Multiple sequence alignment - TraesCS6D01G016500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G016500 | chr6D | 100.000 | 4286 | 0 | 0 | 4370 | 8655 | 6967228 | 6962943 | 0.000000e+00 | 7915 |
1 | TraesCS6D01G016500 | chr6D | 100.000 | 2470 | 0 | 0 | 1 | 2470 | 6971597 | 6969128 | 0.000000e+00 | 4562 |
2 | TraesCS6D01G016500 | chr6D | 100.000 | 1440 | 0 | 0 | 2768 | 4207 | 6968830 | 6967391 | 0.000000e+00 | 2660 |
3 | TraesCS6D01G016500 | chr6D | 92.665 | 559 | 32 | 5 | 1 | 554 | 86649324 | 86649878 | 0.000000e+00 | 797 |
4 | TraesCS6D01G016500 | chr6D | 96.131 | 336 | 13 | 0 | 219 | 554 | 6976609 | 6976274 | 4.570000e-152 | 549 |
5 | TraesCS6D01G016500 | chr6D | 83.333 | 426 | 55 | 15 | 6143 | 6560 | 6965038 | 6965455 | 6.340000e-101 | 379 |
6 | TraesCS6D01G016500 | chr6D | 95.882 | 170 | 7 | 0 | 6149 | 6318 | 111080784 | 111080953 | 8.560000e-70 | 276 |
7 | TraesCS6D01G016500 | chr6D | 89.349 | 169 | 16 | 2 | 6388 | 6555 | 111080951 | 111080784 | 2.450000e-50 | 211 |
8 | TraesCS6D01G016500 | chr3D | 96.562 | 1687 | 44 | 9 | 6976 | 8655 | 586749050 | 586747371 | 0.000000e+00 | 2782 |
9 | TraesCS6D01G016500 | chr3D | 96.023 | 1056 | 36 | 3 | 7604 | 8655 | 586757589 | 586758642 | 0.000000e+00 | 1712 |
10 | TraesCS6D01G016500 | chr3D | 87.215 | 571 | 48 | 19 | 1 | 554 | 56443617 | 56444179 | 2.050000e-175 | 627 |
11 | TraesCS6D01G016500 | chr3D | 83.569 | 566 | 56 | 26 | 1 | 554 | 604597287 | 604597827 | 6.030000e-136 | 496 |
12 | TraesCS6D01G016500 | chr3D | 97.778 | 90 | 2 | 0 | 3579 | 3668 | 203684631 | 203684542 | 1.160000e-33 | 156 |
13 | TraesCS6D01G016500 | chr6B | 88.146 | 1839 | 142 | 42 | 597 | 2395 | 12599650 | 12597848 | 0.000000e+00 | 2119 |
14 | TraesCS6D01G016500 | chr6B | 93.988 | 1314 | 68 | 9 | 6554 | 7858 | 12594509 | 12593198 | 0.000000e+00 | 1978 |
15 | TraesCS6D01G016500 | chr6B | 91.552 | 1231 | 80 | 13 | 4920 | 6149 | 12595707 | 12594500 | 0.000000e+00 | 1676 |
16 | TraesCS6D01G016500 | chr6B | 95.000 | 820 | 34 | 3 | 2769 | 3586 | 12597499 | 12596685 | 0.000000e+00 | 1280 |
17 | TraesCS6D01G016500 | chr6B | 85.549 | 692 | 76 | 8 | 7988 | 8655 | 378281740 | 378282431 | 0.000000e+00 | 702 |
18 | TraesCS6D01G016500 | chr6B | 98.123 | 373 | 6 | 1 | 3814 | 4185 | 12596581 | 12596209 | 0.000000e+00 | 649 |
19 | TraesCS6D01G016500 | chr6B | 92.628 | 312 | 17 | 2 | 4616 | 4924 | 12596047 | 12595739 | 2.220000e-120 | 444 |
20 | TraesCS6D01G016500 | chr6B | 91.411 | 163 | 11 | 3 | 4396 | 4556 | 12596208 | 12596047 | 4.070000e-53 | 220 |
21 | TraesCS6D01G016500 | chr6B | 96.809 | 94 | 3 | 0 | 3579 | 3672 | 617177290 | 617177197 | 3.230000e-34 | 158 |
22 | TraesCS6D01G016500 | chr6B | 96.774 | 93 | 1 | 2 | 3671 | 3762 | 12596681 | 12596590 | 4.180000e-33 | 154 |
23 | TraesCS6D01G016500 | chr6A | 92.039 | 1520 | 82 | 19 | 6565 | 8080 | 6597988 | 6596504 | 0.000000e+00 | 2100 |
24 | TraesCS6D01G016500 | chr6A | 89.609 | 1203 | 83 | 21 | 597 | 1787 | 6609087 | 6607915 | 0.000000e+00 | 1491 |
25 | TraesCS6D01G016500 | chr6A | 92.043 | 930 | 64 | 6 | 4920 | 5846 | 6604929 | 6604007 | 0.000000e+00 | 1299 |
26 | TraesCS6D01G016500 | chr6A | 96.078 | 663 | 18 | 2 | 1802 | 2464 | 6607930 | 6607276 | 0.000000e+00 | 1074 |
27 | TraesCS6D01G016500 | chr6A | 95.487 | 554 | 14 | 8 | 3663 | 4207 | 6606075 | 6605524 | 0.000000e+00 | 874 |
28 | TraesCS6D01G016500 | chr6A | 95.946 | 518 | 19 | 1 | 2786 | 3301 | 6606968 | 6606451 | 0.000000e+00 | 839 |
29 | TraesCS6D01G016500 | chr6A | 90.018 | 551 | 52 | 2 | 4377 | 4924 | 6605510 | 6604960 | 0.000000e+00 | 710 |
30 | TraesCS6D01G016500 | chr6A | 93.473 | 383 | 19 | 4 | 8275 | 8655 | 6596503 | 6596125 | 1.630000e-156 | 564 |
31 | TraesCS6D01G016500 | chr6A | 97.865 | 281 | 6 | 0 | 3300 | 3580 | 6606354 | 6606074 | 3.630000e-133 | 486 |
32 | TraesCS6D01G016500 | chr6A | 90.043 | 231 | 22 | 1 | 8417 | 8646 | 615289509 | 615289739 | 1.830000e-76 | 298 |
33 | TraesCS6D01G016500 | chr1B | 86.029 | 816 | 90 | 7 | 7864 | 8655 | 104738537 | 104737722 | 0.000000e+00 | 854 |
34 | TraesCS6D01G016500 | chr2D | 85.575 | 818 | 90 | 13 | 7865 | 8655 | 22936670 | 22935854 | 0.000000e+00 | 832 |
35 | TraesCS6D01G016500 | chr2D | 90.485 | 536 | 40 | 8 | 24 | 554 | 620390650 | 620390121 | 0.000000e+00 | 697 |
36 | TraesCS6D01G016500 | chr2D | 90.435 | 115 | 9 | 2 | 3552 | 3664 | 353280942 | 353281056 | 5.410000e-32 | 150 |
37 | TraesCS6D01G016500 | chr2D | 94.792 | 96 | 4 | 1 | 3574 | 3669 | 307490081 | 307490175 | 1.950000e-31 | 148 |
38 | TraesCS6D01G016500 | chr4B | 85.244 | 820 | 96 | 8 | 7860 | 8655 | 604295222 | 604294404 | 0.000000e+00 | 821 |
39 | TraesCS6D01G016500 | chr7D | 85.135 | 814 | 96 | 8 | 7866 | 8655 | 9173583 | 9172771 | 0.000000e+00 | 809 |
40 | TraesCS6D01G016500 | chr7D | 87.166 | 561 | 37 | 19 | 1 | 554 | 623402702 | 623403234 | 9.610000e-169 | 604 |
41 | TraesCS6D01G016500 | chr7D | 93.558 | 326 | 17 | 2 | 230 | 554 | 623397753 | 623398075 | 4.700000e-132 | 483 |
42 | TraesCS6D01G016500 | chr7D | 84.910 | 444 | 46 | 17 | 119 | 554 | 84413668 | 84414098 | 6.210000e-116 | 429 |
43 | TraesCS6D01G016500 | chr7D | 96.000 | 100 | 2 | 2 | 3566 | 3665 | 414277587 | 414277684 | 2.500000e-35 | 161 |
44 | TraesCS6D01G016500 | chr2B | 84.681 | 816 | 100 | 8 | 7864 | 8655 | 519127698 | 519126884 | 0.000000e+00 | 791 |
45 | TraesCS6D01G016500 | chr2B | 84.088 | 817 | 99 | 9 | 7869 | 8655 | 796951425 | 796952240 | 0.000000e+00 | 760 |
46 | TraesCS6D01G016500 | chr2B | 98.182 | 165 | 3 | 0 | 6154 | 6318 | 30418863 | 30419027 | 1.100000e-73 | 289 |
47 | TraesCS6D01G016500 | chr2B | 88.546 | 227 | 18 | 5 | 6324 | 6550 | 30419188 | 30419406 | 1.430000e-67 | 268 |
48 | TraesCS6D01G016500 | chr2B | 85.526 | 228 | 23 | 7 | 6324 | 6550 | 30419081 | 30418863 | 6.760000e-56 | 230 |
49 | TraesCS6D01G016500 | chr2B | 91.071 | 168 | 13 | 2 | 6154 | 6320 | 30419406 | 30419240 | 8.740000e-55 | 226 |
50 | TraesCS6D01G016500 | chr2B | 93.939 | 99 | 5 | 1 | 3571 | 3669 | 362897732 | 362897635 | 1.950000e-31 | 148 |
51 | TraesCS6D01G016500 | chr2B | 92.222 | 90 | 5 | 2 | 6310 | 6397 | 30419143 | 30419232 | 9.120000e-25 | 126 |
52 | TraesCS6D01G016500 | chr3B | 85.785 | 605 | 62 | 10 | 7864 | 8444 | 730718204 | 730718808 | 3.430000e-173 | 619 |
53 | TraesCS6D01G016500 | chr3B | 91.667 | 168 | 10 | 2 | 6154 | 6320 | 625210930 | 625211094 | 6.760000e-56 | 230 |
54 | TraesCS6D01G016500 | chr3B | 91.018 | 167 | 13 | 2 | 6154 | 6320 | 228677690 | 228677526 | 3.140000e-54 | 224 |
55 | TraesCS6D01G016500 | chr3B | 92.405 | 158 | 11 | 1 | 6388 | 6545 | 625211309 | 625211465 | 3.140000e-54 | 224 |
56 | TraesCS6D01G016500 | chr3B | 81.641 | 256 | 20 | 5 | 6318 | 6550 | 625211181 | 625210930 | 4.130000e-43 | 187 |
57 | TraesCS6D01G016500 | chr3B | 78.740 | 254 | 31 | 3 | 6318 | 6550 | 228677439 | 228677690 | 1.950000e-31 | 148 |
58 | TraesCS6D01G016500 | chr2A | 89.579 | 451 | 29 | 11 | 116 | 554 | 714640239 | 714640683 | 2.730000e-154 | 556 |
59 | TraesCS6D01G016500 | chr5D | 91.139 | 395 | 25 | 8 | 164 | 554 | 416051123 | 416051511 | 2.140000e-145 | 527 |
60 | TraesCS6D01G016500 | chr5D | 79.197 | 548 | 78 | 28 | 24 | 550 | 529039404 | 529039936 | 1.790000e-91 | 348 |
61 | TraesCS6D01G016500 | chr5D | 86.486 | 222 | 21 | 6 | 6329 | 6550 | 544235571 | 544235359 | 1.450000e-57 | 235 |
62 | TraesCS6D01G016500 | chr5D | 91.071 | 168 | 12 | 3 | 6154 | 6320 | 544235359 | 544235524 | 3.140000e-54 | 224 |
63 | TraesCS6D01G016500 | chr5D | 80.876 | 251 | 23 | 6 | 6324 | 6551 | 544235675 | 544235923 | 3.210000e-39 | 174 |
64 | TraesCS6D01G016500 | chr3A | 80.208 | 576 | 82 | 28 | 1 | 554 | 1858599 | 1859164 | 3.760000e-108 | 403 |
65 | TraesCS6D01G016500 | chr4A | 97.041 | 169 | 5 | 0 | 6152 | 6320 | 724693915 | 724694083 | 1.420000e-72 | 285 |
66 | TraesCS6D01G016500 | chr4A | 87.866 | 239 | 18 | 8 | 6318 | 6554 | 724694207 | 724694436 | 3.980000e-68 | 270 |
67 | TraesCS6D01G016500 | chr4A | 83.594 | 256 | 21 | 5 | 6318 | 6552 | 724694170 | 724693915 | 4.070000e-53 | 220 |
68 | TraesCS6D01G016500 | chr7A | 95.808 | 167 | 7 | 0 | 6154 | 6320 | 566511344 | 566511178 | 3.980000e-68 | 270 |
69 | TraesCS6D01G016500 | chr7A | 97.778 | 90 | 2 | 0 | 3579 | 3668 | 83936191 | 83936102 | 1.160000e-33 | 156 |
70 | TraesCS6D01G016500 | chr7A | 94.000 | 100 | 5 | 1 | 3573 | 3671 | 124792536 | 124792635 | 5.410000e-32 | 150 |
71 | TraesCS6D01G016500 | chr7A | 72.552 | 572 | 115 | 37 | 1 | 554 | 68183544 | 68184091 | 1.950000e-31 | 148 |
72 | TraesCS6D01G016500 | chr7B | 85.490 | 255 | 15 | 2 | 6318 | 6551 | 569974728 | 569974981 | 6.710000e-61 | 246 |
73 | TraesCS6D01G016500 | chr7B | 84.141 | 227 | 24 | 8 | 6324 | 6548 | 569974656 | 569974440 | 8.800000e-50 | 209 |
74 | TraesCS6D01G016500 | chr4D | 98.851 | 87 | 1 | 0 | 3579 | 3665 | 28237894 | 28237808 | 1.160000e-33 | 156 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G016500 | chr6D | 6962943 | 6971597 | 8654 | True | 5045.666667 | 7915 | 100.000000 | 1 | 8655 | 3 | chr6D.!!$R3 | 8654 |
1 | TraesCS6D01G016500 | chr6D | 86649324 | 86649878 | 554 | False | 797.000000 | 797 | 92.665000 | 1 | 554 | 1 | chr6D.!!$F2 | 553 |
2 | TraesCS6D01G016500 | chr3D | 586747371 | 586749050 | 1679 | True | 2782.000000 | 2782 | 96.562000 | 6976 | 8655 | 1 | chr3D.!!$R2 | 1679 |
3 | TraesCS6D01G016500 | chr3D | 586757589 | 586758642 | 1053 | False | 1712.000000 | 1712 | 96.023000 | 7604 | 8655 | 1 | chr3D.!!$F2 | 1051 |
4 | TraesCS6D01G016500 | chr3D | 56443617 | 56444179 | 562 | False | 627.000000 | 627 | 87.215000 | 1 | 554 | 1 | chr3D.!!$F1 | 553 |
5 | TraesCS6D01G016500 | chr3D | 604597287 | 604597827 | 540 | False | 496.000000 | 496 | 83.569000 | 1 | 554 | 1 | chr3D.!!$F3 | 553 |
6 | TraesCS6D01G016500 | chr6B | 12593198 | 12599650 | 6452 | True | 1065.000000 | 2119 | 93.452750 | 597 | 7858 | 8 | chr6B.!!$R2 | 7261 |
7 | TraesCS6D01G016500 | chr6B | 378281740 | 378282431 | 691 | False | 702.000000 | 702 | 85.549000 | 7988 | 8655 | 1 | chr6B.!!$F1 | 667 |
8 | TraesCS6D01G016500 | chr6A | 6596125 | 6597988 | 1863 | True | 1332.000000 | 2100 | 92.756000 | 6565 | 8655 | 2 | chr6A.!!$R1 | 2090 |
9 | TraesCS6D01G016500 | chr6A | 6604007 | 6609087 | 5080 | True | 967.571429 | 1491 | 93.863714 | 597 | 5846 | 7 | chr6A.!!$R2 | 5249 |
10 | TraesCS6D01G016500 | chr1B | 104737722 | 104738537 | 815 | True | 854.000000 | 854 | 86.029000 | 7864 | 8655 | 1 | chr1B.!!$R1 | 791 |
11 | TraesCS6D01G016500 | chr2D | 22935854 | 22936670 | 816 | True | 832.000000 | 832 | 85.575000 | 7865 | 8655 | 1 | chr2D.!!$R1 | 790 |
12 | TraesCS6D01G016500 | chr2D | 620390121 | 620390650 | 529 | True | 697.000000 | 697 | 90.485000 | 24 | 554 | 1 | chr2D.!!$R2 | 530 |
13 | TraesCS6D01G016500 | chr4B | 604294404 | 604295222 | 818 | True | 821.000000 | 821 | 85.244000 | 7860 | 8655 | 1 | chr4B.!!$R1 | 795 |
14 | TraesCS6D01G016500 | chr7D | 9172771 | 9173583 | 812 | True | 809.000000 | 809 | 85.135000 | 7866 | 8655 | 1 | chr7D.!!$R1 | 789 |
15 | TraesCS6D01G016500 | chr7D | 623402702 | 623403234 | 532 | False | 604.000000 | 604 | 87.166000 | 1 | 554 | 1 | chr7D.!!$F4 | 553 |
16 | TraesCS6D01G016500 | chr2B | 519126884 | 519127698 | 814 | True | 791.000000 | 791 | 84.681000 | 7864 | 8655 | 1 | chr2B.!!$R2 | 791 |
17 | TraesCS6D01G016500 | chr2B | 796951425 | 796952240 | 815 | False | 760.000000 | 760 | 84.088000 | 7869 | 8655 | 1 | chr2B.!!$F1 | 786 |
18 | TraesCS6D01G016500 | chr2B | 30418863 | 30419406 | 543 | True | 228.000000 | 230 | 88.298500 | 6154 | 6550 | 2 | chr2B.!!$R3 | 396 |
19 | TraesCS6D01G016500 | chr2B | 30418863 | 30419406 | 543 | False | 227.666667 | 289 | 92.983333 | 6154 | 6550 | 3 | chr2B.!!$F2 | 396 |
20 | TraesCS6D01G016500 | chr3B | 730718204 | 730718808 | 604 | False | 619.000000 | 619 | 85.785000 | 7864 | 8444 | 1 | chr3B.!!$F2 | 580 |
21 | TraesCS6D01G016500 | chr3B | 625210930 | 625211465 | 535 | False | 227.000000 | 230 | 92.036000 | 6154 | 6545 | 2 | chr3B.!!$F3 | 391 |
22 | TraesCS6D01G016500 | chr5D | 529039404 | 529039936 | 532 | False | 348.000000 | 348 | 79.197000 | 24 | 550 | 1 | chr5D.!!$F2 | 526 |
23 | TraesCS6D01G016500 | chr3A | 1858599 | 1859164 | 565 | False | 403.000000 | 403 | 80.208000 | 1 | 554 | 1 | chr3A.!!$F1 | 553 |
24 | TraesCS6D01G016500 | chr4A | 724693915 | 724694436 | 521 | False | 277.500000 | 285 | 92.453500 | 6152 | 6554 | 2 | chr4A.!!$F1 | 402 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
336 | 406 | 0.179037 | ATGGTGATGGCAGATCGTGG | 60.179 | 55.000 | 0.00 | 0.0 | 0.00 | 4.94 | F |
591 | 674 | 0.250901 | GGCTTGGCCCATCGTATCAT | 60.251 | 55.000 | 0.00 | 0.0 | 44.06 | 2.45 | F |
1585 | 1706 | 0.809385 | CGCGGTACTCCTTTCTCTGA | 59.191 | 55.000 | 0.00 | 0.0 | 0.00 | 3.27 | F |
1811 | 1938 | 1.584175 | TTGCGGTTGCTCTTTTACGA | 58.416 | 45.000 | 0.00 | 0.0 | 43.34 | 3.43 | F |
3595 | 3830 | 0.115745 | ACTACTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.0 | 0.00 | 3.28 | F |
3596 | 3831 | 1.272807 | CTACTCCCTCCGTCCCAAAA | 58.727 | 55.000 | 0.00 | 0.0 | 0.00 | 2.44 | F |
4595 | 4842 | 0.032403 | CCGTACAAGTGACCACCGAA | 59.968 | 55.000 | 0.00 | 0.0 | 0.00 | 4.30 | F |
5682 | 6032 | 1.068588 | GACGGCCACTGCTATATGACA | 59.931 | 52.381 | 2.24 | 0.0 | 37.74 | 3.58 | F |
5959 | 6310 | 0.605589 | GGGTGTGAGAGGAGAGTGTG | 59.394 | 60.000 | 0.00 | 0.0 | 0.00 | 3.82 | F |
6002 | 6353 | 1.134848 | GCCTTGTTGTTTGGCTTGTCA | 60.135 | 47.619 | 0.00 | 0.0 | 43.05 | 3.58 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1792 | 1919 | 1.584175 | TCGTAAAAGAGCAACCGCAA | 58.416 | 45.000 | 0.00 | 0.0 | 42.27 | 4.85 | R |
1793 | 1920 | 1.803334 | ATCGTAAAAGAGCAACCGCA | 58.197 | 45.000 | 0.00 | 0.0 | 42.27 | 5.69 | R |
3581 | 3816 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.0 | 0.00 | 4.20 | R |
3647 | 3882 | 0.635009 | AGATACTCCCTCCGTCCCAA | 59.365 | 55.000 | 0.00 | 0.0 | 0.00 | 4.12 | R |
4576 | 4823 | 0.032403 | TTCGGTGGTCACTTGTACGG | 59.968 | 55.000 | 0.93 | 0.0 | 0.00 | 4.02 | R |
5231 | 5580 | 0.249120 | TGGCGTTAGATGACAGGTGG | 59.751 | 55.000 | 0.00 | 0.0 | 0.00 | 4.61 | R |
5862 | 6213 | 0.393820 | CACAAAGGCAATGCTGGGTT | 59.606 | 50.000 | 4.82 | 0.0 | 0.00 | 4.11 | R |
6623 | 7123 | 0.035343 | GGGGAGGTTAGTTGGACTGC | 60.035 | 60.000 | 0.00 | 0.0 | 0.00 | 4.40 | R |
6953 | 7454 | 0.586319 | ACTGTGATCAACGCAAACGG | 59.414 | 50.000 | 0.00 | 0.0 | 46.04 | 4.44 | R |
7995 | 8513 | 1.871772 | CCGCTTTGGTTCAGCTCAG | 59.128 | 57.895 | 0.00 | 0.0 | 34.88 | 3.35 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
311 | 375 | 3.149648 | GGTGGCCATGGTGGATGC | 61.150 | 66.667 | 9.72 | 0.00 | 40.96 | 3.91 |
317 | 381 | 4.854924 | CATGGTGGATGCCGGCGA | 62.855 | 66.667 | 23.90 | 11.80 | 0.00 | 5.54 |
336 | 406 | 0.179037 | ATGGTGATGGCAGATCGTGG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
338 | 408 | 2.182842 | GTGATGGCAGATCGTGGGC | 61.183 | 63.158 | 0.00 | 2.45 | 0.00 | 5.36 |
467 | 547 | 5.964477 | CCAGCCCCCATCTCTTTATATAGTA | 59.036 | 44.000 | 0.00 | 0.00 | 0.00 | 1.82 |
559 | 642 | 2.597340 | CCGTTGGGCCCAGATCAT | 59.403 | 61.111 | 26.87 | 0.00 | 0.00 | 2.45 |
560 | 643 | 1.526917 | CCGTTGGGCCCAGATCATC | 60.527 | 63.158 | 26.87 | 11.27 | 0.00 | 2.92 |
561 | 644 | 1.526917 | CGTTGGGCCCAGATCATCC | 60.527 | 63.158 | 26.87 | 7.13 | 0.00 | 3.51 |
562 | 645 | 1.925888 | GTTGGGCCCAGATCATCCT | 59.074 | 57.895 | 26.87 | 0.00 | 0.00 | 3.24 |
563 | 646 | 1.140312 | GTTGGGCCCAGATCATCCTA | 58.860 | 55.000 | 26.87 | 3.16 | 0.00 | 2.94 |
564 | 647 | 1.494721 | GTTGGGCCCAGATCATCCTAA | 59.505 | 52.381 | 26.87 | 2.24 | 0.00 | 2.69 |
565 | 648 | 1.140312 | TGGGCCCAGATCATCCTAAC | 58.860 | 55.000 | 24.45 | 0.00 | 0.00 | 2.34 |
566 | 649 | 1.140312 | GGGCCCAGATCATCCTAACA | 58.860 | 55.000 | 19.95 | 0.00 | 0.00 | 2.41 |
567 | 650 | 1.202818 | GGGCCCAGATCATCCTAACAC | 60.203 | 57.143 | 19.95 | 0.00 | 0.00 | 3.32 |
568 | 651 | 1.771255 | GGCCCAGATCATCCTAACACT | 59.229 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
569 | 652 | 2.224402 | GGCCCAGATCATCCTAACACTC | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
570 | 653 | 2.224402 | GCCCAGATCATCCTAACACTCC | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
571 | 654 | 2.370189 | CCCAGATCATCCTAACACTCCC | 59.630 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
572 | 655 | 2.036475 | CCAGATCATCCTAACACTCCCG | 59.964 | 54.545 | 0.00 | 0.00 | 0.00 | 5.14 |
573 | 656 | 2.036475 | CAGATCATCCTAACACTCCCGG | 59.964 | 54.545 | 0.00 | 0.00 | 0.00 | 5.73 |
574 | 657 | 0.759346 | ATCATCCTAACACTCCCGGC | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
575 | 658 | 0.325296 | TCATCCTAACACTCCCGGCT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
576 | 659 | 0.541863 | CATCCTAACACTCCCGGCTT | 59.458 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
577 | 660 | 0.541863 | ATCCTAACACTCCCGGCTTG | 59.458 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
578 | 661 | 1.078426 | CCTAACACTCCCGGCTTGG | 60.078 | 63.158 | 0.00 | 0.00 | 37.55 | 3.61 |
579 | 662 | 1.745489 | CTAACACTCCCGGCTTGGC | 60.745 | 63.158 | 0.00 | 0.00 | 35.87 | 4.52 |
580 | 663 | 3.262448 | TAACACTCCCGGCTTGGCC | 62.262 | 63.158 | 0.00 | 0.00 | 46.75 | 5.36 |
589 | 672 | 4.065110 | GGCTTGGCCCATCGTATC | 57.935 | 61.111 | 0.00 | 0.00 | 44.06 | 2.24 |
590 | 673 | 1.148273 | GGCTTGGCCCATCGTATCA | 59.852 | 57.895 | 0.00 | 0.00 | 44.06 | 2.15 |
591 | 674 | 0.250901 | GGCTTGGCCCATCGTATCAT | 60.251 | 55.000 | 0.00 | 0.00 | 44.06 | 2.45 |
592 | 675 | 1.003118 | GGCTTGGCCCATCGTATCATA | 59.997 | 52.381 | 0.00 | 0.00 | 44.06 | 2.15 |
593 | 676 | 2.552155 | GGCTTGGCCCATCGTATCATAA | 60.552 | 50.000 | 0.00 | 0.00 | 44.06 | 1.90 |
594 | 677 | 2.484264 | GCTTGGCCCATCGTATCATAAC | 59.516 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
595 | 678 | 3.738982 | CTTGGCCCATCGTATCATAACA | 58.261 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
613 | 696 | 2.825836 | CTGAATCTGCGTGCCCCC | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
614 | 697 | 3.329889 | TGAATCTGCGTGCCCCCT | 61.330 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
616 | 699 | 1.223487 | GAATCTGCGTGCCCCCTTA | 59.777 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
617 | 700 | 1.077716 | AATCTGCGTGCCCCCTTAC | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 2.34 |
618 | 701 | 2.552231 | AATCTGCGTGCCCCCTTACC | 62.552 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
619 | 702 | 4.796495 | CTGCGTGCCCCCTTACCC | 62.796 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
653 | 743 | 3.072468 | CTCACCCCTAACCGGCGA | 61.072 | 66.667 | 9.30 | 0.00 | 0.00 | 5.54 |
656 | 746 | 4.709604 | ACCCCTAACCGGCGACCT | 62.710 | 66.667 | 9.30 | 0.00 | 0.00 | 3.85 |
712 | 802 | 2.430244 | CCGTCCACCGTCTTCACG | 60.430 | 66.667 | 0.00 | 0.00 | 46.29 | 4.35 |
731 | 821 | 4.996434 | CGGCGGCCATCCATCTCC | 62.996 | 72.222 | 20.71 | 0.00 | 0.00 | 3.71 |
762 | 852 | 1.153706 | GACGGGTATGTGGACCACG | 60.154 | 63.158 | 19.67 | 9.14 | 41.73 | 4.94 |
796 | 886 | 5.011023 | CCAAGCCCTAATAATCCCACAAATC | 59.989 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
810 | 900 | 3.119637 | CCACAAATCGCCGTCCTAAAATT | 60.120 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
1101 | 1214 | 1.715519 | CGCTTGTTGCTGCATTTACAC | 59.284 | 47.619 | 1.84 | 0.00 | 40.11 | 2.90 |
1115 | 1228 | 6.639563 | TGCATTTACACTGTCTAATCTAGCA | 58.360 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
1139 | 1253 | 7.414540 | GCAGAATTAATACACCAGGAACTCAAG | 60.415 | 40.741 | 0.00 | 0.00 | 34.60 | 3.02 |
1164 | 1282 | 6.399639 | TTCACAATTCTTCCAGTTTAACCC | 57.600 | 37.500 | 0.00 | 0.00 | 0.00 | 4.11 |
1237 | 1355 | 9.964303 | CATTATCAGAGCTGGTATACTATCATC | 57.036 | 37.037 | 2.25 | 0.00 | 0.00 | 2.92 |
1255 | 1375 | 7.821359 | ACTATCATCTACACACATATGGATTGC | 59.179 | 37.037 | 7.80 | 0.00 | 0.00 | 3.56 |
1257 | 1377 | 7.301868 | TCATCTACACACATATGGATTGCTA | 57.698 | 36.000 | 7.80 | 0.00 | 0.00 | 3.49 |
1264 | 1384 | 8.158169 | ACACACATATGGATTGCTATTGTAAG | 57.842 | 34.615 | 7.80 | 0.00 | 0.00 | 2.34 |
1269 | 1389 | 9.632638 | ACATATGGATTGCTATTGTAAGTCTTT | 57.367 | 29.630 | 7.80 | 0.00 | 0.00 | 2.52 |
1277 | 1397 | 7.609760 | TGCTATTGTAAGTCTTTGGTGTATG | 57.390 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
1285 | 1405 | 6.767524 | AAGTCTTTGGTGTATGTGTTTTGA | 57.232 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
1307 | 1427 | 1.191535 | GGTGTTAATTGCCTTCCCCC | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1310 | 1430 | 0.824109 | GTTAATTGCCTTCCCCCTGC | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1372 | 1492 | 1.400494 | ACAAAACTTGAGACCACACGC | 59.600 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
1373 | 1493 | 1.670811 | CAAAACTTGAGACCACACGCT | 59.329 | 47.619 | 0.00 | 0.00 | 0.00 | 5.07 |
1439 | 1559 | 7.688918 | ATATCTCCACTCTCAAGGAATCTTT | 57.311 | 36.000 | 0.00 | 0.00 | 32.57 | 2.52 |
1469 | 1590 | 7.386851 | CCTTACCCACATGTTATCGATTCTAT | 58.613 | 38.462 | 1.71 | 0.00 | 0.00 | 1.98 |
1475 | 1596 | 6.648310 | CCACATGTTATCGATTCTATGAAGCT | 59.352 | 38.462 | 1.71 | 0.00 | 0.00 | 3.74 |
1512 | 1633 | 5.503002 | TCTTACCCATAGTTGCCCTTTTAC | 58.497 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
1585 | 1706 | 0.809385 | CGCGGTACTCCTTTCTCTGA | 59.191 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1652 | 1775 | 1.739562 | CGACTCAGCTGGCCAACTC | 60.740 | 63.158 | 15.13 | 0.00 | 0.00 | 3.01 |
1670 | 1793 | 7.309194 | GGCCAACTCAGTGTTTATTGATTTACT | 60.309 | 37.037 | 0.00 | 0.00 | 36.63 | 2.24 |
1748 | 1875 | 4.873746 | ACTCTGTTCAAACTGCTAGCTA | 57.126 | 40.909 | 17.23 | 1.31 | 0.00 | 3.32 |
1810 | 1937 | 2.392933 | TTTGCGGTTGCTCTTTTACG | 57.607 | 45.000 | 0.00 | 0.00 | 43.34 | 3.18 |
1811 | 1938 | 1.584175 | TTGCGGTTGCTCTTTTACGA | 58.416 | 45.000 | 0.00 | 0.00 | 43.34 | 3.43 |
1812 | 1939 | 1.803334 | TGCGGTTGCTCTTTTACGAT | 58.197 | 45.000 | 0.00 | 0.00 | 43.34 | 3.73 |
1813 | 1940 | 2.962125 | TGCGGTTGCTCTTTTACGATA | 58.038 | 42.857 | 0.00 | 0.00 | 43.34 | 2.92 |
1814 | 1941 | 2.669434 | TGCGGTTGCTCTTTTACGATAC | 59.331 | 45.455 | 0.00 | 0.00 | 43.34 | 2.24 |
1815 | 1942 | 2.928116 | GCGGTTGCTCTTTTACGATACT | 59.072 | 45.455 | 0.00 | 0.00 | 38.39 | 2.12 |
1816 | 1943 | 3.370061 | GCGGTTGCTCTTTTACGATACTT | 59.630 | 43.478 | 0.00 | 0.00 | 38.39 | 2.24 |
1817 | 1944 | 4.563976 | GCGGTTGCTCTTTTACGATACTTA | 59.436 | 41.667 | 0.00 | 0.00 | 38.39 | 2.24 |
1839 | 1966 | 8.114651 | ACTTAATCAGAGCATTAAGCCTCTCAC | 61.115 | 40.741 | 12.01 | 0.00 | 44.95 | 3.51 |
1863 | 1990 | 2.079170 | TTCCAATGTGGGAAACTGCA | 57.921 | 45.000 | 0.00 | 0.00 | 43.77 | 4.41 |
1910 | 2038 | 8.780249 | TCATTTAAACTAGGTGCTTAAACAGTC | 58.220 | 33.333 | 0.00 | 0.00 | 31.55 | 3.51 |
1930 | 2058 | 4.584743 | AGTCACAATTTCCTTGGTCCTTTC | 59.415 | 41.667 | 0.00 | 0.00 | 39.30 | 2.62 |
1931 | 2059 | 4.584743 | GTCACAATTTCCTTGGTCCTTTCT | 59.415 | 41.667 | 0.00 | 0.00 | 39.30 | 2.52 |
2467 | 2601 | 9.829507 | CTGAGATGATTTTTCCTGAAGTATAGT | 57.170 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
2468 | 2602 | 9.605275 | TGAGATGATTTTTCCTGAAGTATAGTG | 57.395 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2469 | 2603 | 9.606631 | GAGATGATTTTTCCTGAAGTATAGTGT | 57.393 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2833 | 2967 | 5.784578 | ATATGTGGACGCATGACTAGTAA | 57.215 | 39.130 | 8.52 | 0.00 | 0.00 | 2.24 |
2970 | 3106 | 4.022849 | GCTTCAGCACCTTTGATGTTTACT | 60.023 | 41.667 | 0.00 | 0.00 | 40.24 | 2.24 |
3145 | 3281 | 3.583806 | TGCGGCTTTAACATCAAATTGG | 58.416 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
3193 | 3329 | 5.006386 | TCCACCATTTTTGCAAAAACACTT | 58.994 | 33.333 | 33.34 | 18.65 | 40.33 | 3.16 |
3201 | 3337 | 6.804534 | TTTTGCAAAAACACTTACAGATCG | 57.195 | 33.333 | 21.94 | 0.00 | 0.00 | 3.69 |
3581 | 3816 | 9.700831 | AAAATGGCAGATCCTTTATTTACTACT | 57.299 | 29.630 | 0.00 | 0.00 | 32.46 | 2.57 |
3582 | 3817 | 8.910351 | AATGGCAGATCCTTTATTTACTACTC | 57.090 | 34.615 | 0.00 | 0.00 | 35.26 | 2.59 |
3583 | 3818 | 6.827727 | TGGCAGATCCTTTATTTACTACTCC | 58.172 | 40.000 | 0.00 | 0.00 | 35.26 | 3.85 |
3584 | 3819 | 6.183361 | TGGCAGATCCTTTATTTACTACTCCC | 60.183 | 42.308 | 0.00 | 0.00 | 35.26 | 4.30 |
3585 | 3820 | 6.043358 | GGCAGATCCTTTATTTACTACTCCCT | 59.957 | 42.308 | 0.00 | 0.00 | 0.00 | 4.20 |
3586 | 3821 | 7.156000 | GCAGATCCTTTATTTACTACTCCCTC | 58.844 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
3587 | 3822 | 7.672240 | CAGATCCTTTATTTACTACTCCCTCC | 58.328 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
3588 | 3823 | 6.494146 | AGATCCTTTATTTACTACTCCCTCCG | 59.506 | 42.308 | 0.00 | 0.00 | 0.00 | 4.63 |
3589 | 3824 | 5.522641 | TCCTTTATTTACTACTCCCTCCGT | 58.477 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
3590 | 3825 | 5.595952 | TCCTTTATTTACTACTCCCTCCGTC | 59.404 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3591 | 3826 | 5.221402 | CCTTTATTTACTACTCCCTCCGTCC | 60.221 | 48.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3592 | 3827 | 2.149973 | TTTACTACTCCCTCCGTCCC | 57.850 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3593 | 3828 | 1.002069 | TTACTACTCCCTCCGTCCCA | 58.998 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
3594 | 3829 | 1.002069 | TACTACTCCCTCCGTCCCAA | 58.998 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
3595 | 3830 | 0.115745 | ACTACTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3596 | 3831 | 1.272807 | CTACTCCCTCCGTCCCAAAA | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3597 | 3832 | 1.838077 | CTACTCCCTCCGTCCCAAAAT | 59.162 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
3598 | 3833 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3599 | 3834 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
3600 | 3835 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3601 | 3836 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3602 | 3837 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3603 | 3838 | 2.026636 | CCCTCCGTCCCAAAATAAGTGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3604 | 3839 | 3.007635 | CCTCCGTCCCAAAATAAGTGAC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3605 | 3840 | 3.307480 | CCTCCGTCCCAAAATAAGTGACT | 60.307 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3606 | 3841 | 3.933332 | CTCCGTCCCAAAATAAGTGACTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3607 | 3842 | 3.325425 | TCCGTCCCAAAATAAGTGACTCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3608 | 3843 | 4.069304 | CCGTCCCAAAATAAGTGACTCAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3609 | 3844 | 4.083484 | CCGTCCCAAAATAAGTGACTCAAC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3610 | 3845 | 4.755123 | CGTCCCAAAATAAGTGACTCAACT | 59.245 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
3611 | 3846 | 5.238650 | CGTCCCAAAATAAGTGACTCAACTT | 59.761 | 40.000 | 0.00 | 0.00 | 42.89 | 2.66 |
3612 | 3847 | 6.238648 | CGTCCCAAAATAAGTGACTCAACTTT | 60.239 | 38.462 | 0.00 | 0.00 | 40.77 | 2.66 |
3613 | 3848 | 6.918022 | GTCCCAAAATAAGTGACTCAACTTTG | 59.082 | 38.462 | 0.00 | 0.00 | 40.77 | 2.77 |
3614 | 3849 | 6.605594 | TCCCAAAATAAGTGACTCAACTTTGT | 59.394 | 34.615 | 0.00 | 0.00 | 40.77 | 2.83 |
3615 | 3850 | 7.776030 | TCCCAAAATAAGTGACTCAACTTTGTA | 59.224 | 33.333 | 0.00 | 0.00 | 40.77 | 2.41 |
3616 | 3851 | 7.860872 | CCCAAAATAAGTGACTCAACTTTGTAC | 59.139 | 37.037 | 0.00 | 0.00 | 40.77 | 2.90 |
3617 | 3852 | 8.621286 | CCAAAATAAGTGACTCAACTTTGTACT | 58.379 | 33.333 | 0.00 | 0.00 | 40.77 | 2.73 |
3622 | 3857 | 6.846325 | AGTGACTCAACTTTGTACTAAAGC | 57.154 | 37.500 | 14.06 | 0.00 | 0.00 | 3.51 |
3623 | 3858 | 6.583562 | AGTGACTCAACTTTGTACTAAAGCT | 58.416 | 36.000 | 14.06 | 3.86 | 0.00 | 3.74 |
3624 | 3859 | 7.723324 | AGTGACTCAACTTTGTACTAAAGCTA | 58.277 | 34.615 | 14.06 | 3.93 | 0.00 | 3.32 |
3625 | 3860 | 7.868415 | AGTGACTCAACTTTGTACTAAAGCTAG | 59.132 | 37.037 | 14.06 | 11.78 | 0.00 | 3.42 |
3626 | 3861 | 7.652507 | GTGACTCAACTTTGTACTAAAGCTAGT | 59.347 | 37.037 | 14.06 | 13.80 | 41.43 | 2.57 |
3627 | 3862 | 8.853126 | TGACTCAACTTTGTACTAAAGCTAGTA | 58.147 | 33.333 | 14.06 | 0.00 | 39.23 | 1.82 |
3641 | 3876 | 8.989980 | ACTAAAGCTAGTACAAATTTGAGTCAC | 58.010 | 33.333 | 24.64 | 14.81 | 36.56 | 3.67 |
3642 | 3877 | 9.209175 | CTAAAGCTAGTACAAATTTGAGTCACT | 57.791 | 33.333 | 24.64 | 19.94 | 0.00 | 3.41 |
3643 | 3878 | 8.451908 | AAAGCTAGTACAAATTTGAGTCACTT | 57.548 | 30.769 | 24.64 | 15.54 | 0.00 | 3.16 |
3644 | 3879 | 9.555727 | AAAGCTAGTACAAATTTGAGTCACTTA | 57.444 | 29.630 | 24.64 | 1.89 | 0.00 | 2.24 |
3645 | 3880 | 9.726438 | AAGCTAGTACAAATTTGAGTCACTTAT | 57.274 | 29.630 | 24.64 | 1.42 | 0.00 | 1.73 |
3646 | 3881 | 9.726438 | AGCTAGTACAAATTTGAGTCACTTATT | 57.274 | 29.630 | 24.64 | 4.40 | 0.00 | 1.40 |
3650 | 3885 | 9.965824 | AGTACAAATTTGAGTCACTTATTTTGG | 57.034 | 29.630 | 24.64 | 0.00 | 0.00 | 3.28 |
3651 | 3886 | 9.191995 | GTACAAATTTGAGTCACTTATTTTGGG | 57.808 | 33.333 | 24.64 | 0.00 | 0.00 | 4.12 |
3652 | 3887 | 8.017418 | ACAAATTTGAGTCACTTATTTTGGGA | 57.983 | 30.769 | 24.64 | 0.00 | 0.00 | 4.37 |
3653 | 3888 | 7.926018 | ACAAATTTGAGTCACTTATTTTGGGAC | 59.074 | 33.333 | 24.64 | 0.00 | 0.00 | 4.46 |
3654 | 3889 | 5.682943 | TTTGAGTCACTTATTTTGGGACG | 57.317 | 39.130 | 0.00 | 0.00 | 33.84 | 4.79 |
3655 | 3890 | 3.670625 | TGAGTCACTTATTTTGGGACGG | 58.329 | 45.455 | 0.00 | 0.00 | 33.84 | 4.79 |
3656 | 3891 | 3.325425 | TGAGTCACTTATTTTGGGACGGA | 59.675 | 43.478 | 0.00 | 0.00 | 33.84 | 4.69 |
3657 | 3892 | 3.933332 | GAGTCACTTATTTTGGGACGGAG | 59.067 | 47.826 | 0.00 | 0.00 | 33.84 | 4.63 |
3658 | 3893 | 3.007635 | GTCACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3659 | 3894 | 2.026636 | TCACTTATTTTGGGACGGAGGG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3660 | 3895 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3661 | 3896 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3662 | 3897 | 1.961133 | TATTTTGGGACGGAGGGAGT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3663 | 3898 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3805 | 4044 | 9.301897 | AGTTTTTATCCTACAGCTTCATTTCTT | 57.698 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
4042 | 4285 | 1.327303 | GATGGTCAACCTGGCAAACA | 58.673 | 50.000 | 0.10 | 0.00 | 36.82 | 2.83 |
4185 | 4431 | 7.915930 | TCAATGGGTGGTTGATATTTTTCATT | 58.084 | 30.769 | 0.00 | 0.00 | 31.07 | 2.57 |
4198 | 4444 | 3.488778 | TTTTCATTTGCTGCCAATGGT | 57.511 | 38.095 | 21.74 | 0.00 | 0.00 | 3.55 |
4459 | 4706 | 5.409520 | GCAGTGTTCTGTGATCAGTTCATTA | 59.590 | 40.000 | 0.00 | 0.00 | 43.05 | 1.90 |
4492 | 4739 | 6.375455 | CCTAACTCTTTTGGCTACAACATGAT | 59.625 | 38.462 | 0.00 | 0.00 | 36.06 | 2.45 |
4498 | 4745 | 1.339535 | TGGCTACAACATGATTGGCGA | 60.340 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
4520 | 4767 | 1.547675 | CCAGTAATGTTGGTGTGGGCT | 60.548 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
4555 | 4802 | 6.183360 | TGTGTCACAGTTTCTCATTCTTGTTC | 60.183 | 38.462 | 0.18 | 0.00 | 0.00 | 3.18 |
4556 | 4803 | 6.037610 | GTGTCACAGTTTCTCATTCTTGTTCT | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
4557 | 4804 | 6.258727 | TGTCACAGTTTCTCATTCTTGTTCTC | 59.741 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
4558 | 4805 | 6.481644 | GTCACAGTTTCTCATTCTTGTTCTCT | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 3.10 |
4559 | 4806 | 7.011857 | GTCACAGTTTCTCATTCTTGTTCTCTT | 59.988 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
4560 | 4807 | 7.225538 | TCACAGTTTCTCATTCTTGTTCTCTTC | 59.774 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
4561 | 4808 | 6.484977 | ACAGTTTCTCATTCTTGTTCTCTTCC | 59.515 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
4562 | 4809 | 6.709846 | CAGTTTCTCATTCTTGTTCTCTTCCT | 59.290 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
4563 | 4810 | 7.875041 | CAGTTTCTCATTCTTGTTCTCTTCCTA | 59.125 | 37.037 | 0.00 | 0.00 | 0.00 | 2.94 |
4564 | 4811 | 8.093927 | AGTTTCTCATTCTTGTTCTCTTCCTAG | 58.906 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
4565 | 4812 | 6.537453 | TCTCATTCTTGTTCTCTTCCTAGG | 57.463 | 41.667 | 0.82 | 0.82 | 0.00 | 3.02 |
4566 | 4813 | 6.256819 | TCTCATTCTTGTTCTCTTCCTAGGA | 58.743 | 40.000 | 7.62 | 7.62 | 0.00 | 2.94 |
4567 | 4814 | 6.900186 | TCTCATTCTTGTTCTCTTCCTAGGAT | 59.100 | 38.462 | 13.57 | 0.00 | 0.00 | 3.24 |
4568 | 4815 | 7.401493 | TCTCATTCTTGTTCTCTTCCTAGGATT | 59.599 | 37.037 | 13.57 | 0.00 | 0.00 | 3.01 |
4569 | 4816 | 7.334090 | TCATTCTTGTTCTCTTCCTAGGATTG | 58.666 | 38.462 | 13.57 | 9.09 | 0.00 | 2.67 |
4570 | 4817 | 5.683876 | TCTTGTTCTCTTCCTAGGATTGG | 57.316 | 43.478 | 13.57 | 6.45 | 0.00 | 3.16 |
4571 | 4818 | 5.094387 | TCTTGTTCTCTTCCTAGGATTGGT | 58.906 | 41.667 | 13.57 | 0.00 | 0.00 | 3.67 |
4572 | 4819 | 6.261435 | TCTTGTTCTCTTCCTAGGATTGGTA | 58.739 | 40.000 | 13.57 | 0.00 | 0.00 | 3.25 |
4573 | 4820 | 5.934402 | TGTTCTCTTCCTAGGATTGGTAC | 57.066 | 43.478 | 13.57 | 9.30 | 0.00 | 3.34 |
4574 | 4821 | 5.338632 | TGTTCTCTTCCTAGGATTGGTACA | 58.661 | 41.667 | 13.57 | 11.75 | 0.00 | 2.90 |
4590 | 4837 | 3.096489 | GTACAACCGTACAAGTGACCA | 57.904 | 47.619 | 0.00 | 0.00 | 46.18 | 4.02 |
4591 | 4838 | 1.944032 | ACAACCGTACAAGTGACCAC | 58.056 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4592 | 4839 | 1.223187 | CAACCGTACAAGTGACCACC | 58.777 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4593 | 4840 | 0.249573 | AACCGTACAAGTGACCACCG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4594 | 4841 | 1.108727 | ACCGTACAAGTGACCACCGA | 61.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4595 | 4842 | 0.032403 | CCGTACAAGTGACCACCGAA | 59.968 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4596 | 4843 | 1.538634 | CCGTACAAGTGACCACCGAAA | 60.539 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
4597 | 4844 | 1.523934 | CGTACAAGTGACCACCGAAAC | 59.476 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
4598 | 4845 | 2.800629 | CGTACAAGTGACCACCGAAACT | 60.801 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4599 | 4846 | 1.663695 | ACAAGTGACCACCGAAACTG | 58.336 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4600 | 4847 | 1.208535 | ACAAGTGACCACCGAAACTGA | 59.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
4601 | 4848 | 2.285083 | CAAGTGACCACCGAAACTGAA | 58.715 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
4602 | 4849 | 2.878406 | CAAGTGACCACCGAAACTGAAT | 59.122 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
4603 | 4850 | 3.208747 | AGTGACCACCGAAACTGAATT | 57.791 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
4604 | 4851 | 3.551846 | AGTGACCACCGAAACTGAATTT | 58.448 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
4605 | 4852 | 4.710324 | AGTGACCACCGAAACTGAATTTA | 58.290 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
4606 | 4853 | 4.755123 | AGTGACCACCGAAACTGAATTTAG | 59.245 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
4607 | 4854 | 3.500680 | TGACCACCGAAACTGAATTTAGC | 59.499 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
4608 | 4855 | 2.817844 | ACCACCGAAACTGAATTTAGCC | 59.182 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
4609 | 4856 | 3.081804 | CCACCGAAACTGAATTTAGCCT | 58.918 | 45.455 | 0.00 | 0.00 | 0.00 | 4.58 |
4610 | 4857 | 3.506067 | CCACCGAAACTGAATTTAGCCTT | 59.494 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
4611 | 4858 | 4.379499 | CCACCGAAACTGAATTTAGCCTTC | 60.379 | 45.833 | 0.00 | 0.61 | 0.00 | 3.46 |
4612 | 4859 | 4.215399 | CACCGAAACTGAATTTAGCCTTCA | 59.785 | 41.667 | 11.09 | 0.00 | 0.00 | 3.02 |
4626 | 4933 | 3.771216 | AGCCTTCAGACCATGTTTCATT | 58.229 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
4630 | 4937 | 5.183904 | GCCTTCAGACCATGTTTCATTTACT | 59.816 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4663 | 4970 | 6.007076 | TGGCATTATGTTGTTGTCTTCCTTA | 58.993 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4669 | 4976 | 6.824305 | ATGTTGTTGTCTTCCTTAGAATGG | 57.176 | 37.500 | 0.00 | 0.00 | 33.81 | 3.16 |
4695 | 5002 | 3.646611 | TGTTCATGACTTGGCATGTTG | 57.353 | 42.857 | 15.17 | 3.43 | 44.59 | 3.33 |
4700 | 5007 | 6.432472 | TGTTCATGACTTGGCATGTTGTATTA | 59.568 | 34.615 | 15.17 | 0.00 | 44.59 | 0.98 |
4701 | 5008 | 7.122501 | TGTTCATGACTTGGCATGTTGTATTAT | 59.877 | 33.333 | 15.17 | 0.00 | 44.59 | 1.28 |
4709 | 5016 | 9.627123 | ACTTGGCATGTTGTATTATACTAATGT | 57.373 | 29.630 | 3.92 | 0.00 | 0.00 | 2.71 |
4838 | 5145 | 3.932710 | GACATTCTTCGCTGGTGATTACA | 59.067 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
4851 | 5158 | 6.806739 | GCTGGTGATTACACTTAACATTTTCC | 59.193 | 38.462 | 0.00 | 0.00 | 45.32 | 3.13 |
5022 | 5370 | 7.867909 | TGCTACTACAACATCTAAGCATGATAC | 59.132 | 37.037 | 0.00 | 0.00 | 33.84 | 2.24 |
5079 | 5428 | 9.856488 | GAACATAGAAACTCTAGACACATTGTA | 57.144 | 33.333 | 0.00 | 0.00 | 31.67 | 2.41 |
5141 | 5490 | 5.014808 | AGCCCTGTGAAATTTATCATTGC | 57.985 | 39.130 | 0.00 | 0.32 | 0.00 | 3.56 |
5195 | 5544 | 2.609459 | GACTGTGACTGAACACACCTTG | 59.391 | 50.000 | 0.00 | 0.00 | 44.29 | 3.61 |
5231 | 5580 | 4.794246 | CCGATTCGAGAAGTAGAAACTGAC | 59.206 | 45.833 | 7.83 | 0.00 | 35.62 | 3.51 |
5450 | 5799 | 9.456147 | AAATGTAAATTGCCTGTACACACTATA | 57.544 | 29.630 | 0.00 | 0.00 | 30.90 | 1.31 |
5518 | 5867 | 8.244113 | GGTGATAAAACCTTATATGCTTATGCC | 58.756 | 37.037 | 2.46 | 0.00 | 37.24 | 4.40 |
5584 | 5933 | 3.959293 | ACAGATCTTGGACATCATTGCA | 58.041 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
5589 | 5938 | 7.040617 | ACAGATCTTGGACATCATTGCATTATC | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
5658 | 6008 | 9.793259 | TTAGAGTTTGAAATCTCCATGTACTTT | 57.207 | 29.630 | 0.00 | 0.00 | 34.80 | 2.66 |
5682 | 6032 | 1.068588 | GACGGCCACTGCTATATGACA | 59.931 | 52.381 | 2.24 | 0.00 | 37.74 | 3.58 |
5684 | 6034 | 2.071540 | CGGCCACTGCTATATGACATG | 58.928 | 52.381 | 2.24 | 0.00 | 37.74 | 3.21 |
5686 | 6036 | 3.480470 | GGCCACTGCTATATGACATGTT | 58.520 | 45.455 | 0.00 | 0.00 | 37.74 | 2.71 |
5688 | 6038 | 5.063204 | GGCCACTGCTATATGACATGTTAA | 58.937 | 41.667 | 0.00 | 0.00 | 37.74 | 2.01 |
5689 | 6039 | 5.707298 | GGCCACTGCTATATGACATGTTAAT | 59.293 | 40.000 | 0.00 | 0.00 | 37.74 | 1.40 |
5690 | 6040 | 6.128172 | GGCCACTGCTATATGACATGTTAATC | 60.128 | 42.308 | 0.00 | 0.00 | 37.74 | 1.75 |
5714 | 6065 | 7.741785 | TCTTTCTGTGTTGGGAATAACTCTAA | 58.258 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
5721 | 6072 | 6.884836 | GTGTTGGGAATAACTCTAATTCACCT | 59.115 | 38.462 | 0.00 | 0.00 | 36.16 | 4.00 |
5745 | 6096 | 6.523840 | TCTGTTTTTCCATCCAAAATCCAAG | 58.476 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
5763 | 6114 | 3.006752 | CCAAGAGGACCATAGCATCTCTC | 59.993 | 52.174 | 0.00 | 0.00 | 36.89 | 3.20 |
5779 | 6130 | 2.979678 | TCTCTCCACTTTGGCTAAGGTT | 59.020 | 45.455 | 13.10 | 0.00 | 37.47 | 3.50 |
5794 | 6145 | 4.651962 | GCTAAGGTTAACCCTCTCTGAGAT | 59.348 | 45.833 | 21.30 | 0.00 | 45.47 | 2.75 |
5800 | 6151 | 5.834204 | GGTTAACCCTCTCTGAGATTAGCTA | 59.166 | 44.000 | 14.16 | 0.00 | 0.00 | 3.32 |
5802 | 6153 | 3.839778 | ACCCTCTCTGAGATTAGCTACC | 58.160 | 50.000 | 8.00 | 0.00 | 0.00 | 3.18 |
5815 | 6166 | 1.958288 | AGCTACCCACACAGATCCTT | 58.042 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5817 | 6168 | 1.555075 | GCTACCCACACAGATCCTTGA | 59.445 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
5825 | 6176 | 4.564199 | CCACACAGATCCTTGATTCAGTCA | 60.564 | 45.833 | 0.00 | 0.00 | 34.25 | 3.41 |
5862 | 6213 | 4.929808 | GCTTCCTTAGATTTGAAGTCGTCA | 59.070 | 41.667 | 0.00 | 0.00 | 38.18 | 4.35 |
5878 | 6229 | 0.681175 | GTCAACCCAGCATTGCCTTT | 59.319 | 50.000 | 4.70 | 0.00 | 0.00 | 3.11 |
5891 | 6242 | 1.008538 | GCCTTTGTGTTGTGCCTCG | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 4.63 |
5892 | 6243 | 1.654220 | CCTTTGTGTTGTGCCTCGG | 59.346 | 57.895 | 0.00 | 0.00 | 0.00 | 4.63 |
5893 | 6244 | 1.008538 | CTTTGTGTTGTGCCTCGGC | 60.009 | 57.895 | 0.00 | 0.00 | 42.35 | 5.54 |
5945 | 6296 | 1.910580 | CGTCATTGGGCTAGGGGTGT | 61.911 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
5956 | 6307 | 1.286553 | CTAGGGGTGTGAGAGGAGAGT | 59.713 | 57.143 | 0.00 | 0.00 | 0.00 | 3.24 |
5959 | 6310 | 0.605589 | GGGTGTGAGAGGAGAGTGTG | 59.394 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
5964 | 6315 | 3.993081 | GTGTGAGAGGAGAGTGTGAATTG | 59.007 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
5970 | 6321 | 1.676014 | GGAGAGTGTGAATTGGTCCGG | 60.676 | 57.143 | 0.00 | 0.00 | 0.00 | 5.14 |
6002 | 6353 | 1.134848 | GCCTTGTTGTTTGGCTTGTCA | 60.135 | 47.619 | 0.00 | 0.00 | 43.05 | 3.58 |
6021 | 6372 | 1.252904 | ATTGTGTGGGATGTGGCAGC | 61.253 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
6043 | 6394 | 1.480869 | GGGCCGAGTAAGGGATCTAGT | 60.481 | 57.143 | 0.00 | 0.00 | 0.00 | 2.57 |
6056 | 6407 | 4.043435 | AGGGATCTAGTCAAGCAAAAAGGT | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
6076 | 6427 | 6.910259 | AGGTCCAAGATTACCTTATTCCTT | 57.090 | 37.500 | 0.00 | 0.00 | 43.77 | 3.36 |
6079 | 6430 | 6.424032 | GTCCAAGATTACCTTATTCCTTGGT | 58.576 | 40.000 | 15.78 | 0.00 | 40.45 | 3.67 |
6100 | 6451 | 4.517075 | GGTTTGGAGAAGAACTGAAGAAGG | 59.483 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
6121 | 6472 | 2.430694 | GGAAACCAATTAGGCCATGGAC | 59.569 | 50.000 | 18.40 | 14.73 | 43.14 | 4.02 |
6143 | 6494 | 4.719773 | ACTAAGATTGTAGGTGTGGCCATA | 59.280 | 41.667 | 9.72 | 1.91 | 40.61 | 2.74 |
6144 | 6495 | 4.796110 | AAGATTGTAGGTGTGGCCATAT | 57.204 | 40.909 | 9.72 | 0.00 | 40.61 | 1.78 |
6145 | 6496 | 5.904984 | AAGATTGTAGGTGTGGCCATATA | 57.095 | 39.130 | 9.72 | 0.00 | 40.61 | 0.86 |
6146 | 6497 | 5.489792 | AGATTGTAGGTGTGGCCATATAG | 57.510 | 43.478 | 9.72 | 0.00 | 40.61 | 1.31 |
6147 | 6498 | 4.907875 | AGATTGTAGGTGTGGCCATATAGT | 59.092 | 41.667 | 9.72 | 0.00 | 40.61 | 2.12 |
6148 | 6499 | 4.415881 | TTGTAGGTGTGGCCATATAGTG | 57.584 | 45.455 | 9.72 | 0.00 | 40.61 | 2.74 |
6312 | 6664 | 2.202756 | GGTCTACTTGCGGCCGAG | 60.203 | 66.667 | 33.48 | 21.61 | 0.00 | 4.63 |
6341 | 6819 | 2.676748 | CCAGAGGACTCTTCAGCCTAT | 58.323 | 52.381 | 0.00 | 0.00 | 37.98 | 2.57 |
6513 | 7012 | 8.942338 | TTTATGCGTTCAGTCATATAGTTTCT | 57.058 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
6665 | 7165 | 7.147567 | CCCCTATTGCTTTGGTGGTATTATTTT | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
6681 | 7181 | 8.811378 | GGTATTATTTTCGTAGTTACACCTCAC | 58.189 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
6683 | 7183 | 4.669206 | TTTTCGTAGTTACACCTCACCA | 57.331 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
6735 | 7236 | 5.763204 | ACACATGACATATTCGGGTAATTCC | 59.237 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6756 | 7257 | 6.945636 | TCCTAAGTACCTTCCATCTTTTCA | 57.054 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
6758 | 7259 | 7.338710 | TCCTAAGTACCTTCCATCTTTTCATG | 58.661 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
6822 | 7323 | 5.976458 | AGAGAAGAGAGAACATCATGGTTC | 58.024 | 41.667 | 6.71 | 6.71 | 45.87 | 3.62 |
6839 | 7340 | 3.146847 | GGTTCAAACCACAGGTTCTAGG | 58.853 | 50.000 | 7.05 | 0.00 | 46.20 | 3.02 |
7105 | 7607 | 7.824779 | ACCTTGATAGAGTTTACATTGGAAGAC | 59.175 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
7488 | 7991 | 3.394606 | TCCTCCTATCTTAACCATTGCCC | 59.605 | 47.826 | 0.00 | 0.00 | 0.00 | 5.36 |
7506 | 8009 | 3.105283 | GCCCCTCTCCTCTTTGTAGTTA | 58.895 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
7507 | 8010 | 3.518303 | GCCCCTCTCCTCTTTGTAGTTAA | 59.482 | 47.826 | 0.00 | 0.00 | 0.00 | 2.01 |
7776 | 8286 | 3.457234 | CTGTCATTCACGCTGCCTAATA | 58.543 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
7784 | 8294 | 3.123804 | CACGCTGCCTAATAATCGTCTT | 58.876 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
7815 | 8325 | 1.255882 | TGGGTTATGTTGCCTTGCAG | 58.744 | 50.000 | 0.00 | 0.00 | 40.61 | 4.41 |
8012 | 8530 | 0.795085 | CTCTGAGCTGAACCAAAGCG | 59.205 | 55.000 | 0.00 | 0.00 | 45.59 | 4.68 |
8035 | 8553 | 3.583806 | CTGAAGACAGGTTCAGTAGCAG | 58.416 | 50.000 | 5.60 | 0.00 | 45.73 | 4.24 |
8083 | 8601 | 3.557595 | GTGAGCAACTCCATTTATCTCCG | 59.442 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
8084 | 8602 | 3.134458 | GAGCAACTCCATTTATCTCCGG | 58.866 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
8095 | 8613 | 5.468072 | CCATTTATCTCCGGAGAAATGTGAG | 59.532 | 44.000 | 35.28 | 25.11 | 41.36 | 3.51 |
8101 | 8619 | 1.676014 | CCGGAGAAATGTGAGACACCC | 60.676 | 57.143 | 0.00 | 0.00 | 32.73 | 4.61 |
8182 | 8701 | 2.411904 | GAGTGGAGTCAGCAGAAACAG | 58.588 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
92 | 95 | 2.169769 | TCCTCAACGGACAAAGAAGTGT | 59.830 | 45.455 | 0.00 | 0.00 | 36.69 | 3.55 |
311 | 375 | 4.854924 | TGCCATCACCATCGCCGG | 62.855 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
317 | 381 | 0.179037 | CCACGATCTGCCATCACCAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
453 | 529 | 7.724506 | CCCTGTCACCTGTACTATATAAAGAGA | 59.275 | 40.741 | 0.00 | 0.00 | 0.00 | 3.10 |
554 | 637 | 1.270358 | GCCGGGAGTGTTAGGATGATC | 60.270 | 57.143 | 2.18 | 0.00 | 0.00 | 2.92 |
555 | 638 | 0.759346 | GCCGGGAGTGTTAGGATGAT | 59.241 | 55.000 | 2.18 | 0.00 | 0.00 | 2.45 |
556 | 639 | 0.325296 | AGCCGGGAGTGTTAGGATGA | 60.325 | 55.000 | 2.18 | 0.00 | 0.00 | 2.92 |
557 | 640 | 0.541863 | AAGCCGGGAGTGTTAGGATG | 59.458 | 55.000 | 2.18 | 0.00 | 0.00 | 3.51 |
558 | 641 | 0.541863 | CAAGCCGGGAGTGTTAGGAT | 59.458 | 55.000 | 2.18 | 0.00 | 0.00 | 3.24 |
559 | 642 | 1.550130 | CCAAGCCGGGAGTGTTAGGA | 61.550 | 60.000 | 2.18 | 0.00 | 0.00 | 2.94 |
560 | 643 | 1.078426 | CCAAGCCGGGAGTGTTAGG | 60.078 | 63.158 | 2.18 | 0.00 | 0.00 | 2.69 |
561 | 644 | 1.745489 | GCCAAGCCGGGAGTGTTAG | 60.745 | 63.158 | 2.18 | 0.00 | 34.06 | 2.34 |
562 | 645 | 2.349755 | GCCAAGCCGGGAGTGTTA | 59.650 | 61.111 | 2.18 | 0.00 | 34.06 | 2.41 |
563 | 646 | 4.660938 | GGCCAAGCCGGGAGTGTT | 62.661 | 66.667 | 2.18 | 0.00 | 39.62 | 3.32 |
573 | 656 | 2.472695 | TATGATACGATGGGCCAAGC | 57.527 | 50.000 | 11.89 | 4.77 | 0.00 | 4.01 |
574 | 657 | 3.498397 | GTGTTATGATACGATGGGCCAAG | 59.502 | 47.826 | 11.89 | 10.93 | 0.00 | 3.61 |
575 | 658 | 3.135712 | AGTGTTATGATACGATGGGCCAA | 59.864 | 43.478 | 11.89 | 0.00 | 0.00 | 4.52 |
576 | 659 | 2.703536 | AGTGTTATGATACGATGGGCCA | 59.296 | 45.455 | 9.61 | 9.61 | 0.00 | 5.36 |
577 | 660 | 3.067106 | CAGTGTTATGATACGATGGGCC | 58.933 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
578 | 661 | 3.990092 | TCAGTGTTATGATACGATGGGC | 58.010 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
579 | 662 | 6.367149 | CAGATTCAGTGTTATGATACGATGGG | 59.633 | 42.308 | 0.00 | 0.00 | 0.00 | 4.00 |
580 | 663 | 6.128715 | GCAGATTCAGTGTTATGATACGATGG | 60.129 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
581 | 664 | 6.399354 | CGCAGATTCAGTGTTATGATACGATG | 60.399 | 42.308 | 0.00 | 0.00 | 0.00 | 3.84 |
582 | 665 | 5.631096 | CGCAGATTCAGTGTTATGATACGAT | 59.369 | 40.000 | 0.00 | 0.00 | 0.00 | 3.73 |
583 | 666 | 4.976116 | CGCAGATTCAGTGTTATGATACGA | 59.024 | 41.667 | 0.00 | 0.00 | 0.00 | 3.43 |
584 | 667 | 4.740205 | ACGCAGATTCAGTGTTATGATACG | 59.260 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
585 | 668 | 5.557136 | GCACGCAGATTCAGTGTTATGATAC | 60.557 | 44.000 | 8.15 | 0.00 | 38.10 | 2.24 |
586 | 669 | 4.507756 | GCACGCAGATTCAGTGTTATGATA | 59.492 | 41.667 | 8.15 | 0.00 | 38.10 | 2.15 |
587 | 670 | 3.310774 | GCACGCAGATTCAGTGTTATGAT | 59.689 | 43.478 | 8.15 | 0.00 | 38.10 | 2.45 |
588 | 671 | 2.672874 | GCACGCAGATTCAGTGTTATGA | 59.327 | 45.455 | 8.15 | 0.00 | 38.10 | 2.15 |
589 | 672 | 2.223112 | GGCACGCAGATTCAGTGTTATG | 60.223 | 50.000 | 8.15 | 0.00 | 38.10 | 1.90 |
590 | 673 | 2.009774 | GGCACGCAGATTCAGTGTTAT | 58.990 | 47.619 | 8.15 | 0.00 | 38.10 | 1.89 |
591 | 674 | 1.438651 | GGCACGCAGATTCAGTGTTA | 58.561 | 50.000 | 8.15 | 0.00 | 38.10 | 2.41 |
592 | 675 | 1.237285 | GGGCACGCAGATTCAGTGTT | 61.237 | 55.000 | 8.15 | 0.00 | 38.10 | 3.32 |
593 | 676 | 1.672356 | GGGCACGCAGATTCAGTGT | 60.672 | 57.895 | 8.15 | 0.15 | 38.10 | 3.55 |
594 | 677 | 2.401766 | GGGGCACGCAGATTCAGTG | 61.402 | 63.158 | 0.00 | 3.56 | 42.57 | 3.66 |
595 | 678 | 2.045926 | GGGGCACGCAGATTCAGT | 60.046 | 61.111 | 0.00 | 0.00 | 42.57 | 3.41 |
613 | 696 | 2.819284 | GCCGGGGATGAGGGGTAAG | 61.819 | 68.421 | 2.18 | 0.00 | 0.00 | 2.34 |
614 | 697 | 2.770904 | GCCGGGGATGAGGGGTAA | 60.771 | 66.667 | 2.18 | 0.00 | 0.00 | 2.85 |
796 | 886 | 0.736636 | GGGGAAATTTTAGGACGGCG | 59.263 | 55.000 | 4.80 | 4.80 | 0.00 | 6.46 |
1061 | 1170 | 1.303236 | TGTTGAATGGCGGGAGGTG | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
1115 | 1228 | 7.690256 | ACTTGAGTTCCTGGTGTATTAATTCT | 58.310 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
1139 | 1253 | 6.700081 | GGGTTAAACTGGAAGAATTGTGAAAC | 59.300 | 38.462 | 0.00 | 0.00 | 37.43 | 2.78 |
1164 | 1282 | 2.419021 | CCCATGCTGCAAAATACAAGGG | 60.419 | 50.000 | 6.36 | 4.58 | 34.97 | 3.95 |
1237 | 1355 | 7.734924 | ACAATAGCAATCCATATGTGTGTAG | 57.265 | 36.000 | 1.24 | 0.00 | 0.00 | 2.74 |
1255 | 1375 | 8.547967 | ACACATACACCAAAGACTTACAATAG | 57.452 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
1257 | 1377 | 7.817418 | AACACATACACCAAAGACTTACAAT | 57.183 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1264 | 1384 | 5.971202 | CAGTCAAAACACATACACCAAAGAC | 59.029 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1269 | 1389 | 3.629855 | CACCAGTCAAAACACATACACCA | 59.370 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
1277 | 1397 | 4.506288 | GGCAATTAACACCAGTCAAAACAC | 59.494 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
1285 | 1405 | 2.525368 | GGGAAGGCAATTAACACCAGT | 58.475 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
1307 | 1427 | 3.084039 | TCTGCAGTTAATGGAAAGGCAG | 58.916 | 45.455 | 14.67 | 0.00 | 43.14 | 4.85 |
1310 | 1430 | 6.678900 | GCATAAGTCTGCAGTTAATGGAAAGG | 60.679 | 42.308 | 14.67 | 0.00 | 41.87 | 3.11 |
1342 | 1462 | 3.064820 | TCTCAAGTTTTGTTGCGTCTTCC | 59.935 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
1372 | 1492 | 3.518590 | AGAAAGGTTATTACGCCGTGAG | 58.481 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1373 | 1493 | 3.194116 | AGAGAAAGGTTATTACGCCGTGA | 59.806 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
1422 | 1542 | 4.944317 | GGGGTAAAAGATTCCTTGAGAGTG | 59.056 | 45.833 | 0.00 | 0.00 | 31.91 | 3.51 |
1435 | 1555 | 3.658705 | ACATGTGGGTAAGGGGTAAAAGA | 59.341 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1439 | 1559 | 4.141665 | CGATAACATGTGGGTAAGGGGTAA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
1469 | 1590 | 4.033709 | AGATAGTAGGGCAAGAAGCTTCA | 58.966 | 43.478 | 27.57 | 2.61 | 44.79 | 3.02 |
1475 | 1596 | 4.627015 | TGGGTAAGATAGTAGGGCAAGAA | 58.373 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1512 | 1633 | 7.754069 | TTGAGAACATTTAACACTGCAAAAG | 57.246 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1748 | 1875 | 4.996758 | GGAACCATAAGTTTGCAAGCAATT | 59.003 | 37.500 | 16.04 | 4.65 | 39.40 | 2.32 |
1789 | 1916 | 3.109619 | CGTAAAAGAGCAACCGCAAAAA | 58.890 | 40.909 | 0.00 | 0.00 | 42.27 | 1.94 |
1790 | 1917 | 2.355132 | TCGTAAAAGAGCAACCGCAAAA | 59.645 | 40.909 | 0.00 | 0.00 | 42.27 | 2.44 |
1791 | 1918 | 1.941294 | TCGTAAAAGAGCAACCGCAAA | 59.059 | 42.857 | 0.00 | 0.00 | 42.27 | 3.68 |
1792 | 1919 | 1.584175 | TCGTAAAAGAGCAACCGCAA | 58.416 | 45.000 | 0.00 | 0.00 | 42.27 | 4.85 |
1793 | 1920 | 1.803334 | ATCGTAAAAGAGCAACCGCA | 58.197 | 45.000 | 0.00 | 0.00 | 42.27 | 5.69 |
1794 | 1921 | 2.928116 | AGTATCGTAAAAGAGCAACCGC | 59.072 | 45.455 | 0.00 | 0.00 | 38.99 | 5.68 |
1795 | 1922 | 6.636666 | TTAAGTATCGTAAAAGAGCAACCG | 57.363 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
1796 | 1923 | 8.193250 | TGATTAAGTATCGTAAAAGAGCAACC | 57.807 | 34.615 | 0.00 | 0.00 | 35.94 | 3.77 |
1797 | 1924 | 9.084164 | TCTGATTAAGTATCGTAAAAGAGCAAC | 57.916 | 33.333 | 0.00 | 0.00 | 35.94 | 4.17 |
1798 | 1925 | 9.302345 | CTCTGATTAAGTATCGTAAAAGAGCAA | 57.698 | 33.333 | 0.00 | 0.00 | 35.94 | 3.91 |
1799 | 1926 | 7.435488 | GCTCTGATTAAGTATCGTAAAAGAGCA | 59.565 | 37.037 | 22.11 | 0.00 | 43.05 | 4.26 |
1800 | 1927 | 7.435488 | TGCTCTGATTAAGTATCGTAAAAGAGC | 59.565 | 37.037 | 21.26 | 21.26 | 43.39 | 4.09 |
1801 | 1928 | 8.858003 | TGCTCTGATTAAGTATCGTAAAAGAG | 57.142 | 34.615 | 0.00 | 0.00 | 35.94 | 2.85 |
1802 | 1929 | 9.817809 | AATGCTCTGATTAAGTATCGTAAAAGA | 57.182 | 29.630 | 0.00 | 0.00 | 35.94 | 2.52 |
1806 | 1933 | 9.193133 | GCTTAATGCTCTGATTAAGTATCGTAA | 57.807 | 33.333 | 13.02 | 0.00 | 43.49 | 3.18 |
1807 | 1934 | 7.813148 | GGCTTAATGCTCTGATTAAGTATCGTA | 59.187 | 37.037 | 13.02 | 0.00 | 43.49 | 3.43 |
1808 | 1935 | 6.647067 | GGCTTAATGCTCTGATTAAGTATCGT | 59.353 | 38.462 | 13.02 | 0.00 | 43.49 | 3.73 |
1809 | 1936 | 6.870965 | AGGCTTAATGCTCTGATTAAGTATCG | 59.129 | 38.462 | 13.02 | 0.00 | 43.49 | 2.92 |
1810 | 1937 | 8.093927 | AGAGGCTTAATGCTCTGATTAAGTATC | 58.906 | 37.037 | 13.02 | 11.34 | 43.49 | 2.24 |
1811 | 1938 | 7.972301 | AGAGGCTTAATGCTCTGATTAAGTAT | 58.028 | 34.615 | 13.02 | 5.26 | 43.49 | 2.12 |
1812 | 1939 | 7.069950 | TGAGAGGCTTAATGCTCTGATTAAGTA | 59.930 | 37.037 | 13.02 | 0.00 | 43.49 | 2.24 |
1813 | 1940 | 6.126940 | TGAGAGGCTTAATGCTCTGATTAAGT | 60.127 | 38.462 | 13.02 | 0.00 | 43.49 | 2.24 |
1814 | 1941 | 6.202570 | GTGAGAGGCTTAATGCTCTGATTAAG | 59.797 | 42.308 | 9.00 | 9.00 | 44.03 | 1.85 |
1815 | 1942 | 6.051717 | GTGAGAGGCTTAATGCTCTGATTAA | 58.948 | 40.000 | 0.00 | 0.00 | 42.39 | 1.40 |
1816 | 1943 | 5.453903 | GGTGAGAGGCTTAATGCTCTGATTA | 60.454 | 44.000 | 0.00 | 0.00 | 42.39 | 1.75 |
1817 | 1944 | 4.450053 | GTGAGAGGCTTAATGCTCTGATT | 58.550 | 43.478 | 0.00 | 0.00 | 42.39 | 2.57 |
1863 | 1990 | 3.402628 | AAGCTACACAAGGATGACGTT | 57.597 | 42.857 | 0.00 | 0.00 | 0.00 | 3.99 |
1910 | 2038 | 4.342092 | ACAGAAAGGACCAAGGAAATTGTG | 59.658 | 41.667 | 0.00 | 0.00 | 37.17 | 3.33 |
1930 | 2058 | 4.392754 | GGGAGCATAAAATTTTGCCAACAG | 59.607 | 41.667 | 13.76 | 0.00 | 39.72 | 3.16 |
1931 | 2059 | 4.202398 | TGGGAGCATAAAATTTTGCCAACA | 60.202 | 37.500 | 13.76 | 6.33 | 39.72 | 3.33 |
1973 | 2101 | 6.983307 | ACAGTAAGGATCATTCAGAGAATTCG | 59.017 | 38.462 | 0.00 | 0.00 | 0.00 | 3.34 |
2074 | 2204 | 7.042389 | CGAATTTAGATAAACTTGAGCTCCTCC | 60.042 | 40.741 | 12.15 | 0.00 | 0.00 | 4.30 |
2149 | 2283 | 7.209475 | TGAAACATAATCTCATCAGTATCGCA | 58.791 | 34.615 | 0.00 | 0.00 | 0.00 | 5.10 |
2773 | 2907 | 7.210174 | TCTGCATATAACAGTATGAGACAACC | 58.790 | 38.462 | 6.15 | 0.00 | 39.69 | 3.77 |
2970 | 3106 | 8.317891 | TGCTGACAATCGTATTTTTCTAGAAA | 57.682 | 30.769 | 13.99 | 13.99 | 0.00 | 2.52 |
3134 | 3270 | 7.070074 | TGGGTTAACAAGTTACCAATTTGATGT | 59.930 | 33.333 | 8.10 | 0.00 | 32.98 | 3.06 |
3145 | 3281 | 6.094464 | AGACTTTGTGTGGGTTAACAAGTTAC | 59.906 | 38.462 | 8.10 | 0.66 | 37.57 | 2.50 |
3264 | 3400 | 9.220767 | GCTATGCATTTAGTAAATAGCTAAGGT | 57.779 | 33.333 | 20.68 | 10.84 | 41.50 | 3.50 |
3305 | 3441 | 8.721478 | GCAATTTCAGAGAATCAAAGTACTACA | 58.279 | 33.333 | 0.00 | 0.00 | 37.82 | 2.74 |
3580 | 3815 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3581 | 3816 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3582 | 3817 | 2.026636 | TCACTTATTTTGGGACGGAGGG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3583 | 3818 | 3.007635 | GTCACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3584 | 3819 | 3.933332 | GAGTCACTTATTTTGGGACGGAG | 59.067 | 47.826 | 0.00 | 0.00 | 33.84 | 4.63 |
3585 | 3820 | 3.325425 | TGAGTCACTTATTTTGGGACGGA | 59.675 | 43.478 | 0.00 | 0.00 | 33.84 | 4.69 |
3586 | 3821 | 3.670625 | TGAGTCACTTATTTTGGGACGG | 58.329 | 45.455 | 0.00 | 0.00 | 33.84 | 4.79 |
3587 | 3822 | 4.755123 | AGTTGAGTCACTTATTTTGGGACG | 59.245 | 41.667 | 0.00 | 0.00 | 33.84 | 4.79 |
3588 | 3823 | 6.635030 | AAGTTGAGTCACTTATTTTGGGAC | 57.365 | 37.500 | 0.00 | 0.00 | 35.10 | 4.46 |
3589 | 3824 | 6.605594 | ACAAAGTTGAGTCACTTATTTTGGGA | 59.394 | 34.615 | 12.94 | 0.00 | 35.87 | 4.37 |
3590 | 3825 | 6.805713 | ACAAAGTTGAGTCACTTATTTTGGG | 58.194 | 36.000 | 12.94 | 0.00 | 35.87 | 4.12 |
3591 | 3826 | 8.621286 | AGTACAAAGTTGAGTCACTTATTTTGG | 58.379 | 33.333 | 12.94 | 0.78 | 35.87 | 3.28 |
3596 | 3831 | 8.989980 | GCTTTAGTACAAAGTTGAGTCACTTAT | 58.010 | 33.333 | 14.90 | 0.00 | 35.87 | 1.73 |
3597 | 3832 | 8.202137 | AGCTTTAGTACAAAGTTGAGTCACTTA | 58.798 | 33.333 | 14.90 | 0.00 | 35.87 | 2.24 |
3598 | 3833 | 7.048512 | AGCTTTAGTACAAAGTTGAGTCACTT | 58.951 | 34.615 | 14.90 | 0.00 | 38.74 | 3.16 |
3599 | 3834 | 6.583562 | AGCTTTAGTACAAAGTTGAGTCACT | 58.416 | 36.000 | 14.90 | 0.00 | 0.00 | 3.41 |
3600 | 3835 | 6.846325 | AGCTTTAGTACAAAGTTGAGTCAC | 57.154 | 37.500 | 14.90 | 0.00 | 0.00 | 3.67 |
3601 | 3836 | 7.723324 | ACTAGCTTTAGTACAAAGTTGAGTCA | 58.277 | 34.615 | 14.90 | 0.00 | 0.00 | 3.41 |
3615 | 3850 | 8.989980 | GTGACTCAAATTTGTACTAGCTTTAGT | 58.010 | 33.333 | 17.47 | 9.38 | 0.00 | 2.24 |
3616 | 3851 | 9.209175 | AGTGACTCAAATTTGTACTAGCTTTAG | 57.791 | 33.333 | 17.47 | 6.39 | 0.00 | 1.85 |
3617 | 3852 | 9.555727 | AAGTGACTCAAATTTGTACTAGCTTTA | 57.444 | 29.630 | 17.47 | 0.00 | 0.00 | 1.85 |
3618 | 3853 | 8.451908 | AAGTGACTCAAATTTGTACTAGCTTT | 57.548 | 30.769 | 17.47 | 2.80 | 0.00 | 3.51 |
3619 | 3854 | 9.726438 | ATAAGTGACTCAAATTTGTACTAGCTT | 57.274 | 29.630 | 17.47 | 15.95 | 0.00 | 3.74 |
3620 | 3855 | 9.726438 | AATAAGTGACTCAAATTTGTACTAGCT | 57.274 | 29.630 | 17.47 | 7.79 | 0.00 | 3.32 |
3624 | 3859 | 9.965824 | CCAAAATAAGTGACTCAAATTTGTACT | 57.034 | 29.630 | 17.47 | 13.89 | 0.00 | 2.73 |
3625 | 3860 | 9.191995 | CCCAAAATAAGTGACTCAAATTTGTAC | 57.808 | 33.333 | 17.47 | 12.15 | 0.00 | 2.90 |
3626 | 3861 | 9.137459 | TCCCAAAATAAGTGACTCAAATTTGTA | 57.863 | 29.630 | 17.47 | 4.40 | 0.00 | 2.41 |
3627 | 3862 | 7.926018 | GTCCCAAAATAAGTGACTCAAATTTGT | 59.074 | 33.333 | 17.47 | 0.00 | 0.00 | 2.83 |
3628 | 3863 | 7.114811 | CGTCCCAAAATAAGTGACTCAAATTTG | 59.885 | 37.037 | 12.15 | 12.15 | 0.00 | 2.32 |
3629 | 3864 | 7.145323 | CGTCCCAAAATAAGTGACTCAAATTT | 58.855 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
3630 | 3865 | 6.294508 | CCGTCCCAAAATAAGTGACTCAAATT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
3631 | 3866 | 5.183140 | CCGTCCCAAAATAAGTGACTCAAAT | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3632 | 3867 | 4.517453 | CCGTCCCAAAATAAGTGACTCAAA | 59.483 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
3633 | 3868 | 4.069304 | CCGTCCCAAAATAAGTGACTCAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3634 | 3869 | 3.325425 | TCCGTCCCAAAATAAGTGACTCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3635 | 3870 | 3.933332 | CTCCGTCCCAAAATAAGTGACTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3636 | 3871 | 3.307480 | CCTCCGTCCCAAAATAAGTGACT | 60.307 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3637 | 3872 | 3.007635 | CCTCCGTCCCAAAATAAGTGAC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3638 | 3873 | 2.026636 | CCCTCCGTCCCAAAATAAGTGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3639 | 3874 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3640 | 3875 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3641 | 3876 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3642 | 3877 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
3643 | 3878 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3644 | 3879 | 1.961133 | TACTCCCTCCGTCCCAAAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3645 | 3880 | 1.835531 | GATACTCCCTCCGTCCCAAAA | 59.164 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
3646 | 3881 | 1.007963 | AGATACTCCCTCCGTCCCAAA | 59.992 | 52.381 | 0.00 | 0.00 | 0.00 | 3.28 |
3647 | 3882 | 0.635009 | AGATACTCCCTCCGTCCCAA | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
3648 | 3883 | 0.635009 | AAGATACTCCCTCCGTCCCA | 59.365 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
3649 | 3884 | 1.041437 | CAAGATACTCCCTCCGTCCC | 58.959 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3650 | 3885 | 1.777941 | ACAAGATACTCCCTCCGTCC | 58.222 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3651 | 3886 | 5.302313 | AGAAATACAAGATACTCCCTCCGTC | 59.698 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3652 | 3887 | 5.209659 | AGAAATACAAGATACTCCCTCCGT | 58.790 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
3653 | 3888 | 5.793030 | AGAAATACAAGATACTCCCTCCG | 57.207 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
3654 | 3889 | 6.099845 | TCCAAGAAATACAAGATACTCCCTCC | 59.900 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
3655 | 3890 | 7.125792 | TCCAAGAAATACAAGATACTCCCTC | 57.874 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3656 | 3891 | 7.182930 | ACTTCCAAGAAATACAAGATACTCCCT | 59.817 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
3657 | 3892 | 7.339482 | ACTTCCAAGAAATACAAGATACTCCC | 58.661 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
3805 | 4044 | 9.255304 | CTACAAAAATGCAAAAGCCTAAGTTTA | 57.745 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
4042 | 4285 | 7.449395 | TGATTGAAATTGAGAGTCTGTTGGAAT | 59.551 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
4185 | 4431 | 0.829333 | ACACAAACCATTGGCAGCAA | 59.171 | 45.000 | 1.54 | 0.00 | 41.01 | 3.91 |
4370 | 4616 | 0.401541 | ATAGCCTCAACCCTACCCCC | 60.402 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
4371 | 4617 | 1.420514 | GAATAGCCTCAACCCTACCCC | 59.579 | 57.143 | 0.00 | 0.00 | 0.00 | 4.95 |
4372 | 4618 | 1.420514 | GGAATAGCCTCAACCCTACCC | 59.579 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
4373 | 4619 | 2.409570 | AGGAATAGCCTCAACCCTACC | 58.590 | 52.381 | 0.00 | 0.00 | 46.97 | 3.18 |
4374 | 4620 | 5.625568 | TTTAGGAATAGCCTCAACCCTAC | 57.374 | 43.478 | 0.00 | 0.00 | 46.97 | 3.18 |
4375 | 4621 | 5.073144 | CCATTTAGGAATAGCCTCAACCCTA | 59.927 | 44.000 | 0.00 | 0.00 | 46.97 | 3.53 |
4393 | 4639 | 8.171400 | TCCCAGGTTCAATTAACTAACCATTTA | 58.829 | 33.333 | 14.55 | 0.26 | 44.21 | 1.40 |
4411 | 4657 | 2.062636 | ACACCAACTACATCCCAGGTT | 58.937 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
4492 | 4739 | 2.750135 | ACCAACATTACTGGTTCGCCAA | 60.750 | 45.455 | 0.00 | 0.00 | 45.13 | 4.52 |
4498 | 4745 | 2.593026 | CCCACACCAACATTACTGGTT | 58.407 | 47.619 | 0.00 | 0.00 | 45.13 | 3.67 |
4503 | 4750 | 0.887933 | CCAGCCCACACCAACATTAC | 59.112 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4506 | 4753 | 2.118076 | CCCAGCCCACACCAACAT | 59.882 | 61.111 | 0.00 | 0.00 | 0.00 | 2.71 |
4520 | 4767 | 2.191908 | GTGACACAGTGCACCCCA | 59.808 | 61.111 | 14.63 | 1.59 | 0.00 | 4.96 |
4539 | 4786 | 7.333174 | CCTAGGAAGAGAACAAGAATGAGAAAC | 59.667 | 40.741 | 1.05 | 0.00 | 0.00 | 2.78 |
4555 | 4802 | 4.441634 | CGGTTGTACCAATCCTAGGAAGAG | 60.442 | 50.000 | 17.30 | 9.59 | 38.47 | 2.85 |
4556 | 4803 | 3.449737 | CGGTTGTACCAATCCTAGGAAGA | 59.550 | 47.826 | 17.30 | 0.00 | 38.47 | 2.87 |
4557 | 4804 | 3.197116 | ACGGTTGTACCAATCCTAGGAAG | 59.803 | 47.826 | 17.30 | 11.53 | 38.47 | 3.46 |
4558 | 4805 | 3.175594 | ACGGTTGTACCAATCCTAGGAA | 58.824 | 45.455 | 17.30 | 0.00 | 38.47 | 3.36 |
4559 | 4806 | 2.823959 | ACGGTTGTACCAATCCTAGGA | 58.176 | 47.619 | 15.46 | 15.46 | 38.47 | 2.94 |
4560 | 4807 | 4.050852 | GTACGGTTGTACCAATCCTAGG | 57.949 | 50.000 | 0.82 | 0.82 | 44.25 | 3.02 |
4571 | 4818 | 2.224018 | GGTGGTCACTTGTACGGTTGTA | 60.224 | 50.000 | 0.93 | 0.00 | 0.00 | 2.41 |
4572 | 4819 | 1.473788 | GGTGGTCACTTGTACGGTTGT | 60.474 | 52.381 | 0.93 | 0.00 | 0.00 | 3.32 |
4573 | 4820 | 1.223187 | GGTGGTCACTTGTACGGTTG | 58.777 | 55.000 | 0.93 | 0.00 | 0.00 | 3.77 |
4574 | 4821 | 0.249573 | CGGTGGTCACTTGTACGGTT | 60.250 | 55.000 | 0.93 | 0.00 | 0.00 | 4.44 |
4575 | 4822 | 1.108727 | TCGGTGGTCACTTGTACGGT | 61.109 | 55.000 | 0.93 | 0.00 | 0.00 | 4.83 |
4576 | 4823 | 0.032403 | TTCGGTGGTCACTTGTACGG | 59.968 | 55.000 | 0.93 | 0.00 | 0.00 | 4.02 |
4577 | 4824 | 1.523934 | GTTTCGGTGGTCACTTGTACG | 59.476 | 52.381 | 0.93 | 0.00 | 0.00 | 3.67 |
4578 | 4825 | 2.542595 | CAGTTTCGGTGGTCACTTGTAC | 59.457 | 50.000 | 0.93 | 0.00 | 0.00 | 2.90 |
4579 | 4826 | 2.431419 | TCAGTTTCGGTGGTCACTTGTA | 59.569 | 45.455 | 0.93 | 0.00 | 0.00 | 2.41 |
4580 | 4827 | 1.208535 | TCAGTTTCGGTGGTCACTTGT | 59.791 | 47.619 | 0.93 | 0.00 | 0.00 | 3.16 |
4581 | 4828 | 1.948104 | TCAGTTTCGGTGGTCACTTG | 58.052 | 50.000 | 0.93 | 0.00 | 0.00 | 3.16 |
4582 | 4829 | 2.702592 | TTCAGTTTCGGTGGTCACTT | 57.297 | 45.000 | 0.93 | 0.00 | 0.00 | 3.16 |
4583 | 4830 | 2.930826 | ATTCAGTTTCGGTGGTCACT | 57.069 | 45.000 | 0.93 | 0.00 | 0.00 | 3.41 |
4584 | 4831 | 3.982576 | AAATTCAGTTTCGGTGGTCAC | 57.017 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
4585 | 4832 | 3.500680 | GCTAAATTCAGTTTCGGTGGTCA | 59.499 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
4586 | 4833 | 3.119955 | GGCTAAATTCAGTTTCGGTGGTC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
4587 | 4834 | 2.817844 | GGCTAAATTCAGTTTCGGTGGT | 59.182 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
4588 | 4835 | 3.081804 | AGGCTAAATTCAGTTTCGGTGG | 58.918 | 45.455 | 0.00 | 0.00 | 0.00 | 4.61 |
4589 | 4836 | 4.215399 | TGAAGGCTAAATTCAGTTTCGGTG | 59.785 | 41.667 | 0.00 | 0.00 | 32.96 | 4.94 |
4590 | 4837 | 4.394729 | TGAAGGCTAAATTCAGTTTCGGT | 58.605 | 39.130 | 0.00 | 0.00 | 32.96 | 4.69 |
4591 | 4838 | 4.974591 | CTGAAGGCTAAATTCAGTTTCGG | 58.025 | 43.478 | 5.88 | 0.00 | 45.58 | 4.30 |
4598 | 4845 | 4.922206 | ACATGGTCTGAAGGCTAAATTCA | 58.078 | 39.130 | 0.00 | 0.00 | 35.45 | 2.57 |
4599 | 4846 | 5.904362 | AACATGGTCTGAAGGCTAAATTC | 57.096 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
4600 | 4847 | 5.774690 | TGAAACATGGTCTGAAGGCTAAATT | 59.225 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4601 | 4848 | 5.324409 | TGAAACATGGTCTGAAGGCTAAAT | 58.676 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
4602 | 4849 | 4.724399 | TGAAACATGGTCTGAAGGCTAAA | 58.276 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
4603 | 4850 | 4.365514 | TGAAACATGGTCTGAAGGCTAA | 57.634 | 40.909 | 0.00 | 0.00 | 0.00 | 3.09 |
4604 | 4851 | 4.574674 | ATGAAACATGGTCTGAAGGCTA | 57.425 | 40.909 | 0.00 | 0.00 | 0.00 | 3.93 |
4605 | 4852 | 2.957402 | TGAAACATGGTCTGAAGGCT | 57.043 | 45.000 | 0.00 | 0.00 | 0.00 | 4.58 |
4606 | 4853 | 4.525912 | AAATGAAACATGGTCTGAAGGC | 57.474 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
4607 | 4854 | 6.824305 | AGTAAATGAAACATGGTCTGAAGG | 57.176 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
4608 | 4855 | 8.137437 | ACAAAGTAAATGAAACATGGTCTGAAG | 58.863 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
4609 | 4856 | 8.006298 | ACAAAGTAAATGAAACATGGTCTGAA | 57.994 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
4610 | 4857 | 7.581213 | ACAAAGTAAATGAAACATGGTCTGA | 57.419 | 32.000 | 0.00 | 0.00 | 0.00 | 3.27 |
4611 | 4858 | 9.180678 | GTTACAAAGTAAATGAAACATGGTCTG | 57.819 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
4612 | 4859 | 8.908903 | TGTTACAAAGTAAATGAAACATGGTCT | 58.091 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
4613 | 4860 | 9.691362 | ATGTTACAAAGTAAATGAAACATGGTC | 57.309 | 29.630 | 0.00 | 0.00 | 35.42 | 4.02 |
4614 | 4861 | 9.474920 | CATGTTACAAAGTAAATGAAACATGGT | 57.525 | 29.630 | 14.42 | 0.00 | 44.32 | 3.55 |
4626 | 4933 | 8.580720 | ACAACATAATGCCATGTTACAAAGTAA | 58.419 | 29.630 | 7.78 | 0.00 | 45.18 | 2.24 |
4630 | 4937 | 7.212976 | ACAACAACATAATGCCATGTTACAAA | 58.787 | 30.769 | 7.78 | 0.00 | 45.18 | 2.83 |
4663 | 4970 | 7.417116 | GCCAAGTCATGAACATAATTCCATTCT | 60.417 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
4669 | 4976 | 6.567050 | ACATGCCAAGTCATGAACATAATTC | 58.433 | 36.000 | 10.31 | 0.00 | 44.94 | 2.17 |
4876 | 5188 | 5.221501 | ACAAAGCTTTGCATGGTACAATTCT | 60.222 | 36.000 | 33.72 | 10.69 | 41.75 | 2.40 |
5076 | 5425 | 5.356470 | TGCATGTTATTTAGTGCAGCATACA | 59.644 | 36.000 | 0.00 | 0.00 | 42.13 | 2.29 |
5079 | 5428 | 4.158209 | TGTGCATGTTATTTAGTGCAGCAT | 59.842 | 37.500 | 0.00 | 0.00 | 46.93 | 3.79 |
5141 | 5490 | 3.365364 | GGAATGACTTGCTCTCCAAAACG | 60.365 | 47.826 | 0.00 | 0.00 | 31.94 | 3.60 |
5195 | 5544 | 1.202076 | CGAATCGGCAGAAAGAAAGGC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
5231 | 5580 | 0.249120 | TGGCGTTAGATGACAGGTGG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
5306 | 5655 | 4.348863 | AAGGAGCCATGTAAGCAGATAG | 57.651 | 45.455 | 0.00 | 0.00 | 0.00 | 2.08 |
5312 | 5661 | 3.092301 | AGGAAAAAGGAGCCATGTAAGC | 58.908 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
5471 | 5820 | 5.754406 | CACCTGATTTCTTGCATTTCACAAA | 59.246 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5518 | 5867 | 9.376075 | CATCATAACTACAGGCCTATAATTCAG | 57.624 | 37.037 | 3.98 | 0.00 | 0.00 | 3.02 |
5530 | 5879 | 6.132791 | ACACGAGTACATCATAACTACAGG | 57.867 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
5640 | 5990 | 7.333423 | CCGTCTTTAAAGTACATGGAGATTTCA | 59.667 | 37.037 | 14.74 | 0.00 | 0.00 | 2.69 |
5646 | 5996 | 3.621715 | GGCCGTCTTTAAAGTACATGGAG | 59.378 | 47.826 | 14.74 | 0.64 | 0.00 | 3.86 |
5658 | 6008 | 3.639561 | TCATATAGCAGTGGCCGTCTTTA | 59.360 | 43.478 | 0.00 | 0.00 | 42.56 | 1.85 |
5682 | 6032 | 7.781324 | ATTCCCAACACAGAAAGATTAACAT | 57.219 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5684 | 6034 | 8.793592 | AGTTATTCCCAACACAGAAAGATTAAC | 58.206 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
5686 | 6036 | 8.383175 | AGAGTTATTCCCAACACAGAAAGATTA | 58.617 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
5688 | 6038 | 6.784031 | AGAGTTATTCCCAACACAGAAAGAT | 58.216 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5689 | 6039 | 6.187727 | AGAGTTATTCCCAACACAGAAAGA | 57.812 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
5690 | 6040 | 7.979444 | TTAGAGTTATTCCCAACACAGAAAG | 57.021 | 36.000 | 0.00 | 0.00 | 0.00 | 2.62 |
5714 | 6065 | 4.739793 | TGGATGGAAAAACAGAGGTGAAT | 58.260 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
5721 | 6072 | 6.326064 | TCTTGGATTTTGGATGGAAAAACAGA | 59.674 | 34.615 | 0.00 | 0.00 | 29.78 | 3.41 |
5729 | 6080 | 3.309121 | GGTCCTCTTGGATTTTGGATGGA | 60.309 | 47.826 | 0.00 | 0.00 | 45.29 | 3.41 |
5745 | 6096 | 2.298729 | GTGGAGAGATGCTATGGTCCTC | 59.701 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
5754 | 6105 | 0.990374 | AGCCAAAGTGGAGAGATGCT | 59.010 | 50.000 | 0.00 | 0.00 | 40.96 | 3.79 |
5763 | 6114 | 2.823747 | GGGTTAACCTTAGCCAAAGTGG | 59.176 | 50.000 | 23.69 | 0.00 | 35.92 | 4.00 |
5779 | 6130 | 5.386924 | GGTAGCTAATCTCAGAGAGGGTTA | 58.613 | 45.833 | 6.24 | 0.00 | 0.00 | 2.85 |
5794 | 6145 | 3.116096 | AGGATCTGTGTGGGTAGCTAA | 57.884 | 47.619 | 0.00 | 0.00 | 0.00 | 3.09 |
5800 | 6151 | 2.644299 | TGAATCAAGGATCTGTGTGGGT | 59.356 | 45.455 | 0.00 | 0.00 | 0.00 | 4.51 |
5802 | 6153 | 3.937706 | GACTGAATCAAGGATCTGTGTGG | 59.062 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
5815 | 6166 | 3.277715 | TGTGTTGCAAGTGACTGAATCA | 58.722 | 40.909 | 0.00 | 0.00 | 33.79 | 2.57 |
5817 | 6168 | 4.613944 | CATTGTGTTGCAAGTGACTGAAT | 58.386 | 39.130 | 0.00 | 0.00 | 40.86 | 2.57 |
5825 | 6176 | 2.034124 | AGGAAGCATTGTGTTGCAAGT | 58.966 | 42.857 | 0.00 | 0.00 | 45.23 | 3.16 |
5862 | 6213 | 0.393820 | CACAAAGGCAATGCTGGGTT | 59.606 | 50.000 | 4.82 | 0.00 | 0.00 | 4.11 |
5915 | 6266 | 4.060667 | AATGACGGGGCCCCCTTG | 62.061 | 66.667 | 36.13 | 23.85 | 42.67 | 3.61 |
5926 | 6277 | 1.153168 | CACCCCTAGCCCAATGACG | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
5931 | 6282 | 0.909610 | CTCTCACACCCCTAGCCCAA | 60.910 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
5945 | 6296 | 3.242867 | ACCAATTCACACTCTCCTCTCA | 58.757 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
5956 | 6307 | 2.158559 | CATCAACCGGACCAATTCACA | 58.841 | 47.619 | 9.46 | 0.00 | 0.00 | 3.58 |
5959 | 6310 | 2.420022 | CACTCATCAACCGGACCAATTC | 59.580 | 50.000 | 9.46 | 0.00 | 0.00 | 2.17 |
5964 | 6315 | 0.741221 | GCTCACTCATCAACCGGACC | 60.741 | 60.000 | 9.46 | 0.00 | 0.00 | 4.46 |
5970 | 6321 | 2.880890 | ACAACAAGGCTCACTCATCAAC | 59.119 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
6002 | 6353 | 1.252904 | GCTGCCACATCCCACACAAT | 61.253 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
6021 | 6372 | 0.760945 | AGATCCCTTACTCGGCCCAG | 60.761 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6043 | 6394 | 5.010617 | GGTAATCTTGGACCTTTTTGCTTGA | 59.989 | 40.000 | 0.00 | 0.00 | 32.58 | 3.02 |
6076 | 6427 | 4.771114 | TCTTCAGTTCTTCTCCAAACCA | 57.229 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
6079 | 6430 | 4.412199 | TCCCTTCTTCAGTTCTTCTCCAAA | 59.588 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
6100 | 6451 | 2.430694 | GTCCATGGCCTAATTGGTTTCC | 59.569 | 50.000 | 6.96 | 0.00 | 38.35 | 3.13 |
6108 | 6459 | 5.653255 | ACAATCTTAGTCCATGGCCTAAT | 57.347 | 39.130 | 15.33 | 0.00 | 0.00 | 1.73 |
6109 | 6460 | 5.071788 | CCTACAATCTTAGTCCATGGCCTAA | 59.928 | 44.000 | 14.31 | 14.31 | 0.00 | 2.69 |
6110 | 6461 | 4.593206 | CCTACAATCTTAGTCCATGGCCTA | 59.407 | 45.833 | 6.96 | 1.49 | 0.00 | 3.93 |
6111 | 6462 | 3.392616 | CCTACAATCTTAGTCCATGGCCT | 59.607 | 47.826 | 6.96 | 2.81 | 0.00 | 5.19 |
6112 | 6463 | 3.136626 | ACCTACAATCTTAGTCCATGGCC | 59.863 | 47.826 | 6.96 | 0.00 | 0.00 | 5.36 |
6113 | 6464 | 4.130118 | CACCTACAATCTTAGTCCATGGC | 58.870 | 47.826 | 6.96 | 2.00 | 0.00 | 4.40 |
6114 | 6465 | 5.118990 | CACACCTACAATCTTAGTCCATGG | 58.881 | 45.833 | 4.97 | 4.97 | 0.00 | 3.66 |
6115 | 6466 | 5.118990 | CCACACCTACAATCTTAGTCCATG | 58.881 | 45.833 | 0.00 | 0.00 | 0.00 | 3.66 |
6116 | 6467 | 4.384208 | GCCACACCTACAATCTTAGTCCAT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
6121 | 6472 | 3.627395 | TGGCCACACCTACAATCTTAG | 57.373 | 47.619 | 0.00 | 0.00 | 40.22 | 2.18 |
6125 | 6476 | 4.997395 | CACTATATGGCCACACCTACAATC | 59.003 | 45.833 | 8.16 | 0.00 | 40.22 | 2.67 |
6436 | 6935 | 1.271325 | TGGCCGAAGATGAGCTTTTCA | 60.271 | 47.619 | 0.00 | 0.00 | 40.85 | 2.69 |
6623 | 7123 | 0.035343 | GGGGAGGTTAGTTGGACTGC | 60.035 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6665 | 7165 | 2.029649 | GCTTGGTGAGGTGTAACTACGA | 60.030 | 50.000 | 0.00 | 0.00 | 36.74 | 3.43 |
6756 | 7257 | 3.066291 | TGTATGCCCGAAACACTTCAT | 57.934 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
6758 | 7259 | 2.812011 | AGTTGTATGCCCGAAACACTTC | 59.188 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
6822 | 7323 | 3.485463 | TCACCTAGAACCTGTGGTTTG | 57.515 | 47.619 | 3.34 | 0.00 | 46.95 | 2.93 |
6839 | 7340 | 8.564574 | TCAAAGTTCATTGTTACAGGTTATCAC | 58.435 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
6950 | 7451 | 0.996727 | GTGATCAACGCAAACGGCAC | 60.997 | 55.000 | 0.00 | 0.00 | 46.04 | 5.01 |
6951 | 7452 | 1.281353 | GTGATCAACGCAAACGGCA | 59.719 | 52.632 | 0.00 | 0.00 | 46.04 | 5.69 |
6952 | 7453 | 0.725784 | CTGTGATCAACGCAAACGGC | 60.726 | 55.000 | 0.00 | 0.00 | 46.04 | 5.68 |
6953 | 7454 | 0.586319 | ACTGTGATCAACGCAAACGG | 59.414 | 50.000 | 0.00 | 0.00 | 46.04 | 4.44 |
7488 | 7991 | 6.710744 | TGCTTTTTAACTACAAAGAGGAGAGG | 59.289 | 38.462 | 2.26 | 0.00 | 32.56 | 3.69 |
7506 | 8009 | 4.580167 | TCAGCACAGAGTTGTATGCTTTTT | 59.420 | 37.500 | 0.00 | 0.00 | 35.17 | 1.94 |
7507 | 8010 | 4.136796 | TCAGCACAGAGTTGTATGCTTTT | 58.863 | 39.130 | 0.00 | 0.00 | 35.17 | 2.27 |
7776 | 8286 | 4.220602 | CCCAAATTTTCAGGGAAGACGATT | 59.779 | 41.667 | 6.25 | 0.00 | 45.80 | 3.34 |
7784 | 8294 | 5.512232 | GCAACATAACCCAAATTTTCAGGGA | 60.512 | 40.000 | 16.89 | 0.00 | 45.80 | 4.20 |
7887 | 8400 | 3.165071 | TGGATATATTGGCGCTCTGAGA | 58.835 | 45.455 | 7.64 | 0.00 | 0.00 | 3.27 |
7995 | 8513 | 1.871772 | CCGCTTTGGTTCAGCTCAG | 59.128 | 57.895 | 0.00 | 0.00 | 34.88 | 3.35 |
8035 | 8553 | 1.203994 | TGCTCGCCAGGTTCTTAGTAC | 59.796 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
8083 | 8601 | 1.002087 | ACGGGTGTCTCACATTTCTCC | 59.998 | 52.381 | 2.41 | 0.00 | 35.86 | 3.71 |
8084 | 8602 | 2.069273 | CACGGGTGTCTCACATTTCTC | 58.931 | 52.381 | 2.41 | 0.00 | 35.86 | 2.87 |
8095 | 8613 | 1.207089 | TGATCTCCATTCACGGGTGTC | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
8101 | 8619 | 5.636965 | GGATTACAGATGATCTCCATTCACG | 59.363 | 44.000 | 0.00 | 0.00 | 35.17 | 4.35 |
8182 | 8701 | 3.426568 | GGCAGCTGCGACCAGAAC | 61.427 | 66.667 | 31.19 | 11.96 | 41.77 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.