Multiple sequence alignment - TraesCS6D01G011000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G011000 chr6D 100.000 5248 0 0 1 5248 4284397 4279150 0.000000e+00 9692.0
1 TraesCS6D01G011000 chr6D 88.690 2794 208 33 2040 4753 4637947 4640712 0.000000e+00 3310.0
2 TraesCS6D01G011000 chr6D 81.590 1396 231 15 1959 3332 4055758 4054367 0.000000e+00 1131.0
3 TraesCS6D01G011000 chr6D 85.952 840 111 2 2095 2927 4642556 4643395 0.000000e+00 891.0
4 TraesCS6D01G011000 chr6D 80.911 922 146 18 2465 3363 4266920 4266006 0.000000e+00 701.0
5 TraesCS6D01G011000 chr6D 89.296 355 33 4 4855 5206 4640942 4641294 1.730000e-119 440.0
6 TraesCS6D01G011000 chr6D 85.638 188 27 0 3389 3576 4054279 4054092 1.150000e-46 198.0
7 TraesCS6D01G011000 chr6D 92.000 50 3 1 4073 4122 4021111 4021063 9.430000e-08 69.4
8 TraesCS6D01G011000 chr6B 91.054 3141 202 35 1528 4598 8417393 8420524 0.000000e+00 4170.0
9 TraesCS6D01G011000 chr6B 85.912 1086 153 0 1968 3053 8451848 8452933 0.000000e+00 1158.0
10 TraesCS6D01G011000 chr6B 86.869 594 42 15 4670 5242 8420532 8421110 2.670000e-177 632.0
11 TraesCS6D01G011000 chr6B 81.514 687 52 28 4420 5076 714200400 714201041 3.650000e-136 496.0
12 TraesCS6D01G011000 chr6B 84.656 189 24 5 3484 3671 7822656 7822472 3.230000e-42 183.0
13 TraesCS6D01G011000 chr6B 80.508 118 15 7 768 877 8422352 8422469 3.370000e-12 84.2
14 TraesCS6D01G011000 chr6B 92.000 50 3 1 4073 4122 8594454 8594502 9.430000e-08 69.4
15 TraesCS6D01G011000 chr6A 92.880 2458 96 24 1238 3641 2731599 2729167 0.000000e+00 3496.0
16 TraesCS6D01G011000 chr6A 84.355 1419 198 14 1959 3366 2972241 2973646 0.000000e+00 1369.0
17 TraesCS6D01G011000 chr6A 81.514 1704 262 33 1962 3625 2699564 2697874 0.000000e+00 1352.0
18 TraesCS6D01G011000 chr6A 79.152 2005 319 54 1970 3908 3014910 3016881 0.000000e+00 1295.0
19 TraesCS6D01G011000 chr6A 85.152 1118 156 4 1961 3078 2684786 2683679 0.000000e+00 1136.0
20 TraesCS6D01G011000 chr6A 85.536 1044 150 1 1959 3002 2725200 2724158 0.000000e+00 1090.0
21 TraesCS6D01G011000 chr6A 90.327 734 51 8 4065 4781 2727940 2727210 0.000000e+00 944.0
22 TraesCS6D01G011000 chr6A 87.577 652 60 12 4084 4719 2974522 2975168 0.000000e+00 736.0
23 TraesCS6D01G011000 chr6A 94.131 443 20 5 3628 4064 2728525 2728083 0.000000e+00 669.0
24 TraesCS6D01G011000 chr6A 91.277 470 15 8 4721 5173 2975253 2975713 7.470000e-173 617.0
25 TraesCS6D01G011000 chr6A 85.714 567 81 0 1997 2563 2994916 2995482 2.700000e-167 599.0
26 TraesCS6D01G011000 chr6A 82.697 445 31 17 4658 5072 45631200 45631628 2.320000e-93 353.0
27 TraesCS6D01G011000 chr6A 88.194 144 12 3 1 140 2732900 2732758 3.250000e-37 167.0
28 TraesCS6D01G011000 chr6A 95.699 93 4 0 4860 4952 2726972 2726880 3.270000e-32 150.0
29 TraesCS6D01G011000 chr6A 75.897 390 39 33 689 1068 2732015 2731671 1.180000e-31 148.0
30 TraesCS6D01G011000 chr6A 91.489 47 3 1 1585 1631 2721502 2721457 4.390000e-06 63.9
31 TraesCS6D01G011000 chr7B 81.951 687 52 28 4420 5076 513667825 513668469 2.800000e-142 516.0
32 TraesCS6D01G011000 chr4A 81.698 683 52 27 4420 5072 569159844 569159205 7.850000e-138 501.0
33 TraesCS6D01G011000 chr3A 81.341 686 58 24 4420 5076 268816646 268817290 1.310000e-135 494.0
34 TraesCS6D01G011000 chr3A 83.073 449 30 14 4658 5076 69739516 69739948 2.990000e-97 366.0
35 TraesCS6D01G011000 chr3A 89.189 74 8 0 3278 3351 731404096 731404169 5.600000e-15 93.5
36 TraesCS6D01G011000 chr3A 89.189 74 8 0 3278 3351 731447654 731447727 5.600000e-15 93.5
37 TraesCS6D01G011000 chr2A 81.368 687 55 31 4420 5076 61874044 61874687 4.720000e-135 492.0
38 TraesCS6D01G011000 chr1A 80.932 687 59 28 4420 5076 6699542 6700186 1.320000e-130 477.0
39 TraesCS6D01G011000 chr1A 82.167 443 33 13 4658 5070 582915888 582915462 6.510000e-89 339.0
40 TraesCS6D01G011000 chr1A 82.167 443 33 13 4658 5070 582981161 582980735 6.510000e-89 339.0
41 TraesCS6D01G011000 chr5A 82.030 601 52 22 4420 4991 691285360 691284787 1.330000e-125 460.0
42 TraesCS6D01G011000 chr7A 81.017 590 40 24 4517 5076 733866217 733865670 2.280000e-108 403.0
43 TraesCS6D01G011000 chr1B 80.964 394 30 13 4712 5076 392640518 392640141 2.410000e-68 270.0
44 TraesCS6D01G011000 chr1B 80.203 394 33 13 4712 5076 615534296 615533919 2.430000e-63 254.0
45 TraesCS6D01G011000 chr4B 80.457 394 32 13 4712 5076 266128168 266128545 5.210000e-65 259.0
46 TraesCS6D01G011000 chr4B 80.203 394 33 13 4712 5076 6422635 6422258 2.430000e-63 254.0
47 TraesCS6D01G011000 chr4B 80.203 394 33 13 4712 5076 23182812 23183189 2.430000e-63 254.0
48 TraesCS6D01G011000 chr1D 81.319 182 23 5 1464 1637 263328229 263328407 2.550000e-28 137.0
49 TraesCS6D01G011000 chr7D 90.566 53 4 1 4326 4378 39376880 39376829 9.430000e-08 69.4
50 TraesCS6D01G011000 chrUn 93.182 44 3 0 824 867 62646024 62646067 1.220000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G011000 chr6D 4279150 4284397 5247 True 9692.000000 9692 100.000000 1 5248 1 chr6D.!!$R3 5247
1 TraesCS6D01G011000 chr6D 4637947 4643395 5448 False 1547.000000 3310 87.979333 2040 5206 3 chr6D.!!$F1 3166
2 TraesCS6D01G011000 chr6D 4266006 4266920 914 True 701.000000 701 80.911000 2465 3363 1 chr6D.!!$R2 898
3 TraesCS6D01G011000 chr6D 4054092 4055758 1666 True 664.500000 1131 83.614000 1959 3576 2 chr6D.!!$R4 1617
4 TraesCS6D01G011000 chr6B 8417393 8422469 5076 False 1628.733333 4170 86.143667 768 5242 3 chr6B.!!$F4 4474
5 TraesCS6D01G011000 chr6B 8451848 8452933 1085 False 1158.000000 1158 85.912000 1968 3053 1 chr6B.!!$F1 1085
6 TraesCS6D01G011000 chr6B 714200400 714201041 641 False 496.000000 496 81.514000 4420 5076 1 chr6B.!!$F3 656
7 TraesCS6D01G011000 chr6A 2697874 2699564 1690 True 1352.000000 1352 81.514000 1962 3625 1 chr6A.!!$R2 1663
8 TraesCS6D01G011000 chr6A 3014910 3016881 1971 False 1295.000000 1295 79.152000 1970 3908 1 chr6A.!!$F2 1938
9 TraesCS6D01G011000 chr6A 2683679 2684786 1107 True 1136.000000 1136 85.152000 1961 3078 1 chr6A.!!$R1 1117
10 TraesCS6D01G011000 chr6A 2972241 2975713 3472 False 907.333333 1369 87.736333 1959 5173 3 chr6A.!!$F4 3214
11 TraesCS6D01G011000 chr6A 2721457 2732900 11443 True 840.987500 3496 89.269125 1 4952 8 chr6A.!!$R3 4951
12 TraesCS6D01G011000 chr6A 2994916 2995482 566 False 599.000000 599 85.714000 1997 2563 1 chr6A.!!$F1 566
13 TraesCS6D01G011000 chr7B 513667825 513668469 644 False 516.000000 516 81.951000 4420 5076 1 chr7B.!!$F1 656
14 TraesCS6D01G011000 chr4A 569159205 569159844 639 True 501.000000 501 81.698000 4420 5072 1 chr4A.!!$R1 652
15 TraesCS6D01G011000 chr3A 268816646 268817290 644 False 494.000000 494 81.341000 4420 5076 1 chr3A.!!$F2 656
16 TraesCS6D01G011000 chr2A 61874044 61874687 643 False 492.000000 492 81.368000 4420 5076 1 chr2A.!!$F1 656
17 TraesCS6D01G011000 chr1A 6699542 6700186 644 False 477.000000 477 80.932000 4420 5076 1 chr1A.!!$F1 656
18 TraesCS6D01G011000 chr5A 691284787 691285360 573 True 460.000000 460 82.030000 4420 4991 1 chr5A.!!$R1 571
19 TraesCS6D01G011000 chr7A 733865670 733866217 547 True 403.000000 403 81.017000 4517 5076 1 chr7A.!!$R1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 1164 0.032815 GCGAACTATCTCAGCTCCCC 59.967 60.000 0.00 0.00 0.00 4.81 F
949 1453 0.045623 TAGCCAGATTTCCCCTCCCA 59.954 55.000 0.00 0.00 0.00 4.37 F
1126 1634 0.179225 GTGCGTATGTGAAGCGGTTG 60.179 55.000 3.70 0.00 34.91 3.77 F
1216 1724 0.253894 TGATCAGTGGCCCTGTGATG 59.746 55.000 14.55 0.00 42.19 3.07 F
1504 2026 0.311165 GTCGCCGATAGCTAAGAGCA 59.689 55.000 0.00 0.00 45.56 4.26 F
1856 2425 0.313043 ATGTCTGCTTTGTGTGCTGC 59.687 50.000 0.00 0.00 0.00 5.25 F
3385 4052 1.066573 ACGAAACCATCTGCTCAGAGG 60.067 52.381 5.76 5.22 41.33 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1531 2065 0.866483 GCTAGGCGCGTTCTCTACAC 60.866 60.000 8.36 0.00 0.00 2.90 R
1759 2319 1.366854 GAAAGAACATCGGGCGGGAC 61.367 60.000 0.00 0.00 0.00 4.46 R
3366 4007 1.649664 CCTCTGAGCAGATGGTTTCG 58.350 55.000 0.00 0.00 36.76 3.46 R
3408 4103 4.734398 ACAAGGCAAAACACTGAATGAA 57.266 36.364 0.00 0.00 0.00 2.57 R
3469 4164 8.861086 ACTAGAGTACATGGTACTATGAATTGG 58.139 37.037 24.30 10.62 0.00 3.16 R
4071 5715 3.126001 TCCCAGCACTGTTAGACAAAG 57.874 47.619 0.00 0.00 0.00 2.77 R
4418 6068 0.179127 ACATCTCAGCATCGACCACG 60.179 55.000 0.00 0.00 41.26 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.844257 TCTAGTCTTAAGTACTAGTCCAATACC 57.156 37.037 25.21 0.00 44.46 2.73
47 48 6.319911 GTCTTAAGTACTAGTCCAATACCGGT 59.680 42.308 13.98 13.98 0.00 5.28
53 54 0.252197 AGTCCAATACCGGTTCTGCC 59.748 55.000 15.04 4.04 0.00 4.85
146 151 9.534565 TGTTCATAATTTTCCGAAAACAATTCA 57.465 25.926 8.46 1.40 32.37 2.57
147 152 9.791838 GTTCATAATTTTCCGAAAACAATTCAC 57.208 29.630 8.46 0.02 32.37 3.18
148 153 9.534565 TTCATAATTTTCCGAAAACAATTCACA 57.465 25.926 8.46 0.00 32.37 3.58
149 154 9.703892 TCATAATTTTCCGAAAACAATTCACAT 57.296 25.926 8.46 0.00 32.37 3.21
150 155 9.956797 CATAATTTTCCGAAAACAATTCACATC 57.043 29.630 8.46 0.00 32.37 3.06
151 156 9.927668 ATAATTTTCCGAAAACAATTCACATCT 57.072 25.926 8.46 0.00 32.37 2.90
152 157 8.661352 AATTTTCCGAAAACAATTCACATCTT 57.339 26.923 8.46 0.00 32.37 2.40
153 158 8.661352 ATTTTCCGAAAACAATTCACATCTTT 57.339 26.923 8.46 0.00 32.37 2.52
154 159 8.485976 TTTTCCGAAAACAATTCACATCTTTT 57.514 26.923 2.01 0.00 0.00 2.27
155 160 9.587772 TTTTCCGAAAACAATTCACATCTTTTA 57.412 25.926 2.01 0.00 0.00 1.52
156 161 9.587772 TTTCCGAAAACAATTCACATCTTTTAA 57.412 25.926 0.00 0.00 0.00 1.52
157 162 9.587772 TTCCGAAAACAATTCACATCTTTTAAA 57.412 25.926 0.00 0.00 0.00 1.52
158 163 9.587772 TCCGAAAACAATTCACATCTTTTAAAA 57.412 25.926 0.00 0.00 0.00 1.52
185 190 9.757227 AATGTTCATAATTTTCCGAAAAGTTGA 57.243 25.926 11.46 11.46 33.22 3.18
186 191 8.568732 TGTTCATAATTTTCCGAAAAGTTGAC 57.431 30.769 11.46 6.79 33.22 3.18
212 217 9.112789 CGAATTCAAAAATTATTCGTCACTTCA 57.887 29.630 6.22 0.00 43.25 3.02
245 251 8.628630 AGGTTTGTGAATTTGAAAAAGGAAAA 57.371 26.923 0.00 0.00 0.00 2.29
313 320 6.605471 AAAAGAAGGAAAACCTGTTCTTGT 57.395 33.333 0.00 0.00 38.84 3.16
314 321 6.605471 AAAGAAGGAAAACCTGTTCTTGTT 57.395 33.333 0.00 0.00 38.84 2.83
315 322 6.605471 AAGAAGGAAAACCTGTTCTTGTTT 57.395 33.333 0.00 0.00 37.75 2.83
316 323 6.605471 AGAAGGAAAACCTGTTCTTGTTTT 57.395 33.333 0.00 0.00 44.82 2.43
340 811 4.373156 AAAAGTATCTGGCTGGTCTGTT 57.627 40.909 0.00 0.00 0.00 3.16
342 813 2.260822 AGTATCTGGCTGGTCTGTTGT 58.739 47.619 0.00 0.00 0.00 3.32
344 815 1.059098 ATCTGGCTGGTCTGTTGTCA 58.941 50.000 0.00 0.00 0.00 3.58
345 816 1.059098 TCTGGCTGGTCTGTTGTCAT 58.941 50.000 0.00 0.00 0.00 3.06
346 817 1.162698 CTGGCTGGTCTGTTGTCATG 58.837 55.000 0.00 0.00 0.00 3.07
348 819 1.142667 TGGCTGGTCTGTTGTCATGAA 59.857 47.619 0.00 0.00 0.00 2.57
349 820 1.537202 GGCTGGTCTGTTGTCATGAAC 59.463 52.381 0.00 0.00 0.00 3.18
350 821 2.498167 GCTGGTCTGTTGTCATGAACT 58.502 47.619 0.00 0.00 0.00 3.01
352 823 4.256920 GCTGGTCTGTTGTCATGAACTAT 58.743 43.478 0.00 0.00 0.00 2.12
353 824 4.331168 GCTGGTCTGTTGTCATGAACTATC 59.669 45.833 0.00 0.00 0.00 2.08
356 827 5.012046 TGGTCTGTTGTCATGAACTATCAGT 59.988 40.000 0.00 0.00 39.39 3.41
357 828 6.210584 TGGTCTGTTGTCATGAACTATCAGTA 59.789 38.462 0.00 0.00 39.39 2.74
358 829 7.097192 GGTCTGTTGTCATGAACTATCAGTAA 58.903 38.462 0.00 0.00 39.39 2.24
360 831 9.155975 GTCTGTTGTCATGAACTATCAGTAATT 57.844 33.333 0.00 0.00 39.39 1.40
361 832 9.371136 TCTGTTGTCATGAACTATCAGTAATTC 57.629 33.333 0.00 0.00 39.39 2.17
362 833 9.376075 CTGTTGTCATGAACTATCAGTAATTCT 57.624 33.333 0.00 0.00 39.39 2.40
363 834 9.371136 TGTTGTCATGAACTATCAGTAATTCTC 57.629 33.333 0.00 0.00 39.39 2.87
364 835 8.535592 GTTGTCATGAACTATCAGTAATTCTCG 58.464 37.037 0.00 0.00 39.39 4.04
365 836 7.772166 TGTCATGAACTATCAGTAATTCTCGT 58.228 34.615 0.00 0.00 39.39 4.18
366 837 7.702348 TGTCATGAACTATCAGTAATTCTCGTG 59.298 37.037 0.00 0.00 39.39 4.35
367 838 7.168302 GTCATGAACTATCAGTAATTCTCGTGG 59.832 40.741 0.00 0.00 39.39 4.94
368 839 5.348986 TGAACTATCAGTAATTCTCGTGGC 58.651 41.667 0.00 0.00 0.00 5.01
369 840 5.127194 TGAACTATCAGTAATTCTCGTGGCT 59.873 40.000 0.00 0.00 0.00 4.75
370 841 5.189659 ACTATCAGTAATTCTCGTGGCTC 57.810 43.478 0.00 0.00 0.00 4.70
371 842 2.561733 TCAGTAATTCTCGTGGCTCG 57.438 50.000 1.94 1.94 41.41 5.03
372 843 0.924090 CAGTAATTCTCGTGGCTCGC 59.076 55.000 3.73 0.00 39.67 5.03
373 844 0.525668 AGTAATTCTCGTGGCTCGCG 60.526 55.000 0.00 0.00 39.67 5.87
374 845 0.524816 GTAATTCTCGTGGCTCGCGA 60.525 55.000 9.26 9.26 44.12 5.87
375 846 0.384309 TAATTCTCGTGGCTCGCGAT 59.616 50.000 10.36 0.00 45.17 4.58
376 847 0.384309 AATTCTCGTGGCTCGCGATA 59.616 50.000 10.36 0.00 45.17 2.92
377 848 0.598562 ATTCTCGTGGCTCGCGATAT 59.401 50.000 10.36 5.94 45.17 1.63
378 849 0.384309 TTCTCGTGGCTCGCGATATT 59.616 50.000 10.36 0.00 45.17 1.28
379 850 0.317854 TCTCGTGGCTCGCGATATTG 60.318 55.000 10.36 0.00 45.17 1.90
380 851 0.317854 CTCGTGGCTCGCGATATTGA 60.318 55.000 10.36 3.56 45.17 2.57
381 852 0.313987 TCGTGGCTCGCGATATTGAT 59.686 50.000 10.36 0.00 41.48 2.57
382 853 0.436150 CGTGGCTCGCGATATTGATG 59.564 55.000 10.36 0.00 39.94 3.07
383 854 1.502231 GTGGCTCGCGATATTGATGT 58.498 50.000 10.36 0.00 0.00 3.06
384 855 1.457303 GTGGCTCGCGATATTGATGTC 59.543 52.381 10.36 0.00 0.00 3.06
385 856 1.341209 TGGCTCGCGATATTGATGTCT 59.659 47.619 10.36 0.00 0.00 3.41
386 857 2.224042 TGGCTCGCGATATTGATGTCTT 60.224 45.455 10.36 0.00 0.00 3.01
387 858 2.156504 GGCTCGCGATATTGATGTCTTG 59.843 50.000 10.36 0.00 0.00 3.02
388 859 2.797156 GCTCGCGATATTGATGTCTTGT 59.203 45.455 10.36 0.00 0.00 3.16
389 860 3.362401 GCTCGCGATATTGATGTCTTGTG 60.362 47.826 10.36 0.00 0.00 3.33
390 861 3.780902 TCGCGATATTGATGTCTTGTGT 58.219 40.909 3.71 0.00 0.00 3.72
391 862 4.180817 TCGCGATATTGATGTCTTGTGTT 58.819 39.130 3.71 0.00 0.00 3.32
392 863 4.629634 TCGCGATATTGATGTCTTGTGTTT 59.370 37.500 3.71 0.00 0.00 2.83
393 864 4.725280 CGCGATATTGATGTCTTGTGTTTG 59.275 41.667 0.00 0.00 0.00 2.93
394 865 5.445806 CGCGATATTGATGTCTTGTGTTTGA 60.446 40.000 0.00 0.00 0.00 2.69
395 866 6.489675 GCGATATTGATGTCTTGTGTTTGAT 58.510 36.000 0.00 0.00 0.00 2.57
396 867 6.968904 GCGATATTGATGTCTTGTGTTTGATT 59.031 34.615 0.00 0.00 0.00 2.57
397 868 7.485913 GCGATATTGATGTCTTGTGTTTGATTT 59.514 33.333 0.00 0.00 0.00 2.17
398 869 9.003112 CGATATTGATGTCTTGTGTTTGATTTC 57.997 33.333 0.00 0.00 0.00 2.17
401 872 7.990541 TTGATGTCTTGTGTTTGATTTCTTG 57.009 32.000 0.00 0.00 0.00 3.02
402 873 5.978919 TGATGTCTTGTGTTTGATTTCTTGC 59.021 36.000 0.00 0.00 0.00 4.01
403 874 4.350346 TGTCTTGTGTTTGATTTCTTGCG 58.650 39.130 0.00 0.00 0.00 4.85
404 875 4.095632 TGTCTTGTGTTTGATTTCTTGCGA 59.904 37.500 0.00 0.00 0.00 5.10
405 876 4.672413 GTCTTGTGTTTGATTTCTTGCGAG 59.328 41.667 0.00 0.00 0.00 5.03
406 877 4.335315 TCTTGTGTTTGATTTCTTGCGAGT 59.665 37.500 0.00 0.00 0.00 4.18
407 878 4.630894 TGTGTTTGATTTCTTGCGAGTT 57.369 36.364 0.00 0.00 0.00 3.01
408 879 4.992688 TGTGTTTGATTTCTTGCGAGTTT 58.007 34.783 0.00 0.00 0.00 2.66
409 880 5.406649 TGTGTTTGATTTCTTGCGAGTTTT 58.593 33.333 0.00 0.00 0.00 2.43
410 881 5.866633 TGTGTTTGATTTCTTGCGAGTTTTT 59.133 32.000 0.00 0.00 0.00 1.94
411 882 6.177822 GTGTTTGATTTCTTGCGAGTTTTTG 58.822 36.000 0.00 0.00 0.00 2.44
412 883 5.190342 GTTTGATTTCTTGCGAGTTTTTGC 58.810 37.500 0.00 0.00 0.00 3.68
413 884 3.042189 TGATTTCTTGCGAGTTTTTGCG 58.958 40.909 0.00 0.00 36.42 4.85
414 885 2.553079 TTTCTTGCGAGTTTTTGCGT 57.447 40.000 0.00 0.00 36.42 5.24
415 886 3.677190 TTTCTTGCGAGTTTTTGCGTA 57.323 38.095 0.00 0.00 36.42 4.42
416 887 3.889196 TTCTTGCGAGTTTTTGCGTAT 57.111 38.095 0.00 0.00 36.42 3.06
417 888 3.181826 TCTTGCGAGTTTTTGCGTATG 57.818 42.857 0.00 0.00 36.42 2.39
418 889 2.546368 TCTTGCGAGTTTTTGCGTATGT 59.454 40.909 0.00 0.00 36.42 2.29
419 890 3.002862 TCTTGCGAGTTTTTGCGTATGTT 59.997 39.130 0.00 0.00 36.42 2.71
420 891 3.341857 TGCGAGTTTTTGCGTATGTTT 57.658 38.095 0.00 0.00 36.42 2.83
421 892 3.039405 TGCGAGTTTTTGCGTATGTTTG 58.961 40.909 0.00 0.00 36.42 2.93
422 893 2.160156 GCGAGTTTTTGCGTATGTTTGC 60.160 45.455 0.00 0.00 0.00 3.68
423 894 2.086849 CGAGTTTTTGCGTATGTTTGCG 59.913 45.455 0.00 0.00 0.00 4.85
429 900 4.743558 CGTATGTTTGCGCCACAG 57.256 55.556 14.17 0.00 0.00 3.66
430 901 1.866237 CGTATGTTTGCGCCACAGT 59.134 52.632 14.17 6.40 0.00 3.55
431 902 1.072391 CGTATGTTTGCGCCACAGTA 58.928 50.000 14.17 5.62 0.00 2.74
432 903 1.201877 CGTATGTTTGCGCCACAGTAC 60.202 52.381 14.17 13.76 0.00 2.73
433 904 1.129811 GTATGTTTGCGCCACAGTACC 59.870 52.381 14.17 0.50 0.00 3.34
434 905 1.241315 ATGTTTGCGCCACAGTACCC 61.241 55.000 14.17 0.00 0.00 3.69
435 906 1.894756 GTTTGCGCCACAGTACCCA 60.895 57.895 4.18 0.00 0.00 4.51
436 907 1.599518 TTTGCGCCACAGTACCCAG 60.600 57.895 4.18 0.00 0.00 4.45
437 908 2.332312 TTTGCGCCACAGTACCCAGT 62.332 55.000 4.18 0.00 0.00 4.00
438 909 2.434359 GCGCCACAGTACCCAGTC 60.434 66.667 0.00 0.00 0.00 3.51
439 910 2.126071 CGCCACAGTACCCAGTCG 60.126 66.667 0.00 0.00 0.00 4.18
440 911 2.264794 GCCACAGTACCCAGTCGG 59.735 66.667 0.00 0.00 37.81 4.79
449 920 3.390521 CCCAGTCGGTGGCTGCTA 61.391 66.667 0.00 0.00 46.45 3.49
450 921 2.662596 CCAGTCGGTGGCTGCTAA 59.337 61.111 0.00 0.00 40.39 3.09
451 922 1.221840 CCAGTCGGTGGCTGCTAAT 59.778 57.895 0.00 0.00 40.39 1.73
452 923 0.464036 CCAGTCGGTGGCTGCTAATA 59.536 55.000 0.00 0.00 40.39 0.98
453 924 1.539065 CCAGTCGGTGGCTGCTAATAG 60.539 57.143 0.00 0.00 40.39 1.73
454 925 0.753262 AGTCGGTGGCTGCTAATAGG 59.247 55.000 0.00 0.00 0.00 2.57
455 926 0.750850 GTCGGTGGCTGCTAATAGGA 59.249 55.000 0.00 0.00 0.00 2.94
456 927 0.750850 TCGGTGGCTGCTAATAGGAC 59.249 55.000 0.00 0.00 0.00 3.85
457 928 0.249911 CGGTGGCTGCTAATAGGACC 60.250 60.000 0.00 0.00 0.00 4.46
458 929 1.132500 GGTGGCTGCTAATAGGACCT 58.868 55.000 0.00 0.00 0.00 3.85
459 930 1.490910 GGTGGCTGCTAATAGGACCTT 59.509 52.381 0.00 0.00 0.00 3.50
460 931 2.485657 GGTGGCTGCTAATAGGACCTTC 60.486 54.545 0.00 0.00 0.00 3.46
461 932 2.436173 GTGGCTGCTAATAGGACCTTCT 59.564 50.000 0.00 0.00 0.00 2.85
462 933 3.115390 TGGCTGCTAATAGGACCTTCTT 58.885 45.455 0.00 0.00 0.00 2.52
463 934 3.134804 TGGCTGCTAATAGGACCTTCTTC 59.865 47.826 0.00 0.00 0.00 2.87
464 935 3.495276 GGCTGCTAATAGGACCTTCTTCC 60.495 52.174 0.00 0.00 35.66 3.46
465 936 3.495276 GCTGCTAATAGGACCTTCTTCCC 60.495 52.174 0.00 0.00 36.12 3.97
466 937 3.711704 CTGCTAATAGGACCTTCTTCCCA 59.288 47.826 0.00 0.00 36.12 4.37
467 938 4.307259 TGCTAATAGGACCTTCTTCCCAT 58.693 43.478 0.00 0.00 36.12 4.00
468 939 5.473273 TGCTAATAGGACCTTCTTCCCATA 58.527 41.667 0.00 0.00 36.12 2.74
469 940 5.307196 TGCTAATAGGACCTTCTTCCCATAC 59.693 44.000 0.00 0.00 36.12 2.39
470 941 5.544562 GCTAATAGGACCTTCTTCCCATACT 59.455 44.000 0.00 0.00 36.12 2.12
471 942 6.043358 GCTAATAGGACCTTCTTCCCATACTT 59.957 42.308 0.00 0.00 36.12 2.24
472 943 6.910259 AATAGGACCTTCTTCCCATACTTT 57.090 37.500 0.00 0.00 36.12 2.66
473 944 6.910259 ATAGGACCTTCTTCCCATACTTTT 57.090 37.500 0.00 0.00 36.12 2.27
474 945 5.600669 AGGACCTTCTTCCCATACTTTTT 57.399 39.130 0.00 0.00 36.12 1.94
497 968 3.975479 TTTTTAGGAAACCTCCCCACA 57.025 42.857 0.00 0.00 43.64 4.17
498 969 2.963599 TTTAGGAAACCTCCCCACAC 57.036 50.000 0.00 0.00 43.64 3.82
499 970 1.822425 TTAGGAAACCTCCCCACACA 58.178 50.000 0.00 0.00 43.64 3.72
500 971 2.053747 TAGGAAACCTCCCCACACAT 57.946 50.000 0.00 0.00 43.64 3.21
501 972 1.158007 AGGAAACCTCCCCACACATT 58.842 50.000 0.00 0.00 43.64 2.71
502 973 2.354328 AGGAAACCTCCCCACACATTA 58.646 47.619 0.00 0.00 43.64 1.90
503 974 2.926329 AGGAAACCTCCCCACACATTAT 59.074 45.455 0.00 0.00 43.64 1.28
504 975 3.336694 AGGAAACCTCCCCACACATTATT 59.663 43.478 0.00 0.00 43.64 1.40
505 976 4.093743 GGAAACCTCCCCACACATTATTT 58.906 43.478 0.00 0.00 35.42 1.40
506 977 4.530553 GGAAACCTCCCCACACATTATTTT 59.469 41.667 0.00 0.00 35.42 1.82
507 978 5.012664 GGAAACCTCCCCACACATTATTTTT 59.987 40.000 0.00 0.00 35.42 1.94
528 999 7.769272 TTTTTGAGAAAACATTCCACACATC 57.231 32.000 0.00 0.00 30.07 3.06
529 1000 6.462552 TTTGAGAAAACATTCCACACATCA 57.537 33.333 0.00 0.00 0.00 3.07
530 1001 5.437289 TGAGAAAACATTCCACACATCAC 57.563 39.130 0.00 0.00 0.00 3.06
531 1002 4.886489 TGAGAAAACATTCCACACATCACA 59.114 37.500 0.00 0.00 0.00 3.58
532 1003 5.535783 TGAGAAAACATTCCACACATCACAT 59.464 36.000 0.00 0.00 0.00 3.21
533 1004 5.775686 AGAAAACATTCCACACATCACATG 58.224 37.500 0.00 0.00 0.00 3.21
534 1005 4.524316 AAACATTCCACACATCACATGG 57.476 40.909 0.00 0.00 34.58 3.66
535 1006 1.820519 ACATTCCACACATCACATGGC 59.179 47.619 0.00 0.00 33.20 4.40
536 1007 1.097232 ATTCCACACATCACATGGCG 58.903 50.000 0.00 0.00 33.20 5.69
537 1008 1.585267 TTCCACACATCACATGGCGC 61.585 55.000 0.00 0.00 33.20 6.53
538 1009 2.486504 CACACATCACATGGCGCC 59.513 61.111 22.73 22.73 33.60 6.53
539 1010 2.751436 ACACATCACATGGCGCCC 60.751 61.111 26.77 6.44 33.60 6.13
540 1011 2.438975 CACATCACATGGCGCCCT 60.439 61.111 26.77 12.40 33.60 5.19
541 1012 1.153188 CACATCACATGGCGCCCTA 60.153 57.895 26.77 6.41 33.60 3.53
542 1013 0.535780 CACATCACATGGCGCCCTAT 60.536 55.000 26.77 9.10 33.60 2.57
543 1014 0.535780 ACATCACATGGCGCCCTATG 60.536 55.000 26.77 23.81 33.60 2.23
544 1015 0.535780 CATCACATGGCGCCCTATGT 60.536 55.000 26.77 24.53 37.99 2.29
545 1016 0.250467 ATCACATGGCGCCCTATGTC 60.250 55.000 25.12 0.00 35.46 3.06
546 1017 1.153188 CACATGGCGCCCTATGTCA 60.153 57.895 25.12 6.12 35.46 3.58
547 1018 0.747644 CACATGGCGCCCTATGTCAA 60.748 55.000 25.12 5.34 35.46 3.18
548 1019 0.464373 ACATGGCGCCCTATGTCAAG 60.464 55.000 26.77 2.14 32.32 3.02
549 1020 0.179048 CATGGCGCCCTATGTCAAGA 60.179 55.000 26.77 0.00 0.00 3.02
550 1021 0.179045 ATGGCGCCCTATGTCAAGAC 60.179 55.000 26.77 0.00 0.00 3.01
551 1022 1.220749 GGCGCCCTATGTCAAGACA 59.779 57.895 18.11 5.24 46.44 3.41
552 1023 0.392461 GGCGCCCTATGTCAAGACAA 60.392 55.000 18.11 0.00 45.41 3.18
553 1024 1.668419 GCGCCCTATGTCAAGACAAT 58.332 50.000 7.02 0.00 45.41 2.71
554 1025 2.484770 GGCGCCCTATGTCAAGACAATA 60.485 50.000 18.11 0.65 45.41 1.90
555 1026 2.802816 GCGCCCTATGTCAAGACAATAG 59.197 50.000 7.02 9.10 45.41 1.73
556 1027 3.492656 GCGCCCTATGTCAAGACAATAGA 60.493 47.826 7.02 0.00 45.41 1.98
557 1028 4.302455 CGCCCTATGTCAAGACAATAGAG 58.698 47.826 7.02 3.05 45.41 2.43
558 1029 4.636249 GCCCTATGTCAAGACAATAGAGG 58.364 47.826 7.02 10.79 45.41 3.69
559 1030 4.345257 GCCCTATGTCAAGACAATAGAGGA 59.655 45.833 17.99 0.00 45.41 3.71
560 1031 5.510520 GCCCTATGTCAAGACAATAGAGGAG 60.511 48.000 17.99 12.26 45.41 3.69
561 1032 5.011533 CCCTATGTCAAGACAATAGAGGAGG 59.988 48.000 17.99 11.45 45.41 4.30
562 1033 5.835819 CCTATGTCAAGACAATAGAGGAGGA 59.164 44.000 7.02 0.00 45.41 3.71
563 1034 6.325028 CCTATGTCAAGACAATAGAGGAGGAA 59.675 42.308 7.02 0.00 45.41 3.36
564 1035 5.667539 TGTCAAGACAATAGAGGAGGAAG 57.332 43.478 0.00 0.00 38.56 3.46
565 1036 5.333581 TGTCAAGACAATAGAGGAGGAAGA 58.666 41.667 0.00 0.00 38.56 2.87
566 1037 5.780282 TGTCAAGACAATAGAGGAGGAAGAA 59.220 40.000 0.00 0.00 38.56 2.52
567 1038 6.270000 TGTCAAGACAATAGAGGAGGAAGAAA 59.730 38.462 0.00 0.00 38.56 2.52
568 1039 6.816140 GTCAAGACAATAGAGGAGGAAGAAAG 59.184 42.308 0.00 0.00 0.00 2.62
569 1040 6.726299 TCAAGACAATAGAGGAGGAAGAAAGA 59.274 38.462 0.00 0.00 0.00 2.52
570 1041 7.401493 TCAAGACAATAGAGGAGGAAGAAAGAT 59.599 37.037 0.00 0.00 0.00 2.40
571 1042 7.747809 AGACAATAGAGGAGGAAGAAAGATT 57.252 36.000 0.00 0.00 0.00 2.40
572 1043 7.563906 AGACAATAGAGGAGGAAGAAAGATTG 58.436 38.462 0.00 0.00 0.00 2.67
573 1044 6.118852 ACAATAGAGGAGGAAGAAAGATTGC 58.881 40.000 0.00 0.00 0.00 3.56
574 1045 3.643199 AGAGGAGGAAGAAAGATTGCC 57.357 47.619 0.00 0.00 0.00 4.52
575 1046 2.915604 AGAGGAGGAAGAAAGATTGCCA 59.084 45.455 0.00 0.00 0.00 4.92
576 1047 3.331889 AGAGGAGGAAGAAAGATTGCCAA 59.668 43.478 0.00 0.00 0.00 4.52
577 1048 4.082125 GAGGAGGAAGAAAGATTGCCAAA 58.918 43.478 0.00 0.00 0.00 3.28
578 1049 4.482990 AGGAGGAAGAAAGATTGCCAAAA 58.517 39.130 0.00 0.00 0.00 2.44
579 1050 4.525874 AGGAGGAAGAAAGATTGCCAAAAG 59.474 41.667 0.00 0.00 0.00 2.27
580 1051 4.524328 GGAGGAAGAAAGATTGCCAAAAGA 59.476 41.667 0.00 0.00 0.00 2.52
581 1052 5.336293 GGAGGAAGAAAGATTGCCAAAAGAG 60.336 44.000 0.00 0.00 0.00 2.85
582 1053 5.388654 AGGAAGAAAGATTGCCAAAAGAGA 58.611 37.500 0.00 0.00 0.00 3.10
583 1054 5.476254 AGGAAGAAAGATTGCCAAAAGAGAG 59.524 40.000 0.00 0.00 0.00 3.20
584 1055 5.336293 GGAAGAAAGATTGCCAAAAGAGAGG 60.336 44.000 0.00 0.00 0.00 3.69
585 1056 4.990526 AGAAAGATTGCCAAAAGAGAGGA 58.009 39.130 0.00 0.00 0.00 3.71
586 1057 5.008980 AGAAAGATTGCCAAAAGAGAGGAG 58.991 41.667 0.00 0.00 0.00 3.69
587 1058 3.362870 AGATTGCCAAAAGAGAGGAGG 57.637 47.619 0.00 0.00 0.00 4.30
588 1059 2.915604 AGATTGCCAAAAGAGAGGAGGA 59.084 45.455 0.00 0.00 0.00 3.71
589 1060 3.331889 AGATTGCCAAAAGAGAGGAGGAA 59.668 43.478 0.00 0.00 0.00 3.36
590 1061 2.867109 TGCCAAAAGAGAGGAGGAAG 57.133 50.000 0.00 0.00 0.00 3.46
591 1062 2.338809 TGCCAAAAGAGAGGAGGAAGA 58.661 47.619 0.00 0.00 0.00 2.87
592 1063 2.711009 TGCCAAAAGAGAGGAGGAAGAA 59.289 45.455 0.00 0.00 0.00 2.52
593 1064 3.138283 TGCCAAAAGAGAGGAGGAAGAAA 59.862 43.478 0.00 0.00 0.00 2.52
594 1065 3.755905 GCCAAAAGAGAGGAGGAAGAAAG 59.244 47.826 0.00 0.00 0.00 2.62
595 1066 4.505742 GCCAAAAGAGAGGAGGAAGAAAGA 60.506 45.833 0.00 0.00 0.00 2.52
596 1067 5.806079 GCCAAAAGAGAGGAGGAAGAAAGAT 60.806 44.000 0.00 0.00 0.00 2.40
597 1068 6.244654 CCAAAAGAGAGGAGGAAGAAAGATT 58.755 40.000 0.00 0.00 0.00 2.40
598 1069 6.150809 CCAAAAGAGAGGAGGAAGAAAGATTG 59.849 42.308 0.00 0.00 0.00 2.67
599 1070 5.434182 AAGAGAGGAGGAAGAAAGATTGG 57.566 43.478 0.00 0.00 0.00 3.16
600 1071 4.434195 AGAGAGGAGGAAGAAAGATTGGT 58.566 43.478 0.00 0.00 0.00 3.67
601 1072 4.224818 AGAGAGGAGGAAGAAAGATTGGTG 59.775 45.833 0.00 0.00 0.00 4.17
602 1073 4.171234 AGAGGAGGAAGAAAGATTGGTGA 58.829 43.478 0.00 0.00 0.00 4.02
603 1074 4.787534 AGAGGAGGAAGAAAGATTGGTGAT 59.212 41.667 0.00 0.00 0.00 3.06
604 1075 5.966935 AGAGGAGGAAGAAAGATTGGTGATA 59.033 40.000 0.00 0.00 0.00 2.15
605 1076 6.099557 AGAGGAGGAAGAAAGATTGGTGATAG 59.900 42.308 0.00 0.00 0.00 2.08
606 1077 5.131809 AGGAGGAAGAAAGATTGGTGATAGG 59.868 44.000 0.00 0.00 0.00 2.57
607 1078 5.372373 GAGGAAGAAAGATTGGTGATAGGG 58.628 45.833 0.00 0.00 0.00 3.53
608 1079 3.885901 GGAAGAAAGATTGGTGATAGGGC 59.114 47.826 0.00 0.00 0.00 5.19
609 1080 3.584733 AGAAAGATTGGTGATAGGGCC 57.415 47.619 0.00 0.00 0.00 5.80
615 1086 3.529319 AGATTGGTGATAGGGCCTTTTCT 59.471 43.478 13.45 0.00 0.00 2.52
616 1087 4.726825 AGATTGGTGATAGGGCCTTTTCTA 59.273 41.667 13.45 0.00 0.00 2.10
621 1092 4.202326 GGTGATAGGGCCTTTTCTAATCGA 60.202 45.833 13.45 0.00 0.00 3.59
635 1106 0.107017 AATCGACAGATTGGGCTGGG 60.107 55.000 0.00 0.00 44.76 4.45
636 1107 2.615227 ATCGACAGATTGGGCTGGGC 62.615 60.000 0.00 0.00 40.20 5.36
647 1118 4.684134 GCTGGGCTGGGCTTGGAA 62.684 66.667 0.00 0.00 0.00 3.53
659 1130 1.304713 CTTGGAATGGGCTGCACCT 60.305 57.895 0.00 0.00 39.10 4.00
674 1145 3.466836 TGCACCTTTAGTTCACAGTCTG 58.533 45.455 0.00 0.00 0.00 3.51
675 1146 2.224314 GCACCTTTAGTTCACAGTCTGC 59.776 50.000 0.00 0.00 0.00 4.26
677 1148 2.364324 ACCTTTAGTTCACAGTCTGCGA 59.636 45.455 0.00 0.00 0.00 5.10
678 1149 3.181469 ACCTTTAGTTCACAGTCTGCGAA 60.181 43.478 0.00 0.00 0.00 4.70
681 1152 4.841443 TTAGTTCACAGTCTGCGAACTA 57.159 40.909 27.97 27.97 44.90 2.24
682 1153 3.944055 AGTTCACAGTCTGCGAACTAT 57.056 42.857 27.18 10.90 44.90 2.12
684 1155 3.508012 AGTTCACAGTCTGCGAACTATCT 59.492 43.478 27.18 10.00 44.90 1.98
685 1156 3.766676 TCACAGTCTGCGAACTATCTC 57.233 47.619 0.00 0.00 0.00 2.75
686 1157 3.081804 TCACAGTCTGCGAACTATCTCA 58.918 45.455 0.00 0.00 0.00 3.27
688 1159 2.159310 ACAGTCTGCGAACTATCTCAGC 60.159 50.000 0.00 0.00 38.11 4.26
691 1162 1.678627 TCTGCGAACTATCTCAGCTCC 59.321 52.381 0.00 0.00 38.11 4.70
693 1164 0.032815 GCGAACTATCTCAGCTCCCC 59.967 60.000 0.00 0.00 0.00 4.81
724 1220 1.079438 GTCCCCACTCTCCACTCCT 59.921 63.158 0.00 0.00 0.00 3.69
736 1232 1.218585 CACTCCTCTCAGCAGCTGG 59.781 63.158 22.62 12.98 31.51 4.85
757 1253 3.534721 GTCGGAAGGACAGAAAGGG 57.465 57.895 0.00 0.00 45.36 3.95
760 1256 1.198759 CGGAAGGACAGAAAGGGGGA 61.199 60.000 0.00 0.00 0.00 4.81
831 1329 4.060372 TCGGATCCGATCGAGGTC 57.940 61.111 32.59 12.24 44.01 3.85
843 1341 2.936032 GAGGTCAGCCCACCCCTT 60.936 66.667 0.00 0.00 37.09 3.95
849 1347 2.211279 AGCCCACCCCTTCTCCTT 59.789 61.111 0.00 0.00 0.00 3.36
851 1349 2.985116 GCCCACCCCTTCTCCTTCC 61.985 68.421 0.00 0.00 0.00 3.46
852 1350 2.670148 CCCACCCCTTCTCCTTCCG 61.670 68.421 0.00 0.00 0.00 4.30
855 1353 1.990614 ACCCCTTCTCCTTCCGCTC 60.991 63.158 0.00 0.00 0.00 5.03
856 1354 2.736826 CCCCTTCTCCTTCCGCTCC 61.737 68.421 0.00 0.00 0.00 4.70
858 1356 1.268283 CCCTTCTCCTTCCGCTCCTT 61.268 60.000 0.00 0.00 0.00 3.36
860 1358 1.190643 CTTCTCCTTCCGCTCCTTCT 58.809 55.000 0.00 0.00 0.00 2.85
861 1359 1.136110 CTTCTCCTTCCGCTCCTTCTC 59.864 57.143 0.00 0.00 0.00 2.87
862 1360 0.684805 TCTCCTTCCGCTCCTTCTCC 60.685 60.000 0.00 0.00 0.00 3.71
863 1361 0.972983 CTCCTTCCGCTCCTTCTCCA 60.973 60.000 0.00 0.00 0.00 3.86
864 1362 0.325671 TCCTTCCGCTCCTTCTCCAT 60.326 55.000 0.00 0.00 0.00 3.41
865 1363 0.105778 CCTTCCGCTCCTTCTCCATC 59.894 60.000 0.00 0.00 0.00 3.51
867 1365 2.311463 CTTCCGCTCCTTCTCCATCTA 58.689 52.381 0.00 0.00 0.00 1.98
868 1366 2.454336 TCCGCTCCTTCTCCATCTAA 57.546 50.000 0.00 0.00 0.00 2.10
870 1368 2.894126 TCCGCTCCTTCTCCATCTAATC 59.106 50.000 0.00 0.00 0.00 1.75
872 1370 4.082845 CCGCTCCTTCTCCATCTAATCTA 58.917 47.826 0.00 0.00 0.00 1.98
878 1376 7.649702 TCCTTCTCCATCTAATCTACTCCTA 57.350 40.000 0.00 0.00 0.00 2.94
879 1377 7.695055 TCCTTCTCCATCTAATCTACTCCTAG 58.305 42.308 0.00 0.00 0.00 3.02
880 1378 6.377146 CCTTCTCCATCTAATCTACTCCTAGC 59.623 46.154 0.00 0.00 0.00 3.42
881 1379 6.712114 TCTCCATCTAATCTACTCCTAGCT 57.288 41.667 0.00 0.00 0.00 3.32
882 1380 7.816300 TCTCCATCTAATCTACTCCTAGCTA 57.184 40.000 0.00 0.00 0.00 3.32
884 1382 8.841757 TCTCCATCTAATCTACTCCTAGCTATT 58.158 37.037 0.00 0.00 0.00 1.73
885 1383 9.120538 CTCCATCTAATCTACTCCTAGCTATTC 57.879 40.741 0.00 0.00 0.00 1.75
886 1384 8.056400 TCCATCTAATCTACTCCTAGCTATTCC 58.944 40.741 0.00 0.00 0.00 3.01
888 1386 8.902806 CATCTAATCTACTCCTAGCTATTCCTG 58.097 40.741 0.00 0.00 0.00 3.86
889 1387 7.991174 TCTAATCTACTCCTAGCTATTCCTGT 58.009 38.462 0.00 0.00 0.00 4.00
890 1388 8.449625 TCTAATCTACTCCTAGCTATTCCTGTT 58.550 37.037 0.00 0.00 0.00 3.16
891 1389 7.922699 AATCTACTCCTAGCTATTCCTGTTT 57.077 36.000 0.00 0.00 0.00 2.83
893 1391 6.674573 TCTACTCCTAGCTATTCCTGTTTCT 58.325 40.000 0.00 0.00 0.00 2.52
894 1392 7.126733 TCTACTCCTAGCTATTCCTGTTTCTT 58.873 38.462 0.00 0.00 0.00 2.52
895 1393 6.628644 ACTCCTAGCTATTCCTGTTTCTTT 57.371 37.500 0.00 0.00 0.00 2.52
896 1394 7.021998 ACTCCTAGCTATTCCTGTTTCTTTT 57.978 36.000 0.00 0.00 0.00 2.27
897 1395 7.106890 ACTCCTAGCTATTCCTGTTTCTTTTC 58.893 38.462 0.00 0.00 0.00 2.29
898 1396 7.037945 ACTCCTAGCTATTCCTGTTTCTTTTCT 60.038 37.037 0.00 0.00 0.00 2.52
899 1397 7.690256 TCCTAGCTATTCCTGTTTCTTTTCTT 58.310 34.615 0.00 0.00 0.00 2.52
900 1398 7.824779 TCCTAGCTATTCCTGTTTCTTTTCTTC 59.175 37.037 0.00 0.00 0.00 2.87
901 1399 6.487689 AGCTATTCCTGTTTCTTTTCTTCG 57.512 37.500 0.00 0.00 0.00 3.79
902 1400 5.998363 AGCTATTCCTGTTTCTTTTCTTCGT 59.002 36.000 0.00 0.00 0.00 3.85
903 1401 7.159372 AGCTATTCCTGTTTCTTTTCTTCGTA 58.841 34.615 0.00 0.00 0.00 3.43
904 1402 7.824779 AGCTATTCCTGTTTCTTTTCTTCGTAT 59.175 33.333 0.00 0.00 0.00 3.06
905 1403 8.451748 GCTATTCCTGTTTCTTTTCTTCGTATT 58.548 33.333 0.00 0.00 0.00 1.89
909 1407 9.511144 TTCCTGTTTCTTTTCTTCGTATTTTTC 57.489 29.630 0.00 0.00 0.00 2.29
910 1408 8.132995 TCCTGTTTCTTTTCTTCGTATTTTTCC 58.867 33.333 0.00 0.00 0.00 3.13
911 1409 7.381408 CCTGTTTCTTTTCTTCGTATTTTTCCC 59.619 37.037 0.00 0.00 0.00 3.97
912 1410 7.204604 TGTTTCTTTTCTTCGTATTTTTCCCC 58.795 34.615 0.00 0.00 0.00 4.81
913 1411 5.970317 TCTTTTCTTCGTATTTTTCCCCC 57.030 39.130 0.00 0.00 0.00 5.40
914 1412 5.637127 TCTTTTCTTCGTATTTTTCCCCCT 58.363 37.500 0.00 0.00 0.00 4.79
915 1413 5.708697 TCTTTTCTTCGTATTTTTCCCCCTC 59.291 40.000 0.00 0.00 0.00 4.30
916 1414 3.639672 TCTTCGTATTTTTCCCCCTCC 57.360 47.619 0.00 0.00 0.00 4.30
917 1415 3.187112 TCTTCGTATTTTTCCCCCTCCT 58.813 45.455 0.00 0.00 0.00 3.69
918 1416 4.364470 TCTTCGTATTTTTCCCCCTCCTA 58.636 43.478 0.00 0.00 0.00 2.94
919 1417 4.407945 TCTTCGTATTTTTCCCCCTCCTAG 59.592 45.833 0.00 0.00 0.00 3.02
920 1418 2.436911 TCGTATTTTTCCCCCTCCTAGC 59.563 50.000 0.00 0.00 0.00 3.42
921 1419 2.171870 CGTATTTTTCCCCCTCCTAGCA 59.828 50.000 0.00 0.00 0.00 3.49
922 1420 3.744530 CGTATTTTTCCCCCTCCTAGCAG 60.745 52.174 0.00 0.00 0.00 4.24
923 1421 2.053747 TTTTTCCCCCTCCTAGCAGA 57.946 50.000 0.00 0.00 0.00 4.26
937 1435 1.362224 AGCAGAAAACCCTAGCCAGA 58.638 50.000 0.00 0.00 0.00 3.86
938 1436 1.918957 AGCAGAAAACCCTAGCCAGAT 59.081 47.619 0.00 0.00 0.00 2.90
939 1437 2.310052 AGCAGAAAACCCTAGCCAGATT 59.690 45.455 0.00 0.00 0.00 2.40
940 1438 3.092301 GCAGAAAACCCTAGCCAGATTT 58.908 45.455 0.00 0.00 0.00 2.17
941 1439 3.129462 GCAGAAAACCCTAGCCAGATTTC 59.871 47.826 0.00 0.00 0.00 2.17
942 1440 3.696548 CAGAAAACCCTAGCCAGATTTCC 59.303 47.826 0.00 0.00 0.00 3.13
948 1452 0.767998 CTAGCCAGATTTCCCCTCCC 59.232 60.000 0.00 0.00 0.00 4.30
949 1453 0.045623 TAGCCAGATTTCCCCTCCCA 59.954 55.000 0.00 0.00 0.00 4.37
953 1457 1.570501 CCAGATTTCCCCTCCCAATCA 59.429 52.381 0.00 0.00 30.51 2.57
964 1468 3.309848 CCCTCCCAATCAAACCCTAACAT 60.310 47.826 0.00 0.00 0.00 2.71
973 1477 1.305886 AACCCTAACATTCCTCCCCC 58.694 55.000 0.00 0.00 0.00 5.40
1001 1506 0.469144 GGCGGAGAGAGGAAGGAGAT 60.469 60.000 0.00 0.00 0.00 2.75
1003 1508 1.327303 CGGAGAGAGGAAGGAGATGG 58.673 60.000 0.00 0.00 0.00 3.51
1004 1509 1.047801 GGAGAGAGGAAGGAGATGGC 58.952 60.000 0.00 0.00 0.00 4.40
1013 1518 1.980784 AAGGAGATGGCGCTGCTGAT 61.981 55.000 7.64 0.00 36.64 2.90
1016 1521 2.203112 GATGGCGCTGCTGATGGA 60.203 61.111 7.64 0.00 0.00 3.41
1059 1567 3.468063 GGGTAAGATCCCGCCGAT 58.532 61.111 0.00 0.00 37.93 4.18
1065 1573 4.996434 GATCCCGCCGATGCCCTG 62.996 72.222 0.00 0.00 0.00 4.45
1090 1598 1.631405 CCCCCTCTTCATTTTGCACA 58.369 50.000 0.00 0.00 0.00 4.57
1091 1599 2.181975 CCCCCTCTTCATTTTGCACAT 58.818 47.619 0.00 0.00 0.00 3.21
1092 1600 2.167075 CCCCCTCTTCATTTTGCACATC 59.833 50.000 0.00 0.00 0.00 3.06
1093 1601 2.159338 CCCCTCTTCATTTTGCACATCG 60.159 50.000 0.00 0.00 0.00 3.84
1094 1602 2.523015 CCTCTTCATTTTGCACATCGC 58.477 47.619 0.00 0.00 42.89 4.58
1111 1619 2.941333 CACCACTTGCTCTGTGCG 59.059 61.111 0.00 0.00 46.63 5.34
1112 1620 1.889105 CACCACTTGCTCTGTGCGT 60.889 57.895 0.00 0.00 46.63 5.24
1113 1621 0.599991 CACCACTTGCTCTGTGCGTA 60.600 55.000 0.00 0.00 46.63 4.42
1114 1622 0.321671 ACCACTTGCTCTGTGCGTAT 59.678 50.000 0.00 0.00 46.63 3.06
1115 1623 0.723414 CCACTTGCTCTGTGCGTATG 59.277 55.000 0.00 0.00 46.63 2.39
1116 1624 1.432514 CACTTGCTCTGTGCGTATGT 58.567 50.000 0.00 0.00 46.63 2.29
1117 1625 1.127397 CACTTGCTCTGTGCGTATGTG 59.873 52.381 0.00 0.78 46.63 3.21
1118 1626 1.000843 ACTTGCTCTGTGCGTATGTGA 59.999 47.619 0.00 0.00 46.63 3.58
1119 1627 2.068519 CTTGCTCTGTGCGTATGTGAA 58.931 47.619 0.00 0.00 46.63 3.18
1120 1628 1.713597 TGCTCTGTGCGTATGTGAAG 58.286 50.000 0.00 0.00 46.63 3.02
1121 1629 0.371645 GCTCTGTGCGTATGTGAAGC 59.628 55.000 0.00 0.00 0.00 3.86
1122 1630 0.642291 CTCTGTGCGTATGTGAAGCG 59.358 55.000 0.00 0.00 34.91 4.68
1123 1631 0.735978 TCTGTGCGTATGTGAAGCGG 60.736 55.000 0.00 0.00 34.91 5.52
1124 1632 1.005512 TGTGCGTATGTGAAGCGGT 60.006 52.632 0.00 0.00 34.91 5.68
1125 1633 0.601576 TGTGCGTATGTGAAGCGGTT 60.602 50.000 0.00 0.00 34.91 4.44
1126 1634 0.179225 GTGCGTATGTGAAGCGGTTG 60.179 55.000 3.70 0.00 34.91 3.77
1127 1635 0.319986 TGCGTATGTGAAGCGGTTGA 60.320 50.000 3.70 0.00 34.91 3.18
1128 1636 0.370273 GCGTATGTGAAGCGGTTGAG 59.630 55.000 3.70 0.00 0.00 3.02
1129 1637 0.999406 CGTATGTGAAGCGGTTGAGG 59.001 55.000 3.70 0.00 0.00 3.86
1130 1638 1.369625 GTATGTGAAGCGGTTGAGGG 58.630 55.000 3.70 0.00 0.00 4.30
1131 1639 0.392461 TATGTGAAGCGGTTGAGGGC 60.392 55.000 3.70 0.00 0.00 5.19
1132 1640 2.032681 GTGAAGCGGTTGAGGGCT 59.967 61.111 3.70 0.00 42.33 5.19
1133 1641 2.032528 TGAAGCGGTTGAGGGCTG 59.967 61.111 3.70 0.00 39.93 4.85
1134 1642 2.347490 GAAGCGGTTGAGGGCTGA 59.653 61.111 3.70 0.00 39.93 4.26
1135 1643 1.743252 GAAGCGGTTGAGGGCTGAG 60.743 63.158 3.70 0.00 39.93 3.35
1136 1644 2.172483 GAAGCGGTTGAGGGCTGAGA 62.172 60.000 3.70 0.00 39.93 3.27
1137 1645 2.125350 GCGGTTGAGGGCTGAGAG 60.125 66.667 0.00 0.00 0.00 3.20
1138 1646 2.125350 CGGTTGAGGGCTGAGAGC 60.125 66.667 0.00 0.00 41.46 4.09
1139 1647 2.654079 CGGTTGAGGGCTGAGAGCT 61.654 63.158 0.00 0.00 41.99 4.09
1140 1648 1.220477 GGTTGAGGGCTGAGAGCTC 59.780 63.158 5.27 5.27 43.65 4.09
1145 1653 3.537388 GGGCTGAGAGCTCTCCTC 58.463 66.667 35.07 26.29 39.07 3.71
1156 1664 4.370364 GAGCTCTCCTCTTACTCTTGTG 57.630 50.000 6.43 0.00 37.60 3.33
1157 1665 3.761752 GAGCTCTCCTCTTACTCTTGTGT 59.238 47.826 6.43 0.00 37.60 3.72
1158 1666 4.924625 AGCTCTCCTCTTACTCTTGTGTA 58.075 43.478 0.00 0.00 0.00 2.90
1159 1667 5.515106 AGCTCTCCTCTTACTCTTGTGTAT 58.485 41.667 0.00 0.00 0.00 2.29
1160 1668 5.592688 AGCTCTCCTCTTACTCTTGTGTATC 59.407 44.000 0.00 0.00 0.00 2.24
1161 1669 5.504994 GCTCTCCTCTTACTCTTGTGTATCG 60.505 48.000 0.00 0.00 0.00 2.92
1162 1670 5.498393 TCTCCTCTTACTCTTGTGTATCGT 58.502 41.667 0.00 0.00 0.00 3.73
1163 1671 5.585445 TCTCCTCTTACTCTTGTGTATCGTC 59.415 44.000 0.00 0.00 0.00 4.20
1164 1672 4.639310 TCCTCTTACTCTTGTGTATCGTCC 59.361 45.833 0.00 0.00 0.00 4.79
1165 1673 4.398358 CCTCTTACTCTTGTGTATCGTCCA 59.602 45.833 0.00 0.00 0.00 4.02
1166 1674 5.105877 CCTCTTACTCTTGTGTATCGTCCAA 60.106 44.000 0.00 0.00 0.00 3.53
1167 1675 5.950883 TCTTACTCTTGTGTATCGTCCAAG 58.049 41.667 0.00 0.00 37.51 3.61
1168 1676 5.708697 TCTTACTCTTGTGTATCGTCCAAGA 59.291 40.000 0.00 0.00 41.55 3.02
1169 1677 6.377429 TCTTACTCTTGTGTATCGTCCAAGAT 59.623 38.462 0.00 0.00 42.51 2.40
1170 1678 5.000012 ACTCTTGTGTATCGTCCAAGATC 58.000 43.478 0.00 0.00 42.51 2.75
1171 1679 4.462834 ACTCTTGTGTATCGTCCAAGATCA 59.537 41.667 0.00 0.00 42.51 2.92
1172 1680 4.998788 TCTTGTGTATCGTCCAAGATCAG 58.001 43.478 0.00 0.00 39.58 2.90
1173 1681 3.165058 TGTGTATCGTCCAAGATCAGC 57.835 47.619 0.00 0.00 32.39 4.26
1174 1682 2.495669 TGTGTATCGTCCAAGATCAGCA 59.504 45.455 0.00 0.00 32.39 4.41
1175 1683 3.119291 GTGTATCGTCCAAGATCAGCAG 58.881 50.000 0.00 0.00 32.39 4.24
1176 1684 3.023832 TGTATCGTCCAAGATCAGCAGA 58.976 45.455 0.00 0.00 32.39 4.26
1177 1685 2.593346 ATCGTCCAAGATCAGCAGAC 57.407 50.000 0.00 0.00 0.00 3.51
1178 1686 1.256812 TCGTCCAAGATCAGCAGACA 58.743 50.000 0.00 0.00 0.00 3.41
1179 1687 1.827344 TCGTCCAAGATCAGCAGACAT 59.173 47.619 0.00 0.00 0.00 3.06
1180 1688 2.234661 TCGTCCAAGATCAGCAGACATT 59.765 45.455 0.00 0.00 0.00 2.71
1181 1689 2.350804 CGTCCAAGATCAGCAGACATTG 59.649 50.000 0.00 0.00 0.00 2.82
1182 1690 2.681848 GTCCAAGATCAGCAGACATTGG 59.318 50.000 14.63 14.63 41.08 3.16
1201 1709 1.468054 GGTCAATTTGCGTGCCTGATC 60.468 52.381 0.00 0.00 0.00 2.92
1211 1719 2.124403 GCCTGATCAGTGGCCCTG 60.124 66.667 21.11 13.43 43.11 4.45
1212 1720 2.976490 GCCTGATCAGTGGCCCTGT 61.976 63.158 21.11 8.06 43.11 4.00
1215 1723 0.545171 CTGATCAGTGGCCCTGTGAT 59.455 55.000 14.95 14.23 42.19 3.06
1216 1724 0.253894 TGATCAGTGGCCCTGTGATG 59.746 55.000 14.55 0.00 42.19 3.07
1217 1725 1.077212 ATCAGTGGCCCTGTGATGC 60.077 57.895 17.55 0.00 42.19 3.91
1219 1727 3.321648 AGTGGCCCTGTGATGCGA 61.322 61.111 0.00 0.00 0.00 5.10
1220 1728 2.821366 GTGGCCCTGTGATGCGAG 60.821 66.667 0.00 0.00 0.00 5.03
1221 1729 4.100084 TGGCCCTGTGATGCGAGG 62.100 66.667 0.00 0.00 0.00 4.63
1222 1730 4.101448 GGCCCTGTGATGCGAGGT 62.101 66.667 0.00 0.00 0.00 3.85
1224 1732 2.821366 CCCTGTGATGCGAGGTGC 60.821 66.667 0.00 0.00 46.70 5.01
1228 1736 2.249557 CTGTGATGCGAGGTGCTTGC 62.250 60.000 0.00 0.00 46.63 4.01
1229 1737 3.120385 TGATGCGAGGTGCTTGCG 61.120 61.111 0.00 0.00 43.35 4.85
1230 1738 2.815211 GATGCGAGGTGCTTGCGA 60.815 61.111 0.00 0.00 43.35 5.10
1231 1739 2.806856 GATGCGAGGTGCTTGCGAG 61.807 63.158 0.00 0.00 43.35 5.03
1235 1743 2.558313 GAGGTGCTTGCGAGTTGC 59.442 61.111 2.14 0.00 46.70 4.17
1247 1766 1.308069 CGAGTTGCAAGGTGGATGGG 61.308 60.000 0.00 0.00 0.00 4.00
1248 1767 1.598701 GAGTTGCAAGGTGGATGGGC 61.599 60.000 0.00 0.00 0.00 5.36
1253 1772 1.318158 GCAAGGTGGATGGGCAAGAG 61.318 60.000 0.00 0.00 0.00 2.85
1276 1795 1.066358 AGTAGGCTCCGGCACTTTTAC 60.066 52.381 0.00 0.00 40.87 2.01
1277 1796 0.978151 TAGGCTCCGGCACTTTTACA 59.022 50.000 0.00 0.00 40.87 2.41
1279 1798 1.495951 GCTCCGGCACTTTTACACG 59.504 57.895 0.00 0.00 38.54 4.49
1288 1807 4.039703 GGCACTTTTACACGGTTTCTTTC 58.960 43.478 0.00 0.00 0.00 2.62
1291 1810 5.448089 GCACTTTTACACGGTTTCTTTCTCA 60.448 40.000 0.00 0.00 0.00 3.27
1292 1811 6.548171 CACTTTTACACGGTTTCTTTCTCAA 58.452 36.000 0.00 0.00 0.00 3.02
1310 1829 7.468141 TTCTCAAGTCTTGCTAGTGATCTAA 57.532 36.000 7.78 0.00 0.00 2.10
1314 1833 6.211584 TCAAGTCTTGCTAGTGATCTAACCTT 59.788 38.462 7.78 0.00 0.00 3.50
1325 1844 4.272748 GTGATCTAACCTTCGGTTAATGCC 59.727 45.833 6.90 0.00 45.92 4.40
1327 1846 4.563140 TCTAACCTTCGGTTAATGCCTT 57.437 40.909 6.90 0.00 45.92 4.35
1328 1847 4.913784 TCTAACCTTCGGTTAATGCCTTT 58.086 39.130 6.90 0.00 45.92 3.11
1329 1848 4.939439 TCTAACCTTCGGTTAATGCCTTTC 59.061 41.667 6.90 0.00 45.92 2.62
1340 1859 2.167161 TGCCTTTCGCATAACCACG 58.833 52.632 0.00 0.00 44.64 4.94
1344 1863 0.515127 CTTTCGCATAACCACGTGCA 59.485 50.000 10.91 0.00 41.32 4.57
1349 1868 1.135315 CATAACCACGTGCAGCAGC 59.865 57.895 10.91 0.00 42.57 5.25
1371 1890 1.996191 GCAGACGATGTCTCAACCTTC 59.004 52.381 0.00 0.00 41.37 3.46
1372 1891 2.610479 GCAGACGATGTCTCAACCTTCA 60.610 50.000 0.00 0.00 41.37 3.02
1373 1892 3.854666 CAGACGATGTCTCAACCTTCAT 58.145 45.455 0.00 0.00 41.37 2.57
1375 1894 4.092529 CAGACGATGTCTCAACCTTCATTG 59.907 45.833 0.00 0.00 41.37 2.82
1376 1895 2.744202 ACGATGTCTCAACCTTCATTGC 59.256 45.455 0.00 0.00 0.00 3.56
1378 1897 3.181513 CGATGTCTCAACCTTCATTGCTG 60.182 47.826 0.00 0.00 0.00 4.41
1381 1900 1.180029 CTCAACCTTCATTGCTGGGG 58.820 55.000 0.00 0.00 0.00 4.96
1407 1929 1.202348 GCTTGCCACATGACCCTTTAC 59.798 52.381 0.00 0.00 0.00 2.01
1408 1930 2.795329 CTTGCCACATGACCCTTTACT 58.205 47.619 0.00 0.00 0.00 2.24
1409 1931 2.969821 TGCCACATGACCCTTTACTT 57.030 45.000 0.00 0.00 0.00 2.24
1411 1933 4.374689 TGCCACATGACCCTTTACTTTA 57.625 40.909 0.00 0.00 0.00 1.85
1412 1934 4.331968 TGCCACATGACCCTTTACTTTAG 58.668 43.478 0.00 0.00 0.00 1.85
1413 1935 3.128764 GCCACATGACCCTTTACTTTAGC 59.871 47.826 0.00 0.00 0.00 3.09
1414 1936 4.331968 CCACATGACCCTTTACTTTAGCA 58.668 43.478 0.00 0.00 0.00 3.49
1415 1937 4.764823 CCACATGACCCTTTACTTTAGCAA 59.235 41.667 0.00 0.00 0.00 3.91
1420 1942 5.305585 TGACCCTTTACTTTAGCAACTCTG 58.694 41.667 0.00 0.00 0.00 3.35
1421 1943 5.071250 TGACCCTTTACTTTAGCAACTCTGA 59.929 40.000 0.00 0.00 0.00 3.27
1429 1951 9.730420 TTTACTTTAGCAACTCTGATGTTTTTC 57.270 29.630 0.00 0.00 0.00 2.29
1430 1952 6.739112 ACTTTAGCAACTCTGATGTTTTTCC 58.261 36.000 0.00 0.00 0.00 3.13
1436 1958 6.491403 AGCAACTCTGATGTTTTTCCAGTAAT 59.509 34.615 0.00 0.00 0.00 1.89
1439 1961 7.913674 ACTCTGATGTTTTTCCAGTAATCTC 57.086 36.000 0.00 0.00 0.00 2.75
1456 1978 6.991531 AGTAATCTCATCTGAAAAGCATCTCC 59.008 38.462 0.00 0.00 0.00 3.71
1482 2004 3.857052 TCATGTTTCGGTGTCTGGATAC 58.143 45.455 0.00 0.00 0.00 2.24
1495 2017 1.128878 CTGGATACTCGTCGCCGATAG 59.871 57.143 0.00 0.00 43.27 2.08
1497 2019 0.797542 GATACTCGTCGCCGATAGCT 59.202 55.000 0.00 0.00 43.27 3.32
1501 2023 0.866427 CTCGTCGCCGATAGCTAAGA 59.134 55.000 0.00 0.00 43.27 2.10
1502 2024 0.866427 TCGTCGCCGATAGCTAAGAG 59.134 55.000 0.00 0.00 38.40 2.85
1504 2026 0.311165 GTCGCCGATAGCTAAGAGCA 59.689 55.000 0.00 0.00 45.56 4.26
1531 2065 6.985188 TGCTAAGAATGTTTTACTGCCTAG 57.015 37.500 0.00 0.00 0.00 3.02
1544 2078 0.450583 TGCCTAGTGTAGAGAACGCG 59.549 55.000 3.53 3.53 43.67 6.01
1575 2109 4.537135 AGTCGCCTACTCAAATCAAAGA 57.463 40.909 0.00 0.00 30.33 2.52
1759 2319 0.328258 CCCCAACTCCAGTGGTAAGG 59.672 60.000 9.54 7.33 0.00 2.69
1767 2327 3.007323 AGTGGTAAGGTCCCGCCC 61.007 66.667 0.00 0.00 38.26 6.13
1775 2335 3.782443 GGTCCCGCCCGATGTTCT 61.782 66.667 0.00 0.00 0.00 3.01
1785 2354 3.611530 CGCCCGATGTTCTTTCATTTTGT 60.612 43.478 0.00 0.00 0.00 2.83
1807 2376 1.797046 CAGTGCACTGCTTACTCTGTG 59.203 52.381 32.39 6.92 37.15 3.66
1809 2378 1.528586 GTGCACTGCTTACTCTGTGTG 59.471 52.381 10.32 0.00 37.94 3.82
1822 2391 2.048877 GTGTGTGCAATGCTGGCC 60.049 61.111 6.82 0.00 0.00 5.36
1856 2425 0.313043 ATGTCTGCTTTGTGTGCTGC 59.687 50.000 0.00 0.00 0.00 5.25
1864 2433 2.410730 GCTTTGTGTGCTGCATCATTTC 59.589 45.455 5.27 0.00 0.00 2.17
3366 4007 5.299279 TCAGAGGGTCTCAAACAATTGAAAC 59.701 40.000 13.59 0.84 44.64 2.78
3381 4042 2.844946 TGAAACGAAACCATCTGCTCA 58.155 42.857 0.00 0.00 0.00 4.26
3385 4052 1.066573 ACGAAACCATCTGCTCAGAGG 60.067 52.381 5.76 5.22 41.33 3.69
3408 4103 8.074613 AGGGTCTTAAAGCTTGTTAAGTTTTT 57.925 30.769 14.63 4.39 41.32 1.94
4237 5884 6.925610 TGATATTGATTGTTCTGCAGGTAC 57.074 37.500 15.13 12.96 0.00 3.34
4306 5953 6.093633 GGCATACGGAAGTTCTTCTATTTTGT 59.906 38.462 11.53 5.10 46.40 2.83
4316 5963 8.169977 AGTTCTTCTATTTTGTTGAGATGCAA 57.830 30.769 0.00 0.00 0.00 4.08
4333 5980 1.669795 GCAAACATGGCTAGTTGGTGC 60.670 52.381 0.00 4.45 0.00 5.01
4383 6033 0.675083 TCGACGCTTAAACTGTCCCA 59.325 50.000 0.00 0.00 0.00 4.37
4385 6035 1.154197 GACGCTTAAACTGTCCCACC 58.846 55.000 0.00 0.00 0.00 4.61
4408 6058 6.041409 ACCATGTAGTCTGTTGGATCATCTAG 59.959 42.308 0.00 0.00 33.36 2.43
4417 6067 7.543868 GTCTGTTGGATCATCTAGTATGTATGC 59.456 40.741 0.00 0.00 0.00 3.14
4418 6068 6.701340 TGTTGGATCATCTAGTATGTATGCC 58.299 40.000 0.00 0.00 0.00 4.40
4449 6115 3.635836 TGCTGAGATGTCTCCTCTATGTG 59.364 47.826 7.51 0.00 42.20 3.21
4588 6255 1.014564 GTGCCTGGTTAGTGACTCGC 61.015 60.000 0.00 0.00 0.00 5.03
4614 6281 1.892474 TGGTCCTGTTAATGCTTTGCC 59.108 47.619 0.00 0.00 0.00 4.52
4615 6282 2.171003 GGTCCTGTTAATGCTTTGCCT 58.829 47.619 0.00 0.00 0.00 4.75
4643 6310 1.134560 CGAGGTACTAGCAAGGTGGAC 59.865 57.143 0.00 0.00 41.55 4.02
4719 6470 3.194542 ACTGTGAGTCTTGCTAGTGATCC 59.805 47.826 0.00 0.00 0.00 3.36
4745 6496 5.163374 ACTGTGATAATGCTGCTCACATCTA 60.163 40.000 18.76 1.57 45.82 1.98
4903 6819 9.662545 CAGAAAAATGTTGTCAGTTTTTGTTTT 57.337 25.926 7.57 0.00 46.76 2.43
4969 6885 7.169140 AGTGTTGTGAGTTTTTGTTTGAACTTC 59.831 33.333 0.00 0.00 36.31 3.01
5029 6945 3.181456 GCTTGTCCTATTCTGGATCTGCT 60.181 47.826 0.00 0.00 38.52 4.24
5129 7047 7.362401 CCATCAAAGTCAGTTATCCAGGAAAAG 60.362 40.741 0.00 0.00 0.00 2.27
5175 7095 2.034066 CCAACCGGTGACTGCCAT 59.966 61.111 8.52 0.00 0.00 4.40
5196 7117 0.517316 GCGACATTTTGCTTCCGACT 59.483 50.000 0.00 0.00 0.00 4.18
5206 7127 2.281484 TTCCGACTGCACCTTGGC 60.281 61.111 0.00 0.00 0.00 4.52
5239 7160 2.849880 TGCGCATAAGGAAAATGCTC 57.150 45.000 5.66 0.00 46.05 4.26
5242 7163 2.542411 GCGCATAAGGAAAATGCTCCTG 60.542 50.000 0.30 0.00 45.59 3.86
5244 7165 3.242870 CGCATAAGGAAAATGCTCCTGTC 60.243 47.826 6.50 0.00 45.59 3.51
5245 7166 3.696051 GCATAAGGAAAATGCTCCTGTCA 59.304 43.478 0.93 0.00 45.59 3.58
5247 7168 5.336690 GCATAAGGAAAATGCTCCTGTCAAA 60.337 40.000 0.93 0.00 45.59 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.735873 GCAGAACCGGTATTGGACTAGTAC 60.736 50.000 8.00 0.00 0.00 2.73
31 32 2.167900 GCAGAACCGGTATTGGACTAGT 59.832 50.000 8.00 0.00 0.00 2.57
120 125 9.534565 TGAATTGTTTTCGGAAAATTATGAACA 57.465 25.926 17.98 8.23 32.22 3.18
121 126 9.791838 GTGAATTGTTTTCGGAAAATTATGAAC 57.208 29.630 17.98 10.07 32.22 3.18
122 127 9.534565 TGTGAATTGTTTTCGGAAAATTATGAA 57.465 25.926 17.98 7.74 32.22 2.57
123 128 9.703892 ATGTGAATTGTTTTCGGAAAATTATGA 57.296 25.926 17.98 4.77 32.22 2.15
124 129 9.956797 GATGTGAATTGTTTTCGGAAAATTATG 57.043 29.630 17.98 0.00 32.22 1.90
125 130 9.927668 AGATGTGAATTGTTTTCGGAAAATTAT 57.072 25.926 17.98 11.73 32.22 1.28
126 131 9.757227 AAGATGTGAATTGTTTTCGGAAAATTA 57.243 25.926 17.98 10.13 32.22 1.40
127 132 8.661352 AAGATGTGAATTGTTTTCGGAAAATT 57.339 26.923 17.98 9.29 32.22 1.82
128 133 8.661352 AAAGATGTGAATTGTTTTCGGAAAAT 57.339 26.923 17.98 3.18 32.22 1.82
129 134 8.485976 AAAAGATGTGAATTGTTTTCGGAAAA 57.514 26.923 11.68 11.68 0.00 2.29
130 135 9.587772 TTAAAAGATGTGAATTGTTTTCGGAAA 57.412 25.926 0.00 0.00 0.00 3.13
131 136 9.587772 TTTAAAAGATGTGAATTGTTTTCGGAA 57.412 25.926 0.00 0.00 0.00 4.30
132 137 9.587772 TTTTAAAAGATGTGAATTGTTTTCGGA 57.412 25.926 0.00 0.00 0.00 4.55
159 164 9.757227 TCAACTTTTCGGAAAATTATGAACATT 57.243 25.926 15.64 0.00 0.00 2.71
160 165 9.191995 GTCAACTTTTCGGAAAATTATGAACAT 57.808 29.630 15.64 0.00 0.00 2.71
227 232 7.907214 TTCCGTTTTTCCTTTTTCAAATTCA 57.093 28.000 0.00 0.00 0.00 2.57
299 306 8.445275 ACTTTTTGAAAACAAGAACAGGTTTT 57.555 26.923 0.00 0.00 46.57 2.43
305 312 7.491048 GCCAGATACTTTTTGAAAACAAGAACA 59.509 33.333 0.00 0.00 0.00 3.18
306 313 7.706607 AGCCAGATACTTTTTGAAAACAAGAAC 59.293 33.333 0.00 0.00 0.00 3.01
307 314 7.706179 CAGCCAGATACTTTTTGAAAACAAGAA 59.294 33.333 0.00 0.00 0.00 2.52
308 315 7.202526 CAGCCAGATACTTTTTGAAAACAAGA 58.797 34.615 0.00 0.00 0.00 3.02
309 316 6.421801 CCAGCCAGATACTTTTTGAAAACAAG 59.578 38.462 0.00 0.00 0.00 3.16
310 317 6.127196 ACCAGCCAGATACTTTTTGAAAACAA 60.127 34.615 0.00 0.00 0.00 2.83
311 318 5.362430 ACCAGCCAGATACTTTTTGAAAACA 59.638 36.000 0.00 0.00 0.00 2.83
312 319 5.842907 ACCAGCCAGATACTTTTTGAAAAC 58.157 37.500 0.00 0.00 0.00 2.43
313 320 5.833131 AGACCAGCCAGATACTTTTTGAAAA 59.167 36.000 0.00 0.00 0.00 2.29
314 321 5.241506 CAGACCAGCCAGATACTTTTTGAAA 59.758 40.000 0.00 0.00 0.00 2.69
315 322 4.761739 CAGACCAGCCAGATACTTTTTGAA 59.238 41.667 0.00 0.00 0.00 2.69
316 323 4.202461 ACAGACCAGCCAGATACTTTTTGA 60.202 41.667 0.00 0.00 0.00 2.69
317 324 4.074970 ACAGACCAGCCAGATACTTTTTG 58.925 43.478 0.00 0.00 0.00 2.44
323 794 2.028112 TGACAACAGACCAGCCAGATAC 60.028 50.000 0.00 0.00 0.00 2.24
340 811 7.702348 CACGAGAATTACTGATAGTTCATGACA 59.298 37.037 0.00 0.00 31.16 3.58
342 813 7.203218 CCACGAGAATTACTGATAGTTCATGA 58.797 38.462 0.00 0.00 31.16 3.07
344 815 5.986135 GCCACGAGAATTACTGATAGTTCAT 59.014 40.000 0.00 0.00 31.16 2.57
345 816 5.127194 AGCCACGAGAATTACTGATAGTTCA 59.873 40.000 0.00 0.00 31.16 3.18
346 817 5.593010 AGCCACGAGAATTACTGATAGTTC 58.407 41.667 0.00 0.00 0.00 3.01
348 819 4.261238 CGAGCCACGAGAATTACTGATAGT 60.261 45.833 0.00 0.00 45.77 2.12
349 820 4.222886 CGAGCCACGAGAATTACTGATAG 58.777 47.826 0.00 0.00 45.77 2.08
350 821 3.550233 GCGAGCCACGAGAATTACTGATA 60.550 47.826 5.11 0.00 45.77 2.15
352 823 1.469251 GCGAGCCACGAGAATTACTGA 60.469 52.381 5.11 0.00 45.77 3.41
353 824 0.924090 GCGAGCCACGAGAATTACTG 59.076 55.000 5.11 0.00 45.77 2.74
356 827 1.804598 TCGCGAGCCACGAGAATTA 59.195 52.632 3.71 0.00 46.42 1.40
357 828 2.571757 TCGCGAGCCACGAGAATT 59.428 55.556 3.71 0.00 46.42 2.17
361 832 0.317854 TCAATATCGCGAGCCACGAG 60.318 55.000 16.66 0.47 43.74 4.18
362 833 0.313987 ATCAATATCGCGAGCCACGA 59.686 50.000 16.66 7.73 45.77 4.35
363 834 0.436150 CATCAATATCGCGAGCCACG 59.564 55.000 16.66 1.69 45.66 4.94
364 835 1.457303 GACATCAATATCGCGAGCCAC 59.543 52.381 16.66 0.00 0.00 5.01
365 836 1.341209 AGACATCAATATCGCGAGCCA 59.659 47.619 16.66 2.11 0.00 4.75
366 837 2.071688 AGACATCAATATCGCGAGCC 57.928 50.000 16.66 0.00 0.00 4.70
367 838 2.797156 ACAAGACATCAATATCGCGAGC 59.203 45.455 16.66 0.00 0.00 5.03
368 839 3.798878 ACACAAGACATCAATATCGCGAG 59.201 43.478 16.66 0.00 0.00 5.03
369 840 3.780902 ACACAAGACATCAATATCGCGA 58.219 40.909 13.09 13.09 0.00 5.87
370 841 4.520743 AACACAAGACATCAATATCGCG 57.479 40.909 0.00 0.00 0.00 5.87
371 842 5.868257 TCAAACACAAGACATCAATATCGC 58.132 37.500 0.00 0.00 0.00 4.58
372 843 8.900511 AAATCAAACACAAGACATCAATATCG 57.099 30.769 0.00 0.00 0.00 2.92
375 846 9.681692 CAAGAAATCAAACACAAGACATCAATA 57.318 29.630 0.00 0.00 0.00 1.90
376 847 7.170320 GCAAGAAATCAAACACAAGACATCAAT 59.830 33.333 0.00 0.00 0.00 2.57
377 848 6.476380 GCAAGAAATCAAACACAAGACATCAA 59.524 34.615 0.00 0.00 0.00 2.57
378 849 5.978919 GCAAGAAATCAAACACAAGACATCA 59.021 36.000 0.00 0.00 0.00 3.07
379 850 5.116074 CGCAAGAAATCAAACACAAGACATC 59.884 40.000 0.00 0.00 43.02 3.06
380 851 4.977963 CGCAAGAAATCAAACACAAGACAT 59.022 37.500 0.00 0.00 43.02 3.06
381 852 4.350346 CGCAAGAAATCAAACACAAGACA 58.650 39.130 0.00 0.00 43.02 3.41
382 853 4.936396 CGCAAGAAATCAAACACAAGAC 57.064 40.909 0.00 0.00 43.02 3.01
398 869 2.916111 ACATACGCAAAAACTCGCAAG 58.084 42.857 0.00 0.00 0.00 4.01
399 870 3.341857 AACATACGCAAAAACTCGCAA 57.658 38.095 0.00 0.00 0.00 4.85
400 871 3.039405 CAAACATACGCAAAAACTCGCA 58.961 40.909 0.00 0.00 0.00 5.10
401 872 2.160156 GCAAACATACGCAAAAACTCGC 60.160 45.455 0.00 0.00 0.00 5.03
402 873 2.086849 CGCAAACATACGCAAAAACTCG 59.913 45.455 0.00 0.00 0.00 4.18
403 874 3.664628 CGCAAACATACGCAAAAACTC 57.335 42.857 0.00 0.00 0.00 3.01
412 883 1.072391 TACTGTGGCGCAAACATACG 58.928 50.000 10.83 4.25 0.00 3.06
413 884 1.129811 GGTACTGTGGCGCAAACATAC 59.870 52.381 10.83 15.35 0.00 2.39
414 885 1.444836 GGTACTGTGGCGCAAACATA 58.555 50.000 10.83 5.31 0.00 2.29
415 886 1.241315 GGGTACTGTGGCGCAAACAT 61.241 55.000 10.83 6.23 0.00 2.71
416 887 1.894756 GGGTACTGTGGCGCAAACA 60.895 57.895 10.83 12.59 0.00 2.83
417 888 1.852067 CTGGGTACTGTGGCGCAAAC 61.852 60.000 10.83 7.74 0.00 2.93
418 889 1.599518 CTGGGTACTGTGGCGCAAA 60.600 57.895 10.83 0.00 0.00 3.68
419 890 2.031919 CTGGGTACTGTGGCGCAA 59.968 61.111 10.83 0.00 0.00 4.85
420 891 3.234630 GACTGGGTACTGTGGCGCA 62.235 63.158 10.83 0.00 0.00 6.09
421 892 2.434359 GACTGGGTACTGTGGCGC 60.434 66.667 0.00 0.00 0.00 6.53
422 893 2.126071 CGACTGGGTACTGTGGCG 60.126 66.667 0.00 0.00 0.00 5.69
423 894 2.264794 CCGACTGGGTACTGTGGC 59.735 66.667 0.00 0.00 0.00 5.01
432 903 2.257409 ATTAGCAGCCACCGACTGGG 62.257 60.000 0.00 0.00 41.02 4.45
433 904 0.464036 TATTAGCAGCCACCGACTGG 59.536 55.000 0.00 0.00 44.08 4.00
434 905 1.539065 CCTATTAGCAGCCACCGACTG 60.539 57.143 0.00 0.00 38.22 3.51
435 906 0.753262 CCTATTAGCAGCCACCGACT 59.247 55.000 0.00 0.00 0.00 4.18
436 907 0.750850 TCCTATTAGCAGCCACCGAC 59.249 55.000 0.00 0.00 0.00 4.79
437 908 0.750850 GTCCTATTAGCAGCCACCGA 59.249 55.000 0.00 0.00 0.00 4.69
438 909 0.249911 GGTCCTATTAGCAGCCACCG 60.250 60.000 0.00 0.00 0.00 4.94
439 910 1.132500 AGGTCCTATTAGCAGCCACC 58.868 55.000 0.00 0.00 0.00 4.61
440 911 2.436173 AGAAGGTCCTATTAGCAGCCAC 59.564 50.000 0.00 0.00 0.00 5.01
441 912 2.764269 AGAAGGTCCTATTAGCAGCCA 58.236 47.619 0.00 0.00 0.00 4.75
442 913 3.495276 GGAAGAAGGTCCTATTAGCAGCC 60.495 52.174 0.00 0.00 34.56 4.85
443 914 3.495276 GGGAAGAAGGTCCTATTAGCAGC 60.495 52.174 0.00 0.00 37.85 5.25
444 915 3.711704 TGGGAAGAAGGTCCTATTAGCAG 59.288 47.826 0.00 0.00 37.85 4.24
445 916 3.731431 TGGGAAGAAGGTCCTATTAGCA 58.269 45.455 0.00 0.00 37.85 3.49
446 917 4.984146 ATGGGAAGAAGGTCCTATTAGC 57.016 45.455 0.00 0.00 35.46 3.09
447 918 7.619512 AAGTATGGGAAGAAGGTCCTATTAG 57.380 40.000 0.00 0.00 39.43 1.73
448 919 8.401955 AAAAGTATGGGAAGAAGGTCCTATTA 57.598 34.615 0.00 0.00 39.43 0.98
449 920 6.910259 AAAGTATGGGAAGAAGGTCCTATT 57.090 37.500 0.00 0.00 39.43 1.73
450 921 6.910259 AAAAGTATGGGAAGAAGGTCCTAT 57.090 37.500 0.00 0.00 41.42 2.57
451 922 6.713731 AAAAAGTATGGGAAGAAGGTCCTA 57.286 37.500 0.00 0.00 37.85 2.94
452 923 5.600669 AAAAAGTATGGGAAGAAGGTCCT 57.399 39.130 0.00 0.00 37.85 3.85
477 948 3.052793 TGTGTGGGGAGGTTTCCTAAAAA 60.053 43.478 0.00 0.00 43.49 1.94
478 949 2.514582 TGTGTGGGGAGGTTTCCTAAAA 59.485 45.455 0.00 0.00 43.49 1.52
479 950 2.136863 TGTGTGGGGAGGTTTCCTAAA 58.863 47.619 0.00 0.00 43.49 1.85
480 951 1.822425 TGTGTGGGGAGGTTTCCTAA 58.178 50.000 0.00 0.00 43.49 2.69
481 952 2.053747 ATGTGTGGGGAGGTTTCCTA 57.946 50.000 0.00 0.00 43.49 2.94
482 953 1.158007 AATGTGTGGGGAGGTTTCCT 58.842 50.000 0.00 0.00 43.49 3.36
483 954 2.891191 TAATGTGTGGGGAGGTTTCC 57.109 50.000 0.00 0.00 43.23 3.13
484 955 5.738619 AAAATAATGTGTGGGGAGGTTTC 57.261 39.130 0.00 0.00 0.00 2.78
504 975 7.277539 GTGATGTGTGGAATGTTTTCTCAAAAA 59.722 33.333 0.00 0.00 31.13 1.94
505 976 6.756074 GTGATGTGTGGAATGTTTTCTCAAAA 59.244 34.615 0.00 0.00 32.16 2.44
506 977 6.127507 TGTGATGTGTGGAATGTTTTCTCAAA 60.128 34.615 0.00 0.00 32.16 2.69
507 978 5.359292 TGTGATGTGTGGAATGTTTTCTCAA 59.641 36.000 0.00 0.00 32.16 3.02
508 979 4.886489 TGTGATGTGTGGAATGTTTTCTCA 59.114 37.500 0.00 0.00 32.16 3.27
509 980 5.437289 TGTGATGTGTGGAATGTTTTCTC 57.563 39.130 0.00 0.00 32.16 2.87
510 981 5.279106 CCATGTGATGTGTGGAATGTTTTCT 60.279 40.000 0.00 0.00 34.94 2.52
511 982 4.925054 CCATGTGATGTGTGGAATGTTTTC 59.075 41.667 0.00 0.00 34.94 2.29
512 983 4.800249 GCCATGTGATGTGTGGAATGTTTT 60.800 41.667 0.00 0.00 34.94 2.43
513 984 3.306225 GCCATGTGATGTGTGGAATGTTT 60.306 43.478 0.00 0.00 34.94 2.83
514 985 2.231964 GCCATGTGATGTGTGGAATGTT 59.768 45.455 0.00 0.00 34.94 2.71
515 986 1.820519 GCCATGTGATGTGTGGAATGT 59.179 47.619 0.00 0.00 34.94 2.71
516 987 1.202211 CGCCATGTGATGTGTGGAATG 60.202 52.381 0.00 0.00 34.94 2.67
517 988 1.097232 CGCCATGTGATGTGTGGAAT 58.903 50.000 0.00 0.00 34.94 3.01
518 989 1.585267 GCGCCATGTGATGTGTGGAA 61.585 55.000 0.00 0.00 34.94 3.53
519 990 2.039974 GCGCCATGTGATGTGTGGA 61.040 57.895 0.00 0.00 34.94 4.02
520 991 2.486504 GCGCCATGTGATGTGTGG 59.513 61.111 0.00 0.00 36.09 4.17
521 992 2.486504 GGCGCCATGTGATGTGTG 59.513 61.111 24.80 0.00 0.00 3.82
522 993 1.909459 TAGGGCGCCATGTGATGTGT 61.909 55.000 30.85 1.11 0.00 3.72
523 994 0.535780 ATAGGGCGCCATGTGATGTG 60.536 55.000 30.85 0.00 0.00 3.21
524 995 0.535780 CATAGGGCGCCATGTGATGT 60.536 55.000 30.83 3.64 0.00 3.06
525 996 0.535780 ACATAGGGCGCCATGTGATG 60.536 55.000 38.66 28.32 34.15 3.07
526 997 0.250467 GACATAGGGCGCCATGTGAT 60.250 55.000 38.66 24.54 35.55 3.06
527 998 1.146041 GACATAGGGCGCCATGTGA 59.854 57.895 38.66 15.10 35.55 3.58
528 999 0.747644 TTGACATAGGGCGCCATGTG 60.748 55.000 32.20 32.20 35.55 3.21
529 1000 0.464373 CTTGACATAGGGCGCCATGT 60.464 55.000 27.25 27.25 38.08 3.21
530 1001 0.179048 TCTTGACATAGGGCGCCATG 60.179 55.000 30.85 25.62 0.00 3.66
531 1002 0.179045 GTCTTGACATAGGGCGCCAT 60.179 55.000 30.85 26.24 0.00 4.40
532 1003 1.220749 GTCTTGACATAGGGCGCCA 59.779 57.895 30.85 9.36 0.00 5.69
533 1004 0.392461 TTGTCTTGACATAGGGCGCC 60.392 55.000 21.18 21.18 0.00 6.53
534 1005 1.668419 ATTGTCTTGACATAGGGCGC 58.332 50.000 0.00 0.00 0.00 6.53
535 1006 4.302455 CTCTATTGTCTTGACATAGGGCG 58.698 47.826 4.18 0.00 0.00 6.13
536 1007 4.345257 TCCTCTATTGTCTTGACATAGGGC 59.655 45.833 4.18 0.00 0.00 5.19
537 1008 5.011533 CCTCCTCTATTGTCTTGACATAGGG 59.988 48.000 4.18 8.18 0.00 3.53
538 1009 5.835819 TCCTCCTCTATTGTCTTGACATAGG 59.164 44.000 4.18 9.17 0.00 2.57
539 1010 6.968263 TCCTCCTCTATTGTCTTGACATAG 57.032 41.667 4.18 8.47 0.00 2.23
540 1011 7.126061 TCTTCCTCCTCTATTGTCTTGACATA 58.874 38.462 4.18 0.00 0.00 2.29
541 1012 5.960811 TCTTCCTCCTCTATTGTCTTGACAT 59.039 40.000 4.18 0.00 0.00 3.06
542 1013 5.333581 TCTTCCTCCTCTATTGTCTTGACA 58.666 41.667 0.00 0.00 0.00 3.58
543 1014 5.923733 TCTTCCTCCTCTATTGTCTTGAC 57.076 43.478 0.00 0.00 0.00 3.18
544 1015 6.726299 TCTTTCTTCCTCCTCTATTGTCTTGA 59.274 38.462 0.00 0.00 0.00 3.02
545 1016 6.940739 TCTTTCTTCCTCCTCTATTGTCTTG 58.059 40.000 0.00 0.00 0.00 3.02
546 1017 7.747809 ATCTTTCTTCCTCCTCTATTGTCTT 57.252 36.000 0.00 0.00 0.00 3.01
547 1018 7.563906 CAATCTTTCTTCCTCCTCTATTGTCT 58.436 38.462 0.00 0.00 0.00 3.41
548 1019 6.259829 GCAATCTTTCTTCCTCCTCTATTGTC 59.740 42.308 0.00 0.00 0.00 3.18
549 1020 6.118852 GCAATCTTTCTTCCTCCTCTATTGT 58.881 40.000 0.00 0.00 0.00 2.71
550 1021 5.530543 GGCAATCTTTCTTCCTCCTCTATTG 59.469 44.000 0.00 0.00 0.00 1.90
551 1022 5.192522 TGGCAATCTTTCTTCCTCCTCTATT 59.807 40.000 0.00 0.00 0.00 1.73
552 1023 4.723789 TGGCAATCTTTCTTCCTCCTCTAT 59.276 41.667 0.00 0.00 0.00 1.98
553 1024 4.104086 TGGCAATCTTTCTTCCTCCTCTA 58.896 43.478 0.00 0.00 0.00 2.43
554 1025 2.915604 TGGCAATCTTTCTTCCTCCTCT 59.084 45.455 0.00 0.00 0.00 3.69
555 1026 3.356529 TGGCAATCTTTCTTCCTCCTC 57.643 47.619 0.00 0.00 0.00 3.71
556 1027 3.814504 TTGGCAATCTTTCTTCCTCCT 57.185 42.857 0.00 0.00 0.00 3.69
557 1028 4.524328 TCTTTTGGCAATCTTTCTTCCTCC 59.476 41.667 0.00 0.00 0.00 4.30
558 1029 5.474876 TCTCTTTTGGCAATCTTTCTTCCTC 59.525 40.000 0.00 0.00 0.00 3.71
559 1030 5.388654 TCTCTTTTGGCAATCTTTCTTCCT 58.611 37.500 0.00 0.00 0.00 3.36
560 1031 5.336293 CCTCTCTTTTGGCAATCTTTCTTCC 60.336 44.000 0.00 0.00 0.00 3.46
561 1032 5.474876 TCCTCTCTTTTGGCAATCTTTCTTC 59.525 40.000 0.00 0.00 0.00 2.87
562 1033 5.388654 TCCTCTCTTTTGGCAATCTTTCTT 58.611 37.500 0.00 0.00 0.00 2.52
563 1034 4.990526 TCCTCTCTTTTGGCAATCTTTCT 58.009 39.130 0.00 0.00 0.00 2.52
564 1035 4.157472 CCTCCTCTCTTTTGGCAATCTTTC 59.843 45.833 0.00 0.00 0.00 2.62
565 1036 4.085009 CCTCCTCTCTTTTGGCAATCTTT 58.915 43.478 0.00 0.00 0.00 2.52
566 1037 3.331889 TCCTCCTCTCTTTTGGCAATCTT 59.668 43.478 0.00 0.00 0.00 2.40
567 1038 2.915604 TCCTCCTCTCTTTTGGCAATCT 59.084 45.455 0.00 0.00 0.00 2.40
568 1039 3.356529 TCCTCCTCTCTTTTGGCAATC 57.643 47.619 0.00 0.00 0.00 2.67
569 1040 3.331889 TCTTCCTCCTCTCTTTTGGCAAT 59.668 43.478 0.00 0.00 0.00 3.56
570 1041 2.711009 TCTTCCTCCTCTCTTTTGGCAA 59.289 45.455 0.00 0.00 0.00 4.52
571 1042 2.338809 TCTTCCTCCTCTCTTTTGGCA 58.661 47.619 0.00 0.00 0.00 4.92
572 1043 3.425162 TTCTTCCTCCTCTCTTTTGGC 57.575 47.619 0.00 0.00 0.00 4.52
573 1044 5.234466 TCTTTCTTCCTCCTCTCTTTTGG 57.766 43.478 0.00 0.00 0.00 3.28
574 1045 6.150809 CCAATCTTTCTTCCTCCTCTCTTTTG 59.849 42.308 0.00 0.00 0.00 2.44
575 1046 6.183361 ACCAATCTTTCTTCCTCCTCTCTTTT 60.183 38.462 0.00 0.00 0.00 2.27
576 1047 5.311913 ACCAATCTTTCTTCCTCCTCTCTTT 59.688 40.000 0.00 0.00 0.00 2.52
577 1048 4.849235 ACCAATCTTTCTTCCTCCTCTCTT 59.151 41.667 0.00 0.00 0.00 2.85
578 1049 4.224818 CACCAATCTTTCTTCCTCCTCTCT 59.775 45.833 0.00 0.00 0.00 3.10
579 1050 4.223923 TCACCAATCTTTCTTCCTCCTCTC 59.776 45.833 0.00 0.00 0.00 3.20
580 1051 4.171234 TCACCAATCTTTCTTCCTCCTCT 58.829 43.478 0.00 0.00 0.00 3.69
581 1052 4.559862 TCACCAATCTTTCTTCCTCCTC 57.440 45.455 0.00 0.00 0.00 3.71
582 1053 5.131809 CCTATCACCAATCTTTCTTCCTCCT 59.868 44.000 0.00 0.00 0.00 3.69
583 1054 5.372373 CCTATCACCAATCTTTCTTCCTCC 58.628 45.833 0.00 0.00 0.00 4.30
584 1055 5.372373 CCCTATCACCAATCTTTCTTCCTC 58.628 45.833 0.00 0.00 0.00 3.71
585 1056 4.385754 GCCCTATCACCAATCTTTCTTCCT 60.386 45.833 0.00 0.00 0.00 3.36
586 1057 3.885901 GCCCTATCACCAATCTTTCTTCC 59.114 47.826 0.00 0.00 0.00 3.46
587 1058 3.885901 GGCCCTATCACCAATCTTTCTTC 59.114 47.826 0.00 0.00 0.00 2.87
588 1059 3.529319 AGGCCCTATCACCAATCTTTCTT 59.471 43.478 0.00 0.00 0.00 2.52
589 1060 3.126453 AGGCCCTATCACCAATCTTTCT 58.874 45.455 0.00 0.00 0.00 2.52
590 1061 3.584733 AGGCCCTATCACCAATCTTTC 57.415 47.619 0.00 0.00 0.00 2.62
591 1062 4.337264 AAAGGCCCTATCACCAATCTTT 57.663 40.909 0.00 0.00 0.00 2.52
592 1063 4.017130 AGAAAAGGCCCTATCACCAATCTT 60.017 41.667 0.00 0.00 0.00 2.40
593 1064 3.529319 AGAAAAGGCCCTATCACCAATCT 59.471 43.478 0.00 0.00 0.00 2.40
594 1065 3.903467 AGAAAAGGCCCTATCACCAATC 58.097 45.455 0.00 0.00 0.00 2.67
595 1066 5.466127 TTAGAAAAGGCCCTATCACCAAT 57.534 39.130 0.00 0.00 0.00 3.16
596 1067 4.938575 TTAGAAAAGGCCCTATCACCAA 57.061 40.909 0.00 0.00 0.00 3.67
597 1068 4.444306 CGATTAGAAAAGGCCCTATCACCA 60.444 45.833 0.00 0.00 0.00 4.17
598 1069 4.065789 CGATTAGAAAAGGCCCTATCACC 58.934 47.826 0.00 0.00 0.00 4.02
599 1070 4.750598 GTCGATTAGAAAAGGCCCTATCAC 59.249 45.833 0.00 0.00 0.00 3.06
600 1071 4.407621 TGTCGATTAGAAAAGGCCCTATCA 59.592 41.667 0.00 0.00 0.00 2.15
601 1072 4.957296 TGTCGATTAGAAAAGGCCCTATC 58.043 43.478 0.00 0.00 0.00 2.08
602 1073 4.654262 TCTGTCGATTAGAAAAGGCCCTAT 59.346 41.667 0.00 0.00 0.00 2.57
603 1074 4.028131 TCTGTCGATTAGAAAAGGCCCTA 58.972 43.478 0.00 0.00 0.00 3.53
604 1075 2.838202 TCTGTCGATTAGAAAAGGCCCT 59.162 45.455 0.00 0.00 0.00 5.19
605 1076 3.261981 TCTGTCGATTAGAAAAGGCCC 57.738 47.619 0.00 0.00 0.00 5.80
606 1077 4.035675 CCAATCTGTCGATTAGAAAAGGCC 59.964 45.833 0.00 0.00 37.77 5.19
607 1078 4.035675 CCCAATCTGTCGATTAGAAAAGGC 59.964 45.833 6.46 0.00 37.77 4.35
608 1079 4.035675 GCCCAATCTGTCGATTAGAAAAGG 59.964 45.833 6.46 8.05 37.77 3.11
609 1080 4.878397 AGCCCAATCTGTCGATTAGAAAAG 59.122 41.667 6.46 1.22 37.77 2.27
615 1086 1.140852 CCCAGCCCAATCTGTCGATTA 59.859 52.381 0.00 0.00 37.77 1.75
616 1087 0.107017 CCCAGCCCAATCTGTCGATT 60.107 55.000 0.00 0.00 40.43 3.34
621 1092 2.357836 CAGCCCAGCCCAATCTGT 59.642 61.111 0.00 0.00 32.32 3.41
635 1106 3.464494 GCCCATTCCAAGCCCAGC 61.464 66.667 0.00 0.00 0.00 4.85
636 1107 2.056223 CAGCCCATTCCAAGCCCAG 61.056 63.158 0.00 0.00 0.00 4.45
647 1118 1.075374 TGAACTAAAGGTGCAGCCCAT 59.925 47.619 13.29 1.34 38.26 4.00
674 1145 0.032815 GGGGAGCTGAGATAGTTCGC 59.967 60.000 0.00 0.00 45.05 4.70
675 1146 0.676736 GGGGGAGCTGAGATAGTTCG 59.323 60.000 0.00 0.00 37.50 3.95
691 1162 1.687493 GGACTGAGGAGTGAGGGGG 60.687 68.421 0.00 0.00 30.16 5.40
693 1164 1.687493 GGGGACTGAGGAGTGAGGG 60.687 68.421 0.00 0.00 30.16 4.30
724 1220 4.074526 GACCGCCAGCTGCTGAGA 62.075 66.667 30.10 0.00 38.05 3.27
736 1232 1.005394 TTTCTGTCCTTCCGACCGC 60.005 57.895 0.00 0.00 41.18 5.68
738 1234 0.036294 CCCTTTCTGTCCTTCCGACC 60.036 60.000 0.00 0.00 41.18 4.79
739 1235 0.036294 CCCCTTTCTGTCCTTCCGAC 60.036 60.000 0.00 0.00 42.33 4.79
740 1236 1.198759 CCCCCTTTCTGTCCTTCCGA 61.199 60.000 0.00 0.00 0.00 4.55
741 1237 1.198759 TCCCCCTTTCTGTCCTTCCG 61.199 60.000 0.00 0.00 0.00 4.30
742 1238 0.621082 CTCCCCCTTTCTGTCCTTCC 59.379 60.000 0.00 0.00 0.00 3.46
743 1239 0.034960 GCTCCCCCTTTCTGTCCTTC 60.035 60.000 0.00 0.00 0.00 3.46
744 1240 1.842381 CGCTCCCCCTTTCTGTCCTT 61.842 60.000 0.00 0.00 0.00 3.36
745 1241 2.294078 CGCTCCCCCTTTCTGTCCT 61.294 63.158 0.00 0.00 0.00 3.85
750 1246 3.403558 GCTCCGCTCCCCCTTTCT 61.404 66.667 0.00 0.00 0.00 2.52
815 1313 1.576920 CTGACCTCGATCGGATCCG 59.423 63.158 28.62 28.62 41.35 4.18
816 1314 1.287503 GCTGACCTCGATCGGATCC 59.712 63.158 16.41 0.00 0.00 3.36
819 1317 2.833582 GGGCTGACCTCGATCGGA 60.834 66.667 16.41 1.00 35.85 4.55
831 1329 2.203549 GAAGGAGAAGGGGTGGGCTG 62.204 65.000 0.00 0.00 0.00 4.85
843 1341 0.684805 GGAGAAGGAGCGGAAGGAGA 60.685 60.000 0.00 0.00 0.00 3.71
849 1347 2.454336 TTAGATGGAGAAGGAGCGGA 57.546 50.000 0.00 0.00 0.00 5.54
851 1349 4.764823 AGTAGATTAGATGGAGAAGGAGCG 59.235 45.833 0.00 0.00 0.00 5.03
852 1350 5.185056 GGAGTAGATTAGATGGAGAAGGAGC 59.815 48.000 0.00 0.00 0.00 4.70
855 1353 6.377146 GCTAGGAGTAGATTAGATGGAGAAGG 59.623 46.154 0.00 0.00 0.00 3.46
856 1354 7.175104 AGCTAGGAGTAGATTAGATGGAGAAG 58.825 42.308 0.00 0.00 0.00 2.85
858 1356 6.712114 AGCTAGGAGTAGATTAGATGGAGA 57.288 41.667 0.00 0.00 0.00 3.71
860 1358 8.056400 GGAATAGCTAGGAGTAGATTAGATGGA 58.944 40.741 0.00 0.00 0.00 3.41
861 1359 8.058847 AGGAATAGCTAGGAGTAGATTAGATGG 58.941 40.741 0.00 0.00 0.00 3.51
862 1360 8.902806 CAGGAATAGCTAGGAGTAGATTAGATG 58.097 40.741 0.00 0.00 0.00 2.90
863 1361 8.620177 ACAGGAATAGCTAGGAGTAGATTAGAT 58.380 37.037 0.00 0.00 0.00 1.98
864 1362 7.991174 ACAGGAATAGCTAGGAGTAGATTAGA 58.009 38.462 0.00 0.00 0.00 2.10
865 1363 8.644374 AACAGGAATAGCTAGGAGTAGATTAG 57.356 38.462 0.00 0.00 0.00 1.73
867 1365 7.787424 AGAAACAGGAATAGCTAGGAGTAGATT 59.213 37.037 0.00 0.00 0.00 2.40
868 1366 7.302184 AGAAACAGGAATAGCTAGGAGTAGAT 58.698 38.462 0.00 0.00 0.00 1.98
870 1368 6.969993 AGAAACAGGAATAGCTAGGAGTAG 57.030 41.667 0.00 0.00 0.00 2.57
872 1370 6.628644 AAAGAAACAGGAATAGCTAGGAGT 57.371 37.500 0.00 0.00 0.00 3.85
878 1376 5.998363 ACGAAGAAAAGAAACAGGAATAGCT 59.002 36.000 0.00 0.00 0.00 3.32
879 1377 6.242508 ACGAAGAAAAGAAACAGGAATAGC 57.757 37.500 0.00 0.00 0.00 2.97
884 1382 8.132995 GGAAAAATACGAAGAAAAGAAACAGGA 58.867 33.333 0.00 0.00 0.00 3.86
885 1383 7.381408 GGGAAAAATACGAAGAAAAGAAACAGG 59.619 37.037 0.00 0.00 0.00 4.00
886 1384 7.381408 GGGGAAAAATACGAAGAAAAGAAACAG 59.619 37.037 0.00 0.00 0.00 3.16
888 1386 6.643770 GGGGGAAAAATACGAAGAAAAGAAAC 59.356 38.462 0.00 0.00 0.00 2.78
889 1387 6.551975 AGGGGGAAAAATACGAAGAAAAGAAA 59.448 34.615 0.00 0.00 0.00 2.52
890 1388 6.072649 AGGGGGAAAAATACGAAGAAAAGAA 58.927 36.000 0.00 0.00 0.00 2.52
891 1389 5.637127 AGGGGGAAAAATACGAAGAAAAGA 58.363 37.500 0.00 0.00 0.00 2.52
893 1391 4.768448 GGAGGGGGAAAAATACGAAGAAAA 59.232 41.667 0.00 0.00 0.00 2.29
894 1392 4.043686 AGGAGGGGGAAAAATACGAAGAAA 59.956 41.667 0.00 0.00 0.00 2.52
895 1393 3.590182 AGGAGGGGGAAAAATACGAAGAA 59.410 43.478 0.00 0.00 0.00 2.52
896 1394 3.187112 AGGAGGGGGAAAAATACGAAGA 58.813 45.455 0.00 0.00 0.00 2.87
897 1395 3.646736 AGGAGGGGGAAAAATACGAAG 57.353 47.619 0.00 0.00 0.00 3.79
898 1396 3.118149 GCTAGGAGGGGGAAAAATACGAA 60.118 47.826 0.00 0.00 0.00 3.85
899 1397 2.436911 GCTAGGAGGGGGAAAAATACGA 59.563 50.000 0.00 0.00 0.00 3.43
900 1398 2.171870 TGCTAGGAGGGGGAAAAATACG 59.828 50.000 0.00 0.00 0.00 3.06
901 1399 3.458487 TCTGCTAGGAGGGGGAAAAATAC 59.542 47.826 11.76 0.00 0.00 1.89
902 1400 3.743132 TCTGCTAGGAGGGGGAAAAATA 58.257 45.455 11.76 0.00 0.00 1.40
903 1401 2.573463 TCTGCTAGGAGGGGGAAAAAT 58.427 47.619 11.76 0.00 0.00 1.82
904 1402 2.053747 TCTGCTAGGAGGGGGAAAAA 57.946 50.000 11.76 0.00 0.00 1.94
905 1403 2.053747 TTCTGCTAGGAGGGGGAAAA 57.946 50.000 11.76 0.00 0.00 2.29
906 1404 2.041216 GTTTTCTGCTAGGAGGGGGAAA 59.959 50.000 11.76 1.98 0.00 3.13
907 1405 1.633945 GTTTTCTGCTAGGAGGGGGAA 59.366 52.381 11.76 0.00 0.00 3.97
908 1406 1.286248 GTTTTCTGCTAGGAGGGGGA 58.714 55.000 11.76 0.00 0.00 4.81
909 1407 0.256177 GGTTTTCTGCTAGGAGGGGG 59.744 60.000 11.76 0.00 0.00 5.40
910 1408 0.256177 GGGTTTTCTGCTAGGAGGGG 59.744 60.000 11.76 0.00 0.00 4.79
911 1409 1.290134 AGGGTTTTCTGCTAGGAGGG 58.710 55.000 11.76 0.00 0.00 4.30
912 1410 2.158885 GCTAGGGTTTTCTGCTAGGAGG 60.159 54.545 11.76 0.00 0.00 4.30
913 1411 2.158885 GGCTAGGGTTTTCTGCTAGGAG 60.159 54.545 4.60 4.60 0.00 3.69
914 1412 1.838077 GGCTAGGGTTTTCTGCTAGGA 59.162 52.381 0.00 0.00 0.00 2.94
915 1413 1.559682 TGGCTAGGGTTTTCTGCTAGG 59.440 52.381 0.00 0.00 0.00 3.02
916 1414 2.501723 TCTGGCTAGGGTTTTCTGCTAG 59.498 50.000 0.00 0.00 34.32 3.42
917 1415 2.546899 TCTGGCTAGGGTTTTCTGCTA 58.453 47.619 0.00 0.00 0.00 3.49
918 1416 1.362224 TCTGGCTAGGGTTTTCTGCT 58.638 50.000 0.00 0.00 0.00 4.24
919 1417 2.426842 ATCTGGCTAGGGTTTTCTGC 57.573 50.000 0.00 0.00 0.00 4.26
920 1418 3.696548 GGAAATCTGGCTAGGGTTTTCTG 59.303 47.826 15.26 0.00 0.00 3.02
921 1419 3.309193 GGGAAATCTGGCTAGGGTTTTCT 60.309 47.826 15.26 0.00 0.00 2.52
922 1420 3.024547 GGGAAATCTGGCTAGGGTTTTC 58.975 50.000 0.00 5.09 0.00 2.29
923 1421 2.292257 GGGGAAATCTGGCTAGGGTTTT 60.292 50.000 0.00 0.00 0.00 2.43
937 1435 2.561984 GGGTTTGATTGGGAGGGGAAAT 60.562 50.000 0.00 0.00 0.00 2.17
938 1436 1.203250 GGGTTTGATTGGGAGGGGAAA 60.203 52.381 0.00 0.00 0.00 3.13
939 1437 0.411848 GGGTTTGATTGGGAGGGGAA 59.588 55.000 0.00 0.00 0.00 3.97
940 1438 0.479589 AGGGTTTGATTGGGAGGGGA 60.480 55.000 0.00 0.00 0.00 4.81
941 1439 1.304891 TAGGGTTTGATTGGGAGGGG 58.695 55.000 0.00 0.00 0.00 4.79
942 1440 2.042433 TGTTAGGGTTTGATTGGGAGGG 59.958 50.000 0.00 0.00 0.00 4.30
948 1452 4.402474 GGGAGGAATGTTAGGGTTTGATTG 59.598 45.833 0.00 0.00 0.00 2.67
949 1453 4.572007 GGGGAGGAATGTTAGGGTTTGATT 60.572 45.833 0.00 0.00 0.00 2.57
953 1457 1.644337 GGGGGAGGAATGTTAGGGTTT 59.356 52.381 0.00 0.00 0.00 3.27
982 1486 0.469144 ATCTCCTTCCTCTCTCCGCC 60.469 60.000 0.00 0.00 0.00 6.13
985 1489 1.047801 GCCATCTCCTTCCTCTCTCC 58.952 60.000 0.00 0.00 0.00 3.71
986 1490 0.673437 CGCCATCTCCTTCCTCTCTC 59.327 60.000 0.00 0.00 0.00 3.20
987 1491 1.398958 GCGCCATCTCCTTCCTCTCT 61.399 60.000 0.00 0.00 0.00 3.10
993 1498 2.178890 CAGCAGCGCCATCTCCTTC 61.179 63.158 2.29 0.00 0.00 3.46
994 1499 1.980784 ATCAGCAGCGCCATCTCCTT 61.981 55.000 2.29 0.00 0.00 3.36
1001 1506 4.783621 GGTCCATCAGCAGCGCCA 62.784 66.667 2.29 0.00 0.00 5.69
1073 1581 2.733227 GCGATGTGCAAAATGAAGAGGG 60.733 50.000 0.00 0.00 45.45 4.30
1074 1582 2.523015 GCGATGTGCAAAATGAAGAGG 58.477 47.619 0.00 0.00 45.45 3.69
1086 1594 2.126734 GCAAGTGGTGCGATGTGC 60.127 61.111 0.00 0.00 45.10 4.57
1094 1602 0.599991 TACGCACAGAGCAAGTGGTG 60.600 55.000 5.54 0.00 46.13 4.17
1095 1603 0.321671 ATACGCACAGAGCAAGTGGT 59.678 50.000 5.54 4.68 46.13 4.16
1096 1604 0.723414 CATACGCACAGAGCAAGTGG 59.277 55.000 5.54 0.00 46.13 4.00
1097 1605 1.127397 CACATACGCACAGAGCAAGTG 59.873 52.381 0.00 0.00 46.13 3.16
1098 1606 1.000843 TCACATACGCACAGAGCAAGT 59.999 47.619 0.00 0.00 46.13 3.16
1099 1607 1.713597 TCACATACGCACAGAGCAAG 58.286 50.000 0.00 0.00 46.13 4.01
1100 1608 2.068519 CTTCACATACGCACAGAGCAA 58.931 47.619 0.00 0.00 46.13 3.91
1101 1609 1.713597 CTTCACATACGCACAGAGCA 58.286 50.000 0.00 0.00 46.13 4.26
1102 1610 0.371645 GCTTCACATACGCACAGAGC 59.628 55.000 0.00 0.00 40.87 4.09
1103 1611 0.642291 CGCTTCACATACGCACAGAG 59.358 55.000 0.00 0.00 0.00 3.35
1104 1612 0.735978 CCGCTTCACATACGCACAGA 60.736 55.000 0.00 0.00 0.00 3.41
1105 1613 1.014044 ACCGCTTCACATACGCACAG 61.014 55.000 0.00 0.00 0.00 3.66
1106 1614 0.601576 AACCGCTTCACATACGCACA 60.602 50.000 0.00 0.00 0.00 4.57
1107 1615 0.179225 CAACCGCTTCACATACGCAC 60.179 55.000 0.00 0.00 0.00 5.34
1108 1616 0.319986 TCAACCGCTTCACATACGCA 60.320 50.000 0.00 0.00 0.00 5.24
1109 1617 0.370273 CTCAACCGCTTCACATACGC 59.630 55.000 0.00 0.00 0.00 4.42
1110 1618 0.999406 CCTCAACCGCTTCACATACG 59.001 55.000 0.00 0.00 0.00 3.06
1111 1619 1.369625 CCCTCAACCGCTTCACATAC 58.630 55.000 0.00 0.00 0.00 2.39
1112 1620 0.392461 GCCCTCAACCGCTTCACATA 60.392 55.000 0.00 0.00 0.00 2.29
1113 1621 1.675641 GCCCTCAACCGCTTCACAT 60.676 57.895 0.00 0.00 0.00 3.21
1114 1622 2.281484 GCCCTCAACCGCTTCACA 60.281 61.111 0.00 0.00 0.00 3.58
1115 1623 2.032681 AGCCCTCAACCGCTTCAC 59.967 61.111 0.00 0.00 28.56 3.18
1116 1624 2.032528 CAGCCCTCAACCGCTTCA 59.967 61.111 0.00 0.00 31.40 3.02
1117 1625 1.743252 CTCAGCCCTCAACCGCTTC 60.743 63.158 0.00 0.00 31.40 3.86
1118 1626 2.177594 CTCTCAGCCCTCAACCGCTT 62.178 60.000 0.00 0.00 31.40 4.68
1119 1627 2.604686 TCTCAGCCCTCAACCGCT 60.605 61.111 0.00 0.00 35.10 5.52
1120 1628 2.125350 CTCTCAGCCCTCAACCGC 60.125 66.667 0.00 0.00 0.00 5.68
1121 1629 2.125350 GCTCTCAGCCCTCAACCG 60.125 66.667 0.00 0.00 34.48 4.44
1122 1630 1.220477 GAGCTCTCAGCCCTCAACC 59.780 63.158 6.43 0.00 43.77 3.77
1123 1631 0.175531 GAGAGCTCTCAGCCCTCAAC 59.824 60.000 33.99 7.39 44.36 3.18
1124 1632 0.975040 GGAGAGCTCTCAGCCCTCAA 60.975 60.000 37.67 0.00 46.43 3.02
1125 1633 1.381056 GGAGAGCTCTCAGCCCTCA 60.381 63.158 37.67 0.00 46.43 3.86
1126 1634 1.076044 AGGAGAGCTCTCAGCCCTC 60.076 63.158 37.67 22.71 44.25 4.30
1127 1635 1.076044 GAGGAGAGCTCTCAGCCCT 60.076 63.158 37.67 28.65 43.77 5.19
1128 1636 0.687427 AAGAGGAGAGCTCTCAGCCC 60.687 60.000 37.67 24.85 43.77 5.19
1129 1637 1.681264 GTAAGAGGAGAGCTCTCAGCC 59.319 57.143 37.67 25.19 43.77 4.85
1130 1638 2.618709 GAGTAAGAGGAGAGCTCTCAGC 59.381 54.545 37.67 28.99 44.60 4.26
1131 1639 4.156455 AGAGTAAGAGGAGAGCTCTCAG 57.844 50.000 37.67 0.00 44.60 3.35
1132 1640 4.263727 ACAAGAGTAAGAGGAGAGCTCTCA 60.264 45.833 37.67 19.49 44.60 3.27
1133 1641 4.096382 CACAAGAGTAAGAGGAGAGCTCTC 59.904 50.000 31.89 31.89 42.14 3.20
1134 1642 4.016444 CACAAGAGTAAGAGGAGAGCTCT 58.984 47.826 18.28 18.28 38.06 4.09
1135 1643 3.761752 ACACAAGAGTAAGAGGAGAGCTC 59.238 47.826 5.27 5.27 0.00 4.09
1136 1644 3.773560 ACACAAGAGTAAGAGGAGAGCT 58.226 45.455 0.00 0.00 0.00 4.09
1137 1645 5.504994 CGATACACAAGAGTAAGAGGAGAGC 60.505 48.000 0.00 0.00 0.00 4.09
1138 1646 5.587043 ACGATACACAAGAGTAAGAGGAGAG 59.413 44.000 0.00 0.00 0.00 3.20
1139 1647 5.498393 ACGATACACAAGAGTAAGAGGAGA 58.502 41.667 0.00 0.00 0.00 3.71
1140 1648 5.220892 GGACGATACACAAGAGTAAGAGGAG 60.221 48.000 0.00 0.00 0.00 3.69
1141 1649 4.639310 GGACGATACACAAGAGTAAGAGGA 59.361 45.833 0.00 0.00 0.00 3.71
1142 1650 4.398358 TGGACGATACACAAGAGTAAGAGG 59.602 45.833 0.00 0.00 0.00 3.69
1143 1651 5.562506 TGGACGATACACAAGAGTAAGAG 57.437 43.478 0.00 0.00 0.00 2.85
1144 1652 5.708697 TCTTGGACGATACACAAGAGTAAGA 59.291 40.000 0.00 0.00 43.90 2.10
1145 1653 5.950883 TCTTGGACGATACACAAGAGTAAG 58.049 41.667 0.00 0.00 43.90 2.34
1146 1654 5.970317 TCTTGGACGATACACAAGAGTAA 57.030 39.130 0.00 0.00 43.90 2.24
1151 1659 3.553511 GCTGATCTTGGACGATACACAAG 59.446 47.826 0.00 0.00 42.14 3.16
1152 1660 3.056179 TGCTGATCTTGGACGATACACAA 60.056 43.478 0.00 0.00 0.00 3.33
1153 1661 2.495669 TGCTGATCTTGGACGATACACA 59.504 45.455 0.00 0.00 0.00 3.72
1154 1662 3.119291 CTGCTGATCTTGGACGATACAC 58.881 50.000 0.00 0.00 0.00 2.90
1155 1663 3.023832 TCTGCTGATCTTGGACGATACA 58.976 45.455 0.00 0.00 0.00 2.29
1156 1664 3.181486 TGTCTGCTGATCTTGGACGATAC 60.181 47.826 0.00 0.00 0.00 2.24
1157 1665 3.023832 TGTCTGCTGATCTTGGACGATA 58.976 45.455 0.00 0.00 0.00 2.92
1158 1666 1.827344 TGTCTGCTGATCTTGGACGAT 59.173 47.619 0.00 0.00 0.00 3.73
1159 1667 1.256812 TGTCTGCTGATCTTGGACGA 58.743 50.000 0.00 0.00 0.00 4.20
1160 1668 2.306341 ATGTCTGCTGATCTTGGACG 57.694 50.000 0.00 0.00 0.00 4.79
1161 1669 2.681848 CCAATGTCTGCTGATCTTGGAC 59.318 50.000 22.16 2.16 38.12 4.02
1162 1670 2.306805 ACCAATGTCTGCTGATCTTGGA 59.693 45.455 28.28 0.00 38.12 3.53
1163 1671 2.681848 GACCAATGTCTGCTGATCTTGG 59.318 50.000 23.67 23.67 39.96 3.61
1164 1672 3.340928 TGACCAATGTCTGCTGATCTTG 58.659 45.455 0.00 4.16 42.28 3.02
1165 1673 3.708403 TGACCAATGTCTGCTGATCTT 57.292 42.857 0.00 0.00 42.28 2.40
1166 1674 3.708403 TTGACCAATGTCTGCTGATCT 57.292 42.857 0.00 0.00 42.28 2.75
1167 1675 4.978083 AATTGACCAATGTCTGCTGATC 57.022 40.909 0.00 0.00 42.28 2.92
1168 1676 4.619863 GCAAATTGACCAATGTCTGCTGAT 60.620 41.667 0.00 0.00 42.28 2.90
1169 1677 3.305539 GCAAATTGACCAATGTCTGCTGA 60.306 43.478 0.00 0.00 42.28 4.26
1170 1678 2.991190 GCAAATTGACCAATGTCTGCTG 59.009 45.455 0.00 0.00 42.28 4.41
1171 1679 2.352030 CGCAAATTGACCAATGTCTGCT 60.352 45.455 16.02 0.00 42.28 4.24
1172 1680 1.987770 CGCAAATTGACCAATGTCTGC 59.012 47.619 0.00 11.54 42.28 4.26
1173 1681 2.981805 CACGCAAATTGACCAATGTCTG 59.018 45.455 0.00 0.00 42.28 3.51
1174 1682 2.607771 GCACGCAAATTGACCAATGTCT 60.608 45.455 0.00 0.00 42.28 3.41
1175 1683 1.720852 GCACGCAAATTGACCAATGTC 59.279 47.619 0.00 0.00 42.12 3.06
1176 1684 1.605202 GGCACGCAAATTGACCAATGT 60.605 47.619 0.00 0.00 0.00 2.71
1177 1685 1.070038 GGCACGCAAATTGACCAATG 58.930 50.000 0.00 0.00 0.00 2.82
1178 1686 0.968405 AGGCACGCAAATTGACCAAT 59.032 45.000 0.00 0.00 0.00 3.16
1179 1687 0.031857 CAGGCACGCAAATTGACCAA 59.968 50.000 0.00 0.00 0.00 3.67
1180 1688 0.821301 TCAGGCACGCAAATTGACCA 60.821 50.000 0.00 0.00 0.00 4.02
1181 1689 0.527565 ATCAGGCACGCAAATTGACC 59.472 50.000 0.00 0.00 0.00 4.02
1182 1690 1.199789 TGATCAGGCACGCAAATTGAC 59.800 47.619 0.00 0.00 0.00 3.18
1208 1716 1.376424 AAGCACCTCGCATCACAGG 60.376 57.895 0.00 0.00 46.13 4.00
1210 1718 2.327343 GCAAGCACCTCGCATCACA 61.327 57.895 0.00 0.00 46.13 3.58
1211 1719 2.482374 GCAAGCACCTCGCATCAC 59.518 61.111 0.00 0.00 46.13 3.06
1212 1720 3.120385 CGCAAGCACCTCGCATCA 61.120 61.111 0.00 0.00 46.13 3.07
1215 1723 3.807631 AACTCGCAAGCACCTCGCA 62.808 57.895 0.00 0.00 46.13 5.10
1216 1724 3.044305 AACTCGCAAGCACCTCGC 61.044 61.111 0.00 0.00 42.91 5.03
1217 1725 2.856032 CAACTCGCAAGCACCTCG 59.144 61.111 0.00 0.00 37.18 4.63
1228 1736 1.308069 CCCATCCACCTTGCAACTCG 61.308 60.000 0.00 0.00 0.00 4.18
1229 1737 1.598701 GCCCATCCACCTTGCAACTC 61.599 60.000 0.00 0.00 0.00 3.01
1230 1738 1.607467 GCCCATCCACCTTGCAACT 60.607 57.895 0.00 0.00 0.00 3.16
1231 1739 1.470996 TTGCCCATCCACCTTGCAAC 61.471 55.000 0.00 0.00 37.04 4.17
1235 1743 0.682209 CCTCTTGCCCATCCACCTTG 60.682 60.000 0.00 0.00 0.00 3.61
1236 1744 1.693640 CCTCTTGCCCATCCACCTT 59.306 57.895 0.00 0.00 0.00 3.50
1247 1766 1.153269 GGAGCCTACTGCCTCTTGC 60.153 63.158 0.00 0.00 42.71 4.01
1248 1767 1.142748 CGGAGCCTACTGCCTCTTG 59.857 63.158 0.00 0.00 42.71 3.02
1253 1772 4.840005 GTGCCGGAGCCTACTGCC 62.840 72.222 5.05 0.00 42.71 4.85
1259 1778 0.605589 GTGTAAAAGTGCCGGAGCCT 60.606 55.000 5.05 0.00 38.69 4.58
1276 1795 4.786609 GCAAGACTTGAGAAAGAAACCGTG 60.787 45.833 19.51 0.00 0.00 4.94
1277 1796 3.312697 GCAAGACTTGAGAAAGAAACCGT 59.687 43.478 19.51 0.00 0.00 4.83
1279 1798 5.760743 ACTAGCAAGACTTGAGAAAGAAACC 59.239 40.000 19.51 0.00 0.00 3.27
1288 1807 6.039616 GGTTAGATCACTAGCAAGACTTGAG 58.960 44.000 19.51 10.51 32.67 3.02
1291 1810 6.613153 AAGGTTAGATCACTAGCAAGACTT 57.387 37.500 0.00 0.00 32.67 3.01
1292 1811 5.163602 CGAAGGTTAGATCACTAGCAAGACT 60.164 44.000 0.00 0.00 32.67 3.24
1325 1844 0.515127 TGCACGTGGTTATGCGAAAG 59.485 50.000 18.88 0.00 45.13 2.62
1327 1846 1.906994 GCTGCACGTGGTTATGCGAA 61.907 55.000 18.88 0.00 45.13 4.70
1328 1847 2.387445 GCTGCACGTGGTTATGCGA 61.387 57.895 18.88 0.00 45.13 5.10
1329 1848 2.098298 GCTGCACGTGGTTATGCG 59.902 61.111 18.88 0.00 45.13 4.73
1332 1851 2.390599 CGCTGCTGCACGTGGTTAT 61.391 57.895 18.88 0.00 39.64 1.89
1333 1852 3.041351 CGCTGCTGCACGTGGTTA 61.041 61.111 18.88 0.00 39.64 2.85
1344 1863 3.997064 GACATCGTCTGCCGCTGCT 62.997 63.158 0.70 0.00 36.17 4.24
1349 1868 1.078759 GGTTGAGACATCGTCTGCCG 61.079 60.000 0.44 0.00 43.53 5.69
1353 1872 4.248859 CAATGAAGGTTGAGACATCGTCT 58.751 43.478 0.00 0.00 46.42 4.18
1364 1883 1.341080 AACCCCAGCAATGAAGGTTG 58.659 50.000 0.00 0.00 39.32 3.77
1371 1890 1.823169 AAGCAGCAACCCCAGCAATG 61.823 55.000 0.00 0.00 0.00 2.82
1372 1891 1.534717 AAGCAGCAACCCCAGCAAT 60.535 52.632 0.00 0.00 0.00 3.56
1373 1892 2.123338 AAGCAGCAACCCCAGCAA 60.123 55.556 0.00 0.00 0.00 3.91
1375 1894 4.368543 GCAAGCAGCAACCCCAGC 62.369 66.667 0.00 0.00 44.79 4.85
1407 1929 6.738114 TGGAAAAACATCAGAGTTGCTAAAG 58.262 36.000 0.00 0.00 0.00 1.85
1408 1930 6.321181 ACTGGAAAAACATCAGAGTTGCTAAA 59.679 34.615 0.00 0.00 33.19 1.85
1409 1931 5.827797 ACTGGAAAAACATCAGAGTTGCTAA 59.172 36.000 0.00 0.00 33.19 3.09
1411 1933 4.210331 ACTGGAAAAACATCAGAGTTGCT 58.790 39.130 0.00 0.00 33.19 3.91
1412 1934 4.574599 ACTGGAAAAACATCAGAGTTGC 57.425 40.909 0.00 0.00 33.19 4.17
1413 1935 8.103948 AGATTACTGGAAAAACATCAGAGTTG 57.896 34.615 0.00 0.00 33.19 3.16
1414 1936 7.939039 TGAGATTACTGGAAAAACATCAGAGTT 59.061 33.333 0.00 0.00 33.19 3.01
1415 1937 7.453393 TGAGATTACTGGAAAAACATCAGAGT 58.547 34.615 0.00 0.00 33.19 3.24
1420 1942 8.498054 TCAGATGAGATTACTGGAAAAACATC 57.502 34.615 0.00 0.00 34.01 3.06
1421 1943 8.868522 TTCAGATGAGATTACTGGAAAAACAT 57.131 30.769 0.00 0.00 33.19 2.71
1429 1951 6.766944 AGATGCTTTTCAGATGAGATTACTGG 59.233 38.462 0.00 0.00 33.19 4.00
1430 1952 7.041916 GGAGATGCTTTTCAGATGAGATTACTG 60.042 40.741 0.00 0.00 0.00 2.74
1436 1958 4.767478 CAGGAGATGCTTTTCAGATGAGA 58.233 43.478 0.00 0.00 0.00 3.27
1456 1978 2.096069 CAGACACCGAAACATGAAGCAG 60.096 50.000 0.00 0.00 0.00 4.24
1462 1984 3.861840 AGTATCCAGACACCGAAACATG 58.138 45.455 0.00 0.00 0.00 3.21
1502 2024 6.183360 GCAGTAAAACATTCTTAGCATTGTGC 60.183 38.462 0.00 0.00 45.46 4.57
1504 2026 6.209391 AGGCAGTAAAACATTCTTAGCATTGT 59.791 34.615 0.00 0.00 0.00 2.71
1512 2034 7.676947 TCTACACTAGGCAGTAAAACATTCTT 58.323 34.615 0.00 0.00 32.21 2.52
1513 2035 7.178628 TCTCTACACTAGGCAGTAAAACATTCT 59.821 37.037 0.00 0.00 32.21 2.40
1514 2036 7.321153 TCTCTACACTAGGCAGTAAAACATTC 58.679 38.462 0.00 0.00 32.21 2.67
1516 2038 6.852420 TCTCTACACTAGGCAGTAAAACAT 57.148 37.500 0.00 0.00 32.21 2.71
1531 2065 0.866483 GCTAGGCGCGTTCTCTACAC 60.866 60.000 8.36 0.00 0.00 2.90
1575 2109 9.150348 CCAAAACACTGAAAACATTCTTAGTTT 57.850 29.630 0.00 0.00 40.66 2.66
1759 2319 1.366854 GAAAGAACATCGGGCGGGAC 61.367 60.000 0.00 0.00 0.00 4.46
1767 2327 4.977963 ACTGCACAAAATGAAAGAACATCG 59.022 37.500 0.00 0.00 0.00 3.84
1796 2365 2.666619 GCATTGCACACACAGAGTAAGC 60.667 50.000 3.15 0.00 0.00 3.09
1803 2372 1.372499 GCCAGCATTGCACACACAG 60.372 57.895 11.91 0.00 0.00 3.66
1807 2376 4.424566 CCGGCCAGCATTGCACAC 62.425 66.667 11.91 0.00 0.00 3.82
1809 2378 3.142838 ATCCGGCCAGCATTGCAC 61.143 61.111 11.91 0.00 0.00 4.57
1822 2391 3.928992 GCAGACATATGTACATCCATCCG 59.071 47.826 12.68 2.20 0.00 4.18
1856 2425 7.823665 TCAATCTTCTGGTTTCTGAAATGATG 58.176 34.615 6.06 7.80 31.90 3.07
1864 2433 9.918630 AAATGTTAATCAATCTTCTGGTTTCTG 57.081 29.630 0.00 0.00 0.00 3.02
3366 4007 1.649664 CCTCTGAGCAGATGGTTTCG 58.350 55.000 0.00 0.00 36.76 3.46
3381 4042 6.189036 ACTTAACAAGCTTTAAGACCCTCT 57.811 37.500 19.97 0.00 40.24 3.69
3408 4103 4.734398 ACAAGGCAAAACACTGAATGAA 57.266 36.364 0.00 0.00 0.00 2.57
3469 4164 8.861086 ACTAGAGTACATGGTACTATGAATTGG 58.139 37.037 24.30 10.62 0.00 3.16
3778 5151 3.480133 AGATTCGCCCCTTCCCGG 61.480 66.667 0.00 0.00 0.00 5.73
4071 5715 3.126001 TCCCAGCACTGTTAGACAAAG 57.874 47.619 0.00 0.00 0.00 2.77
4132 5779 6.723977 TCCCCAGAAATAAGCATTAACTTTGT 59.276 34.615 0.00 0.00 32.17 2.83
4151 5798 5.327732 AGCCAAATTATGTATGATCCCCAG 58.672 41.667 0.00 0.00 0.00 4.45
4217 5864 6.048732 TCAGTACCTGCAGAACAATCAATA 57.951 37.500 17.39 0.00 0.00 1.90
4237 5884 4.003648 AGCAACCCGAATTTAACTCTCAG 58.996 43.478 0.00 0.00 0.00 3.35
4306 5953 3.689347 ACTAGCCATGTTTGCATCTCAA 58.311 40.909 0.00 0.00 31.99 3.02
4316 5963 1.202927 ACTGCACCAACTAGCCATGTT 60.203 47.619 0.00 0.00 0.00 2.71
4333 5980 9.003658 ACCATACAAAATAGAAGAACTTCACTG 57.996 33.333 15.43 8.00 41.84 3.66
4383 6033 4.718774 AGATGATCCAACAGACTACATGGT 59.281 41.667 0.00 0.00 34.50 3.55
4385 6035 7.048629 ACTAGATGATCCAACAGACTACATG 57.951 40.000 0.00 0.00 0.00 3.21
4408 6058 2.058798 CATCGACCACGGCATACATAC 58.941 52.381 0.00 0.00 40.21 2.39
4417 6067 0.873312 CATCTCAGCATCGACCACGG 60.873 60.000 0.00 0.00 40.21 4.94
4418 6068 0.179127 ACATCTCAGCATCGACCACG 60.179 55.000 0.00 0.00 41.26 4.94
4449 6115 8.316946 ACCTAAAAGTAGAACAACCTACATACC 58.683 37.037 0.00 0.00 41.01 2.73
4588 6255 1.737793 GCATTAACAGGACCAACTCCG 59.262 52.381 0.00 0.00 45.10 4.63
4614 6281 2.159240 TGCTAGTACCTCGCATCACAAG 60.159 50.000 0.00 0.00 27.31 3.16
4615 6282 1.822371 TGCTAGTACCTCGCATCACAA 59.178 47.619 0.00 0.00 27.31 3.33
4643 6310 2.682893 GCCTACTGCTCATTGTCCG 58.317 57.895 0.00 0.00 36.87 4.79
4719 6470 3.437741 TGTGAGCAGCATTATCACAGTTG 59.562 43.478 10.39 0.00 46.17 3.16
4745 6496 1.600076 CTGCCTCTGCTGCAAGTGT 60.600 57.895 3.02 0.00 38.46 3.55
4903 6819 6.329496 CAAGCCACAAAACTCTTTGAAGTTA 58.671 36.000 4.68 0.00 44.03 2.24
4994 6910 9.696917 AGAATAGGACAAGCATTTAACAAAAAG 57.303 29.630 0.00 0.00 0.00 2.27
5010 6926 4.140924 TCCTAGCAGATCCAGAATAGGACA 60.141 45.833 10.59 0.00 41.30 4.02
5029 6945 9.120538 GTAATGCAGGACAATAAAAATCTCCTA 57.879 33.333 0.00 0.00 29.78 2.94
5129 7047 0.599558 TGGCTGCAGTGATCTTTTGC 59.400 50.000 16.64 8.95 38.30 3.68
5175 7095 0.886938 TCGGAAGCAAAATGTCGCCA 60.887 50.000 0.00 0.00 0.00 5.69
5187 7108 2.328099 CCAAGGTGCAGTCGGAAGC 61.328 63.158 0.00 0.00 0.00 3.86
5209 7130 0.878523 TTATGCGCATGTAGCCCGAC 60.879 55.000 32.48 0.00 41.38 4.79
5211 7132 1.568612 CCTTATGCGCATGTAGCCCG 61.569 60.000 32.48 12.58 41.38 6.13
5214 7135 3.691049 TTTTCCTTATGCGCATGTAGC 57.309 42.857 32.48 8.11 40.87 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.