATCTTC 61.432 63.158 31.01 0.00 42.83 2.87
1920 4757 2.238144 GTTGGTAACCCTAGGGAGAACC 59.762 54.545 35.38 31.50 38.96 3.62
1930 4767 4.455366 GGAGAACCCCGAGGAAGA 57.545 61.111 0.00 0.00 36.73 2.87
1932 4769 1.615165 GGAGAACCCCGAGGAAGACC 61.615 65.000 0.00 0.00 36.73 3.85
1933 4770 1.612739 AGAACCCCGAGGAAGACCC 60.613 63.158 0.00 0.00 36.73 4.46
1936 4773 4.772231 CCCCGAGGAAGACCCGGA 62.772 72.222 0.73 0.00 45.83 5.14
1989 4830 3.348119 TGTATTTTGTATGGCGCCTGAA 58.652 40.909 29.70 7.94 0.00 3.02
1990 4831 3.376859 TGTATTTTGTATGGCGCCTGAAG 59.623 43.478 29.70 0.00 0.00 3.02
1995 4836 0.394565 GTATGGCGCCTGAAGGATCT 59.605 55.000 29.70 3.34 37.39 2.75
1996 4837 0.394192 TATGGCGCCTGAAGGATCTG 59.606 55.000 29.70 0.00 37.39 2.90
2001 4843 1.342819 GCGCCTGAAGGATCTGTATCT 59.657 52.381 0.00 0.00 37.39 1.98
2004 4846 3.551863 CGCCTGAAGGATCTGTATCTGTC 60.552 52.174 0.00 0.00 37.39 3.51
2013 4859 4.404073 GGATCTGTATCTGTCTTCTGTGGT 59.596 45.833 0.00 0.00 32.29 4.16
2161 5007 2.285026 CCGCGTCGACAAGAATGTAATG 60.285 50.000 17.16 0.00 40.74 1.90
2163 5009 3.539592 CGCGTCGACAAGAATGTAATGAC 60.540 47.826 17.16 0.00 40.74 3.06
2172 5018 2.143925 GAATGTAATGACGCCCTAGCC 58.856 52.381 0.00 0.00 34.57 3.93
2191 5037 3.149981 GCCTTTCTAGTTTGGTTCTGCT 58.850 45.455 0.00 0.00 0.00 4.24
2206 5067 0.322975 CTGCTGTGCCCTGAACTACT 59.677 55.000 0.00 0.00 0.00 2.57
2218 5079 4.256920 CCTGAACTACTTGCAAGTGCTAT 58.743 43.478 36.50 21.75 40.07 2.97
2246 5107 4.331168 GCTATAGTCCTGTTTGTGCTCAAG 59.669 45.833 0.84 0.00 34.88 3.02
2257 5118 2.846193 TGTGCTCAAGTCCCTGTTAAC 58.154 47.619 0.00 0.00 0.00 2.01
2263 5124 4.310769 CTCAAGTCCCTGTTAACTGTCAG 58.689 47.826 7.22 0.00 0.00 3.51
2265 5126 4.163458 TCAAGTCCCTGTTAACTGTCAGTT 59.837 41.667 21.48 21.48 41.97 3.16
2279 5140 6.919775 ACTGTCAGTTCCTGTATTTAGAGT 57.080 37.500 0.00 0.00 32.61 3.24
2285 5146 6.037098 CAGTTCCTGTATTTAGAGTCGGAAG 58.963 44.000 0.00 0.00 30.47 3.46
2287 5148 6.436532 AGTTCCTGTATTTAGAGTCGGAAGAA 59.563 38.462 0.00 0.00 45.01 2.52
2297 5164 4.608951 AGAGTCGGAAGAACGCATATTAC 58.391 43.478 0.00 0.00 45.01 1.89
2322 5189 3.947196 TGTGCAGTGTTTTCTGATGAACT 59.053 39.130 0.00 0.00 37.61 3.01
2323 5190 5.007626 GTGTGCAGTGTTTTCTGATGAACTA 59.992 40.000 0.00 0.00 37.61 2.24
2324 5191 5.588246 TGTGCAGTGTTTTCTGATGAACTAA 59.412 36.000 0.00 0.00 37.61 2.24
2325 5192 6.262944 TGTGCAGTGTTTTCTGATGAACTAAT 59.737 34.615 0.00 0.00 37.61 1.73
2326 5193 7.141363 GTGCAGTGTTTTCTGATGAACTAATT 58.859 34.615 0.00 0.00 37.61 1.40
2327 5194 7.113965 GTGCAGTGTTTTCTGATGAACTAATTG 59.886 37.037 0.00 0.00 37.61 2.32
2328 5195 6.583806 GCAGTGTTTTCTGATGAACTAATTGG 59.416 38.462 0.00 0.00 37.61 3.16
2329 5196 7.086376 CAGTGTTTTCTGATGAACTAATTGGG 58.914 38.462 0.00 0.00 37.61 4.12
2489 5358 4.841443 ACCGTATCCTTTTGTTTGTTCC 57.159 40.909 0.00 0.00 0.00 3.62
2531 5400 9.423061 ACAAAGTTTTATTATTGAACCATCTGC 57.577 29.630 0.00 0.00 0.00 4.26
2603 5472 8.653338 GTCGTATTGAAGTTGCTTAGAAATACA 58.347 33.333 14.67 0.00 31.34 2.29
2607 5476 8.728088 ATTGAAGTTGCTTAGAAATACAAACG 57.272 30.769 0.00 0.00 0.00 3.60
2634 5503 8.424133 AGAACCTCAAATCATTGTAAGCTTTTT 58.576 29.630 3.20 0.00 37.79 1.94
2635 5508 8.593492 AACCTCAAATCATTGTAAGCTTTTTC 57.407 30.769 3.20 0.00 37.79 2.29
2715 5598 6.000246 TGATGCAATAATAGGAGGTTGTCA 58.000 37.500 0.00 0.00 0.00 3.58
2740 5628 5.505173 AGTTGTTGGTTTCTGTCATTCAG 57.495 39.130 0.00 0.00 44.85 3.02
2779 5694 8.581578 TGCAATATTCGTATACCTGTTCATCTA 58.418 33.333 0.00 0.00 0.00 1.98
2801 5716 8.268850 TCTAGACACTTTAATGGATGCTTTTC 57.731 34.615 0.00 0.00 0.00 2.29
3005 5931 4.378774 AGTCAGATATGTCATTGCTCTGC 58.621 43.478 11.88 8.86 34.66 4.26
3132 6066 4.851639 AATTAAGTCTGCATCCACCTCT 57.148 40.909 0.00 0.00 0.00 3.69
3141 6075 1.667724 GCATCCACCTCTCAAATGTCG 59.332 52.381 0.00 0.00 0.00 4.35
3201 6135 5.110598 TGCACATTCCATAATGAACATTGC 58.889 37.500 9.87 4.83 44.50 3.56
3228 6162 5.876357 ACACAAGGAGGCTGAAAATAGTTA 58.124 37.500 0.00 0.00 0.00 2.24
3345 6294 2.359230 GCAGAGGCACTGGTGACC 60.359 66.667 13.83 0.00 45.82 4.02
3364 6313 6.183360 GGTGACCAGTCAGAGTTATATGCTTA 60.183 42.308 0.00 0.00 40.75 3.09
3530 6480 9.051679 GCCTTATGAACCTTTTACATTTTTGTT 57.948 29.630 0.00 0.00 0.00 2.83
3980 6932 1.629043 TAGGCCTATCTAGGGTTGCG 58.371 55.000 8.91 0.00 43.82 4.85
3981 6933 0.398664 AGGCCTATCTAGGGTTGCGT 60.399 55.000 1.29 0.00 43.82 5.24
3983 6935 1.272769 GGCCTATCTAGGGTTGCGTAG 59.727 57.143 0.00 0.00 43.82 3.51
3995 6949 4.755123 AGGGTTGCGTAGATACATTAATGC 59.245 41.667 15.48 0.00 0.00 3.56
4156 7110 1.441729 CTTCCGGCGCTATTCCTCA 59.558 57.895 7.64 0.00 0.00 3.86
4201 7155 9.578439 GTTATCATTTTCTTCCTCATCTTTTGG 57.422 33.333 0.00 0.00 0.00 3.28
4348 7302 2.753296 TGCAGCTGGTTTATTTGTTGC 58.247 42.857 17.12 0.00 37.21 4.17
4370 7324 7.719778 TGCTTGTCAATAGCACTAATATCTG 57.280 36.000 0.00 0.00 43.30 2.90
4451 7405 0.478072 AGGAACCACCAACATCAGCA 59.522 50.000 0.00 0.00 42.04 4.41
4490 7444 1.318576 ACCAAAGCTTTCCAAGTCCG 58.681 50.000 9.23 0.00 0.00 4.79
4635 7598 3.935828 GGTTGACCTTTGACAGAGATAGC 59.064 47.826 0.00 0.00 0.00 2.97
4780 7748 7.452562 ACTGAACATTTGAAATTTGCCCTTAT 58.547 30.769 0.00 0.00 0.00 1.73
4782 7750 8.097078 TGAACATTTGAAATTTGCCCTTATTG 57.903 30.769 0.00 0.00 0.00 1.90
4902 7871 7.062839 TGCAGTTTTGTGTCTGTTAAATTGTTC 59.937 33.333 0.00 0.00 34.57 3.18
4945 7916 2.936498 ACAACCGAAGAGATAAATGCGG 59.064 45.455 0.00 0.00 43.95 5.69
5215 8188 5.630680 CACAAGTGATTCACATGGTTTAAGC 59.369 40.000 22.00 0.00 37.38 3.09
5324 8297 6.772233 CCAATCATGGTTCAGGTGATGTATTA 59.228 38.462 0.00 0.00 42.18 0.98
5522 8495 7.936847 GGTGTCAATATTCATGGTGGTAAGATA 59.063 37.037 0.00 0.00 0.00 1.98
5620 8594 7.657761 CAGGTGACCTTCTTATGGTGTATTATC 59.342 40.741 0.00 0.00 38.03 1.75
5621 8595 7.569111 AGGTGACCTTCTTATGGTGTATTATCT 59.431 37.037 0.00 0.00 38.03 1.98
5622 8596 8.867097 GGTGACCTTCTTATGGTGTATTATCTA 58.133 37.037 0.00 0.00 38.03 1.98
5659 8633 1.903877 CTCGTCCCCCTGCATTGAGT 61.904 60.000 0.00 0.00 0.00 3.41
5781 9103 9.520515 AGATATGTTTCTAAACCTTGTGATTGT 57.479 29.630 3.27 0.00 38.11 2.71
5784 9106 7.581213 TGTTTCTAAACCTTGTGATTGTCAT 57.419 32.000 3.27 0.00 38.11 3.06
5785 9107 8.006298 TGTTTCTAAACCTTGTGATTGTCATT 57.994 30.769 3.27 0.00 38.11 2.57
5786 9108 8.134895 TGTTTCTAAACCTTGTGATTGTCATTC 58.865 33.333 3.27 0.00 38.11 2.67
5788 9110 8.408043 TTCTAAACCTTGTGATTGTCATTCAT 57.592 30.769 0.98 0.00 0.00 2.57
5789 9111 8.044060 TCTAAACCTTGTGATTGTCATTCATC 57.956 34.615 0.98 0.00 0.00 2.92
5790 9112 4.952262 ACCTTGTGATTGTCATTCATCG 57.048 40.909 0.98 0.00 0.00 3.84
5791 9113 4.578871 ACCTTGTGATTGTCATTCATCGA 58.421 39.130 0.98 0.00 0.00 3.59
5792 9114 5.003160 ACCTTGTGATTGTCATTCATCGAA 58.997 37.500 0.98 0.00 0.00 3.71
5793 9115 5.473162 ACCTTGTGATTGTCATTCATCGAAA 59.527 36.000 0.98 0.00 0.00 3.46
5794 9116 6.016360 ACCTTGTGATTGTCATTCATCGAAAA 60.016 34.615 0.98 0.00 0.00 2.29
5795 9117 7.031372 CCTTGTGATTGTCATTCATCGAAAAT 58.969 34.615 0.98 0.00 0.00 1.82
5796 9118 7.219535 CCTTGTGATTGTCATTCATCGAAAATC 59.780 37.037 0.98 0.00 37.54 2.17
5797 9119 7.143514 TGTGATTGTCATTCATCGAAAATCA 57.856 32.000 2.36 2.36 42.29 2.57
5798 9120 7.592051 TGTGATTGTCATTCATCGAAAATCAA 58.408 30.769 7.21 0.00 44.69 2.57
5799 9121 8.081025 TGTGATTGTCATTCATCGAAAATCAAA 58.919 29.630 7.21 0.58 44.69 2.69
5800 9122 8.914654 GTGATTGTCATTCATCGAAAATCAAAA 58.085 29.630 7.21 0.00 44.69 2.44
5801 9123 9.642327 TGATTGTCATTCATCGAAAATCAAAAT 57.358 25.926 3.78 0.00 41.82 1.82
5803 9125 9.642327 ATTGTCATTCATCGAAAATCAAAATCA 57.358 25.926 0.00 0.00 0.00 2.57
5804 9126 9.642327 TTGTCATTCATCGAAAATCAAAATCAT 57.358 25.926 0.00 0.00 0.00 2.45
5810 9132 9.773328 TTCATCGAAAATCAAAATCATACAGAC 57.227 29.630 0.00 0.00 0.00 3.51
5811 9133 8.945057 TCATCGAAAATCAAAATCATACAGACA 58.055 29.630 0.00 0.00 0.00 3.41
5812 9134 9.218359 CATCGAAAATCAAAATCATACAGACAG 57.782 33.333 0.00 0.00 0.00 3.51
5813 9135 7.751732 TCGAAAATCAAAATCATACAGACAGG 58.248 34.615 0.00 0.00 0.00 4.00
5814 9136 7.606073 TCGAAAATCAAAATCATACAGACAGGA 59.394 33.333 0.00 0.00 0.00 3.86
5815 9137 8.236586 CGAAAATCAAAATCATACAGACAGGAA 58.763 33.333 0.00 0.00 0.00 3.36
5816 9138 9.912634 GAAAATCAAAATCATACAGACAGGAAA 57.087 29.630 0.00 0.00 0.00 3.13
5818 9140 9.918630 AAATCAAAATCATACAGACAGGAAAAG 57.081 29.630 0.00 0.00 0.00 2.27
5819 9141 8.868522 ATCAAAATCATACAGACAGGAAAAGA 57.131 30.769 0.00 0.00 0.00 2.52
5820 9142 8.690203 TCAAAATCATACAGACAGGAAAAGAA 57.310 30.769 0.00 0.00 0.00 2.52
5821 9143 9.130661 TCAAAATCATACAGACAGGAAAAGAAA 57.869 29.630 0.00 0.00 0.00 2.52
5822 9144 9.748708 CAAAATCATACAGACAGGAAAAGAAAA 57.251 29.630 0.00 0.00 0.00 2.29
5824 9146 9.750125 AAATCATACAGACAGGAAAAGAAAAAC 57.250 29.630 0.00 0.00 0.00 2.43
5825 9147 6.954944 TCATACAGACAGGAAAAGAAAAACG 58.045 36.000 0.00 0.00 0.00 3.60
5826 9148 6.764085 TCATACAGACAGGAAAAGAAAAACGA 59.236 34.615 0.00 0.00 0.00 3.85
5827 9149 5.890424 ACAGACAGGAAAAGAAAAACGAA 57.110 34.783 0.00 0.00 0.00 3.85
5828 9150 6.451064 ACAGACAGGAAAAGAAAAACGAAT 57.549 33.333 0.00 0.00 0.00 3.34
5829 9151 6.863275 ACAGACAGGAAAAGAAAAACGAATT 58.137 32.000 0.00 0.00 0.00 2.17
5830 9152 7.320399 ACAGACAGGAAAAGAAAAACGAATTT 58.680 30.769 0.00 0.00 0.00 1.82
5831 9153 7.488150 ACAGACAGGAAAAGAAAAACGAATTTC 59.512 33.333 8.85 8.85 39.16 2.17
5833 9155 8.899771 AGACAGGAAAAGAAAAACGAATTTCTA 58.100 29.630 16.51 0.00 46.25 2.10
5834 9156 9.678941 GACAGGAAAAGAAAAACGAATTTCTAT 57.321 29.630 16.51 10.94 46.25 1.98
5835 9157 9.678941 ACAGGAAAAGAAAAACGAATTTCTATC 57.321 29.630 16.51 16.26 46.25 2.08
5836 9158 9.677567 CAGGAAAAGAAAAACGAATTTCTATCA 57.322 29.630 16.51 0.00 46.25 2.15
5859 9181 9.933240 ATCAAATCAATAGAAGAAAGGATCCTT 57.067 29.630 21.89 21.89 37.98 3.36
5871 9193 4.953781 AAGGATCCTTTCCCTGATTTGA 57.046 40.909 21.89 0.00 46.81 2.69
5872 9194 4.953781 AGGATCCTTTCCCTGATTTGAA 57.046 40.909 9.02 0.00 46.81 2.69
5873 9195 5.478503 AGGATCCTTTCCCTGATTTGAAT 57.521 39.130 9.02 0.00 46.81 2.57
5874 9196 5.453158 AGGATCCTTTCCCTGATTTGAATC 58.547 41.667 9.02 0.00 46.81 2.52
5875 9197 4.586421 GGATCCTTTCCCTGATTTGAATCC 59.414 45.833 3.84 0.00 38.75 3.01
5876 9198 4.953781 TCCTTTCCCTGATTTGAATCCT 57.046 40.909 1.56 0.00 34.50 3.24
5877 9199 4.603131 TCCTTTCCCTGATTTGAATCCTG 58.397 43.478 1.56 0.00 34.50 3.86
5940 9262 5.403466 GCTTCCAAATGTCATTTGTGTTCTC 59.597 40.000 28.23 13.68 46.22 2.87
5978 9301 2.487532 GGGGAGCACATGCAGCATC 61.488 63.158 4.38 0.00 45.16 3.91
6041 9364 3.496130 GTGTTGTGTCTCTTGGATGACAG 59.504 47.826 0.00 0.00 42.84 3.51
6045 9368 5.745312 TGTGTCTCTTGGATGACAGTTAT 57.255 39.130 0.00 0.00 42.84 1.89
6258 9639 2.747855 CTCAAGGAGGCAACCCGC 60.748 66.667 0.00 0.00 41.28 6.13
6397 9787 2.918712 CAGTCAACTGGTCCTCAAGT 57.081 50.000 2.08 0.00 40.20 3.16
6399 9789 3.134458 CAGTCAACTGGTCCTCAAGTTC 58.866 50.000 2.08 0.00 40.20 3.01
6428 9818 0.679002 CAGTGGGCAATGGGTCTCAG 60.679 60.000 0.00 0.00 0.00 3.35
6438 9828 0.690192 TGGGTCTCAGCCAAATTCGA 59.310 50.000 0.00 0.00 43.74 3.71
6676 10069 2.514824 GCTGCCGGGTTCTCATCC 60.515 66.667 2.18 0.00 0.00 3.51
6702 10095 2.825086 AACTTCACTGAACGTGCAAC 57.175 45.000 0.00 0.00 43.46 4.17
6742 10135 6.866770 GCAGGTATTTCTTTTTGAAGTAACCC 59.133 38.462 0.00 0.00 35.83 4.11
6786 10180 1.132640 GCACTGAATCGTTCACCGC 59.867 57.895 0.00 0.64 35.46 5.68
6800 10194 1.689813 TCACCGCTCCTGTTTCTGTTA 59.310 47.619 0.00 0.00 0.00 2.41
6834 10228 5.957842 TTTAGGTACTGTGCCTTCAAATG 57.042 39.130 22.52 0.00 41.52 2.32
6881 10275 5.163405 ACAAGACATCAGTACTGTGAGTGTT 60.163 40.000 21.99 18.27 0.00 3.32
6958 10352 1.016130 GGACAGATGACAGGCACACG 61.016 60.000 0.00 0.00 0.00 4.49
7016 10410 1.163554 CTGAACTGAAGAGCAAGCCC 58.836 55.000 0.00 0.00 0.00 5.19
7019 10413 0.321122 AACTGAAGAGCAAGCCCTCG 60.321 55.000 0.00 0.00 36.95 4.63
7073 10467 2.923035 AGTGGTGGGTCTGGTCCG 60.923 66.667 0.00 0.00 0.00 4.79
7091 10485 1.152756 GCTTGGTCTTGGTGGTGGT 60.153 57.895 0.00 0.00 0.00 4.16
7154 10551 5.203060 AGTCCTACAGTCTCACAAACTTC 57.797 43.478 0.00 0.00 0.00 3.01
7175 10572 5.910637 TCATTGCTCAAAAGTTTGCATTC 57.089 34.783 0.47 0.00 38.05 2.67
7180 10577 5.177326 TGCTCAAAAGTTTGCATTCTGTTT 58.823 33.333 0.00 0.00 38.05 2.83
7181 10578 5.291614 TGCTCAAAAGTTTGCATTCTGTTTC 59.708 36.000 0.00 0.00 38.05 2.78
7182 10579 5.521372 GCTCAAAAGTTTGCATTCTGTTTCT 59.479 36.000 0.00 0.00 38.05 2.52
7183 10580 6.509039 GCTCAAAAGTTTGCATTCTGTTTCTG 60.509 38.462 0.00 0.00 38.05 3.02
7184 10581 6.397272 TCAAAAGTTTGCATTCTGTTTCTGT 58.603 32.000 0.00 0.00 38.05 3.41
7201 10598 6.433716 TGTTTCTGTCAATGATTTCCTGCATA 59.566 34.615 0.00 0.00 0.00 3.14
7231 10628 6.636850 CCTAGTGCTTGTAATTTGTTGTTGTC 59.363 38.462 0.00 0.00 0.00 3.18
7288 10685 8.408601 AGAGAACAATGCCATTGATTATGTTAC 58.591 33.333 23.56 5.59 42.83 2.50
7364 10761 0.111639 TGGGGAAGCTGTTAACACCC 59.888 55.000 19.25 19.25 37.20 4.61
7398 10795 0.990374 AGCCAGGAAGCTGTTCTGAT 59.010 50.000 11.38 0.09 42.95 2.90
7443 10840 4.022849 GCTTGTTTCAAGAGGTGCTAATGT 60.023 41.667 12.77 0.00 0.00 2.71
7470 10867 1.019805 GGCAGTGTTACGGCTTCTCC 61.020 60.000 4.26 0.00 39.29 3.71
7511 10908 1.378119 TCTGCTGCTGGAATGCCTG 60.378 57.895 6.69 0.00 36.29 4.85
7678 11075 1.151777 ACTTGACACAGAACCGTGCG 61.152 55.000 0.00 0.00 40.73 5.34
7912 11313 3.972403 ACGCCATCCTGTTTAACAAAAC 58.028 40.909 0.00 0.00 0.00 2.43
7934 11335 5.608449 ACACTAAAGTTGGTAGGTCAGTTC 58.392 41.667 0.00 0.00 0.00 3.01
7939 11340 6.594788 AAAGTTGGTAGGTCAGTTCGTATA 57.405 37.500 0.00 0.00 0.00 1.47
7973 11375 0.599558 CATGTTTGGACACCAGCCAG 59.400 55.000 0.00 0.00 38.91 4.85
8000 11402 4.606961 TCGGAGAGTTGAAAAATGTTTGC 58.393 39.130 0.00 0.00 0.00 3.68
8305 11707 7.377696 TGTTCCCTACAACCTCTAGTTTTTA 57.622 36.000 0.00 0.00 36.18 1.52
8306 11708 7.804147 TGTTCCCTACAACCTCTAGTTTTTAA 58.196 34.615 0.00 0.00 36.18 1.52
8309 11711 9.871175 TTCCCTACAACCTCTAGTTTTTAAAAT 57.129 29.630 0.55 0.00 36.18 1.82
8318 11720 9.150028 ACCTCTAGTTTTTAAAATAAGCCCAAA 57.850 29.630 0.55 0.00 0.00 3.28
8446 11852 6.069088 ACATGAGTTTGTTATGAGGGGGATTA 60.069 38.462 0.00 0.00 0.00 1.75
8448 11854 6.601332 TGAGTTTGTTATGAGGGGGATTATC 58.399 40.000 0.00 0.00 0.00 1.75
8555 11961 1.038130 AGAGGGTGGAGTCCGAATCG 61.038 60.000 4.30 0.00 0.00 3.34
8665 13380 8.540492 GTGGTGAAAACATATATACAGAACTCG 58.460 37.037 0.00 0.00 0.00 4.18
8758 13481 4.125703 AGACATGCACATAGCTAGCTTTC 58.874 43.478 24.88 8.33 45.94 2.62
8759 13482 4.125703 GACATGCACATAGCTAGCTTTCT 58.874 43.478 24.88 5.39 45.94 2.52
8764 13487 3.559242 GCACATAGCTAGCTTTCTGGAAG 59.441 47.826 24.88 12.76 41.15 3.46
8815 13550 3.189702 ACCGACGACATTTAATTGTTGGG 59.810 43.478 17.80 13.51 38.82 4.12
8834 13569 2.472816 GGCATTGCGATTTATGTTGGG 58.527 47.619 1.91 0.00 0.00 4.12
8844 13579 4.211374 CGATTTATGTTGGGACTCGGATTC 59.789 45.833 0.00 0.00 0.00 2.52
8866 13629 1.608590 CCGCTGTTGTGGTTCTGATTT 59.391 47.619 0.00 0.00 38.95 2.17
8907 13709 9.669887 TTAGTAGGATAATTTTCTTTTACGCCA 57.330 29.630 0.00 0.00 0.00 5.69
8908 13710 8.209917 AGTAGGATAATTTTCTTTTACGCCAG 57.790 34.615 0.00 0.00 0.00 4.85
8909 13711 5.891451 AGGATAATTTTCTTTTACGCCAGC 58.109 37.500 0.00 0.00 0.00 4.85
8910 13712 5.417580 AGGATAATTTTCTTTTACGCCAGCA 59.582 36.000 0.00 0.00 0.00 4.41
8911 13713 5.743872 GGATAATTTTCTTTTACGCCAGCAG 59.256 40.000 0.00 0.00 0.00 4.24
8912 13714 4.846779 AATTTTCTTTTACGCCAGCAGA 57.153 36.364 0.00 0.00 0.00 4.26
8913 13715 3.896648 TTTTCTTTTACGCCAGCAGAG 57.103 42.857 0.00 0.00 0.00 3.35
8914 13716 1.156736 TTCTTTTACGCCAGCAGAGC 58.843 50.000 0.00 0.00 0.00 4.09
8915 13717 0.673644 TCTTTTACGCCAGCAGAGCC 60.674 55.000 0.00 0.00 0.00 4.70
8916 13718 1.970917 CTTTTACGCCAGCAGAGCCG 61.971 60.000 0.00 0.00 0.00 5.52
8917 13719 2.443260 TTTTACGCCAGCAGAGCCGA 62.443 55.000 0.00 0.00 0.00 5.54
8918 13720 2.835701 TTTACGCCAGCAGAGCCGAG 62.836 60.000 0.00 0.00 0.00 4.63
8920 13722 4.441695 CGCCAGCAGAGCCGAGAA 62.442 66.667 0.00 0.00 0.00 2.87
8921 13723 2.046892 GCCAGCAGAGCCGAGAAA 60.047 61.111 0.00 0.00 0.00 2.52
8922 13724 2.394563 GCCAGCAGAGCCGAGAAAC 61.395 63.158 0.00 0.00 0.00 2.78
8923 13725 1.004560 CCAGCAGAGCCGAGAAACA 60.005 57.895 0.00 0.00 0.00 2.83
8924 13726 0.392193 CCAGCAGAGCCGAGAAACAT 60.392 55.000 0.00 0.00 0.00 2.71
8925 13727 1.005340 CAGCAGAGCCGAGAAACATC 58.995 55.000 0.00 0.00 0.00 3.06
8926 13728 0.610174 AGCAGAGCCGAGAAACATCA 59.390 50.000 0.00 0.00 0.00 3.07
8927 13729 0.723981 GCAGAGCCGAGAAACATCAC 59.276 55.000 0.00 0.00 0.00 3.06
8928 13730 1.674221 GCAGAGCCGAGAAACATCACT 60.674 52.381 0.00 0.00 0.00 3.41
8929 13731 2.266554 CAGAGCCGAGAAACATCACTC 58.733 52.381 0.00 0.00 0.00 3.51
8938 13740 1.725164 GAAACATCACTCGGTTCGGTC 59.275 52.381 0.00 0.00 0.00 4.79
8943 13745 4.353437 ACTCGGTTCGGTCGGTGC 62.353 66.667 0.00 0.00 0.00 5.01
8948 13750 3.400590 GTTCGGTCGGTGCGTCAC 61.401 66.667 1.92 1.92 0.00 3.67
8950 13752 3.427598 TTCGGTCGGTGCGTCACAA 62.428 57.895 11.20 0.00 35.86 3.33
8965 13791 2.810852 GTCACAAAGCTCTCCTTCCTTG 59.189 50.000 0.00 0.00 31.99 3.61
8986 13812 2.674220 CCACTTGCTCCTCCCTCCC 61.674 68.421 0.00 0.00 0.00 4.30
8994 13820 1.813102 CTCCTCCCTCCCATAGCTTT 58.187 55.000 0.00 0.00 0.00 3.51
8995 13821 1.419387 CTCCTCCCTCCCATAGCTTTG 59.581 57.143 0.00 0.00 0.00 2.77
8997 13823 0.179006 CTCCCTCCCATAGCTTTGCC 60.179 60.000 0.00 0.00 0.00 4.52
9036 13862 1.644786 GGATTTTGGCGACGACCAGG 61.645 60.000 0.00 0.00 41.82 4.45
9062 13893 1.941209 GCATGTCGAAAGCACTCCTCA 60.941 52.381 0.00 0.00 0.00 3.86
9105 14323 2.668632 GGATCCGTGGCACCTCAA 59.331 61.111 12.86 0.00 0.00 3.02
9111 14329 1.106944 CCGTGGCACCTCAAAAACCT 61.107 55.000 12.86 0.00 0.00 3.50
9117 14335 3.181467 TGGCACCTCAAAAACCTGATTTG 60.181 43.478 0.00 0.00 38.76 2.32
9123 14341 4.517453 CCTCAAAAACCTGATTTGTACCGA 59.483 41.667 0.00 0.00 38.57 4.69
9153 14371 0.468226 AGCCCTGTCAAGTGTTCGAA 59.532 50.000 0.00 0.00 0.00 3.71
9156 14384 0.868406 CCTGTCAAGTGTTCGAAGCC 59.132 55.000 0.00 0.00 0.00 4.35
9163 14391 4.028490 TGTTCGAAGCCGCCCCAT 62.028 61.111 0.00 0.00 35.37 4.00
9215 18548 0.837691 TTGAGCCTCTGGAGCTTGGA 60.838 55.000 0.00 0.00 41.75 3.53
9217 18550 1.343377 TGAGCCTCTGGAGCTTGGATA 60.343 52.381 0.00 0.00 41.75 2.59
9218 18551 1.344114 GAGCCTCTGGAGCTTGGATAG 59.656 57.143 0.00 0.00 41.75 2.08
9219 18552 1.127343 GCCTCTGGAGCTTGGATAGT 58.873 55.000 0.00 0.00 0.00 2.12
9220 18553 1.488393 GCCTCTGGAGCTTGGATAGTT 59.512 52.381 0.00 0.00 0.00 2.24
9221 18554 2.744494 GCCTCTGGAGCTTGGATAGTTG 60.744 54.545 0.00 0.00 0.00 3.16
9222 18555 2.158842 CCTCTGGAGCTTGGATAGTTGG 60.159 54.545 0.00 0.00 0.00 3.77
9223 18556 1.839994 TCTGGAGCTTGGATAGTTGGG 59.160 52.381 0.00 0.00 0.00 4.12
9224 18557 1.561542 CTGGAGCTTGGATAGTTGGGT 59.438 52.381 0.00 0.00 0.00 4.51
9225 18558 2.771943 CTGGAGCTTGGATAGTTGGGTA 59.228 50.000 0.00 0.00 0.00 3.69
9226 18559 3.392616 CTGGAGCTTGGATAGTTGGGTAT 59.607 47.826 0.00 0.00 0.00 2.73
9227 18560 3.391296 TGGAGCTTGGATAGTTGGGTATC 59.609 47.826 0.00 0.00 0.00 2.24
9228 18561 3.391296 GGAGCTTGGATAGTTGGGTATCA 59.609 47.826 0.00 0.00 31.87 2.15
9229 18562 4.381411 GAGCTTGGATAGTTGGGTATCAC 58.619 47.826 0.00 0.00 31.87 3.06
9230 18563 4.040755 AGCTTGGATAGTTGGGTATCACT 58.959 43.478 0.00 0.00 31.87 3.41
9231 18564 4.101741 AGCTTGGATAGTTGGGTATCACTC 59.898 45.833 0.00 0.00 31.87 3.51
9232 18565 4.101741 GCTTGGATAGTTGGGTATCACTCT 59.898 45.833 0.00 0.00 31.87 3.24
9233 18566 5.605534 CTTGGATAGTTGGGTATCACTCTG 58.394 45.833 0.00 0.00 31.87 3.35
9234 18567 3.967326 TGGATAGTTGGGTATCACTCTGG 59.033 47.826 0.00 0.00 31.87 3.86
9235 18568 3.967987 GGATAGTTGGGTATCACTCTGGT 59.032 47.826 0.00 0.00 31.87 4.00
9236 18569 4.039366 GGATAGTTGGGTATCACTCTGGTC 59.961 50.000 0.00 0.00 31.87 4.02
9237 18570 3.191888 AGTTGGGTATCACTCTGGTCT 57.808 47.619 0.00 0.00 0.00 3.85
9238 18571 3.100671 AGTTGGGTATCACTCTGGTCTC 58.899 50.000 0.00 0.00 0.00 3.36
9239 18572 2.832129 GTTGGGTATCACTCTGGTCTCA 59.168 50.000 0.00 0.00 0.00 3.27
9249 18582 0.250901 TCTGGTCTCAAAAGGGCAGC 60.251 55.000 0.00 0.00 0.00 5.25
9279 18612 9.620259 AAAGCATTGTTTAATTGGAGGTTAAAA 57.380 25.926 0.00 0.00 34.05 1.52
9290 18623 8.637196 AATTGGAGGTTAAAACTCTTTAGAGG 57.363 34.615 11.23 0.00 46.13 3.69
9328 18706 9.551734 CTCAATCATAGATGGTTCATTTCTACA 57.448 33.333 0.00 0.00 0.00 2.74
9332 18710 8.681486 TCATAGATGGTTCATTTCTACAATGG 57.319 34.615 0.00 0.00 0.00 3.16
9333 18711 8.493607 TCATAGATGGTTCATTTCTACAATGGA 58.506 33.333 0.00 0.00 0.00 3.41
9335 18713 7.814264 AGATGGTTCATTTCTACAATGGATC 57.186 36.000 0.00 0.00 0.00 3.36
9342 18747 7.776933 TCATTTCTACAATGGATCTTCTTCG 57.223 36.000 0.00 0.00 0.00 3.79
9357 18762 3.887621 TCTTCGGATTTTCAGGTCGAT 57.112 42.857 0.00 0.00 0.00 3.59
9361 18766 1.665679 CGGATTTTCAGGTCGATGTGG 59.334 52.381 0.00 0.00 0.00 4.17
9375 18780 2.034221 GTGGGTGAGGCCAGGAAC 59.966 66.667 5.01 0.00 39.65 3.62
9376 18781 2.121963 TGGGTGAGGCCAGGAACT 60.122 61.111 5.01 0.00 43.88 3.01
9377 18782 2.224159 TGGGTGAGGCCAGGAACTC 61.224 63.158 5.01 0.00 34.60 3.01
9469 18874 3.269178 CTCATCTTCTCAAACCCTCTGC 58.731 50.000 0.00 0.00 0.00 4.26
9470 18875 2.909006 TCATCTTCTCAAACCCTCTGCT 59.091 45.455 0.00 0.00 0.00 4.24
9471 18876 2.847327 TCTTCTCAAACCCTCTGCTG 57.153 50.000 0.00 0.00 0.00 4.41
9472 18877 1.163554 CTTCTCAAACCCTCTGCTGC 58.836 55.000 0.00 0.00 0.00 5.25
9473 18878 0.767375 TTCTCAAACCCTCTGCTGCT 59.233 50.000 0.00 0.00 0.00 4.24
9474 18879 0.322975 TCTCAAACCCTCTGCTGCTC 59.677 55.000 0.00 0.00 0.00 4.26
9475 18880 0.035881 CTCAAACCCTCTGCTGCTCA 59.964 55.000 0.00 0.00 0.00 4.26
9476 18881 0.473755 TCAAACCCTCTGCTGCTCAA 59.526 50.000 0.00 0.00 0.00 3.02
9477 18882 0.879765 CAAACCCTCTGCTGCTCAAG 59.120 55.000 0.00 0.00 0.00 3.02
9478 18883 0.767375 AAACCCTCTGCTGCTCAAGA 59.233 50.000 0.00 0.00 0.00 3.02
9480 18885 0.767375 ACCCTCTGCTGCTCAAGAAA 59.233 50.000 0.00 0.00 0.00 2.52
9516 19276 5.918011 GGACATTTTTAACATCGCACTTGAA 59.082 36.000 0.00 0.00 0.00 2.69
9527 19287 1.135972 CGCACTTGAACCATTTCCTCG 60.136 52.381 0.00 0.00 0.00 4.63
9532 19292 4.153117 CACTTGAACCATTTCCTCGAGAAG 59.847 45.833 15.71 7.78 35.40 2.85
9533 19293 4.040461 ACTTGAACCATTTCCTCGAGAAGA 59.960 41.667 15.71 0.00 35.40 2.87
9534 19294 4.617253 TGAACCATTTCCTCGAGAAGAA 57.383 40.909 15.71 7.04 35.40 2.52
9577 19340 8.081633 TGCACTTCCAATCTGTTACATTAAAAG 58.918 33.333 0.00 0.00 0.00 2.27
9631 19394 1.218047 CTCCGTTGCCGATTCTCCA 59.782 57.895 0.00 0.00 35.63 3.86
9642 19405 1.535226 CGATTCTCCAATACACGGCGA 60.535 52.381 16.62 0.00 0.00 5.54
9643 19406 2.546778 GATTCTCCAATACACGGCGAA 58.453 47.619 16.62 0.00 32.12 4.70
9644 19407 2.459060 TTCTCCAATACACGGCGAAA 57.541 45.000 16.62 0.00 0.00 3.46
9645 19408 2.459060 TCTCCAATACACGGCGAAAA 57.541 45.000 16.62 0.00 0.00 2.29
9647 19410 1.129811 CTCCAATACACGGCGAAAACC 59.870 52.381 16.62 0.00 0.00 3.27
9650 19413 2.094957 CCAATACACGGCGAAAACCATT 60.095 45.455 16.62 0.99 0.00 3.16
9651 19414 3.570559 CAATACACGGCGAAAACCATTT 58.429 40.909 16.62 0.00 0.00 2.32
9652 19415 4.379603 CCAATACACGGCGAAAACCATTTA 60.380 41.667 16.62 0.00 0.00 1.40
9653 19416 2.981400 ACACGGCGAAAACCATTTAG 57.019 45.000 16.62 0.00 0.00 1.85
9654 19417 2.496111 ACACGGCGAAAACCATTTAGA 58.504 42.857 16.62 0.00 0.00 2.10
9655 19418 3.078837 ACACGGCGAAAACCATTTAGAT 58.921 40.909 16.62 0.00 0.00 1.98
9656 19419 4.255301 ACACGGCGAAAACCATTTAGATA 58.745 39.130 16.62 0.00 0.00 1.98
9657 19420 4.093850 ACACGGCGAAAACCATTTAGATAC 59.906 41.667 16.62 0.00 0.00 2.24
9658 19421 3.624410 ACGGCGAAAACCATTTAGATACC 59.376 43.478 16.62 0.00 0.00 2.73
9659 19422 3.623960 CGGCGAAAACCATTTAGATACCA 59.376 43.478 0.00 0.00 0.00 3.25
9688 19451 6.435904 CCATGGACATTTAGGACAAAACCTAA 59.564 38.462 5.56 0.00 46.64 2.69
9703 19466 9.191995 GACAAAACCTAATAAATCCAACAAGTG 57.808 33.333 0.00 0.00 0.00 3.16
9722 19492 0.935196 GGCGCCAGAACTATAAACCG 59.065 55.000 24.80 0.00 0.00 4.44
9735 19505 1.529226 TAAACCGGTGATGCCAAGTG 58.471 50.000 8.52 0.00 36.97 3.16
9742 19512 2.353704 CGGTGATGCCAAGTGTCTCTAA 60.354 50.000 0.00 0.00 36.97 2.10
9819 19591 3.920446 GTTTGGCCGAAAACCATGTATT 58.080 40.909 7.10 0.00 36.96 1.89
9826 19598 5.336134 GGCCGAAAACCATGTATTTAACTGT 60.336 40.000 0.00 0.00 0.00 3.55
9829 19601 7.021196 CCGAAAACCATGTATTTAACTGTCTG 58.979 38.462 0.00 0.00 0.00 3.51
9888 19660 0.915364 AGGAGGATCAAGGCCAAGAC 59.085 55.000 5.01 0.00 36.25 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 189 0.865111 TGCAAGACGACGGTGAAATG 59.135 50.000 0.00 0.00 0.00 2.32
295 298 7.769272 TGTTTTCTTCTTGGCTGTATTTTTG 57.231 32.000 0.00 0.00 0.00 2.44
352 390 0.248866 GGGTGAAGTGGTTTGTTGCG 60.249 55.000 0.00 0.00 0.00 4.85
401 443 8.409358 AGGGATCTGGTTGCAATTTATAATAC 57.591 34.615 0.59 0.00 0.00 1.89
453 596 0.101759 GCAGTATCTTCCGCCACGTA 59.898 55.000 0.00 0.00 0.00 3.57
559 755 3.189568 TGGCAACACTCACTTTGCT 57.810 47.368 6.29 0.00 46.11 3.91
596 792 4.707030 TGCCTCTTAAGAATTGCATGTG 57.293 40.909 16.00 0.00 0.00 3.21
640 836 2.362760 AATCCATGGCCGCTTGCA 60.363 55.556 6.96 0.00 43.89 4.08
648 844 3.193267 TGCACAAGTTAAGAATCCATGGC 59.807 43.478 6.96 0.00 0.00 4.40
680 1851 4.384208 CCTGGTTAGGTCCAATAGTCCAAG 60.384 50.000 0.00 0.00 39.39 3.61
681 1852 3.521937 CCTGGTTAGGTCCAATAGTCCAA 59.478 47.826 0.00 0.00 39.39 3.53
709 1881 9.384764 AGGAGAGGAGAAATTTATACGAAAAAG 57.615 33.333 0.00 0.00 0.00 2.27
747 1919 1.903860 ACGTAACATAGGCCAAGGTGA 59.096 47.619 5.01 0.00 0.00 4.02
770 1947 2.073101 GTGAGGGATGGGGGAGGTC 61.073 68.421 0.00 0.00 0.00 3.85
781 1958 4.715130 CCGAGGGTGGGTGAGGGA 62.715 72.222 0.00 0.00 0.00 4.20
784 1961 2.214216 TTGACCGAGGGTGGGTGAG 61.214 63.158 0.00 0.00 38.07 3.51
882 2061 3.042733 TTAGCATGGGGCCCGTGAG 62.043 63.158 42.28 22.04 42.73 3.51
896 2075 0.316196 GCGGATTCATGCGTGTTAGC 60.316 55.000 5.68 2.71 43.82 3.09
904 2083 1.102809 TGGTGATGGCGGATTCATGC 61.103 55.000 0.00 0.00 0.00 4.06
923 2102 0.702316 GTTATGAGGTGGGGGTTGGT 59.298 55.000 0.00 0.00 0.00 3.67
926 2105 1.693799 ATGGTTATGAGGTGGGGGTT 58.306 50.000 0.00 0.00 0.00 4.11
938 2117 6.087456 AGGATGAGTGGAGTGATATGGTTAT 58.913 40.000 0.00 0.00 0.00 1.89
941 2120 3.933886 AGGATGAGTGGAGTGATATGGT 58.066 45.455 0.00 0.00 0.00 3.55
966 2145 2.695520 TACTCGACACACCACCCCGA 62.696 60.000 0.00 0.00 0.00 5.14
975 2154 1.684450 TGGTTTGAGCTACTCGACACA 59.316 47.619 0.00 0.00 32.35 3.72
982 2161 4.148128 CCATCTGATGGTTTGAGCTACT 57.852 45.455 25.34 0.00 45.54 2.57
1018 2197 0.108992 GCTACACCGTTGACGATGGA 60.109 55.000 8.03 0.00 37.14 3.41
1045 2263 3.707189 GGGAGGGGAGGGGAGGAA 61.707 72.222 0.00 0.00 0.00 3.36
1048 2266 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
1054 2272 4.431947 TAGGGGGAGGGGAGGGGA 62.432 72.222 0.00 0.00 0.00 4.81
1055 2273 4.188511 GTAGGGGGAGGGGAGGGG 62.189 77.778 0.00 0.00 0.00 4.79
1056 2274 4.188511 GGTAGGGGGAGGGGAGGG 62.189 77.778 0.00 0.00 0.00 4.30
1057 2275 1.707691 TAGGTAGGGGGAGGGGAGG 60.708 68.421 0.00 0.00 0.00 4.30
1058 2276 1.301913 TGTAGGTAGGGGGAGGGGAG 61.302 65.000 0.00 0.00 0.00 4.30
1059 2277 1.231059 TGTAGGTAGGGGGAGGGGA 60.231 63.158 0.00 0.00 0.00 4.81
1060 2278 1.236282 CTGTAGGTAGGGGGAGGGG 59.764 68.421 0.00 0.00 0.00 4.79
1061 2279 0.105607 GACTGTAGGTAGGGGGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
1062 2280 0.105607 GGACTGTAGGTAGGGGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
1063 2281 0.935194 AGGACTGTAGGTAGGGGGAG 59.065 60.000 0.00 0.00 0.00 4.30
1064 2282 1.290130 GAAGGACTGTAGGTAGGGGGA 59.710 57.143 0.00 0.00 0.00 4.81
1065 2283 1.007963 TGAAGGACTGTAGGTAGGGGG 59.992 57.143 0.00 0.00 0.00 5.40
1066 2284 2.544844 TGAAGGACTGTAGGTAGGGG 57.455 55.000 0.00 0.00 0.00 4.79
1067 2285 5.186198 CAAAATGAAGGACTGTAGGTAGGG 58.814 45.833 0.00 0.00 0.00 3.53
1068 2286 4.636206 GCAAAATGAAGGACTGTAGGTAGG 59.364 45.833 0.00 0.00 0.00 3.18
1069 2287 4.636206 GGCAAAATGAAGGACTGTAGGTAG 59.364 45.833 0.00 0.00 0.00 3.18
1070 2288 4.042311 TGGCAAAATGAAGGACTGTAGGTA 59.958 41.667 0.00 0.00 0.00 3.08
1071 2289 3.181434 TGGCAAAATGAAGGACTGTAGGT 60.181 43.478 0.00 0.00 0.00 3.08
1072 2290 3.191371 GTGGCAAAATGAAGGACTGTAGG 59.809 47.826 0.00 0.00 0.00 3.18
1073 2291 3.191371 GGTGGCAAAATGAAGGACTGTAG 59.809 47.826 0.00 0.00 0.00 2.74
1074 2292 3.153919 GGTGGCAAAATGAAGGACTGTA 58.846 45.455 0.00 0.00 0.00 2.74
1075 2293 1.963515 GGTGGCAAAATGAAGGACTGT 59.036 47.619 0.00 0.00 0.00 3.55
1076 2294 1.962807 TGGTGGCAAAATGAAGGACTG 59.037 47.619 0.00 0.00 0.00 3.51
1077 2295 1.963515 GTGGTGGCAAAATGAAGGACT 59.036 47.619 0.00 0.00 0.00 3.85
1078 2296 1.963515 AGTGGTGGCAAAATGAAGGAC 59.036 47.619 0.00 0.00 0.00 3.85
1079 2297 2.158475 AGAGTGGTGGCAAAATGAAGGA 60.158 45.455 0.00 0.00 0.00 3.36
1080 2298 2.242043 AGAGTGGTGGCAAAATGAAGG 58.758 47.619 0.00 0.00 0.00 3.46
1103 2321 7.124147 CCTTTCTTCTCTCTCTCTCCTAAATGT 59.876 40.741 0.00 0.00 0.00 2.71
1130 3877 2.567985 TGTTCAGGGTCGTTTCCTTTC 58.432 47.619 0.00 0.00 31.06 2.62
1145 3892 5.190330 GGAGGTTATAGGTTAGGGTTGTTCA 59.810 44.000 0.00 0.00 0.00 3.18
1185 3932 3.586100 ACGCTGTTTTTGTTTTCTGGT 57.414 38.095 0.00 0.00 0.00 4.00
1236 3984 3.830192 CTTTCGGCCATGGCTGCC 61.830 66.667 36.54 19.84 46.36 4.85
1237 3985 2.751436 TCTTTCGGCCATGGCTGC 60.751 61.111 36.54 20.57 46.36 5.25
1258 4006 0.598680 ACGATGATAGAGCGCCTTGC 60.599 55.000 2.29 0.00 46.98 4.01
1318 4066 4.532834 TGGAAATTAGGTCCATGGCTAAC 58.467 43.478 6.96 0.00 40.33 2.34
1327 4075 8.218488 ACCTGAGTTTATATGGAAATTAGGTCC 58.782 37.037 9.99 0.00 29.88 4.46
1328 4076 9.057089 CACCTGAGTTTATATGGAAATTAGGTC 57.943 37.037 11.83 0.00 31.74 3.85
1462 4221 2.362120 CTCTGCCTTGCCTTGGGG 60.362 66.667 0.00 0.00 0.00 4.96
1464 4223 1.676967 GGTCTCTGCCTTGCCTTGG 60.677 63.158 0.00 0.00 0.00 3.61
1465 4224 1.073722 TGGTCTCTGCCTTGCCTTG 59.926 57.895 0.00 0.00 0.00 3.61
1466 4225 1.073897 GTGGTCTCTGCCTTGCCTT 59.926 57.895 0.00 0.00 0.00 4.35
1467 4226 2.753029 GTGGTCTCTGCCTTGCCT 59.247 61.111 0.00 0.00 0.00 4.75
1468 4227 2.360475 GGTGGTCTCTGCCTTGCC 60.360 66.667 0.00 0.00 0.00 4.52
1470 4229 2.743928 GCGGTGGTCTCTGCCTTG 60.744 66.667 0.00 0.00 34.02 3.61
1501 4260 1.244697 TGACTCTGGCGAGGAGTGTC 61.245 60.000 11.26 5.37 43.13 3.67
1508 4267 3.691049 TTTTGTTTTGACTCTGGCGAG 57.309 42.857 5.08 5.08 43.10 5.03
1544 4303 4.505970 CAGGGGGAGGGGGAGAGG 62.506 77.778 0.00 0.00 0.00 3.69
1545 4304 2.277126 ATTCAGGGGGAGGGGGAGAG 62.277 65.000 0.00 0.00 0.00 3.20
1546 4305 2.271493 GATTCAGGGGGAGGGGGAGA 62.271 65.000 0.00 0.00 0.00 3.71
1547 4306 1.772156 GATTCAGGGGGAGGGGGAG 60.772 68.421 0.00 0.00 0.00 4.30
1548 4307 2.376842 GATTCAGGGGGAGGGGGA 59.623 66.667 0.00 0.00 0.00 4.81
1549 4308 2.778717 GGATTCAGGGGGAGGGGG 60.779 72.222 0.00 0.00 0.00 5.40
1715 4532 3.000819 TAGTCGCTGGGTGGGTGG 61.001 66.667 0.00 0.00 0.00 4.61
1716 4533 2.227089 GACTAGTCGCTGGGTGGGTG 62.227 65.000 7.22 0.00 0.00 4.61
1717 4534 1.982938 GACTAGTCGCTGGGTGGGT 60.983 63.158 7.22 0.00 0.00 4.51
1718 4535 2.893398 GACTAGTCGCTGGGTGGG 59.107 66.667 7.22 0.00 0.00 4.61
1719 4536 2.490217 CGACTAGTCGCTGGGTGG 59.510 66.667 30.44 4.09 46.50 4.61
1730 4547 0.106335 TCCGTCTAGGGCTCGACTAG 59.894 60.000 2.85 2.85 41.52 2.57
1840 4677 1.623311 AGGGAAAAATCGGGCCTTTTG 59.377 47.619 0.84 0.00 0.00 2.44
1841 4678 1.899814 GAGGGAAAAATCGGGCCTTTT 59.100 47.619 0.84 0.53 0.00 2.27
1842 4679 1.557099 GAGGGAAAAATCGGGCCTTT 58.443 50.000 0.84 0.00 0.00 3.11
1843 4680 0.679960 CGAGGGAAAAATCGGGCCTT 60.680 55.000 0.84 0.00 35.33 4.35
1885 4722 0.613777 ACCAACTCCGCCCTTAGAAG 59.386 55.000 0.00 0.00 0.00 2.85
1920 4757 3.148279 CTCCGGGTCTTCCTCGGG 61.148 72.222 0.00 0.00 43.09 5.14
1942 4779 0.108186 GTAAAATGGCAAGGCAGGGC 60.108 55.000 2.05 0.00 0.00 5.19
1989 4830 4.648762 CCACAGAAGACAGATACAGATCCT 59.351 45.833 0.00 0.00 31.81 3.24
1990 4831 4.404073 ACCACAGAAGACAGATACAGATCC 59.596 45.833 0.00 0.00 31.81 3.36
1995 4836 3.070878 TGCAACCACAGAAGACAGATACA 59.929 43.478 0.00 0.00 0.00 2.29
1996 4837 3.664107 TGCAACCACAGAAGACAGATAC 58.336 45.455 0.00 0.00 0.00 2.24
2001 4843 0.179020 CCCTGCAACCACAGAAGACA 60.179 55.000 0.00 0.00 40.25 3.41
2004 4846 1.171308 CATCCCTGCAACCACAGAAG 58.829 55.000 0.00 0.00 40.25 2.85
2013 4859 2.046023 CGTCAGCCATCCCTGCAA 60.046 61.111 0.00 0.00 32.87 4.08
2051 4897 3.834799 ATCCCTCGCCGTCGAACC 61.835 66.667 0.00 0.00 44.98 3.62
2082 4928 4.402528 CGATGGTGGCGGGTTCCA 62.403 66.667 0.00 0.00 35.64 3.53
2161 5007 3.969995 CTAGAAAGGCTAGGGCGTC 57.030 57.895 0.00 0.00 42.41 5.19
2172 5018 4.555511 GCACAGCAGAACCAAACTAGAAAG 60.556 45.833 0.00 0.00 0.00 2.62
2191 5037 0.472044 TGCAAGTAGTTCAGGGCACA 59.528 50.000 0.00 0.00 0.00 4.57
2206 5067 6.057533 ACTATAGCATTGATAGCACTTGCAA 58.942 36.000 15.21 0.00 45.16 4.08
2218 5079 4.635765 GCACAAACAGGACTATAGCATTGA 59.364 41.667 0.00 0.00 0.00 2.57
2246 5107 3.071167 AGGAACTGACAGTTAACAGGGAC 59.929 47.826 20.61 5.90 38.80 4.46
2263 5124 6.205101 TCTTCCGACTCTAAATACAGGAAC 57.795 41.667 0.00 0.00 33.37 3.62
2265 5126 5.163683 CGTTCTTCCGACTCTAAATACAGGA 60.164 44.000 0.00 0.00 0.00 3.86
2279 5140 4.109766 CACAGTAATATGCGTTCTTCCGA 58.890 43.478 0.00 0.00 0.00 4.55
2285 5146 3.928211 CTGCACACAGTAATATGCGTTC 58.072 45.455 0.00 0.00 41.07 3.95
2297 5164 6.234138 GTTCATCAGAAAACACTGCACACAG 61.234 44.000 0.00 0.00 41.83 3.66
2325 5192 7.038017 TGAGGAAAAATATTGGCAATTACCCAA 60.038 33.333 19.21 11.01 45.63 4.12
2326 5193 6.441924 TGAGGAAAAATATTGGCAATTACCCA 59.558 34.615 19.21 0.00 0.00 4.51
2327 5194 6.883744 TGAGGAAAAATATTGGCAATTACCC 58.116 36.000 19.21 10.96 0.00 3.69
2328 5195 6.986231 CCTGAGGAAAAATATTGGCAATTACC 59.014 38.462 19.21 12.13 0.00 2.85
2329 5196 7.781056 TCCTGAGGAAAAATATTGGCAATTAC 58.219 34.615 19.21 0.88 0.00 1.89
2489 5358 4.137543 ACTTTGTAGCCTTGACAGGAAAG 58.862 43.478 0.00 0.00 44.19 2.62
2531 5400 7.275183 TCAAGGTAATAACTGATGTGGAGATG 58.725 38.462 0.00 0.00 0.00 2.90
2603 5472 7.504924 TTACAATGATTTGAGGTTCTCGTTT 57.495 32.000 0.00 0.00 36.64 3.60
2607 5476 6.749923 AGCTTACAATGATTTGAGGTTCTC 57.250 37.500 0.00 0.00 36.64 2.87
2634 5503 6.597672 ACAACTCGACTTAATAAATGCATGGA 59.402 34.615 0.00 0.00 0.00 3.41
2635 5508 6.785191 ACAACTCGACTTAATAAATGCATGG 58.215 36.000 0.00 0.00 0.00 3.66
2662 5537 0.804933 CAGTTCCGGCGGTTACTAGC 60.805 60.000 27.32 8.16 0.00 3.42
2715 5598 7.581213 TGAATGACAGAAACCAACAACTAAT 57.419 32.000 0.00 0.00 0.00 1.73
2740 5628 5.075448 CGAATATTGCACGTAATCATGCTC 58.925 41.667 0.00 0.00 42.55 4.26
2779 5694 6.899393 TGAAAAGCATCCATTAAAGTGTCT 57.101 33.333 0.00 0.00 0.00 3.41
2801 5716 1.679139 TGTGGCAGGAGAACAACTTG 58.321 50.000 0.00 0.00 0.00 3.16
2880 5806 8.997323 CAATGTATATCCATCTTCCAAGTCTTC 58.003 37.037 0.00 0.00 0.00 2.87
2885 5811 7.698506 ATGCAATGTATATCCATCTTCCAAG 57.301 36.000 0.00 0.00 0.00 3.61
3005 5931 5.011431 TGCTCAGGATTGATGATGTAGGTAG 59.989 44.000 0.00 0.00 31.68 3.18
3141 6075 3.435105 TTGTGTGCAAATGGAGAACAC 57.565 42.857 0.00 0.00 41.15 3.32
3201 6135 5.712152 ATTTTCAGCCTCCTTGTGTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
3228 6162 5.510520 GCTCTTTACATCCACAGCTAGCTAT 60.511 44.000 18.86 2.05 0.00 2.97
3340 6289 5.269505 AGCATATAACTCTGACTGGTCAC 57.730 43.478 0.00 0.00 35.46 3.67
3530 6480 4.082300 CCAGCATTATTAACTGCAACCACA 60.082 41.667 8.65 0.00 40.88 4.17
3569 6519 1.762957 ACCCTGGACATGTAATCTCCG 59.237 52.381 0.00 0.00 0.00 4.63
3995 6949 6.861065 TTAAGCAACCACAGAGAAGTTAAG 57.139 37.500 0.00 0.00 0.00 1.85
4451 7405 5.316167 TGGTTCAAGTAAGCATCATCTGTT 58.684 37.500 0.00 0.00 40.58 3.16
4490 7444 1.073897 AACTGAAGCCAGCACCTCC 59.926 57.895 0.00 0.00 44.16 4.30
4750 7714 9.213799 GGGCAAATTTCAAATGTTCAGTTTATA 57.786 29.630 0.00 0.00 0.00 0.98
4751 7715 7.938490 AGGGCAAATTTCAAATGTTCAGTTTAT 59.062 29.630 0.00 0.00 0.00 1.40
4752 7716 7.278875 AGGGCAAATTTCAAATGTTCAGTTTA 58.721 30.769 0.00 0.00 0.00 2.01
4780 7748 4.688879 CCTATGAGCGTTGTGTTAAGACAA 59.311 41.667 13.74 13.74 37.57 3.18
4782 7750 4.326548 GTCCTATGAGCGTTGTGTTAAGAC 59.673 45.833 0.00 0.00 0.00 3.01
4875 7843 6.310224 ACAATTTAACAGACACAAAACTGCAC 59.690 34.615 0.00 0.00 37.61 4.57
4945 7916 3.626028 AAAGAAGTCCGCACAAATGTC 57.374 42.857 0.00 0.00 0.00 3.06
5058 8031 0.969149 ACTGTGCCGACTCATTCTGA 59.031 50.000 0.00 0.00 0.00 3.27
5215 8188 6.018588 TGCAAAATCAACAAGCTTTCAGAATG 60.019 34.615 0.00 0.00 37.54 2.67
5274 8247 3.593942 TGGTCCTGTGGGGGTTATATAG 58.406 50.000 0.00 0.00 35.33 1.31
5324 8297 2.880443 ACCAACACCAAGAAGCATCAT 58.120 42.857 0.00 0.00 0.00 2.45
5522 8495 8.823220 AAATTTAATAGTACTTGCAGTGGGAT 57.177 30.769 0.00 0.00 0.00 3.85
5638 8612 3.411517 AATGCAGGGGGACGAGGG 61.412 66.667 0.00 0.00 0.00 4.30
5639 8613 2.124570 CAATGCAGGGGGACGAGG 60.125 66.667 0.00 0.00 0.00 4.63
5640 8614 1.153289 CTCAATGCAGGGGGACGAG 60.153 63.158 0.00 0.00 0.00 4.18
5641 8615 0.616395 TACTCAATGCAGGGGGACGA 60.616 55.000 0.00 0.00 0.00 4.20
5642 8616 0.462047 GTACTCAATGCAGGGGGACG 60.462 60.000 0.00 0.00 0.00 4.79
5643 8617 0.618458 TGTACTCAATGCAGGGGGAC 59.382 55.000 0.00 0.00 0.00 4.46
5644 8618 1.490490 GATGTACTCAATGCAGGGGGA 59.510 52.381 0.00 0.00 0.00 4.81
5649 8623 5.106436 TGCTCTTTTGATGTACTCAATGCAG 60.106 40.000 8.08 6.12 43.30 4.41
5650 8624 4.761227 TGCTCTTTTGATGTACTCAATGCA 59.239 37.500 8.08 0.00 43.30 3.96
5713 9035 5.125257 CACCATTTATGATGCACCTAACACA 59.875 40.000 0.00 0.00 0.00 3.72
5784 9106 9.773328 GTCTGTATGATTTTGATTTTCGATGAA 57.227 29.630 0.00 0.00 0.00 2.57
5785 9107 8.945057 TGTCTGTATGATTTTGATTTTCGATGA 58.055 29.630 0.00 0.00 0.00 2.92
5786 9108 9.218359 CTGTCTGTATGATTTTGATTTTCGATG 57.782 33.333 0.00 0.00 0.00 3.84
5788 9110 7.606073 TCCTGTCTGTATGATTTTGATTTTCGA 59.394 33.333 0.00 0.00 0.00 3.71
5789 9111 7.751732 TCCTGTCTGTATGATTTTGATTTTCG 58.248 34.615 0.00 0.00 0.00 3.46
5790 9112 9.912634 TTTCCTGTCTGTATGATTTTGATTTTC 57.087 29.630 0.00 0.00 0.00 2.29
5792 9114 9.918630 CTTTTCCTGTCTGTATGATTTTGATTT 57.081 29.630 0.00 0.00 0.00 2.17
5793 9115 9.300681 TCTTTTCCTGTCTGTATGATTTTGATT 57.699 29.630 0.00 0.00 0.00 2.57
5794 9116 8.868522 TCTTTTCCTGTCTGTATGATTTTGAT 57.131 30.769 0.00 0.00 0.00 2.57
5795 9117 8.690203 TTCTTTTCCTGTCTGTATGATTTTGA 57.310 30.769 0.00 0.00 0.00 2.69
5796 9118 9.748708 TTTTCTTTTCCTGTCTGTATGATTTTG 57.251 29.630 0.00 0.00 0.00 2.44
5798 9120 9.750125 GTTTTTCTTTTCCTGTCTGTATGATTT 57.250 29.630 0.00 0.00 0.00 2.17
5799 9121 8.076178 CGTTTTTCTTTTCCTGTCTGTATGATT 58.924 33.333 0.00 0.00 0.00 2.57
5800 9122 7.444183 TCGTTTTTCTTTTCCTGTCTGTATGAT 59.556 33.333 0.00 0.00 0.00 2.45
5801 9123 6.764085 TCGTTTTTCTTTTCCTGTCTGTATGA 59.236 34.615 0.00 0.00 0.00 2.15
5802 9124 6.954944 TCGTTTTTCTTTTCCTGTCTGTATG 58.045 36.000 0.00 0.00 0.00 2.39
5803 9125 7.562454 TTCGTTTTTCTTTTCCTGTCTGTAT 57.438 32.000 0.00 0.00 0.00 2.29
5804 9126 6.988622 TTCGTTTTTCTTTTCCTGTCTGTA 57.011 33.333 0.00 0.00 0.00 2.74
5805 9127 5.890424 TTCGTTTTTCTTTTCCTGTCTGT 57.110 34.783 0.00 0.00 0.00 3.41
5806 9128 7.702348 AGAAATTCGTTTTTCTTTTCCTGTCTG 59.298 33.333 8.79 0.00 41.95 3.51
5807 9129 7.772166 AGAAATTCGTTTTTCTTTTCCTGTCT 58.228 30.769 8.79 0.00 41.95 3.41
5808 9130 7.987268 AGAAATTCGTTTTTCTTTTCCTGTC 57.013 32.000 8.79 0.00 41.95 3.51
5809 9131 9.678941 GATAGAAATTCGTTTTTCTTTTCCTGT 57.321 29.630 16.49 0.00 41.95 4.00
5810 9132 9.677567 TGATAGAAATTCGTTTTTCTTTTCCTG 57.322 29.630 16.49 0.00 41.95 3.86
5833 9155 9.933240 AAGGATCCTTTCTTCTATTGATTTGAT 57.067 29.630 21.89 0.00 31.29 2.57
5834 9156 9.759473 AAAGGATCCTTTCTTCTATTGATTTGA 57.241 29.630 30.41 0.00 41.91 2.69
5848 9170 7.417229 GATTCAAATCAGGGAAAGGATCCTTTC 60.417 40.741 41.52 41.52 44.89 2.62
5849 9171 6.382282 GATTCAAATCAGGGAAAGGATCCTTT 59.618 38.462 34.90 34.90 40.46 3.11
5850 9172 5.896106 GATTCAAATCAGGGAAAGGATCCTT 59.104 40.000 21.89 21.89 40.46 3.36
5851 9173 5.453158 GATTCAAATCAGGGAAAGGATCCT 58.547 41.667 9.02 9.02 40.46 3.24
5852 9174 4.586421 GGATTCAAATCAGGGAAAGGATCC 59.414 45.833 2.48 2.48 41.25 3.36
5853 9175 5.301298 CAGGATTCAAATCAGGGAAAGGATC 59.699 44.000 5.19 0.00 37.15 3.36
5854 9176 5.206587 CAGGATTCAAATCAGGGAAAGGAT 58.793 41.667 5.19 0.00 37.15 3.24
5855 9177 4.570505 CCAGGATTCAAATCAGGGAAAGGA 60.571 45.833 5.19 0.00 37.15 3.36
5856 9178 3.703052 CCAGGATTCAAATCAGGGAAAGG 59.297 47.826 5.19 0.00 37.15 3.11
5857 9179 4.159135 CACCAGGATTCAAATCAGGGAAAG 59.841 45.833 14.96 5.05 36.81 2.62
5858 9180 4.088634 CACCAGGATTCAAATCAGGGAAA 58.911 43.478 14.96 0.00 36.81 3.13
5859 9181 3.564133 CCACCAGGATTCAAATCAGGGAA 60.564 47.826 14.96 0.00 36.81 3.97
5860 9182 2.025037 CCACCAGGATTCAAATCAGGGA 60.025 50.000 14.96 0.00 36.81 4.20
5861 9183 2.025037 TCCACCAGGATTCAAATCAGGG 60.025 50.000 14.26 11.82 39.61 4.45
5862 9184 3.370840 TCCACCAGGATTCAAATCAGG 57.629 47.619 0.00 8.09 39.61 3.86
5871 9193 7.749070 AACAGTTGTTATATGTCCACCAGGATT 60.749 37.037 0.00 0.00 40.57 3.01
5872 9194 6.297010 AACAGTTGTTATATGTCCACCAGGAT 60.297 38.462 0.00 0.00 40.57 3.24
5873 9195 4.534500 ACAGTTGTTATATGTCCACCAGGA 59.466 41.667 0.00 0.00 43.21 3.86
5874 9196 4.843728 ACAGTTGTTATATGTCCACCAGG 58.156 43.478 0.00 0.00 0.00 4.45
5875 9197 6.817765 AAACAGTTGTTATATGTCCACCAG 57.182 37.500 0.00 0.00 37.25 4.00
5876 9198 7.589958 AAAAACAGTTGTTATATGTCCACCA 57.410 32.000 0.00 0.00 37.25 4.17
5940 9262 1.078709 ACCGAGTGCATCAAATGTCG 58.921 50.000 0.00 0.00 0.00 4.35
5978 9301 2.168521 ACAGTATCTCAATGTGGTCCCG 59.831 50.000 0.00 0.00 0.00 5.14
6258 9639 2.461110 GCAATCCACGTGTAGCCGG 61.461 63.158 15.65 0.00 0.00 6.13
6397 9787 2.061220 CCCACTGCAGTCTGAGGAA 58.939 57.895 18.64 0.00 0.00 3.36
6399 9789 2.046507 GCCCACTGCAGTCTGAGG 60.047 66.667 18.64 15.23 40.77 3.86
6422 9812 4.572389 ACATATGTCGAATTTGGCTGAGAC 59.428 41.667 1.41 0.00 0.00 3.36
6428 9818 6.636850 GTGGAATAACATATGTCGAATTTGGC 59.363 38.462 9.23 0.00 0.00 4.52
6438 9828 7.611467 TGAAGAAGCTTGTGGAATAACATATGT 59.389 33.333 2.10 1.41 0.00 2.29
6676 10069 2.936498 ACGTTCAGTGAAGTTTGTCCAG 59.064 45.455 5.62 0.00 0.00 3.86
6742 10135 5.385509 TTTGCCTAAGGGAAAAGAATTCG 57.614 39.130 0.00 0.00 39.93 3.34
6769 10163 0.716108 GAGCGGTGAACGATTCAGTG 59.284 55.000 0.00 0.00 43.91 3.66
6772 10166 0.389817 CAGGAGCGGTGAACGATTCA 60.390 55.000 0.00 0.00 43.91 2.57
6786 10180 7.856145 AGAGCAATAATAACAGAAACAGGAG 57.144 36.000 0.00 0.00 0.00 3.69
6800 10194 7.661847 GGCACAGTACCTAAATAGAGCAATAAT 59.338 37.037 0.00 0.00 0.00 1.28
6834 10228 1.002624 TCAAACTGGGATCGGGTGC 60.003 57.895 0.00 0.00 0.00 5.01
6837 10231 0.676782 GGTGTCAAACTGGGATCGGG 60.677 60.000 0.00 0.00 0.00 5.14
6881 10275 3.885724 TGACTGCTATCAACATCGGAA 57.114 42.857 0.00 0.00 0.00 4.30
6958 10352 1.270550 CCAAAGGAACATCACCTGTGC 59.729 52.381 0.00 0.00 40.39 4.57
7016 10410 2.100584 CTCTCCAGTTTCTCCATCCGAG 59.899 54.545 0.00 0.00 40.30 4.63
7019 10413 3.103742 AGACTCTCCAGTTTCTCCATCC 58.896 50.000 0.00 0.00 30.63 3.51
7070 10464 2.429930 CCACCAAGACCAAGCGGA 59.570 61.111 0.00 0.00 35.59 5.54
7073 10467 1.152756 ACCACCACCAAGACCAAGC 60.153 57.895 0.00 0.00 0.00 4.01
7091 10485 2.603075 ATTTTACCTTGGGCTGCAGA 57.397 45.000 20.43 0.00 0.00 4.26
7154 10551 5.235616 ACAGAATGCAAACTTTTGAGCAATG 59.764 36.000 5.87 1.59 42.53 2.82
7175 10572 5.159209 GCAGGAAATCATTGACAGAAACAG 58.841 41.667 0.00 0.00 0.00 3.16
7180 10577 6.604396 ACAATATGCAGGAAATCATTGACAGA 59.396 34.615 0.00 0.00 0.00 3.41
7181 10578 6.802608 ACAATATGCAGGAAATCATTGACAG 58.197 36.000 0.00 0.00 0.00 3.51
7182 10579 6.183360 GGACAATATGCAGGAAATCATTGACA 60.183 38.462 0.00 0.00 0.00 3.58
7183 10580 6.040166 AGGACAATATGCAGGAAATCATTGAC 59.960 38.462 0.00 0.00 0.00 3.18
7184 10581 6.131264 AGGACAATATGCAGGAAATCATTGA 58.869 36.000 0.00 0.00 0.00 2.57
7201 10598 7.014230 ACAACAAATTACAAGCACTAGGACAAT 59.986 33.333 0.00 0.00 0.00 2.71
7231 10628 5.856126 AAAAATCAATGACATTGCAGCTG 57.144 34.783 21.17 10.11 40.05 4.24
7273 10670 7.066887 TGCAAGTGTAGGTAACATAATCAATGG 59.933 37.037 0.00 0.00 41.10 3.16
7288 10685 2.732597 GCTACGTCTCTGCAAGTGTAGG 60.733 54.545 19.25 0.00 36.45 3.18
7420 10817 4.022849 ACATTAGCACCTCTTGAAACAAGC 60.023 41.667 6.62 0.00 0.00 4.01
7443 10840 0.599991 CGTAACACTGCCACTGCTCA 60.600 55.000 0.00 0.00 38.71 4.26
7450 10847 0.320421 GAGAAGCCGTAACACTGCCA 60.320 55.000 0.00 0.00 0.00 4.92
7470 10867 2.738000 CGAGGAGTTGAAGATGGAGCTG 60.738 54.545 0.00 0.00 0.00 4.24
7511 10908 1.004918 CACCACCCGGTCTTCTCAC 60.005 63.158 0.00 0.00 44.71 3.51
7564 10961 1.508632 ACATCGGGTTGTTGAGAACG 58.491 50.000 0.00 0.00 0.00 3.95
7876 11276 0.179124 GGCGTACCTGAGAGCTTCTG 60.179 60.000 0.00 0.00 0.00 3.02
7912 11313 4.684703 CGAACTGACCTACCAACTTTAGTG 59.315 45.833 0.00 0.00 0.00 2.74
7934 11335 8.492673 AACATGGCATATTCAGGTAATATACG 57.507 34.615 0.00 0.00 38.47 3.06
7939 11340 6.040842 GTCCAAACATGGCATATTCAGGTAAT 59.959 38.462 0.00 0.00 0.00 1.89
7973 11375 3.963383 TTTTTCAACTCTCCGAACTGC 57.037 42.857 0.00 0.00 0.00 4.40
8000 11402 8.253113 AGGCAACATAAATATTTCTTGTTCCAG 58.747 33.333 24.41 17.13 41.41 3.86
8107 11509 1.808411 TCCATCTGTCCAAGAAACGC 58.192 50.000 0.00 0.00 38.79 4.84
8108 11510 3.866651 AGATCCATCTGTCCAAGAAACG 58.133 45.455 0.00 0.00 38.79 3.60
8348 11750 9.033481 CATTCACCGACAATTGCATTTTATATT 57.967 29.630 5.05 0.00 0.00 1.28
8555 11961 2.435059 GACTGCGTCTTGGCCTCC 60.435 66.667 3.32 0.00 0.00 4.30
8609 13322 1.743623 CGCCGCCTGAAATGTACCA 60.744 57.895 0.00 0.00 0.00 3.25
8665 13380 5.470098 AGACACAATTACATCCACAAGTCAC 59.530 40.000 0.00 0.00 0.00 3.67
8758 13481 0.036010 ATCCAGGAACACGCTTCCAG 60.036 55.000 13.53 6.57 41.00 3.86
8759 13482 0.036388 GATCCAGGAACACGCTTCCA 60.036 55.000 13.53 0.00 41.00 3.53
8764 13487 0.247736 AGACTGATCCAGGAACACGC 59.752 55.000 0.00 0.00 35.51 5.34
8815 13550 3.115554 GTCCCAACATAAATCGCAATGC 58.884 45.455 0.00 0.00 0.00 3.56
8844 13579 0.249868 TCAGAACCACAACAGCGGAG 60.250 55.000 0.00 0.00 0.00 4.63
8894 13696 1.535462 GCTCTGCTGGCGTAAAAGAAA 59.465 47.619 0.00 0.00 0.00 2.52
8895 13697 1.156736 GCTCTGCTGGCGTAAAAGAA 58.843 50.000 0.00 0.00 0.00 2.52
8896 13698 0.673644 GGCTCTGCTGGCGTAAAAGA 60.674 55.000 0.00 0.00 0.00 2.52
8897 13699 1.796796 GGCTCTGCTGGCGTAAAAG 59.203 57.895 0.00 0.00 0.00 2.27
8898 13700 3.981308 GGCTCTGCTGGCGTAAAA 58.019 55.556 0.00 0.00 0.00 1.52
8904 13706 2.046892 TTTCTCGGCTCTGCTGGC 60.047 61.111 0.00 0.00 35.34 4.85
8905 13707 0.392193 ATGTTTCTCGGCTCTGCTGG 60.392 55.000 0.00 0.00 35.34 4.85
8906 13708 1.005340 GATGTTTCTCGGCTCTGCTG 58.995 55.000 0.00 0.00 36.06 4.41
8907 13709 0.610174 TGATGTTTCTCGGCTCTGCT 59.390 50.000 0.00 0.00 0.00 4.24
8908 13710 0.723981 GTGATGTTTCTCGGCTCTGC 59.276 55.000 0.00 0.00 0.00 4.26
8909 13711 2.266554 GAGTGATGTTTCTCGGCTCTG 58.733 52.381 0.00 0.00 0.00 3.35
8910 13712 1.135257 CGAGTGATGTTTCTCGGCTCT 60.135 52.381 6.67 0.00 46.26 4.09
8911 13713 1.272781 CGAGTGATGTTTCTCGGCTC 58.727 55.000 6.67 0.00 46.26 4.70
8912 13714 3.425578 CGAGTGATGTTTCTCGGCT 57.574 52.632 6.67 0.00 46.26 5.52
8916 13718 1.993370 CCGAACCGAGTGATGTTTCTC 59.007 52.381 0.00 0.00 0.00 2.87
8917 13719 1.343465 ACCGAACCGAGTGATGTTTCT 59.657 47.619 0.00 0.00 0.00 2.52
8918 13720 1.725164 GACCGAACCGAGTGATGTTTC 59.275 52.381 0.00 0.00 0.00 2.78
8919 13721 1.792006 GACCGAACCGAGTGATGTTT 58.208 50.000 0.00 0.00 0.00 2.83
8920 13722 0.388134 CGACCGAACCGAGTGATGTT 60.388 55.000 0.00 0.00 0.00 2.71
8921 13723 1.211969 CGACCGAACCGAGTGATGT 59.788 57.895 0.00 0.00 0.00 3.06
8922 13724 1.516386 CCGACCGAACCGAGTGATG 60.516 63.158 0.00 0.00 0.00 3.07
8923 13725 1.975407 ACCGACCGAACCGAGTGAT 60.975 57.895 0.00 0.00 0.00 3.06
8924 13726 2.595463 ACCGACCGAACCGAGTGA 60.595 61.111 0.00 0.00 0.00 3.41
8925 13727 2.430244 CACCGACCGAACCGAGTG 60.430 66.667 0.00 0.00 0.00 3.51
8926 13728 4.353437 GCACCGACCGAACCGAGT 62.353 66.667 0.00 0.00 0.00 4.18
8938 13740 1.891060 GAGAGCTTTGTGACGCACCG 61.891 60.000 7.38 0.00 32.73 4.94
8943 13745 1.001406 AGGAAGGAGAGCTTTGTGACG 59.999 52.381 0.00 0.00 0.00 4.35
8944 13746 2.810852 CAAGGAAGGAGAGCTTTGTGAC 59.189 50.000 0.00 0.00 0.00 3.67
8948 13750 2.083002 GAGCAAGGAAGGAGAGCTTTG 58.917 52.381 0.00 0.00 35.36 2.77
8950 13752 0.617935 GGAGCAAGGAAGGAGAGCTT 59.382 55.000 0.00 0.00 35.36 3.74
8965 13791 2.250741 GAGGGAGGAGCAAGTGGAGC 62.251 65.000 0.00 0.00 0.00 4.70
8986 13812 2.836262 CCTCTGAGAGGCAAAGCTATG 58.164 52.381 16.73 0.00 43.29 2.23
9036 13862 0.234625 TGCTTTCGACATGCACGAAC 59.765 50.000 21.81 14.63 46.66 3.95
9062 13893 3.825328 AGACAAGCACACAATCTTCCTT 58.175 40.909 0.00 0.00 0.00 3.36
9117 14335 2.418976 GGGCTTGAAGAATTGTCGGTAC 59.581 50.000 0.00 0.00 0.00 3.34
9123 14341 3.228188 TGACAGGGCTTGAAGAATTGT 57.772 42.857 2.65 0.00 0.00 2.71
9153 14371 4.496336 GAGCAGAATGGGGCGGCT 62.496 66.667 9.56 0.00 39.46 5.52
9156 14384 2.515523 CCAGAGCAGAATGGGGCG 60.516 66.667 0.00 0.00 35.86 6.13
9163 14391 0.898320 GCTAGTGGACCAGAGCAGAA 59.102 55.000 19.26 0.00 34.96 3.02
9215 18548 4.884961 AGACCAGAGTGATACCCAACTAT 58.115 43.478 0.00 0.00 0.00 2.12
9217 18550 3.100671 GAGACCAGAGTGATACCCAACT 58.899 50.000 0.00 0.00 0.00 3.16
9218 18551 2.832129 TGAGACCAGAGTGATACCCAAC 59.168 50.000 0.00 0.00 0.00 3.77
9219 18552 3.184382 TGAGACCAGAGTGATACCCAA 57.816 47.619 0.00 0.00 0.00 4.12
9220 18553 2.919772 TGAGACCAGAGTGATACCCA 57.080 50.000 0.00 0.00 0.00 4.51
9221 18554 4.508662 CTTTTGAGACCAGAGTGATACCC 58.491 47.826 0.00 0.00 0.00 3.69
9222 18555 4.508662 CCTTTTGAGACCAGAGTGATACC 58.491 47.826 0.00 0.00 0.00 2.73
9223 18556 4.508662 CCCTTTTGAGACCAGAGTGATAC 58.491 47.826 0.00 0.00 0.00 2.24
9224 18557 3.055094 GCCCTTTTGAGACCAGAGTGATA 60.055 47.826 0.00 0.00 0.00 2.15
9225 18558 2.290577 GCCCTTTTGAGACCAGAGTGAT 60.291 50.000 0.00 0.00 0.00 3.06
9226 18559 1.072331 GCCCTTTTGAGACCAGAGTGA 59.928 52.381 0.00 0.00 0.00 3.41
9227 18560 1.202806 TGCCCTTTTGAGACCAGAGTG 60.203 52.381 0.00 0.00 0.00 3.51
9228 18561 1.072965 CTGCCCTTTTGAGACCAGAGT 59.927 52.381 0.00 0.00 0.00 3.24
9229 18562 1.818642 CTGCCCTTTTGAGACCAGAG 58.181 55.000 0.00 0.00 0.00 3.35
9230 18563 0.250901 GCTGCCCTTTTGAGACCAGA 60.251 55.000 0.00 0.00 0.00 3.86
9231 18564 0.251077 AGCTGCCCTTTTGAGACCAG 60.251 55.000 0.00 0.00 0.00 4.00
9232 18565 1.064003 TAGCTGCCCTTTTGAGACCA 58.936 50.000 0.00 0.00 0.00 4.02
9233 18566 1.271379 TGTAGCTGCCCTTTTGAGACC 60.271 52.381 0.00 0.00 0.00 3.85
9234 18567 2.185004 TGTAGCTGCCCTTTTGAGAC 57.815 50.000 0.00 0.00 0.00 3.36
9235 18568 2.949177 TTGTAGCTGCCCTTTTGAGA 57.051 45.000 0.00 0.00 0.00 3.27
9236 18569 2.352127 GCTTTGTAGCTGCCCTTTTGAG 60.352 50.000 0.00 0.00 44.27 3.02
9237 18570 1.613437 GCTTTGTAGCTGCCCTTTTGA 59.387 47.619 0.00 0.00 44.27 2.69
9238 18571 2.070262 GCTTTGTAGCTGCCCTTTTG 57.930 50.000 0.00 0.00 44.27 2.44
9239 18572 7.429658 AACAATGCTTTGTAGCTGCCCTTTT 62.430 40.000 17.36 0.00 45.30 2.27
9249 18582 7.378181 ACCTCCAATTAAACAATGCTTTGTAG 58.622 34.615 17.36 8.95 45.30 2.74
9273 18606 6.399775 CGTTCTCGCCTCTAAAGAGTTTTAAC 60.400 42.308 6.27 3.76 40.48 2.01
9279 18612 2.923605 CGTTCTCGCCTCTAAAGAGT 57.076 50.000 6.27 0.00 40.48 3.24
9328 18706 5.591877 CCTGAAAATCCGAAGAAGATCCATT 59.408 40.000 0.00 0.00 0.00 3.16
9330 18708 4.019321 ACCTGAAAATCCGAAGAAGATCCA 60.019 41.667 0.00 0.00 0.00 3.41
9332 18710 4.268884 CGACCTGAAAATCCGAAGAAGATC 59.731 45.833 0.00 0.00 0.00 2.75
9333 18711 4.081642 TCGACCTGAAAATCCGAAGAAGAT 60.082 41.667 0.00 0.00 0.00 2.40
9335 18713 3.585862 TCGACCTGAAAATCCGAAGAAG 58.414 45.455 0.00 0.00 0.00 2.85
9342 18747 2.017049 CCCACATCGACCTGAAAATCC 58.983 52.381 0.00 0.00 0.00 3.01
9357 18762 2.449518 TTCCTGGCCTCACCCACA 60.450 61.111 3.32 0.00 37.83 4.17
9361 18766 2.266055 CGAGTTCCTGGCCTCACC 59.734 66.667 3.32 0.00 39.84 4.02
9375 18780 8.469125 GCTAAAATTGTAAAAGAAACACACGAG 58.531 33.333 0.00 0.00 0.00 4.18
9376 18781 7.968956 TGCTAAAATTGTAAAAGAAACACACGA 59.031 29.630 0.00 0.00 0.00 4.35
9377 18782 8.109843 TGCTAAAATTGTAAAAGAAACACACG 57.890 30.769 0.00 0.00 0.00 4.49
9415 18820 0.332632 ATAGCAGGGCAAAGGAAGCA 59.667 50.000 0.00 0.00 0.00 3.91
9507 19267 1.135972 CGAGGAAATGGTTCAAGTGCG 60.136 52.381 0.00 0.00 35.25 5.34
9508 19268 2.151202 TCGAGGAAATGGTTCAAGTGC 58.849 47.619 0.00 0.00 35.25 4.40
9577 19340 7.572759 TCTTTGTTGTTCTTTCGTCATATGTC 58.427 34.615 1.90 0.00 0.00 3.06
9631 19394 3.926821 AAATGGTTTTCGCCGTGTATT 57.073 38.095 0.00 0.00 0.00 1.89
9642 19405 5.329399 TGGTGCTGGTATCTAAATGGTTTT 58.671 37.500 0.00 0.00 0.00 2.43
9643 19406 4.929479 TGGTGCTGGTATCTAAATGGTTT 58.071 39.130 0.00 0.00 0.00 3.27
9644 19407 4.584638 TGGTGCTGGTATCTAAATGGTT 57.415 40.909 0.00 0.00 0.00 3.67
9645 19408 4.464008 CATGGTGCTGGTATCTAAATGGT 58.536 43.478 0.00 0.00 0.00 3.55
9647 19410 4.516698 GTCCATGGTGCTGGTATCTAAATG 59.483 45.833 12.58 0.00 37.57 2.32
9650 19413 3.111484 TGTCCATGGTGCTGGTATCTAA 58.889 45.455 12.58 0.00 37.57 2.10
9651 19414 2.758130 TGTCCATGGTGCTGGTATCTA 58.242 47.619 12.58 0.00 37.57 1.98
9652 19415 1.583556 TGTCCATGGTGCTGGTATCT 58.416 50.000 12.58 0.00 37.57 1.98
9653 19416 2.645838 ATGTCCATGGTGCTGGTATC 57.354 50.000 12.58 0.00 37.57 2.24
9654 19417 3.386932 AAATGTCCATGGTGCTGGTAT 57.613 42.857 12.58 0.00 37.57 2.73
9655 19418 2.897271 AAATGTCCATGGTGCTGGTA 57.103 45.000 12.58 0.00 37.57 3.25
9656 19419 2.621407 CCTAAATGTCCATGGTGCTGGT 60.621 50.000 12.58 0.00 37.57 4.00
9657 19420 2.026641 CCTAAATGTCCATGGTGCTGG 58.973 52.381 12.58 2.83 37.66 4.85
9658 19421 2.684881 GTCCTAAATGTCCATGGTGCTG 59.315 50.000 12.58 0.00 0.00 4.41
9659 19422 2.308570 TGTCCTAAATGTCCATGGTGCT 59.691 45.455 12.58 0.00 0.00 4.40
9703 19466 0.935196 CGGTTTATAGTTCTGGCGCC 59.065 55.000 22.73 22.73 0.00 6.53
9706 19469 3.255969 TCACCGGTTTATAGTTCTGGC 57.744 47.619 2.97 0.00 0.00 4.85
9722 19492 3.334583 TTAGAGACACTTGGCATCACC 57.665 47.619 0.00 0.00 39.84 4.02
9771 19541 8.716909 CCAACAAAAACAAGTAAAACTTCATGT 58.283 29.630 0.00 0.00 36.03 3.21
9778 19548 7.078851 CCAAACCCAACAAAAACAAGTAAAAC 58.921 34.615 0.00 0.00 0.00 2.43
9815 19587 4.324267 AGGGTGTGCAGACAGTTAAATAC 58.676 43.478 16.68 0.00 30.74 1.89
9819 19591 4.131596 GTTAAGGGTGTGCAGACAGTTAA 58.868 43.478 16.68 14.48 30.74 2.01
9826 19598 0.250124 CCACGTTAAGGGTGTGCAGA 60.250 55.000 0.00 0.00 33.56 4.26
9829 19601 1.084289 GATCCACGTTAAGGGTGTGC 58.916 55.000 0.00 0.00 33.56 4.57
9888 19660 1.478916 TCATTGCCATTGTCATGCTGG 59.521 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.