Multiple sequence alignment - TraesCS6D01G006000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G006000 chr6D 100.000 3191 0 0 1 3191 2518385 2521575 0.000000e+00 5893
1 TraesCS6D01G006000 chr6D 83.047 2330 348 34 235 2545 2508712 2511013 0.000000e+00 2071
2 TraesCS6D01G006000 chr6D 85.058 1807 241 18 430 2221 2505134 2503342 0.000000e+00 1814
3 TraesCS6D01G006000 chr6D 83.795 1154 165 16 571 1716 2525082 2523943 0.000000e+00 1075
4 TraesCS6D01G006000 chr6D 81.440 361 66 1 1 361 2525674 2525315 8.660000e-76 294
5 TraesCS6D01G006000 chr6D 81.285 358 65 2 5 361 2505490 2505134 4.030000e-74 289
6 TraesCS6D01G006000 chr6D 79.151 259 35 9 2321 2571 2503219 2502972 9.160000e-36 161
7 TraesCS6D01G006000 chr6D 81.988 161 29 0 424 584 2525321 2525161 1.540000e-28 137
8 TraesCS6D01G006000 chr6A 84.153 2562 375 25 1 2545 1686925 1689472 0.000000e+00 2453
9 TraesCS6D01G006000 chr6A 84.543 1171 170 11 1 1165 1679568 1680733 0.000000e+00 1149
10 TraesCS6D01G006000 chr6A 86.963 675 86 2 1551 2223 1676975 1676301 0.000000e+00 758
11 TraesCS6D01G006000 chr6A 83.237 346 54 4 430 773 1677621 1677278 6.640000e-82 315
12 TraesCS6D01G006000 chr6A 80.716 363 66 4 1 361 1677981 1677621 2.420000e-71 279
13 TraesCS6D01G006000 chr6A 80.986 142 25 1 3050 3189 1689766 1689907 9.360000e-21 111
14 TraesCS6D01G006000 chr6B 84.050 2000 286 25 255 2233 442983 444970 0.000000e+00 1895
15 TraesCS6D01G006000 chr6B 83.850 1808 261 20 430 2221 295077 293285 0.000000e+00 1692
16 TraesCS6D01G006000 chr6B 87.960 706 85 0 1531 2236 3782385 3781680 0.000000e+00 833
17 TraesCS6D01G006000 chr6B 81.267 363 64 4 1 361 295437 295077 1.120000e-74 291
18 TraesCS6D01G006000 chr6B 83.471 121 18 1 2425 2543 3781554 3781434 9.360000e-21 111
19 TraesCS6D01G006000 chr5D 81.046 765 124 18 1531 2289 546381750 546382499 9.860000e-165 590
20 TraesCS6D01G006000 chr5D 79.605 304 55 4 1147 1449 546381351 546381648 8.970000e-51 211
21 TraesCS6D01G006000 chr5A 77.305 564 108 18 1552 2105 653866718 653866165 6.640000e-82 315
22 TraesCS6D01G006000 chr5A 77.348 543 112 9 883 1419 653867450 653866913 8.600000e-81 311


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G006000 chr6D 2518385 2521575 3190 False 5893.000000 5893 100.000000 1 3191 1 chr6D.!!$F2 3190
1 TraesCS6D01G006000 chr6D 2508712 2511013 2301 False 2071.000000 2071 83.047000 235 2545 1 chr6D.!!$F1 2310
2 TraesCS6D01G006000 chr6D 2502972 2505490 2518 True 754.666667 1814 81.831333 5 2571 3 chr6D.!!$R1 2566
3 TraesCS6D01G006000 chr6D 2523943 2525674 1731 True 502.000000 1075 82.407667 1 1716 3 chr6D.!!$R2 1715
4 TraesCS6D01G006000 chr6A 1686925 1689907 2982 False 1282.000000 2453 82.569500 1 3189 2 chr6A.!!$F2 3188
5 TraesCS6D01G006000 chr6A 1679568 1680733 1165 False 1149.000000 1149 84.543000 1 1165 1 chr6A.!!$F1 1164
6 TraesCS6D01G006000 chr6A 1676301 1677981 1680 True 450.666667 758 83.638667 1 2223 3 chr6A.!!$R1 2222
7 TraesCS6D01G006000 chr6B 442983 444970 1987 False 1895.000000 1895 84.050000 255 2233 1 chr6B.!!$F1 1978
8 TraesCS6D01G006000 chr6B 293285 295437 2152 True 991.500000 1692 82.558500 1 2221 2 chr6B.!!$R1 2220
9 TraesCS6D01G006000 chr6B 3781434 3782385 951 True 472.000000 833 85.715500 1531 2543 2 chr6B.!!$R2 1012
10 TraesCS6D01G006000 chr5D 546381351 546382499 1148 False 400.500000 590 80.325500 1147 2289 2 chr5D.!!$F1 1142
11 TraesCS6D01G006000 chr5A 653866165 653867450 1285 True 313.000000 315 77.326500 883 2105 2 chr5A.!!$R1 1222

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
185 186 1.205893 CCCTATCTAGCTGCGGAATCC 59.794 57.143 0.0 0.0 0.00 3.01 F
1073 1171 0.874175 TCCGTGCTTCAGTCACAACG 60.874 55.000 0.0 0.0 34.27 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2145 2333 0.916358 ATGAAGCCCACCCTACAGCT 60.916 55.0 0.00 0.0 37.10 4.24 R
2662 2915 0.036306 GGTGTCTTCCCATCGTGGTT 59.964 55.0 3.82 0.0 35.17 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.957402 TCTTGTGGGCTTCAGAACAT 57.043 45.000 0.00 0.00 0.00 2.71
76 77 3.133691 GCATTCCAATCTCACATCGCTA 58.866 45.455 0.00 0.00 0.00 4.26
96 97 2.273619 AGAGAGCCTCACCCTTGATTT 58.726 47.619 0.00 0.00 32.06 2.17
100 101 5.044550 AGAGAGCCTCACCCTTGATTTAAAT 60.045 40.000 0.00 0.00 32.06 1.40
101 102 5.196695 AGAGCCTCACCCTTGATTTAAATC 58.803 41.667 19.37 19.37 35.97 2.17
185 186 1.205893 CCCTATCTAGCTGCGGAATCC 59.794 57.143 0.00 0.00 0.00 3.01
231 232 3.255888 GGGAACTTGACCTCCATTCAAAC 59.744 47.826 0.00 0.00 32.61 2.93
236 237 2.862541 TGACCTCCATTCAAACACTGG 58.137 47.619 0.00 0.00 0.00 4.00
246 248 5.221501 CCATTCAAACACTGGATCTTGGTTT 60.222 40.000 0.00 0.00 31.38 3.27
247 249 5.514274 TTCAAACACTGGATCTTGGTTTC 57.486 39.130 0.00 0.00 29.89 2.78
252 254 4.473444 ACACTGGATCTTGGTTTCAACAT 58.527 39.130 0.00 0.00 0.00 2.71
288 290 3.005684 GTGCCATCAACCATCAAGAAACA 59.994 43.478 0.00 0.00 0.00 2.83
302 304 8.405531 CCATCAAGAAACAGAAGAAACTACAAA 58.594 33.333 0.00 0.00 0.00 2.83
304 306 9.788960 ATCAAGAAACAGAAGAAACTACAAAAC 57.211 29.630 0.00 0.00 0.00 2.43
308 310 6.694877 AACAGAAGAAACTACAAAACCTCC 57.305 37.500 0.00 0.00 0.00 4.30
377 379 3.257873 TCGGTTGCCATCAAATGAATTGT 59.742 39.130 0.00 0.00 40.11 2.71
397 399 4.211125 TGTATGTGCTGTTTTTGGAGGAA 58.789 39.130 0.00 0.00 0.00 3.36
401 403 3.194861 GTGCTGTTTTTGGAGGAAAACC 58.805 45.455 9.83 0.00 44.78 3.27
426 428 2.111384 GACAGGGAGCTTACCAGATCA 58.889 52.381 10.58 0.00 37.15 2.92
454 456 3.005791 GGCACTTTAGCAACTTGACCATT 59.994 43.478 0.00 0.00 35.83 3.16
457 459 6.389906 GCACTTTAGCAACTTGACCATTATT 58.610 36.000 0.00 0.00 0.00 1.40
459 461 6.308766 CACTTTAGCAACTTGACCATTATTGC 59.691 38.462 0.00 0.00 44.74 3.56
460 462 5.973899 TTAGCAACTTGACCATTATTGCA 57.026 34.783 9.65 0.00 46.38 4.08
526 528 4.273480 CGGGAACTCATAAATTTGAGCGAT 59.727 41.667 7.00 0.00 45.75 4.58
527 529 5.465390 CGGGAACTCATAAATTTGAGCGATA 59.535 40.000 7.00 0.00 45.75 2.92
591 685 4.280677 GGACCATTTCACAAATCTGACCAA 59.719 41.667 0.00 0.00 0.00 3.67
604 698 7.287696 ACAAATCTGACCAACTTACAATTCCTT 59.712 33.333 0.00 0.00 0.00 3.36
740 834 5.591099 GGCTTAACCAACCACATATGATTG 58.409 41.667 10.38 10.34 38.86 2.67
815 909 7.056006 TGCTAATTCCTCTGCTCAATATTTGA 58.944 34.615 0.00 0.00 38.17 2.69
837 931 2.704725 TTGTCAAGAAATCGGCTTGC 57.295 45.000 0.00 0.00 41.83 4.01
876 970 5.636903 TTTTCCCTATCATCTCCCTTGAG 57.363 43.478 0.00 0.00 40.17 3.02
904 998 5.344743 TGGATGTCAGTTCTAACCAGATC 57.655 43.478 0.00 0.00 0.00 2.75
930 1025 2.607038 GCCGATTCCAACACTTCCAAAC 60.607 50.000 0.00 0.00 0.00 2.93
937 1032 4.204012 TCCAACACTTCCAAACAACCTAG 58.796 43.478 0.00 0.00 0.00 3.02
1032 1130 7.067496 AGTACTCCTTCTCTTCAACAATTCA 57.933 36.000 0.00 0.00 0.00 2.57
1043 1141 8.355169 TCTCTTCAACAATTCATTTTCTGGAAG 58.645 33.333 0.00 0.00 0.00 3.46
1068 1166 1.005748 CTGCTCCGTGCTTCAGTCA 60.006 57.895 0.00 0.00 43.37 3.41
1073 1171 0.874175 TCCGTGCTTCAGTCACAACG 60.874 55.000 0.00 0.00 34.27 4.10
1145 1243 3.752704 CCCTCGCGGGTTCAAAAA 58.247 55.556 4.71 0.00 46.12 1.94
1157 1255 6.583050 CGCGGGTTCAAAAACTCAAATATTAA 59.417 34.615 0.00 0.00 35.43 1.40
1222 1322 6.395629 CCATTGTTTCTTCAGAAATGCAGAT 58.604 36.000 5.30 0.00 44.69 2.90
1263 1363 7.953005 TCTGGCATACAATAAATTTTCTGGA 57.047 32.000 0.00 0.00 0.00 3.86
1315 1415 2.223572 CCACAACTGGCACTTTTGAGTC 60.224 50.000 5.90 0.00 0.00 3.36
1321 1421 1.439365 GCACTTTTGAGTCTGCGCG 60.439 57.895 0.00 0.00 0.00 6.86
1419 1519 3.262420 CAACTTCTCAGGGAACATACCG 58.738 50.000 0.00 0.00 0.00 4.02
1438 1597 1.084370 GCGGTCACTTGGGAATCTCG 61.084 60.000 0.00 0.00 0.00 4.04
1449 1608 2.891580 TGGGAATCTCGTAGCTATGACC 59.108 50.000 11.74 11.04 0.00 4.02
1457 1616 5.682659 TCTCGTAGCTATGACCTCTACTTT 58.317 41.667 11.74 0.00 32.65 2.66
1462 1621 7.068348 TCGTAGCTATGACCTCTACTTTCAATT 59.932 37.037 11.74 0.00 32.65 2.32
1500 1674 7.461182 TTTCGACCTTGTTGATTATGGATTT 57.539 32.000 0.00 0.00 0.00 2.17
1505 1679 5.484998 ACCTTGTTGATTATGGATTTGGCTT 59.515 36.000 0.00 0.00 0.00 4.35
1507 1681 7.147846 ACCTTGTTGATTATGGATTTGGCTTAG 60.148 37.037 0.00 0.00 0.00 2.18
1517 1691 4.218312 GGATTTGGCTTAGTGGATTCCAT 58.782 43.478 9.01 1.04 35.28 3.41
1529 1714 5.950023 AGTGGATTCCATTTATGCTCATCT 58.050 37.500 9.01 0.00 35.28 2.90
1539 1724 9.060347 TCCATTTATGCTCATCTTGATAGTTTC 57.940 33.333 0.00 0.00 0.00 2.78
1545 1730 7.369803 TGCTCATCTTGATAGTTTCTTTGTC 57.630 36.000 0.00 0.00 0.00 3.18
1561 1746 6.497785 TCTTTGTCAACGTAAAAGGTCAAA 57.502 33.333 10.97 0.00 32.84 2.69
1569 1754 7.486870 GTCAACGTAAAAGGTCAAAAACTTGAT 59.513 33.333 0.00 0.00 33.02 2.57
1602 1787 4.314961 GGATCGCATACATGGTGAACATA 58.685 43.478 0.00 0.00 37.84 2.29
1652 1840 4.461781 ACAGATTCCTCAAGAAATTGGCAG 59.538 41.667 0.00 0.00 38.21 4.85
1812 2000 8.754080 AGTTTATCAGCTCTAACATCACTAAGT 58.246 33.333 0.00 0.00 0.00 2.24
1815 2003 4.941873 TCAGCTCTAACATCACTAAGTCGA 59.058 41.667 0.00 0.00 0.00 4.20
1856 2044 8.727100 AATGATCTGACAGGAACTATACCATA 57.273 34.615 1.81 0.00 36.02 2.74
1911 2099 1.922447 TCCATCTACATTGGCAACCCT 59.078 47.619 0.00 0.00 34.06 4.34
1912 2100 3.118038 GTCCATCTACATTGGCAACCCTA 60.118 47.826 0.00 0.00 34.06 3.53
1915 2103 4.526970 CATCTACATTGGCAACCCTAGTT 58.473 43.478 0.00 0.00 36.33 2.24
1960 2148 4.201724 GGAATTGCTCACGAACTGACATAC 60.202 45.833 0.00 0.00 0.00 2.39
1965 2153 3.172050 CTCACGAACTGACATACTTCCG 58.828 50.000 0.00 0.00 0.00 4.30
2004 2192 5.351458 CATGACGAAGGAATGAGTGATGTA 58.649 41.667 0.00 0.00 0.00 2.29
2009 2197 6.231211 ACGAAGGAATGAGTGATGTAGTTTT 58.769 36.000 0.00 0.00 0.00 2.43
2076 2264 5.691754 GGTTGTCTTTTGTGGCTTCTTATTG 59.308 40.000 0.00 0.00 0.00 1.90
2105 2293 0.930726 TGGAGGGTTGGTTGGTTCTT 59.069 50.000 0.00 0.00 0.00 2.52
2119 2307 5.106830 GGTTGGTTCTTATTTACAGACCACG 60.107 44.000 0.00 0.00 0.00 4.94
2145 2333 2.162809 TGATCGAGCTTACGTGCAAGTA 59.837 45.455 8.51 8.51 34.99 2.24
2151 2339 2.230508 AGCTTACGTGCAAGTAGCTGTA 59.769 45.455 24.28 7.98 45.94 2.74
2154 2342 0.246635 ACGTGCAAGTAGCTGTAGGG 59.753 55.000 2.53 0.00 45.94 3.53
2223 2412 4.184629 GCTGGAACATCTGTTGGTACTAG 58.815 47.826 0.00 0.00 38.56 2.57
2338 2574 7.696992 ATTGGAATTGTACTTGTATTCGGTT 57.303 32.000 0.00 0.00 0.00 4.44
2360 2601 8.345224 GGTTGTGTATAAACCGAATACTCTAC 57.655 38.462 0.00 0.00 37.90 2.59
2367 2613 3.111741 ACCGAATACTCTACAAGGGGT 57.888 47.619 0.00 0.00 0.00 4.95
2387 2633 3.183373 GGTGTGTGTTTGTTGTTGTTGTG 59.817 43.478 0.00 0.00 0.00 3.33
2390 2636 3.183373 GTGTGTTTGTTGTTGTTGTGGTG 59.817 43.478 0.00 0.00 0.00 4.17
2391 2637 3.181475 TGTGTTTGTTGTTGTTGTGGTGT 60.181 39.130 0.00 0.00 0.00 4.16
2392 2638 3.804873 GTGTTTGTTGTTGTTGTGGTGTT 59.195 39.130 0.00 0.00 0.00 3.32
2393 2639 4.982916 GTGTTTGTTGTTGTTGTGGTGTTA 59.017 37.500 0.00 0.00 0.00 2.41
2394 2640 5.117897 GTGTTTGTTGTTGTTGTGGTGTTAG 59.882 40.000 0.00 0.00 0.00 2.34
2395 2641 5.221263 TGTTTGTTGTTGTTGTGGTGTTAGT 60.221 36.000 0.00 0.00 0.00 2.24
2398 2644 6.184580 TGTTGTTGTTGTGGTGTTAGTTAG 57.815 37.500 0.00 0.00 0.00 2.34
2399 2645 5.706369 TGTTGTTGTTGTGGTGTTAGTTAGT 59.294 36.000 0.00 0.00 0.00 2.24
2401 2647 7.389884 TGTTGTTGTTGTGGTGTTAGTTAGTTA 59.610 33.333 0.00 0.00 0.00 2.24
2461 2714 4.373156 AAGGTGTGGATAAAGCTGAAGT 57.627 40.909 0.00 0.00 0.00 3.01
2506 2759 5.102313 TCTGATTGCTCTATGTAACACGTG 58.898 41.667 15.48 15.48 0.00 4.49
2550 2803 3.149196 TGCTTCTAGCCTCAAAACCTTG 58.851 45.455 0.00 0.00 41.51 3.61
2557 2810 3.500343 AGCCTCAAAACCTTGTATGCTT 58.500 40.909 0.00 0.00 32.05 3.91
2561 2814 4.475944 CTCAAAACCTTGTATGCTTTCGG 58.524 43.478 0.00 0.00 33.94 4.30
2568 2821 1.077716 GTATGCTTTCGGGGCCACT 60.078 57.895 1.96 0.00 0.00 4.00
2571 2824 3.062466 GCTTTCGGGGCCACTTCC 61.062 66.667 1.96 0.00 0.00 3.46
2572 2825 2.361230 CTTTCGGGGCCACTTCCC 60.361 66.667 1.96 0.00 45.80 3.97
2578 2831 3.181282 GGGCCACTTCCCCTTTCT 58.819 61.111 4.39 0.00 40.51 2.52
2579 2832 1.465172 GGGCCACTTCCCCTTTCTT 59.535 57.895 4.39 0.00 40.51 2.52
2580 2833 0.612174 GGGCCACTTCCCCTTTCTTC 60.612 60.000 4.39 0.00 40.51 2.87
2581 2834 0.612174 GGCCACTTCCCCTTTCTTCC 60.612 60.000 0.00 0.00 0.00 3.46
2582 2835 0.960861 GCCACTTCCCCTTTCTTCCG 60.961 60.000 0.00 0.00 0.00 4.30
2583 2836 0.400594 CCACTTCCCCTTTCTTCCGT 59.599 55.000 0.00 0.00 0.00 4.69
2584 2837 1.626825 CCACTTCCCCTTTCTTCCGTA 59.373 52.381 0.00 0.00 0.00 4.02
2585 2838 2.238898 CCACTTCCCCTTTCTTCCGTAT 59.761 50.000 0.00 0.00 0.00 3.06
2586 2839 3.532542 CACTTCCCCTTTCTTCCGTATC 58.467 50.000 0.00 0.00 0.00 2.24
2587 2840 3.197983 CACTTCCCCTTTCTTCCGTATCT 59.802 47.826 0.00 0.00 0.00 1.98
2588 2841 4.404715 CACTTCCCCTTTCTTCCGTATCTA 59.595 45.833 0.00 0.00 0.00 1.98
2589 2842 5.070580 CACTTCCCCTTTCTTCCGTATCTAT 59.929 44.000 0.00 0.00 0.00 1.98
2590 2843 6.267014 CACTTCCCCTTTCTTCCGTATCTATA 59.733 42.308 0.00 0.00 0.00 1.31
2591 2844 7.017531 ACTTCCCCTTTCTTCCGTATCTATAT 58.982 38.462 0.00 0.00 0.00 0.86
2592 2845 7.178805 ACTTCCCCTTTCTTCCGTATCTATATC 59.821 40.741 0.00 0.00 0.00 1.63
2593 2846 6.558498 TCCCCTTTCTTCCGTATCTATATCA 58.442 40.000 0.00 0.00 0.00 2.15
2594 2847 7.189794 TCCCCTTTCTTCCGTATCTATATCAT 58.810 38.462 0.00 0.00 0.00 2.45
2595 2848 7.678598 TCCCCTTTCTTCCGTATCTATATCATT 59.321 37.037 0.00 0.00 0.00 2.57
2596 2849 7.982354 CCCCTTTCTTCCGTATCTATATCATTC 59.018 40.741 0.00 0.00 0.00 2.67
2597 2850 8.531982 CCCTTTCTTCCGTATCTATATCATTCA 58.468 37.037 0.00 0.00 0.00 2.57
2600 2853 9.875691 TTTCTTCCGTATCTATATCATTCATGG 57.124 33.333 0.00 0.00 0.00 3.66
2601 2854 8.595362 TCTTCCGTATCTATATCATTCATGGT 57.405 34.615 0.00 0.00 0.00 3.55
2602 2855 9.035890 TCTTCCGTATCTATATCATTCATGGTT 57.964 33.333 0.00 0.00 0.00 3.67
2603 2856 9.091784 CTTCCGTATCTATATCATTCATGGTTG 57.908 37.037 0.00 0.00 0.00 3.77
2604 2857 7.555965 TCCGTATCTATATCATTCATGGTTGG 58.444 38.462 0.00 0.00 0.00 3.77
2605 2858 7.180229 TCCGTATCTATATCATTCATGGTTGGT 59.820 37.037 0.00 0.00 0.00 3.67
2606 2859 7.824289 CCGTATCTATATCATTCATGGTTGGTT 59.176 37.037 0.00 0.00 0.00 3.67
2607 2860 9.219603 CGTATCTATATCATTCATGGTTGGTTT 57.780 33.333 0.00 0.00 0.00 3.27
2614 2867 5.324409 TCATTCATGGTTGGTTTAAGCTCT 58.676 37.500 0.00 0.00 37.65 4.09
2616 2869 6.945435 TCATTCATGGTTGGTTTAAGCTCTTA 59.055 34.615 0.00 0.00 37.65 2.10
2619 2872 6.245408 TCATGGTTGGTTTAAGCTCTTATGT 58.755 36.000 0.00 0.00 37.65 2.29
2620 2873 6.719370 TCATGGTTGGTTTAAGCTCTTATGTT 59.281 34.615 0.00 0.00 37.65 2.71
2621 2874 6.325919 TGGTTGGTTTAAGCTCTTATGTTG 57.674 37.500 0.00 0.00 37.65 3.33
2623 2876 6.999272 TGGTTGGTTTAAGCTCTTATGTTGTA 59.001 34.615 0.00 0.00 37.65 2.41
2634 2887 6.458232 CTCTTATGTTGTAGAGCCTACACT 57.542 41.667 12.79 5.87 32.27 3.55
2636 2889 5.949952 TCTTATGTTGTAGAGCCTACACTCA 59.050 40.000 12.79 14.06 39.26 3.41
2637 2890 6.436218 TCTTATGTTGTAGAGCCTACACTCAA 59.564 38.462 12.79 6.29 39.26 3.02
2639 2892 3.006537 TGTTGTAGAGCCTACACTCAACC 59.993 47.826 12.79 1.82 39.26 3.77
2641 2894 1.481363 GTAGAGCCTACACTCAACCCC 59.519 57.143 7.30 0.00 39.26 4.95
2642 2895 0.178903 AGAGCCTACACTCAACCCCA 60.179 55.000 0.00 0.00 39.26 4.96
2643 2896 0.690762 GAGCCTACACTCAACCCCAA 59.309 55.000 0.00 0.00 36.65 4.12
2645 2898 0.400594 GCCTACACTCAACCCCAACT 59.599 55.000 0.00 0.00 0.00 3.16
2646 2899 1.610886 GCCTACACTCAACCCCAACTC 60.611 57.143 0.00 0.00 0.00 3.01
2647 2900 1.978580 CCTACACTCAACCCCAACTCT 59.021 52.381 0.00 0.00 0.00 3.24
2648 2901 2.289694 CCTACACTCAACCCCAACTCTG 60.290 54.545 0.00 0.00 0.00 3.35
2649 2902 0.474184 ACACTCAACCCCAACTCTGG 59.526 55.000 0.00 0.00 43.10 3.86
2650 2903 0.474184 CACTCAACCCCAACTCTGGT 59.526 55.000 0.00 0.00 41.72 4.00
2651 2904 1.697432 CACTCAACCCCAACTCTGGTA 59.303 52.381 0.00 0.00 41.72 3.25
2652 2905 2.105821 CACTCAACCCCAACTCTGGTAA 59.894 50.000 0.00 0.00 41.72 2.85
2653 2906 2.781174 ACTCAACCCCAACTCTGGTAAA 59.219 45.455 0.00 0.00 41.72 2.01
2654 2907 3.146847 CTCAACCCCAACTCTGGTAAAC 58.853 50.000 0.00 0.00 41.72 2.01
2655 2908 2.781174 TCAACCCCAACTCTGGTAAACT 59.219 45.455 0.00 0.00 41.72 2.66
2656 2909 3.975312 TCAACCCCAACTCTGGTAAACTA 59.025 43.478 0.00 0.00 41.72 2.24
2657 2910 4.412858 TCAACCCCAACTCTGGTAAACTAA 59.587 41.667 0.00 0.00 41.72 2.24
2658 2911 4.362470 ACCCCAACTCTGGTAAACTAAC 57.638 45.455 0.00 0.00 41.72 2.34
2659 2912 3.073503 ACCCCAACTCTGGTAAACTAACC 59.926 47.826 0.00 0.00 41.72 2.85
2660 2913 3.560668 CCCCAACTCTGGTAAACTAACCC 60.561 52.174 0.00 0.00 41.72 4.11
2661 2914 3.073356 CCCAACTCTGGTAAACTAACCCA 59.927 47.826 0.00 0.00 41.72 4.51
2662 2915 4.446600 CCCAACTCTGGTAAACTAACCCAA 60.447 45.833 0.00 0.00 41.72 4.12
2663 2916 5.134661 CCAACTCTGGTAAACTAACCCAAA 58.865 41.667 0.00 0.00 38.90 3.28
2664 2917 5.009310 CCAACTCTGGTAAACTAACCCAAAC 59.991 44.000 0.00 0.00 38.90 2.93
2665 2918 4.722220 ACTCTGGTAAACTAACCCAAACC 58.278 43.478 0.00 0.00 38.90 3.27
2666 2919 4.166531 ACTCTGGTAAACTAACCCAAACCA 59.833 41.667 0.00 0.00 38.90 3.67
2667 2920 4.463070 TCTGGTAAACTAACCCAAACCAC 58.537 43.478 0.00 0.00 38.90 4.16
2668 2921 3.212685 TGGTAAACTAACCCAAACCACG 58.787 45.455 0.00 0.00 38.90 4.94
2669 2922 3.118112 TGGTAAACTAACCCAAACCACGA 60.118 43.478 0.00 0.00 38.90 4.35
2670 2923 4.074259 GGTAAACTAACCCAAACCACGAT 58.926 43.478 0.00 0.00 33.02 3.73
2671 2924 4.083164 GGTAAACTAACCCAAACCACGATG 60.083 45.833 0.00 0.00 33.02 3.84
2672 2925 2.194201 ACTAACCCAAACCACGATGG 57.806 50.000 0.00 0.00 45.02 3.51
2677 2930 3.642938 CCAAACCACGATGGGAAGA 57.357 52.632 8.57 0.00 43.37 2.87
2678 2931 1.165270 CCAAACCACGATGGGAAGAC 58.835 55.000 8.57 0.00 43.37 3.01
2679 2932 1.544537 CCAAACCACGATGGGAAGACA 60.545 52.381 8.57 0.00 43.37 3.41
2680 2933 1.535462 CAAACCACGATGGGAAGACAC 59.465 52.381 8.57 0.00 43.37 3.67
2681 2934 0.036306 AACCACGATGGGAAGACACC 59.964 55.000 8.57 0.00 43.37 4.16
2682 2935 0.836400 ACCACGATGGGAAGACACCT 60.836 55.000 8.57 0.00 43.37 4.00
2683 2936 0.108138 CCACGATGGGAAGACACCTC 60.108 60.000 0.00 0.00 32.67 3.85
2684 2937 0.458543 CACGATGGGAAGACACCTCG 60.459 60.000 0.00 0.00 35.90 4.63
2685 2938 0.611062 ACGATGGGAAGACACCTCGA 60.611 55.000 0.00 0.00 34.76 4.04
2686 2939 0.747255 CGATGGGAAGACACCTCGAT 59.253 55.000 0.00 0.00 33.47 3.59
2687 2940 1.536922 CGATGGGAAGACACCTCGATG 60.537 57.143 0.00 0.00 33.47 3.84
2688 2941 0.833287 ATGGGAAGACACCTCGATGG 59.167 55.000 0.00 0.00 42.93 3.51
2689 2942 1.153349 GGGAAGACACCTCGATGGC 60.153 63.158 0.00 0.00 40.22 4.40
2690 2943 1.617947 GGGAAGACACCTCGATGGCT 61.618 60.000 0.00 0.00 40.83 4.75
2691 2944 0.179097 GGAAGACACCTCGATGGCTC 60.179 60.000 0.00 0.00 36.73 4.70
2692 2945 0.532573 GAAGACACCTCGATGGCTCA 59.467 55.000 0.00 0.00 36.73 4.26
2693 2946 0.976641 AAGACACCTCGATGGCTCAA 59.023 50.000 0.00 0.00 36.73 3.02
2694 2947 0.976641 AGACACCTCGATGGCTCAAA 59.023 50.000 0.00 0.00 29.04 2.69
2695 2948 1.347707 AGACACCTCGATGGCTCAAAA 59.652 47.619 0.00 0.00 29.04 2.44
2696 2949 1.734465 GACACCTCGATGGCTCAAAAG 59.266 52.381 0.00 0.00 40.22 2.27
2697 2950 1.347707 ACACCTCGATGGCTCAAAAGA 59.652 47.619 0.00 0.00 40.22 2.52
2698 2951 2.224523 ACACCTCGATGGCTCAAAAGAA 60.225 45.455 0.00 0.00 40.22 2.52
2699 2952 2.417933 CACCTCGATGGCTCAAAAGAAG 59.582 50.000 0.00 0.00 40.22 2.85
2700 2953 2.303022 ACCTCGATGGCTCAAAAGAAGA 59.697 45.455 0.00 0.00 40.22 2.87
2701 2954 2.675348 CCTCGATGGCTCAAAAGAAGAC 59.325 50.000 0.00 0.00 0.00 3.01
2702 2955 3.329386 CTCGATGGCTCAAAAGAAGACA 58.671 45.455 0.00 0.00 35.88 3.41
2703 2956 3.067106 TCGATGGCTCAAAAGAAGACAC 58.933 45.455 0.00 0.00 33.72 3.67
2704 2957 2.807967 CGATGGCTCAAAAGAAGACACA 59.192 45.455 0.00 0.00 33.72 3.72
2705 2958 3.438087 CGATGGCTCAAAAGAAGACACAT 59.562 43.478 0.00 0.00 33.72 3.21
2706 2959 4.670992 CGATGGCTCAAAAGAAGACACATG 60.671 45.833 0.00 0.00 33.72 3.21
2707 2960 3.819368 TGGCTCAAAAGAAGACACATGA 58.181 40.909 0.00 0.00 0.00 3.07
2708 2961 4.206375 TGGCTCAAAAGAAGACACATGAA 58.794 39.130 0.00 0.00 0.00 2.57
2709 2962 4.036734 TGGCTCAAAAGAAGACACATGAAC 59.963 41.667 0.00 0.00 0.00 3.18
2710 2963 4.036734 GGCTCAAAAGAAGACACATGAACA 59.963 41.667 0.00 0.00 0.00 3.18
2711 2964 5.450412 GGCTCAAAAGAAGACACATGAACAA 60.450 40.000 0.00 0.00 0.00 2.83
2712 2965 6.035843 GCTCAAAAGAAGACACATGAACAAA 58.964 36.000 0.00 0.00 0.00 2.83
2713 2966 6.531240 GCTCAAAAGAAGACACATGAACAAAA 59.469 34.615 0.00 0.00 0.00 2.44
2714 2967 7.253883 GCTCAAAAGAAGACACATGAACAAAAG 60.254 37.037 0.00 0.00 0.00 2.27
2715 2968 6.531240 TCAAAAGAAGACACATGAACAAAAGC 59.469 34.615 0.00 0.00 0.00 3.51
2716 2969 5.841957 AAGAAGACACATGAACAAAAGCT 57.158 34.783 0.00 0.00 0.00 3.74
2717 2970 5.841957 AGAAGACACATGAACAAAAGCTT 57.158 34.783 0.00 0.00 0.00 3.74
2718 2971 5.825507 AGAAGACACATGAACAAAAGCTTC 58.174 37.500 0.00 0.00 0.00 3.86
2719 2972 5.357878 AGAAGACACATGAACAAAAGCTTCA 59.642 36.000 0.00 0.00 33.55 3.02
2720 2973 5.179045 AGACACATGAACAAAAGCTTCAG 57.821 39.130 0.00 0.00 31.22 3.02
2721 2974 4.641989 AGACACATGAACAAAAGCTTCAGT 59.358 37.500 0.00 0.00 31.22 3.41
2722 2975 5.126061 AGACACATGAACAAAAGCTTCAGTT 59.874 36.000 14.21 14.21 31.22 3.16
2723 2976 5.723295 ACACATGAACAAAAGCTTCAGTTT 58.277 33.333 15.13 0.00 31.22 2.66
2724 2977 5.577945 ACACATGAACAAAAGCTTCAGTTTG 59.422 36.000 15.13 11.31 39.98 2.93
2725 2978 4.567959 ACATGAACAAAAGCTTCAGTTTGC 59.432 37.500 15.13 6.76 38.10 3.68
2726 2979 4.454728 TGAACAAAAGCTTCAGTTTGCT 57.545 36.364 15.13 1.82 41.82 3.91
2727 2980 4.175516 TGAACAAAAGCTTCAGTTTGCTG 58.824 39.130 15.13 0.00 43.87 4.41
2728 2981 3.169355 ACAAAAGCTTCAGTTTGCTGG 57.831 42.857 0.00 0.00 42.78 4.85
2729 2982 2.497273 ACAAAAGCTTCAGTTTGCTGGT 59.503 40.909 0.00 0.00 42.78 4.00
2730 2983 3.699038 ACAAAAGCTTCAGTTTGCTGGTA 59.301 39.130 0.00 0.00 42.78 3.25
2731 2984 4.342092 ACAAAAGCTTCAGTTTGCTGGTAT 59.658 37.500 0.00 0.00 42.78 2.73
2732 2985 5.163416 ACAAAAGCTTCAGTTTGCTGGTATT 60.163 36.000 0.00 0.00 42.78 1.89
2733 2986 4.510038 AAGCTTCAGTTTGCTGGTATTG 57.490 40.909 0.00 0.00 42.78 1.90
2734 2987 3.490348 AGCTTCAGTTTGCTGGTATTGT 58.510 40.909 0.00 0.00 42.78 2.71
2735 2988 4.651778 AGCTTCAGTTTGCTGGTATTGTA 58.348 39.130 0.00 0.00 42.78 2.41
2736 2989 4.697352 AGCTTCAGTTTGCTGGTATTGTAG 59.303 41.667 0.00 0.00 42.78 2.74
2737 2990 4.672801 GCTTCAGTTTGCTGGTATTGTAGC 60.673 45.833 0.00 0.00 42.78 3.58
2744 2997 0.652592 CTGGTATTGTAGCAGCACGC 59.347 55.000 0.00 0.00 45.81 5.34
2757 3010 3.075998 CACGCGCTAGTGCTGAAG 58.924 61.111 24.83 12.40 35.17 3.02
2758 3011 2.811317 ACGCGCTAGTGCTGAAGC 60.811 61.111 24.83 0.00 42.50 3.86
2759 3012 2.507992 CGCGCTAGTGCTGAAGCT 60.508 61.111 24.83 0.00 42.66 3.74
2760 3013 2.796425 CGCGCTAGTGCTGAAGCTG 61.796 63.158 24.83 4.78 42.66 4.24
2761 3014 2.459442 GCGCTAGTGCTGAAGCTGG 61.459 63.158 20.99 0.00 42.66 4.85
2762 3015 2.459442 CGCTAGTGCTGAAGCTGGC 61.459 63.158 3.61 0.00 42.66 4.85
2763 3016 1.376424 GCTAGTGCTGAAGCTGGCA 60.376 57.895 3.61 5.36 42.66 4.92
2767 3020 2.192711 TGCTGAAGCTGGCACACA 59.807 55.556 3.61 0.00 42.66 3.72
2768 3021 1.228337 TGCTGAAGCTGGCACACAT 60.228 52.632 3.61 0.00 42.66 3.21
2769 3022 1.211969 GCTGAAGCTGGCACACATG 59.788 57.895 0.00 0.00 38.21 3.21
2770 3023 1.521450 GCTGAAGCTGGCACACATGT 61.521 55.000 0.00 0.00 38.21 3.21
2771 3024 0.956633 CTGAAGCTGGCACACATGTT 59.043 50.000 0.00 0.00 0.00 2.71
2772 3025 1.338973 CTGAAGCTGGCACACATGTTT 59.661 47.619 0.00 0.00 0.00 2.83
2773 3026 1.067364 TGAAGCTGGCACACATGTTTG 59.933 47.619 7.65 7.65 0.00 2.93
2774 3027 1.337703 GAAGCTGGCACACATGTTTGA 59.662 47.619 16.10 0.00 0.00 2.69
2775 3028 0.956633 AGCTGGCACACATGTTTGAG 59.043 50.000 16.10 6.29 0.00 3.02
2776 3029 0.953727 GCTGGCACACATGTTTGAGA 59.046 50.000 16.10 0.13 0.00 3.27
2777 3030 1.068748 GCTGGCACACATGTTTGAGAG 60.069 52.381 16.10 10.50 0.00 3.20
2778 3031 0.953727 TGGCACACATGTTTGAGAGC 59.046 50.000 16.10 5.55 31.26 4.09
2779 3032 0.242017 GGCACACATGTTTGAGAGCC 59.758 55.000 16.10 10.93 41.29 4.70
2780 3033 1.242076 GCACACATGTTTGAGAGCCT 58.758 50.000 16.10 0.00 0.00 4.58
2781 3034 1.198637 GCACACATGTTTGAGAGCCTC 59.801 52.381 16.10 0.00 0.00 4.70
2782 3035 2.497138 CACACATGTTTGAGAGCCTCA 58.503 47.619 6.09 1.25 38.87 3.86
2783 3036 2.880268 CACACATGTTTGAGAGCCTCAA 59.120 45.455 6.09 12.03 46.93 3.02
2795 3048 6.764308 TGAGAGCCTCAAAATATTTTGGAG 57.236 37.500 30.96 25.54 45.68 3.86
2796 3049 6.248433 TGAGAGCCTCAAAATATTTTGGAGT 58.752 36.000 30.96 18.22 45.68 3.85
2797 3050 6.151648 TGAGAGCCTCAAAATATTTTGGAGTG 59.848 38.462 30.96 20.58 45.68 3.51
2798 3051 5.077134 AGCCTCAAAATATTTTGGAGTGC 57.923 39.130 30.96 26.28 45.68 4.40
2799 3052 4.527816 AGCCTCAAAATATTTTGGAGTGCA 59.472 37.500 30.96 15.90 45.68 4.57
2800 3053 5.188359 AGCCTCAAAATATTTTGGAGTGCAT 59.812 36.000 30.96 17.93 45.68 3.96
2801 3054 5.876460 GCCTCAAAATATTTTGGAGTGCATT 59.124 36.000 30.96 0.00 45.68 3.56
2802 3055 6.036408 GCCTCAAAATATTTTGGAGTGCATTC 59.964 38.462 30.96 0.00 45.68 2.67
2803 3056 7.098477 CCTCAAAATATTTTGGAGTGCATTCA 58.902 34.615 30.96 13.61 45.68 2.57
2804 3057 7.603404 CCTCAAAATATTTTGGAGTGCATTCAA 59.397 33.333 30.96 13.20 45.68 2.69
2805 3058 8.899427 TCAAAATATTTTGGAGTGCATTCAAA 57.101 26.923 30.96 11.83 45.68 2.69
2806 3059 9.334947 TCAAAATATTTTGGAGTGCATTCAAAA 57.665 25.926 30.96 19.48 45.68 2.44
2807 3060 9.384682 CAAAATATTTTGGAGTGCATTCAAAAC 57.615 29.630 26.58 0.00 42.81 2.43
2808 3061 7.671495 AATATTTTGGAGTGCATTCAAAACC 57.329 32.000 11.05 0.00 41.28 3.27
2809 3062 4.478206 TTTTGGAGTGCATTCAAAACCA 57.522 36.364 11.05 0.00 36.04 3.67
2810 3063 4.686191 TTTGGAGTGCATTCAAAACCAT 57.314 36.364 11.67 0.00 0.00 3.55
2811 3064 4.686191 TTGGAGTGCATTCAAAACCATT 57.314 36.364 11.67 0.00 0.00 3.16
2812 3065 5.798125 TTGGAGTGCATTCAAAACCATTA 57.202 34.783 11.67 0.00 0.00 1.90
2813 3066 5.999205 TGGAGTGCATTCAAAACCATTAT 57.001 34.783 11.67 0.00 0.00 1.28
2814 3067 7.473735 TTGGAGTGCATTCAAAACCATTATA 57.526 32.000 11.67 0.00 0.00 0.98
2815 3068 7.099266 TGGAGTGCATTCAAAACCATTATAG 57.901 36.000 11.67 0.00 0.00 1.31
2816 3069 6.889177 TGGAGTGCATTCAAAACCATTATAGA 59.111 34.615 11.67 0.00 0.00 1.98
2817 3070 7.067372 TGGAGTGCATTCAAAACCATTATAGAG 59.933 37.037 11.67 0.00 0.00 2.43
2818 3071 7.283127 GGAGTGCATTCAAAACCATTATAGAGA 59.717 37.037 11.67 0.00 0.00 3.10
2819 3072 7.989826 AGTGCATTCAAAACCATTATAGAGAC 58.010 34.615 0.00 0.00 0.00 3.36
2820 3073 7.831193 AGTGCATTCAAAACCATTATAGAGACT 59.169 33.333 0.00 0.00 0.00 3.24
2821 3074 7.912250 GTGCATTCAAAACCATTATAGAGACTG 59.088 37.037 0.00 0.00 0.00 3.51
2822 3075 6.914757 GCATTCAAAACCATTATAGAGACTGC 59.085 38.462 0.00 0.00 0.00 4.40
2823 3076 7.420800 CATTCAAAACCATTATAGAGACTGCC 58.579 38.462 0.00 0.00 0.00 4.85
2824 3077 6.061022 TCAAAACCATTATAGAGACTGCCA 57.939 37.500 0.00 0.00 0.00 4.92
2825 3078 6.662755 TCAAAACCATTATAGAGACTGCCAT 58.337 36.000 0.00 0.00 0.00 4.40
2826 3079 7.118723 TCAAAACCATTATAGAGACTGCCATT 58.881 34.615 0.00 0.00 0.00 3.16
2827 3080 7.283127 TCAAAACCATTATAGAGACTGCCATTC 59.717 37.037 0.00 0.00 0.00 2.67
2828 3081 6.506538 AACCATTATAGAGACTGCCATTCT 57.493 37.500 0.00 0.00 0.00 2.40
2829 3082 7.618019 AACCATTATAGAGACTGCCATTCTA 57.382 36.000 0.00 0.00 0.00 2.10
2830 3083 7.238486 ACCATTATAGAGACTGCCATTCTAG 57.762 40.000 0.00 0.00 0.00 2.43
2831 3084 7.013220 ACCATTATAGAGACTGCCATTCTAGA 58.987 38.462 0.00 0.00 0.00 2.43
2832 3085 7.178274 ACCATTATAGAGACTGCCATTCTAGAG 59.822 40.741 0.00 0.00 0.00 2.43
2833 3086 7.178274 CCATTATAGAGACTGCCATTCTAGAGT 59.822 40.741 0.00 0.00 0.00 3.24
2834 3087 7.753309 TTATAGAGACTGCCATTCTAGAGTC 57.247 40.000 0.00 0.00 35.97 3.36
2835 3088 4.249638 AGAGACTGCCATTCTAGAGTCT 57.750 45.455 9.21 9.21 46.21 3.24
2836 3089 4.609301 AGAGACTGCCATTCTAGAGTCTT 58.391 43.478 10.43 1.15 44.11 3.01
2837 3090 5.022787 AGAGACTGCCATTCTAGAGTCTTT 58.977 41.667 10.43 3.88 44.11 2.52
2838 3091 5.483583 AGAGACTGCCATTCTAGAGTCTTTT 59.516 40.000 10.43 2.25 44.11 2.27
2839 3092 6.013812 AGAGACTGCCATTCTAGAGTCTTTTT 60.014 38.462 10.43 0.35 44.11 1.94
2878 3131 3.876274 GAGAATCTACTCACTGGTGCA 57.124 47.619 0.00 0.00 36.95 4.57
2879 3132 3.779759 GAGAATCTACTCACTGGTGCAG 58.220 50.000 0.00 0.00 36.95 4.41
2880 3133 3.169099 AGAATCTACTCACTGGTGCAGT 58.831 45.455 0.00 0.00 46.51 4.40
2887 3140 4.320456 ACTGGTGCAGTGAGCCCG 62.320 66.667 0.00 0.00 43.63 6.13
2888 3141 4.320456 CTGGTGCAGTGAGCCCGT 62.320 66.667 0.00 0.00 44.83 5.28
2889 3142 3.832237 CTGGTGCAGTGAGCCCGTT 62.832 63.158 0.00 0.00 44.83 4.44
2890 3143 2.345991 GGTGCAGTGAGCCCGTTA 59.654 61.111 0.00 0.00 44.83 3.18
2891 3144 1.741770 GGTGCAGTGAGCCCGTTAG 60.742 63.158 0.00 0.00 44.83 2.34
2892 3145 1.004918 GTGCAGTGAGCCCGTTAGT 60.005 57.895 0.00 0.00 44.83 2.24
2893 3146 1.005037 TGCAGTGAGCCCGTTAGTG 60.005 57.895 0.00 0.00 44.83 2.74
2894 3147 1.004918 GCAGTGAGCCCGTTAGTGT 60.005 57.895 0.00 0.00 37.23 3.55
2895 3148 0.602905 GCAGTGAGCCCGTTAGTGTT 60.603 55.000 0.00 0.00 37.23 3.32
2896 3149 1.148310 CAGTGAGCCCGTTAGTGTTG 58.852 55.000 0.00 0.00 0.00 3.33
2897 3150 0.602905 AGTGAGCCCGTTAGTGTTGC 60.603 55.000 0.00 0.00 0.00 4.17
2898 3151 0.882927 GTGAGCCCGTTAGTGTTGCA 60.883 55.000 0.00 0.00 0.00 4.08
2899 3152 0.179043 TGAGCCCGTTAGTGTTGCAA 60.179 50.000 0.00 0.00 0.00 4.08
2900 3153 1.165270 GAGCCCGTTAGTGTTGCAAT 58.835 50.000 0.59 0.00 0.00 3.56
2901 3154 1.539827 GAGCCCGTTAGTGTTGCAATT 59.460 47.619 0.59 0.00 0.00 2.32
2902 3155 2.745281 GAGCCCGTTAGTGTTGCAATTA 59.255 45.455 0.59 0.00 0.00 1.40
2903 3156 2.747446 AGCCCGTTAGTGTTGCAATTAG 59.253 45.455 0.59 0.00 0.00 1.73
2904 3157 2.745281 GCCCGTTAGTGTTGCAATTAGA 59.255 45.455 0.59 0.00 0.00 2.10
2905 3158 3.181510 GCCCGTTAGTGTTGCAATTAGAG 60.182 47.826 0.59 0.00 0.00 2.43
2906 3159 4.000988 CCCGTTAGTGTTGCAATTAGAGT 58.999 43.478 0.59 0.00 0.00 3.24
2907 3160 4.092968 CCCGTTAGTGTTGCAATTAGAGTC 59.907 45.833 0.59 0.00 0.00 3.36
2908 3161 4.201589 CCGTTAGTGTTGCAATTAGAGTCG 60.202 45.833 0.59 3.33 0.00 4.18
2909 3162 4.201589 CGTTAGTGTTGCAATTAGAGTCGG 60.202 45.833 0.59 0.00 0.00 4.79
2910 3163 2.699954 AGTGTTGCAATTAGAGTCGGG 58.300 47.619 0.59 0.00 0.00 5.14
2911 3164 2.301870 AGTGTTGCAATTAGAGTCGGGA 59.698 45.455 0.59 0.00 0.00 5.14
2912 3165 3.071479 GTGTTGCAATTAGAGTCGGGAA 58.929 45.455 0.59 0.00 0.00 3.97
2913 3166 3.500680 GTGTTGCAATTAGAGTCGGGAAA 59.499 43.478 0.59 0.00 0.00 3.13
2914 3167 3.751175 TGTTGCAATTAGAGTCGGGAAAG 59.249 43.478 0.59 0.00 0.00 2.62
2915 3168 3.973206 TGCAATTAGAGTCGGGAAAGA 57.027 42.857 0.00 0.00 0.00 2.52
2916 3169 4.280436 TGCAATTAGAGTCGGGAAAGAA 57.720 40.909 0.00 0.00 0.00 2.52
2917 3170 4.253685 TGCAATTAGAGTCGGGAAAGAAG 58.746 43.478 0.00 0.00 0.00 2.85
2918 3171 3.623510 GCAATTAGAGTCGGGAAAGAAGG 59.376 47.826 0.00 0.00 0.00 3.46
2919 3172 4.623171 GCAATTAGAGTCGGGAAAGAAGGA 60.623 45.833 0.00 0.00 0.00 3.36
2920 3173 5.488341 CAATTAGAGTCGGGAAAGAAGGAA 58.512 41.667 0.00 0.00 0.00 3.36
2921 3174 4.803098 TTAGAGTCGGGAAAGAAGGAAG 57.197 45.455 0.00 0.00 0.00 3.46
2922 3175 2.890814 AGAGTCGGGAAAGAAGGAAGA 58.109 47.619 0.00 0.00 0.00 2.87
2923 3176 3.445987 AGAGTCGGGAAAGAAGGAAGAT 58.554 45.455 0.00 0.00 0.00 2.40
2924 3177 3.449377 AGAGTCGGGAAAGAAGGAAGATC 59.551 47.826 0.00 0.00 0.00 2.75
2925 3178 2.502130 AGTCGGGAAAGAAGGAAGATCC 59.498 50.000 0.00 0.00 36.58 3.36
2926 3179 1.838077 TCGGGAAAGAAGGAAGATCCC 59.162 52.381 0.00 0.00 45.19 3.85
2927 3180 1.134068 CGGGAAAGAAGGAAGATCCCC 60.134 57.143 3.67 0.00 45.77 4.81
2928 3181 1.923148 GGGAAAGAAGGAAGATCCCCA 59.077 52.381 4.76 0.00 43.30 4.96
2929 3182 2.311841 GGGAAAGAAGGAAGATCCCCAA 59.688 50.000 4.76 0.00 43.30 4.12
2930 3183 3.625853 GGAAAGAAGGAAGATCCCCAAG 58.374 50.000 4.76 0.00 37.19 3.61
2931 3184 3.625853 GAAAGAAGGAAGATCCCCAAGG 58.374 50.000 4.76 0.00 37.19 3.61
2944 3197 3.881220 TCCCCAAGGAATACGTCATTTC 58.119 45.455 0.00 0.00 40.08 2.17
2954 3207 1.674359 ACGTCATTTCTGCCACAACA 58.326 45.000 0.00 0.00 0.00 3.33
2959 3212 3.983344 GTCATTTCTGCCACAACATTGTC 59.017 43.478 0.00 0.00 39.91 3.18
2969 3222 4.810491 GCCACAACATTGTCAAAAACTGAT 59.190 37.500 0.00 0.00 39.91 2.90
2971 3224 6.478344 GCCACAACATTGTCAAAAACTGATAA 59.522 34.615 0.00 0.00 39.91 1.75
2975 3228 9.814899 ACAACATTGTCAAAAACTGATAAATCA 57.185 25.926 0.00 0.00 38.49 2.57
2980 3233 8.870160 TTGTCAAAAACTGATAAATCACTTGG 57.130 30.769 0.00 0.00 36.14 3.61
2981 3234 7.432869 TGTCAAAAACTGATAAATCACTTGGG 58.567 34.615 0.00 0.00 36.14 4.12
2983 3236 6.553100 TCAAAAACTGATAAATCACTTGGGGT 59.447 34.615 0.00 0.00 32.50 4.95
2984 3237 5.982890 AAACTGATAAATCACTTGGGGTG 57.017 39.130 0.00 0.00 46.60 4.61
2985 3238 3.356290 ACTGATAAATCACTTGGGGTGC 58.644 45.455 0.00 0.00 44.98 5.01
2986 3239 3.010584 ACTGATAAATCACTTGGGGTGCT 59.989 43.478 0.00 0.00 44.98 4.40
2987 3240 3.355378 TGATAAATCACTTGGGGTGCTG 58.645 45.455 0.00 0.00 44.98 4.41
2988 3241 1.544724 TAAATCACTTGGGGTGCTGC 58.455 50.000 0.00 0.00 44.98 5.25
2989 3242 0.178953 AAATCACTTGGGGTGCTGCT 60.179 50.000 0.00 0.00 44.98 4.24
2990 3243 0.896940 AATCACTTGGGGTGCTGCTG 60.897 55.000 0.00 0.00 44.98 4.41
2991 3244 2.072874 ATCACTTGGGGTGCTGCTGT 62.073 55.000 0.00 0.00 44.98 4.40
2993 3246 0.537143 CACTTGGGGTGCTGCTGTTA 60.537 55.000 0.00 0.00 39.22 2.41
2994 3247 0.537371 ACTTGGGGTGCTGCTGTTAC 60.537 55.000 0.00 0.00 0.00 2.50
2995 3248 0.537143 CTTGGGGTGCTGCTGTTACA 60.537 55.000 0.00 0.00 0.00 2.41
2996 3249 0.106469 TTGGGGTGCTGCTGTTACAA 60.106 50.000 0.00 0.00 0.00 2.41
2999 3252 2.224892 TGGGGTGCTGCTGTTACAATTA 60.225 45.455 0.00 0.00 0.00 1.40
3000 3253 2.423538 GGGGTGCTGCTGTTACAATTAG 59.576 50.000 0.00 0.00 0.00 1.73
3002 3255 3.127030 GGGTGCTGCTGTTACAATTAGTC 59.873 47.826 0.00 0.00 0.00 2.59
3003 3256 3.127030 GGTGCTGCTGTTACAATTAGTCC 59.873 47.826 0.00 0.00 0.00 3.85
3004 3257 3.751175 GTGCTGCTGTTACAATTAGTCCA 59.249 43.478 0.00 0.00 0.00 4.02
3006 3259 4.003648 GCTGCTGTTACAATTAGTCCAGT 58.996 43.478 0.00 0.00 33.89 4.00
3007 3260 4.093556 GCTGCTGTTACAATTAGTCCAGTC 59.906 45.833 0.00 0.00 33.89 3.51
3008 3261 5.482908 CTGCTGTTACAATTAGTCCAGTCT 58.517 41.667 0.00 0.00 33.89 3.24
3009 3262 5.865085 TGCTGTTACAATTAGTCCAGTCTT 58.135 37.500 0.00 0.00 33.89 3.01
3010 3263 5.700832 TGCTGTTACAATTAGTCCAGTCTTG 59.299 40.000 0.00 0.00 33.89 3.02
3011 3264 5.701290 GCTGTTACAATTAGTCCAGTCTTGT 59.299 40.000 0.00 0.00 33.89 3.16
3013 3266 6.822442 TGTTACAATTAGTCCAGTCTTGTCA 58.178 36.000 0.00 0.00 32.66 3.58
3014 3267 7.276658 TGTTACAATTAGTCCAGTCTTGTCAA 58.723 34.615 0.00 0.00 32.66 3.18
3015 3268 7.771361 TGTTACAATTAGTCCAGTCTTGTCAAA 59.229 33.333 0.00 0.00 32.66 2.69
3016 3269 8.617809 GTTACAATTAGTCCAGTCTTGTCAAAA 58.382 33.333 0.00 0.00 32.66 2.44
3017 3270 7.639113 ACAATTAGTCCAGTCTTGTCAAAAA 57.361 32.000 0.00 0.00 0.00 1.94
3018 3271 7.480810 ACAATTAGTCCAGTCTTGTCAAAAAC 58.519 34.615 0.00 0.00 0.00 2.43
3019 3272 7.339466 ACAATTAGTCCAGTCTTGTCAAAAACT 59.661 33.333 0.00 0.00 0.00 2.66
3020 3273 6.677781 TTAGTCCAGTCTTGTCAAAAACTG 57.322 37.500 15.93 15.93 39.04 3.16
3021 3274 4.843728 AGTCCAGTCTTGTCAAAAACTGA 58.156 39.130 21.23 10.32 41.26 3.41
3023 3276 5.297776 AGTCCAGTCTTGTCAAAAACTGATG 59.702 40.000 21.23 11.00 41.26 3.07
3027 3280 7.068593 TCCAGTCTTGTCAAAAACTGATGATTT 59.931 33.333 21.23 0.00 41.26 2.17
3057 3444 6.485830 TCATCATTCTTCTAACCCTACCAG 57.514 41.667 0.00 0.00 0.00 4.00
3061 3448 4.341863 TTCTTCTAACCCTACCAGCCTA 57.658 45.455 0.00 0.00 0.00 3.93
3065 3452 1.761198 CTAACCCTACCAGCCTACCAC 59.239 57.143 0.00 0.00 0.00 4.16
3066 3453 0.912968 AACCCTACCAGCCTACCACC 60.913 60.000 0.00 0.00 0.00 4.61
3067 3454 1.003051 CCCTACCAGCCTACCACCT 59.997 63.158 0.00 0.00 0.00 4.00
3097 3484 3.593442 TCTCCATTCAACAACCAACCT 57.407 42.857 0.00 0.00 0.00 3.50
3099 3486 4.394729 TCTCCATTCAACAACCAACCTAC 58.605 43.478 0.00 0.00 0.00 3.18
3100 3487 4.104102 TCTCCATTCAACAACCAACCTACT 59.896 41.667 0.00 0.00 0.00 2.57
3102 3489 3.506067 CCATTCAACAACCAACCTACTCC 59.494 47.826 0.00 0.00 0.00 3.85
3110 3497 2.753247 ACCAACCTACTCCTCTCCATC 58.247 52.381 0.00 0.00 0.00 3.51
3118 3505 0.743688 CTCCTCTCCATCCAGTCACG 59.256 60.000 0.00 0.00 0.00 4.35
3120 3507 0.457851 CCTCTCCATCCAGTCACGAC 59.542 60.000 0.00 0.00 0.00 4.34
3127 3514 2.069273 CATCCAGTCACGACCAAACTC 58.931 52.381 0.00 0.00 0.00 3.01
3130 3517 2.093394 TCCAGTCACGACCAAACTCAAA 60.093 45.455 0.00 0.00 0.00 2.69
3131 3518 2.680841 CCAGTCACGACCAAACTCAAAA 59.319 45.455 0.00 0.00 0.00 2.44
3133 3520 3.621268 CAGTCACGACCAAACTCAAAAGA 59.379 43.478 0.00 0.00 0.00 2.52
3140 3527 3.296854 ACCAAACTCAAAAGAAGGGACC 58.703 45.455 0.00 0.00 0.00 4.46
3142 3529 2.628178 CAAACTCAAAAGAAGGGACCCC 59.372 50.000 7.00 1.17 0.00 4.95
3168 3557 5.050499 CACTCGCAATATTCACATCTTCTCC 60.050 44.000 0.00 0.00 0.00 3.71
3174 3563 6.687393 GCAATATTCACATCTTCTCCTCCTCA 60.687 42.308 0.00 0.00 0.00 3.86
3189 3578 6.047240 TCTCCTCCTCATTCCTTCCATATCTA 59.953 42.308 0.00 0.00 0.00 1.98
3190 3579 6.820205 TCCTCCTCATTCCTTCCATATCTAT 58.180 40.000 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.215399 TGAAGCCCACAAGAAGTTAAATCG 59.785 41.667 0.00 0.00 0.00 3.34
18 19 2.575532 TGTTCTGAAGCCCACAAGAAG 58.424 47.619 0.00 0.00 0.00 2.85
76 77 1.963985 AATCAAGGGTGAGGCTCTCT 58.036 50.000 16.72 7.83 37.14 3.10
96 97 5.945784 CCAAGAGATGTGTTGAAGGGATTTA 59.054 40.000 0.78 0.00 0.00 1.40
100 101 2.978978 TCCAAGAGATGTGTTGAAGGGA 59.021 45.455 0.78 0.00 0.00 4.20
101 102 3.341823 CTCCAAGAGATGTGTTGAAGGG 58.658 50.000 0.78 0.00 0.00 3.95
140 141 0.842635 CCTTGGAGGCTAGGCAGATT 59.157 55.000 19.70 0.00 0.00 2.40
165 166 1.205893 GGATTCCGCAGCTAGATAGGG 59.794 57.143 0.00 0.00 0.00 3.53
185 186 1.097547 GCGTCAGGGATTGGACCATG 61.098 60.000 0.00 0.00 42.18 3.66
231 232 4.279169 ACATGTTGAAACCAAGATCCAGTG 59.721 41.667 0.00 0.00 0.00 3.66
236 237 5.916883 CAGTGAACATGTTGAAACCAAGATC 59.083 40.000 17.58 0.00 0.00 2.75
246 248 4.019792 ACTATGCCAGTGAACATGTTGA 57.980 40.909 17.58 4.23 35.62 3.18
273 275 6.799512 AGTTTCTTCTGTTTCTTGATGGTTG 58.200 36.000 0.00 0.00 0.00 3.77
278 280 9.788960 GTTTTGTAGTTTCTTCTGTTTCTTGAT 57.211 29.630 0.00 0.00 0.00 2.57
288 290 7.175119 GCAATAGGAGGTTTTGTAGTTTCTTCT 59.825 37.037 0.00 0.00 0.00 2.85
302 304 4.910458 AGTTGTAGTGCAATAGGAGGTT 57.090 40.909 0.00 0.00 39.55 3.50
304 306 4.832248 TGAAGTTGTAGTGCAATAGGAGG 58.168 43.478 0.00 0.00 39.55 4.30
308 310 7.132694 TGTTGATGAAGTTGTAGTGCAATAG 57.867 36.000 0.00 0.00 39.55 1.73
368 370 7.215789 TCCAAAAACAGCACATACAATTCATT 58.784 30.769 0.00 0.00 0.00 2.57
377 379 5.452636 GGTTTTCCTCCAAAAACAGCACATA 60.453 40.000 12.64 0.00 46.28 2.29
397 399 2.683211 AGCTCCCTGTCAAATGGTTT 57.317 45.000 0.00 0.00 0.00 3.27
401 403 3.012518 CTGGTAAGCTCCCTGTCAAATG 58.987 50.000 4.21 0.00 0.00 2.32
426 428 1.630878 AGTTGCTAAAGTGCCCTAGCT 59.369 47.619 0.00 0.00 40.99 3.32
454 456 3.303725 GCTTGTTGTTGTCGAGTGCAATA 60.304 43.478 0.00 0.00 0.00 1.90
457 459 0.376852 GCTTGTTGTTGTCGAGTGCA 59.623 50.000 0.00 0.00 0.00 4.57
459 461 3.063997 AGAAAGCTTGTTGTTGTCGAGTG 59.936 43.478 0.00 0.00 0.00 3.51
460 462 3.063997 CAGAAAGCTTGTTGTTGTCGAGT 59.936 43.478 0.00 0.00 0.00 4.18
526 528 4.652421 AGGTTGTTGGAGGTTAGCGATATA 59.348 41.667 0.00 0.00 0.00 0.86
527 529 3.454812 AGGTTGTTGGAGGTTAGCGATAT 59.545 43.478 0.00 0.00 0.00 1.63
671 765 5.814764 ATGCAAGATCTAAAGTCTGCTTG 57.185 39.130 14.22 0.00 34.71 4.01
736 830 8.578308 TTGTGTTTGAAACATCAAGATCAATC 57.422 30.769 14.40 0.00 44.35 2.67
740 834 5.978919 TGCTTGTGTTTGAAACATCAAGATC 59.021 36.000 32.58 23.82 44.25 2.75
815 909 3.989817 GCAAGCCGATTTCTTGACAAATT 59.010 39.130 6.89 0.00 42.52 1.82
837 931 3.181483 GGAAAATGTAGGAAGCATGCCAG 60.181 47.826 15.66 0.00 34.43 4.85
930 1025 3.835395 AGAGGTCCAAGAAGACTAGGTTG 59.165 47.826 0.00 0.00 36.95 3.77
937 1032 2.530701 TCCAGAGAGGTCCAAGAAGAC 58.469 52.381 0.00 0.00 39.02 3.01
973 1068 3.260380 GCTCCTATATCTGATGGCAGTGT 59.740 47.826 0.00 0.00 42.84 3.55
1043 1141 4.126524 GCACGGAGCAGGGAATAC 57.873 61.111 0.00 0.00 44.79 1.89
1057 1155 2.349817 CCAATCGTTGTGACTGAAGCAC 60.350 50.000 0.00 0.00 36.81 4.40
1068 1166 6.295719 AGGTCTAGAAATACCAATCGTTGT 57.704 37.500 0.00 0.00 38.30 3.32
1115 1213 1.391157 GCGAGGGCAATTGGGCAATA 61.391 55.000 7.72 0.00 45.66 1.90
1157 1255 9.463443 GATTGTTACTGTTCAAATTAAGCAAGT 57.537 29.630 0.00 0.00 0.00 3.16
1167 1265 7.468631 GCTCCTGAAAGATTGTTACTGTTCAAA 60.469 37.037 0.00 0.00 34.07 2.69
1222 1322 9.120538 GTATGCCAGATTCAGAAATTTTAGGTA 57.879 33.333 0.00 0.00 0.00 3.08
1263 1363 4.666512 ACTCAATCCATGTTGGTAAGCTT 58.333 39.130 3.48 3.48 39.03 3.74
1315 1415 1.061799 GAGAACACATTTGCGCGCAG 61.062 55.000 34.25 24.73 0.00 5.18
1321 1421 1.336240 GCCACCAGAGAACACATTTGC 60.336 52.381 0.00 0.00 0.00 3.68
1419 1519 1.084370 CGAGATTCCCAAGTGACCGC 61.084 60.000 0.00 0.00 0.00 5.68
1449 1608 6.483640 GGCCACCACTATAATTGAAAGTAGAG 59.516 42.308 0.00 0.00 0.00 2.43
1457 1616 4.638421 CGAAAAGGCCACCACTATAATTGA 59.362 41.667 5.01 0.00 0.00 2.57
1462 1621 2.093341 GGTCGAAAAGGCCACCACTATA 60.093 50.000 5.01 0.00 46.14 1.31
1500 1674 4.584325 GCATAAATGGAATCCACTAAGCCA 59.416 41.667 3.09 0.00 35.80 4.75
1505 1679 7.083062 AGATGAGCATAAATGGAATCCACTA 57.917 36.000 3.09 0.00 35.80 2.74
1507 1681 6.263842 TCAAGATGAGCATAAATGGAATCCAC 59.736 38.462 3.09 0.00 35.80 4.02
1529 1714 9.710979 CTTTTACGTTGACAAAGAAACTATCAA 57.289 29.630 8.17 0.00 30.31 2.57
1539 1724 7.327518 AGTTTTTGACCTTTTACGTTGACAAAG 59.672 33.333 0.00 0.00 0.00 2.77
1542 1727 6.256912 AGTTTTTGACCTTTTACGTTGACA 57.743 33.333 0.00 0.00 0.00 3.58
1545 1730 7.749539 ATCAAGTTTTTGACCTTTTACGTTG 57.250 32.000 0.00 0.00 45.54 4.10
1561 1746 6.039382 GCGATCCCTTTGGTATAATCAAGTTT 59.961 38.462 0.00 0.00 0.00 2.66
1569 1754 5.554437 TGTATGCGATCCCTTTGGTATAA 57.446 39.130 0.00 0.00 0.00 0.98
1602 1787 6.397272 TGTCAAACTGTTGCAAGAAAAATCT 58.603 32.000 0.00 0.00 34.50 2.40
1652 1840 7.814587 AGTTTAAGTTCTTTAATGCAATGAGCC 59.185 33.333 0.00 0.00 44.83 4.70
1812 2000 8.588472 AGATCATTATATGACAGGTTCAATCGA 58.412 33.333 0.00 0.00 43.01 3.59
1856 2044 7.027874 TCTAGTGTTCTTAATTGGTTCCCAT 57.972 36.000 0.00 0.00 31.53 4.00
1911 2099 3.773119 GGAGAGGTGGACCACATAAACTA 59.227 47.826 25.75 0.00 38.89 2.24
1912 2100 2.572104 GGAGAGGTGGACCACATAAACT 59.428 50.000 25.75 12.50 38.89 2.66
1915 2103 1.203376 TGGGAGAGGTGGACCACATAA 60.203 52.381 25.75 0.84 38.89 1.90
1960 2148 3.090952 CTCTTGAGGAGCATACGGAAG 57.909 52.381 0.00 0.00 35.08 3.46
1986 2174 6.147821 ACAAAACTACATCACTCATTCCTTCG 59.852 38.462 0.00 0.00 0.00 3.79
2004 2192 5.106157 GCACATGCTGAGGTATAACAAAACT 60.106 40.000 0.00 0.00 38.21 2.66
2009 2197 3.625649 TGCACATGCTGAGGTATAACA 57.374 42.857 5.31 0.00 42.66 2.41
2076 2264 2.041755 ACCAACCCTCCATTTCCTCTTC 59.958 50.000 0.00 0.00 0.00 2.87
2105 2293 6.038492 TCGATCATACACGTGGTCTGTAAATA 59.962 38.462 21.57 0.00 0.00 1.40
2119 2307 2.468040 GCACGTAAGCTCGATCATACAC 59.532 50.000 1.33 0.00 45.62 2.90
2145 2333 0.916358 ATGAAGCCCACCCTACAGCT 60.916 55.000 0.00 0.00 37.10 4.24
2151 2339 2.037847 GCCAATGAAGCCCACCCT 59.962 61.111 0.00 0.00 0.00 4.34
2154 2342 0.968405 TTCTTGCCAATGAAGCCCAC 59.032 50.000 0.00 0.00 0.00 4.61
2237 2471 5.308014 ACACACAGCAATGATTACTGAAGA 58.692 37.500 12.12 0.00 35.38 2.87
2243 2477 5.883661 AGCATTACACACAGCAATGATTAC 58.116 37.500 0.00 0.00 32.54 1.89
2253 2489 4.516698 ACCAAAGAAGAGCATTACACACAG 59.483 41.667 0.00 0.00 0.00 3.66
2338 2574 8.192774 CCTTGTAGAGTATTCGGTTTATACACA 58.807 37.037 0.00 0.00 32.18 3.72
2360 2601 1.548269 ACAACAAACACACACCCCTTG 59.452 47.619 0.00 0.00 0.00 3.61
2367 2613 3.181475 ACCACAACAACAACAAACACACA 60.181 39.130 0.00 0.00 0.00 3.72
2398 2644 9.786105 GGTATCAGTCTCAAGTAACTAACTAAC 57.214 37.037 0.00 0.00 37.50 2.34
2399 2645 9.750783 AGGTATCAGTCTCAAGTAACTAACTAA 57.249 33.333 0.00 0.00 37.50 2.24
2401 2647 9.924010 ATAGGTATCAGTCTCAAGTAACTAACT 57.076 33.333 0.00 0.00 41.49 2.24
2430 2681 7.016661 AGCTTTATCCACACCTTAGCTATACAT 59.983 37.037 0.00 0.00 35.87 2.29
2550 2803 0.679960 AAGTGGCCCCGAAAGCATAC 60.680 55.000 0.00 0.00 0.00 2.39
2568 2821 7.014449 TGATATAGATACGGAAGAAAGGGGAA 58.986 38.462 0.00 0.00 0.00 3.97
2571 2824 8.531982 TGAATGATATAGATACGGAAGAAAGGG 58.468 37.037 0.00 0.00 0.00 3.95
2574 2827 9.875691 CCATGAATGATATAGATACGGAAGAAA 57.124 33.333 0.00 0.00 0.00 2.52
2575 2828 9.035890 ACCATGAATGATATAGATACGGAAGAA 57.964 33.333 0.00 0.00 0.00 2.52
2576 2829 8.595362 ACCATGAATGATATAGATACGGAAGA 57.405 34.615 0.00 0.00 0.00 2.87
2577 2830 9.091784 CAACCATGAATGATATAGATACGGAAG 57.908 37.037 0.00 0.00 0.00 3.46
2578 2831 8.040727 CCAACCATGAATGATATAGATACGGAA 58.959 37.037 0.00 0.00 0.00 4.30
2579 2832 7.180229 ACCAACCATGAATGATATAGATACGGA 59.820 37.037 0.00 0.00 0.00 4.69
2580 2833 7.331026 ACCAACCATGAATGATATAGATACGG 58.669 38.462 0.00 0.00 0.00 4.02
2581 2834 8.777865 AACCAACCATGAATGATATAGATACG 57.222 34.615 0.00 0.00 0.00 3.06
2585 2838 9.066892 GCTTAAACCAACCATGAATGATATAGA 57.933 33.333 0.00 0.00 0.00 1.98
2586 2839 9.071276 AGCTTAAACCAACCATGAATGATATAG 57.929 33.333 0.00 0.00 0.00 1.31
2587 2840 8.995027 AGCTTAAACCAACCATGAATGATATA 57.005 30.769 0.00 0.00 0.00 0.86
2588 2841 7.781693 AGAGCTTAAACCAACCATGAATGATAT 59.218 33.333 0.00 0.00 0.00 1.63
2589 2842 7.118723 AGAGCTTAAACCAACCATGAATGATA 58.881 34.615 0.00 0.00 0.00 2.15
2590 2843 5.954150 AGAGCTTAAACCAACCATGAATGAT 59.046 36.000 0.00 0.00 0.00 2.45
2591 2844 5.324409 AGAGCTTAAACCAACCATGAATGA 58.676 37.500 0.00 0.00 0.00 2.57
2592 2845 5.649782 AGAGCTTAAACCAACCATGAATG 57.350 39.130 0.00 0.00 0.00 2.67
2593 2846 7.397192 ACATAAGAGCTTAAACCAACCATGAAT 59.603 33.333 0.00 0.00 0.00 2.57
2594 2847 6.719370 ACATAAGAGCTTAAACCAACCATGAA 59.281 34.615 0.00 0.00 0.00 2.57
2595 2848 6.245408 ACATAAGAGCTTAAACCAACCATGA 58.755 36.000 0.00 0.00 0.00 3.07
2596 2849 6.515272 ACATAAGAGCTTAAACCAACCATG 57.485 37.500 0.00 0.00 0.00 3.66
2597 2850 6.493458 ACAACATAAGAGCTTAAACCAACCAT 59.507 34.615 0.00 0.00 0.00 3.55
2598 2851 5.830991 ACAACATAAGAGCTTAAACCAACCA 59.169 36.000 0.00 0.00 0.00 3.67
2599 2852 6.327279 ACAACATAAGAGCTTAAACCAACC 57.673 37.500 0.00 0.00 0.00 3.77
2600 2853 8.319143 TCTACAACATAAGAGCTTAAACCAAC 57.681 34.615 0.00 0.00 0.00 3.77
2601 2854 8.547967 CTCTACAACATAAGAGCTTAAACCAA 57.452 34.615 0.00 0.00 33.36 3.67
2614 2867 6.395629 GTTGAGTGTAGGCTCTACAACATAA 58.604 40.000 14.26 7.23 39.70 1.90
2616 2869 4.322801 GGTTGAGTGTAGGCTCTACAACAT 60.323 45.833 14.26 6.29 40.98 2.71
2619 2872 2.565834 GGGTTGAGTGTAGGCTCTACAA 59.434 50.000 14.26 0.55 40.98 2.41
2620 2873 2.176889 GGGTTGAGTGTAGGCTCTACA 58.823 52.381 10.03 10.03 40.98 2.74
2621 2874 1.481363 GGGGTTGAGTGTAGGCTCTAC 59.519 57.143 0.00 5.65 39.38 2.59
2623 2876 0.178903 TGGGGTTGAGTGTAGGCTCT 60.179 55.000 0.00 0.00 36.51 4.09
2629 2882 1.697432 CCAGAGTTGGGGTTGAGTGTA 59.303 52.381 0.00 0.00 41.05 2.90
2641 2894 5.009310 GGTTTGGGTTAGTTTACCAGAGTTG 59.991 44.000 0.00 0.00 40.09 3.16
2642 2895 5.135383 GGTTTGGGTTAGTTTACCAGAGTT 58.865 41.667 0.00 0.00 40.09 3.01
2643 2896 4.166531 TGGTTTGGGTTAGTTTACCAGAGT 59.833 41.667 0.00 0.00 40.09 3.24
2645 2898 4.463070 GTGGTTTGGGTTAGTTTACCAGA 58.537 43.478 0.00 0.00 40.09 3.86
2646 2899 3.251487 CGTGGTTTGGGTTAGTTTACCAG 59.749 47.826 0.00 0.00 40.09 4.00
2647 2900 3.118112 TCGTGGTTTGGGTTAGTTTACCA 60.118 43.478 0.00 0.00 40.09 3.25
2648 2901 3.475575 TCGTGGTTTGGGTTAGTTTACC 58.524 45.455 0.00 0.00 37.47 2.85
2649 2902 4.083164 CCATCGTGGTTTGGGTTAGTTTAC 60.083 45.833 0.00 0.00 31.35 2.01
2650 2903 4.073549 CCATCGTGGTTTGGGTTAGTTTA 58.926 43.478 0.00 0.00 31.35 2.01
2651 2904 2.888414 CCATCGTGGTTTGGGTTAGTTT 59.112 45.455 0.00 0.00 31.35 2.66
2652 2905 2.510613 CCATCGTGGTTTGGGTTAGTT 58.489 47.619 0.00 0.00 31.35 2.24
2653 2906 1.271707 CCCATCGTGGTTTGGGTTAGT 60.272 52.381 0.00 0.00 46.38 2.24
2654 2907 1.459450 CCCATCGTGGTTTGGGTTAG 58.541 55.000 0.00 0.00 46.38 2.34
2655 2908 3.654517 CCCATCGTGGTTTGGGTTA 57.345 52.632 0.00 0.00 46.38 2.85
2656 2909 4.511838 CCCATCGTGGTTTGGGTT 57.488 55.556 0.00 0.00 46.38 4.11
2659 2912 1.165270 GTCTTCCCATCGTGGTTTGG 58.835 55.000 3.82 0.00 35.17 3.28
2660 2913 1.535462 GTGTCTTCCCATCGTGGTTTG 59.465 52.381 3.82 0.00 35.17 2.93
2661 2914 1.544759 GGTGTCTTCCCATCGTGGTTT 60.545 52.381 3.82 0.00 35.17 3.27
2662 2915 0.036306 GGTGTCTTCCCATCGTGGTT 59.964 55.000 3.82 0.00 35.17 3.67
2663 2916 0.836400 AGGTGTCTTCCCATCGTGGT 60.836 55.000 3.82 0.00 35.17 4.16
2664 2917 0.108138 GAGGTGTCTTCCCATCGTGG 60.108 60.000 0.00 0.00 37.25 4.94
2665 2918 0.458543 CGAGGTGTCTTCCCATCGTG 60.459 60.000 0.00 0.00 0.00 4.35
2666 2919 0.611062 TCGAGGTGTCTTCCCATCGT 60.611 55.000 0.00 0.00 0.00 3.73
2667 2920 0.747255 ATCGAGGTGTCTTCCCATCG 59.253 55.000 0.00 0.00 0.00 3.84
2668 2921 1.202580 CCATCGAGGTGTCTTCCCATC 60.203 57.143 0.00 0.00 0.00 3.51
2669 2922 0.833287 CCATCGAGGTGTCTTCCCAT 59.167 55.000 0.00 0.00 0.00 4.00
2670 2923 1.899437 GCCATCGAGGTGTCTTCCCA 61.899 60.000 0.00 0.00 40.61 4.37
2671 2924 1.153349 GCCATCGAGGTGTCTTCCC 60.153 63.158 0.00 0.00 40.61 3.97
2672 2925 0.179097 GAGCCATCGAGGTGTCTTCC 60.179 60.000 0.00 0.00 40.61 3.46
2673 2926 0.532573 TGAGCCATCGAGGTGTCTTC 59.467 55.000 0.00 0.00 40.61 2.87
2674 2927 0.976641 TTGAGCCATCGAGGTGTCTT 59.023 50.000 0.00 0.00 40.61 3.01
2675 2928 0.976641 TTTGAGCCATCGAGGTGTCT 59.023 50.000 0.00 0.00 40.61 3.41
2676 2929 1.734465 CTTTTGAGCCATCGAGGTGTC 59.266 52.381 0.00 0.00 40.61 3.67
2677 2930 1.347707 TCTTTTGAGCCATCGAGGTGT 59.652 47.619 0.00 0.00 40.61 4.16
2678 2931 2.099141 TCTTTTGAGCCATCGAGGTG 57.901 50.000 0.00 0.00 40.61 4.00
2679 2932 2.303022 TCTTCTTTTGAGCCATCGAGGT 59.697 45.455 0.00 0.00 40.61 3.85
2680 2933 2.675348 GTCTTCTTTTGAGCCATCGAGG 59.325 50.000 0.00 0.00 41.84 4.63
2681 2934 3.124297 GTGTCTTCTTTTGAGCCATCGAG 59.876 47.826 0.00 0.00 0.00 4.04
2682 2935 3.067106 GTGTCTTCTTTTGAGCCATCGA 58.933 45.455 0.00 0.00 0.00 3.59
2683 2936 2.807967 TGTGTCTTCTTTTGAGCCATCG 59.192 45.455 0.00 0.00 0.00 3.84
2684 2937 4.456911 TCATGTGTCTTCTTTTGAGCCATC 59.543 41.667 0.00 0.00 0.00 3.51
2685 2938 4.401022 TCATGTGTCTTCTTTTGAGCCAT 58.599 39.130 0.00 0.00 0.00 4.40
2686 2939 3.819368 TCATGTGTCTTCTTTTGAGCCA 58.181 40.909 0.00 0.00 0.00 4.75
2687 2940 4.036734 TGTTCATGTGTCTTCTTTTGAGCC 59.963 41.667 0.00 0.00 0.00 4.70
2688 2941 5.173774 TGTTCATGTGTCTTCTTTTGAGC 57.826 39.130 0.00 0.00 0.00 4.26
2689 2942 7.253883 GCTTTTGTTCATGTGTCTTCTTTTGAG 60.254 37.037 0.00 0.00 0.00 3.02
2690 2943 6.531240 GCTTTTGTTCATGTGTCTTCTTTTGA 59.469 34.615 0.00 0.00 0.00 2.69
2691 2944 6.532657 AGCTTTTGTTCATGTGTCTTCTTTTG 59.467 34.615 0.00 0.00 0.00 2.44
2692 2945 6.633856 AGCTTTTGTTCATGTGTCTTCTTTT 58.366 32.000 0.00 0.00 0.00 2.27
2693 2946 6.212888 AGCTTTTGTTCATGTGTCTTCTTT 57.787 33.333 0.00 0.00 0.00 2.52
2694 2947 5.841957 AGCTTTTGTTCATGTGTCTTCTT 57.158 34.783 0.00 0.00 0.00 2.52
2695 2948 5.357878 TGAAGCTTTTGTTCATGTGTCTTCT 59.642 36.000 0.00 0.00 0.00 2.85
2696 2949 5.581605 TGAAGCTTTTGTTCATGTGTCTTC 58.418 37.500 0.00 0.00 0.00 2.87
2697 2950 5.126061 ACTGAAGCTTTTGTTCATGTGTCTT 59.874 36.000 0.00 0.00 33.49 3.01
2698 2951 4.641989 ACTGAAGCTTTTGTTCATGTGTCT 59.358 37.500 0.00 0.00 33.49 3.41
2699 2952 4.925068 ACTGAAGCTTTTGTTCATGTGTC 58.075 39.130 0.00 0.00 33.49 3.67
2700 2953 4.989279 ACTGAAGCTTTTGTTCATGTGT 57.011 36.364 0.00 0.00 33.49 3.72
2701 2954 5.501252 GCAAACTGAAGCTTTTGTTCATGTG 60.501 40.000 15.21 11.79 35.51 3.21
2702 2955 4.567959 GCAAACTGAAGCTTTTGTTCATGT 59.432 37.500 15.21 1.66 35.51 3.21
2703 2956 4.807304 AGCAAACTGAAGCTTTTGTTCATG 59.193 37.500 15.21 12.55 38.01 3.07
2704 2957 5.014808 AGCAAACTGAAGCTTTTGTTCAT 57.985 34.783 15.21 2.55 38.01 2.57
2705 2958 4.454728 AGCAAACTGAAGCTTTTGTTCA 57.545 36.364 15.21 2.27 38.01 3.18
2718 2971 4.346734 CTGCTACAATACCAGCAAACTG 57.653 45.455 0.00 0.00 46.55 3.16
2725 2978 0.652592 GCGTGCTGCTACAATACCAG 59.347 55.000 0.00 0.00 41.73 4.00
2726 2979 1.081556 CGCGTGCTGCTACAATACCA 61.082 55.000 0.00 0.00 43.27 3.25
2727 2980 1.636340 CGCGTGCTGCTACAATACC 59.364 57.895 0.00 0.00 43.27 2.73
2728 2981 1.012234 GCGCGTGCTGCTACAATAC 60.012 57.895 15.02 0.00 43.27 1.89
2729 2982 3.394588 GCGCGTGCTGCTACAATA 58.605 55.556 15.02 0.00 43.27 1.90
2745 2998 1.376424 TGCCAGCTTCAGCACTAGC 60.376 57.895 0.75 0.00 45.16 3.42
2750 3003 1.228337 ATGTGTGCCAGCTTCAGCA 60.228 52.632 0.75 0.00 45.16 4.41
2751 3004 1.211969 CATGTGTGCCAGCTTCAGC 59.788 57.895 0.00 0.00 42.49 4.26
2752 3005 0.956633 AACATGTGTGCCAGCTTCAG 59.043 50.000 0.00 0.00 0.00 3.02
2753 3006 1.067364 CAAACATGTGTGCCAGCTTCA 59.933 47.619 2.32 0.00 0.00 3.02
2754 3007 1.337703 TCAAACATGTGTGCCAGCTTC 59.662 47.619 11.46 0.00 0.00 3.86
2755 3008 1.338973 CTCAAACATGTGTGCCAGCTT 59.661 47.619 11.46 0.00 0.00 3.74
2756 3009 0.956633 CTCAAACATGTGTGCCAGCT 59.043 50.000 11.46 0.00 0.00 4.24
2757 3010 0.953727 TCTCAAACATGTGTGCCAGC 59.046 50.000 11.46 0.00 0.00 4.85
2758 3011 1.068748 GCTCTCAAACATGTGTGCCAG 60.069 52.381 11.46 9.93 0.00 4.85
2759 3012 0.953727 GCTCTCAAACATGTGTGCCA 59.046 50.000 11.46 0.00 0.00 4.92
2760 3013 0.242017 GGCTCTCAAACATGTGTGCC 59.758 55.000 11.46 10.72 35.69 5.01
2761 3014 1.198637 GAGGCTCTCAAACATGTGTGC 59.801 52.381 11.46 5.36 0.00 4.57
2762 3015 2.497138 TGAGGCTCTCAAACATGTGTG 58.503 47.619 16.72 9.97 37.57 3.82
2763 3016 2.936919 TGAGGCTCTCAAACATGTGT 57.063 45.000 16.72 0.00 37.57 3.72
2781 3034 9.384682 GTTTTGAATGCACTCCAAAATATTTTG 57.615 29.630 27.09 27.09 45.34 2.44
2782 3035 8.567104 GGTTTTGAATGCACTCCAAAATATTTT 58.433 29.630 19.08 7.64 40.46 1.82
2783 3036 7.718753 TGGTTTTGAATGCACTCCAAAATATTT 59.281 29.630 19.08 0.00 40.46 1.40
2784 3037 7.222872 TGGTTTTGAATGCACTCCAAAATATT 58.777 30.769 19.08 0.00 40.46 1.28
2785 3038 6.767456 TGGTTTTGAATGCACTCCAAAATAT 58.233 32.000 19.08 0.00 40.46 1.28
2786 3039 6.166984 TGGTTTTGAATGCACTCCAAAATA 57.833 33.333 19.08 12.25 40.46 1.40
2787 3040 5.033589 TGGTTTTGAATGCACTCCAAAAT 57.966 34.783 19.08 0.00 40.46 1.82
2788 3041 4.478206 TGGTTTTGAATGCACTCCAAAA 57.522 36.364 14.76 14.76 37.42 2.44
2789 3042 4.686191 ATGGTTTTGAATGCACTCCAAA 57.314 36.364 0.00 0.00 0.00 3.28
2790 3043 4.686191 AATGGTTTTGAATGCACTCCAA 57.314 36.364 0.00 0.00 0.00 3.53
2791 3044 5.999205 ATAATGGTTTTGAATGCACTCCA 57.001 34.783 0.00 0.00 0.00 3.86
2792 3045 7.283127 TCTCTATAATGGTTTTGAATGCACTCC 59.717 37.037 0.00 0.00 0.00 3.85
2793 3046 8.125448 GTCTCTATAATGGTTTTGAATGCACTC 58.875 37.037 0.00 0.00 0.00 3.51
2794 3047 7.831193 AGTCTCTATAATGGTTTTGAATGCACT 59.169 33.333 0.00 0.00 0.00 4.40
2795 3048 7.912250 CAGTCTCTATAATGGTTTTGAATGCAC 59.088 37.037 0.00 0.00 0.00 4.57
2796 3049 7.415541 GCAGTCTCTATAATGGTTTTGAATGCA 60.416 37.037 0.00 0.00 41.72 3.96
2797 3050 6.914757 GCAGTCTCTATAATGGTTTTGAATGC 59.085 38.462 0.00 0.00 37.18 3.56
2798 3051 7.067372 TGGCAGTCTCTATAATGGTTTTGAATG 59.933 37.037 0.00 0.00 0.00 2.67
2799 3052 7.118723 TGGCAGTCTCTATAATGGTTTTGAAT 58.881 34.615 0.00 0.00 0.00 2.57
2800 3053 6.480763 TGGCAGTCTCTATAATGGTTTTGAA 58.519 36.000 0.00 0.00 0.00 2.69
2801 3054 6.061022 TGGCAGTCTCTATAATGGTTTTGA 57.939 37.500 0.00 0.00 0.00 2.69
2802 3055 6.949352 ATGGCAGTCTCTATAATGGTTTTG 57.051 37.500 0.00 0.00 0.00 2.44
2803 3056 7.349598 AGAATGGCAGTCTCTATAATGGTTTT 58.650 34.615 12.35 0.00 0.00 2.43
2804 3057 6.904626 AGAATGGCAGTCTCTATAATGGTTT 58.095 36.000 12.35 0.00 0.00 3.27
2805 3058 6.506538 AGAATGGCAGTCTCTATAATGGTT 57.493 37.500 12.35 0.00 0.00 3.67
2806 3059 7.013220 TCTAGAATGGCAGTCTCTATAATGGT 58.987 38.462 21.98 0.00 0.00 3.55
2807 3060 7.178274 ACTCTAGAATGGCAGTCTCTATAATGG 59.822 40.741 21.98 6.84 0.00 3.16
2808 3061 8.121305 ACTCTAGAATGGCAGTCTCTATAATG 57.879 38.462 21.98 8.29 0.00 1.90
2809 3062 8.170061 AGACTCTAGAATGGCAGTCTCTATAAT 58.830 37.037 21.98 3.48 41.47 1.28
2810 3063 7.522542 AGACTCTAGAATGGCAGTCTCTATAA 58.477 38.462 21.98 2.20 41.47 0.98
2811 3064 7.085476 AGACTCTAGAATGGCAGTCTCTATA 57.915 40.000 21.98 2.61 41.47 1.31
2812 3065 5.952387 AGACTCTAGAATGGCAGTCTCTAT 58.048 41.667 21.98 5.70 41.47 1.98
2813 3066 5.381184 AGACTCTAGAATGGCAGTCTCTA 57.619 43.478 21.98 11.54 41.47 2.43
2814 3067 4.249638 AGACTCTAGAATGGCAGTCTCT 57.750 45.455 21.98 9.25 41.47 3.10
2815 3068 5.337578 AAAGACTCTAGAATGGCAGTCTC 57.662 43.478 21.98 6.88 43.92 3.36
2816 3069 5.753721 AAAAGACTCTAGAATGGCAGTCT 57.246 39.130 22.00 22.00 46.13 3.24
2844 3097 9.186837 TGAGTAGATTCTCTAAAACGGTATTCT 57.813 33.333 0.00 0.00 35.68 2.40
2845 3098 9.235537 GTGAGTAGATTCTCTAAAACGGTATTC 57.764 37.037 0.00 0.00 35.68 1.75
2846 3099 8.968969 AGTGAGTAGATTCTCTAAAACGGTATT 58.031 33.333 0.00 0.00 35.68 1.89
2847 3100 8.407064 CAGTGAGTAGATTCTCTAAAACGGTAT 58.593 37.037 0.00 0.00 35.68 2.73
2848 3101 7.148120 CCAGTGAGTAGATTCTCTAAAACGGTA 60.148 40.741 0.00 0.00 35.68 4.02
2849 3102 6.350277 CCAGTGAGTAGATTCTCTAAAACGGT 60.350 42.308 0.00 0.00 35.68 4.83
2850 3103 6.037098 CCAGTGAGTAGATTCTCTAAAACGG 58.963 44.000 0.00 0.00 35.68 4.44
2851 3104 6.528423 CACCAGTGAGTAGATTCTCTAAAACG 59.472 42.308 0.00 0.00 35.68 3.60
2852 3105 6.311690 GCACCAGTGAGTAGATTCTCTAAAAC 59.688 42.308 0.99 0.00 35.68 2.43
2853 3106 6.014584 TGCACCAGTGAGTAGATTCTCTAAAA 60.015 38.462 0.99 0.00 35.68 1.52
2854 3107 5.480422 TGCACCAGTGAGTAGATTCTCTAAA 59.520 40.000 0.99 0.00 35.68 1.85
2855 3108 5.016831 TGCACCAGTGAGTAGATTCTCTAA 58.983 41.667 0.99 0.00 35.68 2.10
2856 3109 4.600062 TGCACCAGTGAGTAGATTCTCTA 58.400 43.478 0.99 0.00 35.68 2.43
2857 3110 3.435275 TGCACCAGTGAGTAGATTCTCT 58.565 45.455 0.99 0.00 35.68 3.10
2858 3111 3.194542 ACTGCACCAGTGAGTAGATTCTC 59.805 47.826 0.99 0.00 43.63 2.87
2859 3112 3.169099 ACTGCACCAGTGAGTAGATTCT 58.831 45.455 0.99 0.00 43.63 2.40
2860 3113 3.601443 ACTGCACCAGTGAGTAGATTC 57.399 47.619 0.99 0.00 43.63 2.52
2870 3123 4.320456 CGGGCTCACTGCACCAGT 62.320 66.667 0.00 0.00 46.51 4.00
2871 3124 2.449031 TAACGGGCTCACTGCACCAG 62.449 60.000 0.00 0.00 43.53 4.00
2872 3125 2.449031 CTAACGGGCTCACTGCACCA 62.449 60.000 0.00 0.00 43.53 4.17
2873 3126 1.741770 CTAACGGGCTCACTGCACC 60.742 63.158 0.00 0.00 43.53 5.01
2874 3127 1.004918 ACTAACGGGCTCACTGCAC 60.005 57.895 0.00 0.00 45.15 4.57
2875 3128 1.005037 CACTAACGGGCTCACTGCA 60.005 57.895 0.00 0.00 45.15 4.41
2876 3129 0.602905 AACACTAACGGGCTCACTGC 60.603 55.000 0.00 0.00 41.94 4.40
2877 3130 1.148310 CAACACTAACGGGCTCACTG 58.852 55.000 0.00 0.00 0.00 3.66
2878 3131 0.602905 GCAACACTAACGGGCTCACT 60.603 55.000 0.00 0.00 0.00 3.41
2879 3132 0.882927 TGCAACACTAACGGGCTCAC 60.883 55.000 0.00 0.00 0.00 3.51
2880 3133 0.179043 TTGCAACACTAACGGGCTCA 60.179 50.000 0.00 0.00 0.00 4.26
2881 3134 1.165270 ATTGCAACACTAACGGGCTC 58.835 50.000 0.00 0.00 0.00 4.70
2882 3135 1.616159 AATTGCAACACTAACGGGCT 58.384 45.000 0.00 0.00 0.00 5.19
2883 3136 2.745281 TCTAATTGCAACACTAACGGGC 59.255 45.455 0.00 0.00 0.00 6.13
2884 3137 4.000988 ACTCTAATTGCAACACTAACGGG 58.999 43.478 0.00 0.00 0.00 5.28
2885 3138 4.201589 CGACTCTAATTGCAACACTAACGG 60.202 45.833 0.00 0.00 0.00 4.44
2886 3139 4.201589 CCGACTCTAATTGCAACACTAACG 60.202 45.833 0.00 3.07 0.00 3.18
2887 3140 4.092968 CCCGACTCTAATTGCAACACTAAC 59.907 45.833 0.00 0.00 0.00 2.34
2888 3141 4.020928 TCCCGACTCTAATTGCAACACTAA 60.021 41.667 0.00 0.00 0.00 2.24
2889 3142 3.512329 TCCCGACTCTAATTGCAACACTA 59.488 43.478 0.00 0.00 0.00 2.74
2890 3143 2.301870 TCCCGACTCTAATTGCAACACT 59.698 45.455 0.00 0.00 0.00 3.55
2891 3144 2.695359 TCCCGACTCTAATTGCAACAC 58.305 47.619 0.00 0.00 0.00 3.32
2892 3145 3.410631 TTCCCGACTCTAATTGCAACA 57.589 42.857 0.00 0.00 0.00 3.33
2893 3146 4.000988 TCTTTCCCGACTCTAATTGCAAC 58.999 43.478 0.00 0.00 0.00 4.17
2894 3147 4.280436 TCTTTCCCGACTCTAATTGCAA 57.720 40.909 0.00 0.00 0.00 4.08
2895 3148 3.973206 TCTTTCCCGACTCTAATTGCA 57.027 42.857 0.00 0.00 0.00 4.08
2896 3149 3.623510 CCTTCTTTCCCGACTCTAATTGC 59.376 47.826 0.00 0.00 0.00 3.56
2897 3150 5.086104 TCCTTCTTTCCCGACTCTAATTG 57.914 43.478 0.00 0.00 0.00 2.32
2898 3151 5.484290 TCTTCCTTCTTTCCCGACTCTAATT 59.516 40.000 0.00 0.00 0.00 1.40
2899 3152 5.024118 TCTTCCTTCTTTCCCGACTCTAAT 58.976 41.667 0.00 0.00 0.00 1.73
2900 3153 4.413760 TCTTCCTTCTTTCCCGACTCTAA 58.586 43.478 0.00 0.00 0.00 2.10
2901 3154 4.043608 TCTTCCTTCTTTCCCGACTCTA 57.956 45.455 0.00 0.00 0.00 2.43
2902 3155 2.890814 TCTTCCTTCTTTCCCGACTCT 58.109 47.619 0.00 0.00 0.00 3.24
2903 3156 3.431068 GGATCTTCCTTCTTTCCCGACTC 60.431 52.174 0.00 0.00 32.53 3.36
2904 3157 2.502130 GGATCTTCCTTCTTTCCCGACT 59.498 50.000 0.00 0.00 32.53 4.18
2905 3158 2.420269 GGGATCTTCCTTCTTTCCCGAC 60.420 54.545 0.00 0.00 36.92 4.79
2906 3159 1.838077 GGGATCTTCCTTCTTTCCCGA 59.162 52.381 0.00 0.00 36.92 5.14
2907 3160 1.134068 GGGGATCTTCCTTCTTTCCCG 60.134 57.143 0.00 0.00 45.89 5.14
2908 3161 1.923148 TGGGGATCTTCCTTCTTTCCC 59.077 52.381 0.00 0.00 44.49 3.97
2909 3162 3.625853 CTTGGGGATCTTCCTTCTTTCC 58.374 50.000 0.00 0.00 36.57 3.13
2910 3163 3.267031 TCCTTGGGGATCTTCCTTCTTTC 59.733 47.826 0.00 0.00 36.57 2.62
2911 3164 3.269034 TCCTTGGGGATCTTCCTTCTTT 58.731 45.455 0.00 0.00 36.57 2.52
2912 3165 2.934722 TCCTTGGGGATCTTCCTTCTT 58.065 47.619 0.00 0.00 36.57 2.52
2913 3166 2.668850 TCCTTGGGGATCTTCCTTCT 57.331 50.000 0.00 0.00 36.57 2.85
2914 3167 3.961484 ATTCCTTGGGGATCTTCCTTC 57.039 47.619 0.00 0.00 41.87 3.46
2915 3168 3.136626 CGTATTCCTTGGGGATCTTCCTT 59.863 47.826 0.00 0.00 41.87 3.36
2916 3169 2.706190 CGTATTCCTTGGGGATCTTCCT 59.294 50.000 0.00 0.00 41.87 3.36
2917 3170 2.438392 ACGTATTCCTTGGGGATCTTCC 59.562 50.000 0.00 0.00 41.87 3.46
2918 3171 3.134081 TGACGTATTCCTTGGGGATCTTC 59.866 47.826 0.00 0.00 41.87 2.87
2919 3172 3.112263 TGACGTATTCCTTGGGGATCTT 58.888 45.455 0.00 0.00 41.87 2.40
2920 3173 2.759355 TGACGTATTCCTTGGGGATCT 58.241 47.619 0.00 0.00 41.87 2.75
2921 3174 3.771577 ATGACGTATTCCTTGGGGATC 57.228 47.619 0.00 0.00 41.87 3.36
2922 3175 4.166144 AGAAATGACGTATTCCTTGGGGAT 59.834 41.667 0.00 0.00 41.87 3.85
2923 3176 3.521937 AGAAATGACGTATTCCTTGGGGA 59.478 43.478 0.00 0.00 40.36 4.81
2924 3177 3.627577 CAGAAATGACGTATTCCTTGGGG 59.372 47.826 0.00 0.00 0.00 4.96
2925 3178 3.065371 GCAGAAATGACGTATTCCTTGGG 59.935 47.826 0.00 0.00 0.00 4.12
2926 3179 3.065371 GGCAGAAATGACGTATTCCTTGG 59.935 47.826 0.00 0.00 0.00 3.61
2927 3180 3.689161 TGGCAGAAATGACGTATTCCTTG 59.311 43.478 0.00 0.00 0.00 3.61
2928 3181 3.689649 GTGGCAGAAATGACGTATTCCTT 59.310 43.478 0.00 0.00 0.00 3.36
2929 3182 3.270877 GTGGCAGAAATGACGTATTCCT 58.729 45.455 0.00 0.00 0.00 3.36
2930 3183 3.006940 TGTGGCAGAAATGACGTATTCC 58.993 45.455 0.00 0.00 0.00 3.01
2931 3184 4.083537 TGTTGTGGCAGAAATGACGTATTC 60.084 41.667 0.00 0.00 0.00 1.75
2932 3185 3.818210 TGTTGTGGCAGAAATGACGTATT 59.182 39.130 0.00 0.00 0.00 1.89
2933 3186 3.407698 TGTTGTGGCAGAAATGACGTAT 58.592 40.909 0.00 0.00 0.00 3.06
2934 3187 2.839975 TGTTGTGGCAGAAATGACGTA 58.160 42.857 0.00 0.00 0.00 3.57
2935 3188 1.674359 TGTTGTGGCAGAAATGACGT 58.326 45.000 0.00 0.00 0.00 4.34
2936 3189 2.981805 CAATGTTGTGGCAGAAATGACG 59.018 45.455 0.00 0.00 0.00 4.35
2937 3190 3.981211 ACAATGTTGTGGCAGAAATGAC 58.019 40.909 0.00 0.00 40.49 3.06
2944 3197 4.033129 CAGTTTTTGACAATGTTGTGGCAG 59.967 41.667 2.65 0.00 42.43 4.85
2954 3207 9.480053 CCAAGTGATTTATCAGTTTTTGACAAT 57.520 29.630 9.52 0.00 45.50 2.71
2959 3212 6.758254 ACCCCAAGTGATTTATCAGTTTTTG 58.242 36.000 9.52 1.66 45.50 2.44
2969 3222 1.075374 AGCAGCACCCCAAGTGATTTA 59.925 47.619 0.00 0.00 44.52 1.40
2971 3224 0.896940 CAGCAGCACCCCAAGTGATT 60.897 55.000 0.00 0.00 44.52 2.57
2975 3228 0.537371 GTAACAGCAGCACCCCAAGT 60.537 55.000 0.00 0.00 0.00 3.16
2976 3229 0.537143 TGTAACAGCAGCACCCCAAG 60.537 55.000 0.00 0.00 0.00 3.61
2977 3230 0.106469 TTGTAACAGCAGCACCCCAA 60.106 50.000 0.00 0.00 0.00 4.12
2978 3231 0.112218 ATTGTAACAGCAGCACCCCA 59.888 50.000 0.00 0.00 0.00 4.96
2979 3232 1.256812 AATTGTAACAGCAGCACCCC 58.743 50.000 0.00 0.00 0.00 4.95
2980 3233 3.081804 ACTAATTGTAACAGCAGCACCC 58.918 45.455 0.00 0.00 0.00 4.61
2981 3234 3.127030 GGACTAATTGTAACAGCAGCACC 59.873 47.826 0.00 0.00 0.00 5.01
2983 3236 4.002982 CTGGACTAATTGTAACAGCAGCA 58.997 43.478 0.00 0.00 30.61 4.41
2984 3237 4.003648 ACTGGACTAATTGTAACAGCAGC 58.996 43.478 0.00 0.00 37.30 5.25
2985 3238 5.482908 AGACTGGACTAATTGTAACAGCAG 58.517 41.667 0.00 0.00 37.30 4.24
2986 3239 5.483685 AGACTGGACTAATTGTAACAGCA 57.516 39.130 0.00 0.00 37.30 4.41
2987 3240 5.701290 ACAAGACTGGACTAATTGTAACAGC 59.299 40.000 0.00 0.00 37.30 4.40
2988 3241 6.929049 TGACAAGACTGGACTAATTGTAACAG 59.071 38.462 0.00 0.00 38.74 3.16
2989 3242 6.822442 TGACAAGACTGGACTAATTGTAACA 58.178 36.000 0.00 0.00 34.41 2.41
2990 3243 7.724305 TTGACAAGACTGGACTAATTGTAAC 57.276 36.000 0.00 0.00 34.41 2.50
2991 3244 8.740123 TTTTGACAAGACTGGACTAATTGTAA 57.260 30.769 0.00 0.00 34.41 2.41
2993 3246 7.339466 AGTTTTTGACAAGACTGGACTAATTGT 59.661 33.333 5.73 0.00 36.83 2.71
2994 3247 7.645340 CAGTTTTTGACAAGACTGGACTAATTG 59.355 37.037 18.77 0.00 40.11 2.32
2995 3248 7.556275 TCAGTTTTTGACAAGACTGGACTAATT 59.444 33.333 22.91 0.00 42.75 1.40
2996 3249 7.054124 TCAGTTTTTGACAAGACTGGACTAAT 58.946 34.615 22.91 0.00 42.75 1.73
2999 3252 4.843728 TCAGTTTTTGACAAGACTGGACT 58.156 39.130 22.91 5.00 42.75 3.85
3000 3253 5.296780 TCATCAGTTTTTGACAAGACTGGAC 59.703 40.000 22.91 3.15 42.75 4.02
3002 3255 5.756195 TCATCAGTTTTTGACAAGACTGG 57.244 39.130 22.91 13.91 42.75 4.00
3003 3256 9.903682 ATAAATCATCAGTTTTTGACAAGACTG 57.096 29.630 19.78 19.78 43.50 3.51
3031 3284 6.846505 TGGTAGGGTTAGAAGAATGATGATCT 59.153 38.462 0.00 0.00 0.00 2.75
3035 3288 5.059833 GCTGGTAGGGTTAGAAGAATGATG 58.940 45.833 0.00 0.00 0.00 3.07
3037 3290 3.454812 GGCTGGTAGGGTTAGAAGAATGA 59.545 47.826 0.00 0.00 0.00 2.57
3038 3291 3.456277 AGGCTGGTAGGGTTAGAAGAATG 59.544 47.826 0.00 0.00 0.00 2.67
3039 3292 3.737263 AGGCTGGTAGGGTTAGAAGAAT 58.263 45.455 0.00 0.00 0.00 2.40
3040 3293 3.200958 AGGCTGGTAGGGTTAGAAGAA 57.799 47.619 0.00 0.00 0.00 2.52
3041 3294 2.942604 AGGCTGGTAGGGTTAGAAGA 57.057 50.000 0.00 0.00 0.00 2.87
3043 3296 2.044769 TGGTAGGCTGGTAGGGTTAGAA 59.955 50.000 0.00 0.00 0.00 2.10
3047 3434 0.912968 GGTGGTAGGCTGGTAGGGTT 60.913 60.000 0.00 0.00 0.00 4.11
3048 3435 1.306739 GGTGGTAGGCTGGTAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
3053 3440 2.246588 TGACTATAGGTGGTAGGCTGGT 59.753 50.000 4.43 0.00 0.00 4.00
3057 3444 4.153411 AGATGTGACTATAGGTGGTAGGC 58.847 47.826 4.43 0.00 0.00 3.93
3061 3448 4.265856 TGGAGATGTGACTATAGGTGGT 57.734 45.455 4.43 0.00 0.00 4.16
3065 3452 6.820335 TGTTGAATGGAGATGTGACTATAGG 58.180 40.000 4.43 0.00 0.00 2.57
3066 3453 7.225538 GGTTGTTGAATGGAGATGTGACTATAG 59.774 40.741 0.00 0.00 0.00 1.31
3067 3454 7.047891 GGTTGTTGAATGGAGATGTGACTATA 58.952 38.462 0.00 0.00 0.00 1.31
3097 3484 2.684038 CGTGACTGGATGGAGAGGAGTA 60.684 54.545 0.00 0.00 0.00 2.59
3099 3486 0.743688 CGTGACTGGATGGAGAGGAG 59.256 60.000 0.00 0.00 0.00 3.69
3100 3487 0.331616 TCGTGACTGGATGGAGAGGA 59.668 55.000 0.00 0.00 0.00 3.71
3102 3489 0.457851 GGTCGTGACTGGATGGAGAG 59.542 60.000 0.00 0.00 0.00 3.20
3110 3497 1.948104 TTGAGTTTGGTCGTGACTGG 58.052 50.000 0.00 0.00 0.00 4.00
3118 3505 3.318275 GGTCCCTTCTTTTGAGTTTGGTC 59.682 47.826 0.00 0.00 0.00 4.02
3120 3507 2.628178 GGGTCCCTTCTTTTGAGTTTGG 59.372 50.000 0.00 0.00 0.00 3.28
3140 3527 1.308998 GTGAATATTGCGAGTGGGGG 58.691 55.000 0.00 0.00 0.00 5.40
3142 3529 3.470709 AGATGTGAATATTGCGAGTGGG 58.529 45.455 0.00 0.00 0.00 4.61
3144 3531 5.050499 GGAGAAGATGTGAATATTGCGAGTG 60.050 44.000 0.00 0.00 0.00 3.51
3145 3532 5.053145 GGAGAAGATGTGAATATTGCGAGT 58.947 41.667 0.00 0.00 0.00 4.18
3149 3536 5.619220 AGGAGGAGAAGATGTGAATATTGC 58.381 41.667 0.00 0.00 0.00 3.56
3150 3537 6.824553 TGAGGAGGAGAAGATGTGAATATTG 58.175 40.000 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.