Multiple sequence alignment - TraesCS6D01G003600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G003600 chr6D 100.000 3532 0 0 1 3532 1977159 1980690 0.000000e+00 6523.0
1 TraesCS6D01G003600 chr6D 84.082 534 73 8 329 858 1967759 1968284 4.070000e-139 505.0
2 TraesCS6D01G003600 chr6D 79.739 153 14 11 1056 1194 1969178 1969327 1.040000e-15 95.3
3 TraesCS6D01G003600 chr6B 87.097 1457 84 35 871 2272 4827073 4825666 0.000000e+00 1554.0
4 TraesCS6D01G003600 chr6B 90.517 464 35 4 3033 3492 4647958 4647500 3.900000e-169 604.0
5 TraesCS6D01G003600 chr6B 90.205 439 36 4 3058 3492 4723978 4723543 1.840000e-157 566.0
6 TraesCS6D01G003600 chr6B 87.342 474 37 12 2314 2778 4825656 4825197 4.040000e-144 521.0
7 TraesCS6D01G003600 chr6B 88.859 368 16 11 3033 3400 4662604 4662262 2.520000e-116 429.0
8 TraesCS6D01G003600 chr6B 84.949 392 31 8 3035 3398 4635766 4635375 4.310000e-99 372.0
9 TraesCS6D01G003600 chr6B 81.818 440 63 8 329 752 465103099 465102661 1.560000e-93 353.0
10 TraesCS6D01G003600 chr6B 89.333 150 14 2 2839 2987 4636638 4636490 1.670000e-43 187.0
11 TraesCS6D01G003600 chr6B 92.857 126 8 1 2684 2808 4636760 4636635 7.790000e-42 182.0
12 TraesCS6D01G003600 chr6B 92.135 89 7 0 3404 3492 4662229 4662141 3.700000e-25 126.0
13 TraesCS6D01G003600 chr6A 89.189 1295 73 31 1013 2265 916073 914804 0.000000e+00 1554.0
14 TraesCS6D01G003600 chr6A 90.595 723 49 10 2329 3042 914806 914094 0.000000e+00 941.0
15 TraesCS6D01G003600 chr6A 93.487 261 17 0 3035 3295 909331 909071 4.280000e-104 388.0
16 TraesCS6D01G003600 chr6A 80.892 157 20 8 2479 2629 909775 909623 8.010000e-22 115.0
17 TraesCS6D01G003600 chr2B 91.943 422 27 7 2626 3044 765359887 765359470 5.080000e-163 584.0
18 TraesCS6D01G003600 chr2B 85.910 511 43 14 2106 2602 773228243 773228738 5.230000e-143 518.0
19 TraesCS6D01G003600 chr2B 80.790 557 77 17 329 859 195372398 195372950 3.280000e-110 409.0
20 TraesCS6D01G003600 chr2B 83.947 380 40 11 2412 2778 773171408 773171779 9.390000e-91 344.0
21 TraesCS6D01G003600 chr2B 85.356 239 22 6 89 318 513700223 513700457 5.890000e-58 235.0
22 TraesCS6D01G003600 chr2B 84.677 124 8 6 2106 2227 773171241 773171355 2.880000e-21 113.0
23 TraesCS6D01G003600 chr3D 83.002 553 66 13 331 859 341717042 341717590 3.190000e-130 475.0
24 TraesCS6D01G003600 chr3D 94.872 39 2 0 5 43 590923123 590923161 1.060000e-05 62.1
25 TraesCS6D01G003600 chr1A 82.267 547 81 7 329 859 531363299 531362753 3.210000e-125 459.0
26 TraesCS6D01G003600 chr1A 100.000 41 0 0 1524 1564 137798660 137798700 3.780000e-10 76.8
27 TraesCS6D01G003600 chr3A 80.622 547 84 14 331 859 534386492 534387034 1.530000e-108 403.0
28 TraesCS6D01G003600 chr3A 81.061 396 59 5 329 708 335456068 335455673 5.730000e-78 302.0
29 TraesCS6D01G003600 chr4D 80.439 547 84 16 329 859 399191644 399192183 2.560000e-106 396.0
30 TraesCS6D01G003600 chr7D 80.146 549 81 16 329 859 556114906 556114368 5.530000e-103 385.0
31 TraesCS6D01G003600 chr7D 83.582 268 34 6 80 338 523543746 523543480 3.520000e-60 243.0
32 TraesCS6D01G003600 chr7D 81.509 265 39 8 80 338 8472557 8472297 3.570000e-50 209.0
33 TraesCS6D01G003600 chr7D 100.000 28 0 0 5 32 622413169 622413196 6.000000e-03 52.8
34 TraesCS6D01G003600 chr5B 79.336 542 87 18 329 856 388165677 388165147 1.210000e-94 357.0
35 TraesCS6D01G003600 chr5B 81.333 450 64 11 428 859 382087379 382086932 7.260000e-92 348.0
36 TraesCS6D01G003600 chr5B 80.137 438 69 6 329 750 58901397 58901832 9.520000e-81 311.0
37 TraesCS6D01G003600 chr5B 81.232 341 61 3 514 852 263612537 263612876 4.490000e-69 272.0
38 TraesCS6D01G003600 chr5B 75.920 299 53 14 52 338 621851634 621851343 6.150000e-28 135.0
39 TraesCS6D01G003600 chr4B 85.143 350 48 3 510 857 276976036 276975689 4.340000e-94 355.0
40 TraesCS6D01G003600 chr4A 78.237 556 89 17 330 859 16053863 16053314 9.450000e-86 327.0
41 TraesCS6D01G003600 chr4A 84.375 64 6 3 285 348 505827532 505827591 3.810000e-05 60.2
42 TraesCS6D01G003600 chr7B 89.272 261 23 5 72 329 456339625 456339883 4.400000e-84 322.0
43 TraesCS6D01G003600 chr7B 81.333 300 38 14 52 337 61122594 61122299 9.860000e-56 228.0
44 TraesCS6D01G003600 chr5D 86.111 288 36 4 52 339 489254783 489254500 1.230000e-79 307.0
45 TraesCS6D01G003600 chr5D 100.000 28 0 0 5 32 5011570 5011597 6.000000e-03 52.8
46 TraesCS6D01G003600 chr1D 80.285 421 57 11 331 735 445687288 445687698 9.590000e-76 294.0
47 TraesCS6D01G003600 chr1D 83.475 236 32 6 89 318 474238492 474238726 2.760000e-51 213.0
48 TraesCS6D01G003600 chr5A 82.059 340 60 1 514 852 313910921 313911260 4.460000e-74 289.0
49 TraesCS6D01G003600 chr5A 87.500 120 12 3 83 200 85122048 85121930 6.150000e-28 135.0
50 TraesCS6D01G003600 chr2D 84.281 299 36 6 48 338 346095978 346096273 7.460000e-72 281.0
51 TraesCS6D01G003600 chr1B 80.114 176 19 12 1962 2136 129182402 129182242 2.230000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G003600 chr6D 1977159 1980690 3531 False 6523.00 6523 100.000000 1 3532 1 chr6D.!!$F1 3531
1 TraesCS6D01G003600 chr6D 1967759 1969327 1568 False 300.15 505 81.910500 329 1194 2 chr6D.!!$F2 865
2 TraesCS6D01G003600 chr6B 4825197 4827073 1876 True 1037.50 1554 87.219500 871 2778 2 chr6B.!!$R6 1907
3 TraesCS6D01G003600 chr6B 4635375 4636760 1385 True 247.00 372 89.046333 2684 3398 3 chr6B.!!$R4 714
4 TraesCS6D01G003600 chr6A 914094 916073 1979 True 1247.50 1554 89.892000 1013 3042 2 chr6A.!!$R2 2029
5 TraesCS6D01G003600 chr6A 909071 909775 704 True 251.50 388 87.189500 2479 3295 2 chr6A.!!$R1 816
6 TraesCS6D01G003600 chr2B 195372398 195372950 552 False 409.00 409 80.790000 329 859 1 chr2B.!!$F1 530
7 TraesCS6D01G003600 chr2B 773171241 773171779 538 False 228.50 344 84.312000 2106 2778 2 chr2B.!!$F4 672
8 TraesCS6D01G003600 chr3D 341717042 341717590 548 False 475.00 475 83.002000 331 859 1 chr3D.!!$F1 528
9 TraesCS6D01G003600 chr1A 531362753 531363299 546 True 459.00 459 82.267000 329 859 1 chr1A.!!$R1 530
10 TraesCS6D01G003600 chr3A 534386492 534387034 542 False 403.00 403 80.622000 331 859 1 chr3A.!!$F1 528
11 TraesCS6D01G003600 chr4D 399191644 399192183 539 False 396.00 396 80.439000 329 859 1 chr4D.!!$F1 530
12 TraesCS6D01G003600 chr7D 556114368 556114906 538 True 385.00 385 80.146000 329 859 1 chr7D.!!$R3 530
13 TraesCS6D01G003600 chr5B 388165147 388165677 530 True 357.00 357 79.336000 329 856 1 chr5B.!!$R2 527
14 TraesCS6D01G003600 chr4A 16053314 16053863 549 True 327.00 327 78.237000 330 859 1 chr4A.!!$R1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 1646 0.174389 TGAGATGAGAGAGCCGTTGC 59.826 55.0 0.0 0.0 37.95 4.17 F
1001 1740 0.318441 CACAACGGCTCTCTCTCCAA 59.682 55.0 0.0 0.0 0.00 3.53 F
1770 2604 0.395862 GATCCCTCTCGTCCCACTCA 60.396 60.0 0.0 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 3180 0.033920 ACGCACTGTGATCTTGCTCA 59.966 50.000 12.86 0.0 33.9 4.26 R
2305 3188 0.249073 GGCTATCGACGCACTGTGAT 60.249 55.000 12.86 0.0 0.0 3.06 R
3065 4662 1.003116 GAGCATTGCACGCATAGAAGG 60.003 52.381 11.91 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.752879 GCGGCGCACAGGGTCTAA 62.753 66.667 29.21 0.00 0.00 2.10
48 49 2.186903 CGGCGCACAGGGTCTAAT 59.813 61.111 10.83 0.00 0.00 1.73
49 50 2.173669 CGGCGCACAGGGTCTAATG 61.174 63.158 10.83 0.00 0.00 1.90
50 51 1.078426 GGCGCACAGGGTCTAATGT 60.078 57.895 10.83 0.00 0.00 2.71
51 52 0.676782 GGCGCACAGGGTCTAATGTT 60.677 55.000 10.83 0.00 0.00 2.71
52 53 1.165270 GCGCACAGGGTCTAATGTTT 58.835 50.000 0.30 0.00 0.00 2.83
53 54 1.130561 GCGCACAGGGTCTAATGTTTC 59.869 52.381 0.30 0.00 0.00 2.78
54 55 2.422597 CGCACAGGGTCTAATGTTTCA 58.577 47.619 0.00 0.00 0.00 2.69
55 56 2.811431 CGCACAGGGTCTAATGTTTCAA 59.189 45.455 0.00 0.00 0.00 2.69
56 57 3.252215 CGCACAGGGTCTAATGTTTCAAA 59.748 43.478 0.00 0.00 0.00 2.69
57 58 4.613622 CGCACAGGGTCTAATGTTTCAAAG 60.614 45.833 0.00 0.00 0.00 2.77
58 59 4.518970 GCACAGGGTCTAATGTTTCAAAGA 59.481 41.667 0.00 0.00 0.00 2.52
59 60 5.009610 GCACAGGGTCTAATGTTTCAAAGAA 59.990 40.000 0.00 0.00 0.00 2.52
60 61 6.438763 CACAGGGTCTAATGTTTCAAAGAAC 58.561 40.000 0.00 0.00 0.00 3.01
61 62 6.263168 CACAGGGTCTAATGTTTCAAAGAACT 59.737 38.462 0.00 0.00 0.00 3.01
62 63 6.263168 ACAGGGTCTAATGTTTCAAAGAACTG 59.737 38.462 0.00 0.00 34.20 3.16
63 64 6.263168 CAGGGTCTAATGTTTCAAAGAACTGT 59.737 38.462 0.00 0.00 0.00 3.55
64 65 6.833933 AGGGTCTAATGTTTCAAAGAACTGTT 59.166 34.615 0.00 0.00 0.00 3.16
65 66 7.013369 AGGGTCTAATGTTTCAAAGAACTGTTC 59.987 37.037 12.54 12.54 0.00 3.18
66 67 6.851330 GGTCTAATGTTTCAAAGAACTGTTCG 59.149 38.462 14.35 1.61 34.02 3.95
67 68 6.357240 GTCTAATGTTTCAAAGAACTGTTCGC 59.643 38.462 14.35 0.00 34.02 4.70
68 69 4.900635 ATGTTTCAAAGAACTGTTCGCT 57.099 36.364 14.35 3.87 34.02 4.93
69 70 6.371809 AATGTTTCAAAGAACTGTTCGCTA 57.628 33.333 14.35 0.11 34.02 4.26
70 71 5.804692 TGTTTCAAAGAACTGTTCGCTAA 57.195 34.783 14.35 5.88 34.02 3.09
71 72 6.371809 TGTTTCAAAGAACTGTTCGCTAAT 57.628 33.333 14.35 0.00 34.02 1.73
72 73 6.791303 TGTTTCAAAGAACTGTTCGCTAATT 58.209 32.000 14.35 0.92 34.02 1.40
73 74 7.921787 TGTTTCAAAGAACTGTTCGCTAATTA 58.078 30.769 14.35 0.00 34.02 1.40
74 75 8.067784 TGTTTCAAAGAACTGTTCGCTAATTAG 58.932 33.333 14.35 8.20 34.02 1.73
75 76 7.956420 TTCAAAGAACTGTTCGCTAATTAGA 57.044 32.000 16.85 0.00 34.02 2.10
76 77 7.956420 TCAAAGAACTGTTCGCTAATTAGAA 57.044 32.000 16.85 0.00 34.02 2.10
77 78 8.373048 TCAAAGAACTGTTCGCTAATTAGAAA 57.627 30.769 16.85 6.65 34.02 2.52
78 79 8.280497 TCAAAGAACTGTTCGCTAATTAGAAAC 58.720 33.333 16.85 17.37 34.02 2.78
79 80 7.724305 AAGAACTGTTCGCTAATTAGAAACA 57.276 32.000 22.33 22.33 32.93 2.83
80 81 7.907214 AGAACTGTTCGCTAATTAGAAACAT 57.093 32.000 23.24 15.22 33.25 2.71
81 82 7.743104 AGAACTGTTCGCTAATTAGAAACATG 58.257 34.615 23.24 19.90 33.25 3.21
82 83 7.387948 AGAACTGTTCGCTAATTAGAAACATGT 59.612 33.333 23.24 20.29 33.25 3.21
83 84 7.435068 ACTGTTCGCTAATTAGAAACATGTT 57.565 32.000 23.24 4.92 33.25 2.71
84 85 7.519002 ACTGTTCGCTAATTAGAAACATGTTC 58.481 34.615 23.24 5.78 33.25 3.18
85 86 7.172532 ACTGTTCGCTAATTAGAAACATGTTCA 59.827 33.333 23.24 0.00 33.25 3.18
86 87 7.295201 TGTTCGCTAATTAGAAACATGTTCAC 58.705 34.615 20.97 9.39 30.61 3.18
87 88 6.089920 TCGCTAATTAGAAACATGTTCACG 57.910 37.500 16.85 5.65 0.00 4.35
88 89 5.865013 TCGCTAATTAGAAACATGTTCACGA 59.135 36.000 16.85 7.81 0.00 4.35
89 90 6.533723 TCGCTAATTAGAAACATGTTCACGAT 59.466 34.615 16.85 0.00 0.00 3.73
90 91 7.064134 TCGCTAATTAGAAACATGTTCACGATT 59.936 33.333 16.85 14.99 0.00 3.34
91 92 7.370836 CGCTAATTAGAAACATGTTCACGATTC 59.629 37.037 16.85 4.54 0.00 2.52
92 93 8.175069 GCTAATTAGAAACATGTTCACGATTCA 58.825 33.333 16.85 0.00 0.00 2.57
95 96 9.743057 AATTAGAAACATGTTCACGATTCAAAA 57.257 25.926 12.39 4.16 0.00 2.44
96 97 9.912634 ATTAGAAACATGTTCACGATTCAAAAT 57.087 25.926 12.39 6.12 0.00 1.82
99 100 9.912634 AGAAACATGTTCACGATTCAAAATAAT 57.087 25.926 12.39 0.00 0.00 1.28
100 101 9.941991 GAAACATGTTCACGATTCAAAATAATG 57.058 29.630 12.39 0.00 0.00 1.90
101 102 9.474920 AAACATGTTCACGATTCAAAATAATGT 57.525 25.926 12.39 0.00 0.00 2.71
102 103 9.474920 AACATGTTCACGATTCAAAATAATGTT 57.525 25.926 4.92 0.00 0.00 2.71
103 104 9.474920 ACATGTTCACGATTCAAAATAATGTTT 57.525 25.926 0.00 0.00 0.00 2.83
104 105 9.730146 CATGTTCACGATTCAAAATAATGTTTG 57.270 29.630 0.00 0.00 39.41 2.93
105 106 7.782242 TGTTCACGATTCAAAATAATGTTTGC 58.218 30.769 0.00 0.00 38.20 3.68
106 107 7.651304 TGTTCACGATTCAAAATAATGTTTGCT 59.349 29.630 0.00 0.00 38.20 3.91
107 108 9.123709 GTTCACGATTCAAAATAATGTTTGCTA 57.876 29.630 0.00 0.00 38.20 3.49
108 109 9.684448 TTCACGATTCAAAATAATGTTTGCTAA 57.316 25.926 0.00 0.00 38.20 3.09
109 110 9.853555 TCACGATTCAAAATAATGTTTGCTAAT 57.146 25.926 0.00 0.00 38.20 1.73
140 141 9.488124 AAAATGTTCACGAATTTGAAAACAATG 57.512 25.926 16.26 0.00 37.24 2.82
141 142 7.769272 ATGTTCACGAATTTGAAAACAATGT 57.231 28.000 16.26 0.00 37.24 2.71
142 143 7.588143 TGTTCACGAATTTGAAAACAATGTT 57.412 28.000 12.31 0.00 37.24 2.71
143 144 7.670916 TGTTCACGAATTTGAAAACAATGTTC 58.329 30.769 0.00 0.00 37.24 3.18
144 145 7.329471 TGTTCACGAATTTGAAAACAATGTTCA 59.671 29.630 0.00 0.00 37.24 3.18
145 146 7.215696 TCACGAATTTGAAAACAATGTTCAC 57.784 32.000 0.00 0.00 34.78 3.18
146 147 6.808704 TCACGAATTTGAAAACAATGTTCACA 59.191 30.769 0.00 0.09 34.78 3.58
147 148 7.490725 TCACGAATTTGAAAACAATGTTCACAT 59.509 29.630 0.00 0.00 34.78 3.21
148 149 8.115520 CACGAATTTGAAAACAATGTTCACATT 58.884 29.630 0.00 0.00 46.62 2.71
149 150 8.663911 ACGAATTTGAAAACAATGTTCACATTT 58.336 25.926 0.00 1.14 43.48 2.32
150 151 9.146270 CGAATTTGAAAACAATGTTCACATTTC 57.854 29.630 0.00 0.00 43.48 2.17
151 152 9.985318 GAATTTGAAAACAATGTTCACATTTCA 57.015 25.926 0.00 2.61 43.48 2.69
152 153 9.991388 AATTTGAAAACAATGTTCACATTTCAG 57.009 25.926 0.00 0.00 43.48 3.02
153 154 8.768957 TTTGAAAACAATGTTCACATTTCAGA 57.231 26.923 0.00 0.00 43.48 3.27
154 155 8.768957 TTGAAAACAATGTTCACATTTCAGAA 57.231 26.923 0.00 0.00 43.48 3.02
155 156 8.768957 TGAAAACAATGTTCACATTTCAGAAA 57.231 26.923 0.00 0.00 43.48 2.52
156 157 9.212641 TGAAAACAATGTTCACATTTCAGAAAA 57.787 25.926 0.00 0.00 43.48 2.29
159 160 9.991388 AAACAATGTTCACATTTCAGAAAAATG 57.009 25.926 0.00 8.54 43.48 2.32
161 162 9.165035 ACAATGTTCACATTTCAGAAAAATGTT 57.835 25.926 12.19 0.00 45.52 2.71
162 163 9.640974 CAATGTTCACATTTCAGAAAAATGTTC 57.359 29.630 12.19 7.80 45.52 3.18
163 164 7.448588 TGTTCACATTTCAGAAAAATGTTCG 57.551 32.000 12.19 4.62 45.52 3.95
164 165 6.019961 TGTTCACATTTCAGAAAAATGTTCGC 60.020 34.615 12.19 7.07 45.52 4.70
165 166 5.830912 TCACATTTCAGAAAAATGTTCGCT 58.169 33.333 12.19 0.00 45.52 4.93
166 167 6.964908 TCACATTTCAGAAAAATGTTCGCTA 58.035 32.000 12.19 0.00 45.52 4.26
167 168 7.421599 TCACATTTCAGAAAAATGTTCGCTAA 58.578 30.769 12.19 0.00 45.52 3.09
168 169 8.081633 TCACATTTCAGAAAAATGTTCGCTAAT 58.918 29.630 12.19 0.00 45.52 1.73
169 170 8.702438 CACATTTCAGAAAAATGTTCGCTAATT 58.298 29.630 12.19 0.00 45.52 1.40
170 171 8.915654 ACATTTCAGAAAAATGTTCGCTAATTC 58.084 29.630 9.68 0.00 45.52 2.17
171 172 9.132521 CATTTCAGAAAAATGTTCGCTAATTCT 57.867 29.630 0.00 0.00 34.01 2.40
173 174 9.607285 TTTCAGAAAAATGTTCGCTAATTCTAC 57.393 29.630 0.00 0.00 0.00 2.59
174 175 8.317891 TCAGAAAAATGTTCGCTAATTCTACA 57.682 30.769 0.00 0.00 0.00 2.74
175 176 8.779303 TCAGAAAAATGTTCGCTAATTCTACAA 58.221 29.630 0.00 0.00 0.00 2.41
176 177 9.393249 CAGAAAAATGTTCGCTAATTCTACAAA 57.607 29.630 0.00 0.00 0.00 2.83
177 178 9.959749 AGAAAAATGTTCGCTAATTCTACAAAA 57.040 25.926 0.00 0.00 0.00 2.44
180 181 9.691362 AAAATGTTCGCTAATTCTACAAAATGT 57.309 25.926 0.00 0.00 0.00 2.71
181 182 8.895932 AATGTTCGCTAATTCTACAAAATGTC 57.104 30.769 0.00 0.00 0.00 3.06
182 183 6.837992 TGTTCGCTAATTCTACAAAATGTCC 58.162 36.000 0.00 0.00 0.00 4.02
183 184 6.428465 TGTTCGCTAATTCTACAAAATGTCCA 59.572 34.615 0.00 0.00 0.00 4.02
184 185 6.417191 TCGCTAATTCTACAAAATGTCCAC 57.583 37.500 0.00 0.00 0.00 4.02
185 186 5.062934 TCGCTAATTCTACAAAATGTCCACG 59.937 40.000 0.00 0.00 0.00 4.94
186 187 5.062934 CGCTAATTCTACAAAATGTCCACGA 59.937 40.000 0.00 0.00 0.00 4.35
187 188 6.401688 CGCTAATTCTACAAAATGTCCACGAA 60.402 38.462 0.00 0.00 0.00 3.85
188 189 7.472543 GCTAATTCTACAAAATGTCCACGAAT 58.527 34.615 0.00 0.00 0.00 3.34
189 190 7.968405 GCTAATTCTACAAAATGTCCACGAATT 59.032 33.333 0.00 0.00 32.86 2.17
190 191 9.840427 CTAATTCTACAAAATGTCCACGAATTT 57.160 29.630 0.00 0.00 31.77 1.82
191 192 8.519492 AATTCTACAAAATGTCCACGAATTTG 57.481 30.769 0.00 0.00 37.10 2.32
192 193 6.869315 TCTACAAAATGTCCACGAATTTGA 57.131 33.333 0.00 0.00 35.52 2.69
193 194 7.265647 TCTACAAAATGTCCACGAATTTGAA 57.734 32.000 0.00 0.00 35.52 2.69
194 195 7.708051 TCTACAAAATGTCCACGAATTTGAAA 58.292 30.769 0.00 0.00 35.52 2.69
195 196 8.191446 TCTACAAAATGTCCACGAATTTGAAAA 58.809 29.630 0.00 0.00 35.52 2.29
196 197 7.602517 ACAAAATGTCCACGAATTTGAAAAA 57.397 28.000 0.00 0.00 35.52 1.94
274 275 9.985730 AATATGTTCATGAGTTGAAAAACATGT 57.014 25.926 13.22 0.00 45.71 3.21
275 276 9.985730 ATATGTTCATGAGTTGAAAAACATGTT 57.014 25.926 4.92 4.92 45.71 2.71
276 277 7.754069 TGTTCATGAGTTGAAAAACATGTTC 57.246 32.000 12.39 0.00 45.71 3.18
277 278 7.318893 TGTTCATGAGTTGAAAAACATGTTCA 58.681 30.769 12.39 2.74 45.71 3.18
278 279 7.980662 TGTTCATGAGTTGAAAAACATGTTCAT 59.019 29.630 12.39 5.57 45.71 2.57
279 280 7.933728 TCATGAGTTGAAAAACATGTTCATG 57.066 32.000 19.76 19.76 40.87 3.07
280 281 7.714703 TCATGAGTTGAAAAACATGTTCATGA 58.285 30.769 22.57 22.57 41.64 3.07
281 282 8.196103 TCATGAGTTGAAAAACATGTTCATGAA 58.804 29.630 23.51 3.38 41.35 2.57
282 283 8.984764 CATGAGTTGAAAAACATGTTCATGAAT 58.015 29.630 20.64 0.44 39.92 2.57
283 284 8.945481 TGAGTTGAAAAACATGTTCATGAATT 57.055 26.923 12.39 0.00 35.03 2.17
296 297 9.218359 CATGTTCATGAATTAAGAGAATGTTCG 57.782 33.333 12.12 0.00 0.00 3.95
297 298 7.243487 TGTTCATGAATTAAGAGAATGTTCGC 58.757 34.615 12.12 0.00 0.00 4.70
298 299 6.983474 TCATGAATTAAGAGAATGTTCGCA 57.017 33.333 0.00 0.00 0.00 5.10
299 300 7.376435 TCATGAATTAAGAGAATGTTCGCAA 57.624 32.000 0.00 0.00 0.00 4.85
300 301 7.815641 TCATGAATTAAGAGAATGTTCGCAAA 58.184 30.769 0.00 0.00 0.00 3.68
301 302 8.461222 TCATGAATTAAGAGAATGTTCGCAAAT 58.539 29.630 0.00 0.00 0.00 2.32
302 303 9.079833 CATGAATTAAGAGAATGTTCGCAAATT 57.920 29.630 8.45 8.45 32.20 1.82
303 304 9.643693 ATGAATTAAGAGAATGTTCGCAAATTT 57.356 25.926 9.42 0.00 30.87 1.82
304 305 9.128107 TGAATTAAGAGAATGTTCGCAAATTTC 57.872 29.630 9.42 5.68 30.87 2.17
305 306 9.346725 GAATTAAGAGAATGTTCGCAAATTTCT 57.653 29.630 9.42 0.00 30.87 2.52
310 311 9.528018 AAGAGAATGTTCGCAAATTTCTAAAAA 57.472 25.926 0.00 0.00 0.00 1.94
465 471 0.396811 GGAGTGGTGCCTTGTAGTGT 59.603 55.000 0.00 0.00 0.00 3.55
477 483 4.515191 GCCTTGTAGTGTGTTCAATCTTGA 59.485 41.667 0.00 0.00 34.92 3.02
488 494 7.173218 GTGTGTTCAATCTTGAGGTGATCTAAA 59.827 37.037 0.00 0.00 38.61 1.85
490 496 6.368791 TGTTCAATCTTGAGGTGATCTAAACG 59.631 38.462 0.00 0.00 38.61 3.60
505 511 5.026038 TCTAAACGAGTGACAAAAAGGGA 57.974 39.130 0.00 0.00 0.00 4.20
585 605 9.538508 CTTCATGTCTACATTATGTCATCTTGA 57.461 33.333 0.00 4.95 33.61 3.02
610 630 9.726034 GATTATTGTAATGTTTTGTTTCTTGCG 57.274 29.630 0.00 0.00 0.00 4.85
613 633 6.804534 TGTAATGTTTTGTTTCTTGCGAAG 57.195 33.333 0.00 0.00 0.00 3.79
618 638 6.862944 TGTTTTGTTTCTTGCGAAGTTAAG 57.137 33.333 0.00 0.00 0.00 1.85
633 653 5.915196 CGAAGTTAAGACATCGAGATGCATA 59.085 40.000 12.54 1.89 46.64 3.14
668 688 5.687166 TTTGGGGTGGAGTATTAGTAGTG 57.313 43.478 0.00 0.00 0.00 2.74
775 805 5.558818 TGCAATTTAATCACTGCCCAATTT 58.441 33.333 0.00 0.00 33.78 1.82
790 820 7.227711 ACTGCCCAATTTTAATTTGTTTACCAC 59.772 33.333 0.00 0.00 0.00 4.16
792 822 6.203145 GCCCAATTTTAATTTGTTTACCACGT 59.797 34.615 0.00 0.00 0.00 4.49
803 834 2.550606 GTTTACCACGTCATTTGCCTGA 59.449 45.455 0.00 0.00 0.00 3.86
809 844 2.095768 CACGTCATTTGCCTGATTTCGT 60.096 45.455 0.00 0.00 0.00 3.85
819 854 3.701542 TGCCTGATTTCGTGAGAGATACT 59.298 43.478 0.00 0.00 43.69 2.12
821 856 5.009110 TGCCTGATTTCGTGAGAGATACTAG 59.991 44.000 0.00 0.00 43.69 2.57
826 861 9.478768 CTGATTTCGTGAGAGATACTAGTAGTA 57.521 37.037 12.38 12.38 43.69 1.82
830 865 9.664332 TTTCGTGAGAGATACTAGTAGTAAACT 57.336 33.333 13.92 14.89 43.69 2.66
859 895 4.901849 CCTCTGGGTCTATTCTCCATTACA 59.098 45.833 0.00 0.00 0.00 2.41
861 897 6.235231 TCTGGGTCTATTCTCCATTACAAC 57.765 41.667 0.00 0.00 0.00 3.32
862 898 5.018539 TGGGTCTATTCTCCATTACAACG 57.981 43.478 0.00 0.00 0.00 4.10
863 899 4.712829 TGGGTCTATTCTCCATTACAACGA 59.287 41.667 0.00 0.00 0.00 3.85
864 900 5.163447 TGGGTCTATTCTCCATTACAACGAG 60.163 44.000 0.00 0.00 0.00 4.18
865 901 5.290386 GGTCTATTCTCCATTACAACGAGG 58.710 45.833 0.00 0.00 0.00 4.63
866 902 4.745620 GTCTATTCTCCATTACAACGAGGC 59.254 45.833 0.00 0.00 0.00 4.70
867 903 3.627395 ATTCTCCATTACAACGAGGCA 57.373 42.857 0.00 0.00 0.00 4.75
868 904 2.672961 TCTCCATTACAACGAGGCAG 57.327 50.000 0.00 0.00 0.00 4.85
930 1646 0.174389 TGAGATGAGAGAGCCGTTGC 59.826 55.000 0.00 0.00 37.95 4.17
971 1710 1.131420 GCAGCGAGCGAGACAAAAG 59.869 57.895 0.00 0.00 0.00 2.27
972 1711 1.784062 CAGCGAGCGAGACAAAAGG 59.216 57.895 0.00 0.00 0.00 3.11
975 1714 1.960994 GCGAGCGAGACAAAAGGAGC 61.961 60.000 0.00 0.00 0.00 4.70
999 1738 0.389166 CACACAACGGCTCTCTCTCC 60.389 60.000 0.00 0.00 0.00 3.71
1000 1739 0.827925 ACACAACGGCTCTCTCTCCA 60.828 55.000 0.00 0.00 0.00 3.86
1001 1740 0.318441 CACAACGGCTCTCTCTCCAA 59.682 55.000 0.00 0.00 0.00 3.53
1003 1742 1.625818 ACAACGGCTCTCTCTCCAATT 59.374 47.619 0.00 0.00 0.00 2.32
1004 1743 2.005451 CAACGGCTCTCTCTCCAATTG 58.995 52.381 0.00 0.00 0.00 2.32
1005 1744 0.539051 ACGGCTCTCTCTCCAATTGG 59.461 55.000 19.08 19.08 0.00 3.16
1006 1745 0.826715 CGGCTCTCTCTCCAATTGGA 59.173 55.000 25.53 25.53 43.08 3.53
1017 1770 1.650700 TCCAATTGGATTCCCCACCAT 59.349 47.619 23.63 0.00 46.62 3.55
1042 1803 3.788227 ACTGAGAGTGAGAGTGAGAGT 57.212 47.619 0.00 0.00 0.00 3.24
1043 1804 3.411446 ACTGAGAGTGAGAGTGAGAGTG 58.589 50.000 0.00 0.00 0.00 3.51
1044 1805 3.072330 ACTGAGAGTGAGAGTGAGAGTGA 59.928 47.826 0.00 0.00 0.00 3.41
1045 1806 3.673902 TGAGAGTGAGAGTGAGAGTGAG 58.326 50.000 0.00 0.00 0.00 3.51
1046 1807 2.420022 GAGAGTGAGAGTGAGAGTGAGC 59.580 54.545 0.00 0.00 0.00 4.26
1047 1808 2.040278 AGAGTGAGAGTGAGAGTGAGCT 59.960 50.000 0.00 0.00 0.00 4.09
1048 1809 2.819608 GAGTGAGAGTGAGAGTGAGCTT 59.180 50.000 0.00 0.00 0.00 3.74
1049 1810 4.006989 GAGTGAGAGTGAGAGTGAGCTTA 58.993 47.826 0.00 0.00 0.00 3.09
1093 1854 2.248248 GGTCAAAGCCCTAGCCTTTTT 58.752 47.619 4.44 0.00 41.25 1.94
1124 1888 1.215423 CCAAATCGATCCCCTTTCCCT 59.785 52.381 0.00 0.00 0.00 4.20
1129 1893 2.614013 ATCCCCTTTCCCTGCCGT 60.614 61.111 0.00 0.00 0.00 5.68
1335 2124 2.387772 CCCTCCTCCTCCTCCTCGA 61.388 68.421 0.00 0.00 0.00 4.04
1340 2129 3.336568 TCCTCCTCCTCGACCGGT 61.337 66.667 6.92 6.92 0.00 5.28
1341 2130 3.141488 CCTCCTCCTCGACCGGTG 61.141 72.222 14.63 4.45 0.00 4.94
1343 2132 3.640257 CTCCTCCTCGACCGGTGGA 62.640 68.421 14.63 17.26 42.73 4.02
1356 2148 3.319198 GTGGAGGTGGCGGAGGAA 61.319 66.667 0.00 0.00 0.00 3.36
1359 2151 4.475135 GAGGTGGCGGAGGAAGGC 62.475 72.222 0.00 0.00 0.00 4.35
1674 2508 4.459089 GTGCTCCACTCCGGCTCC 62.459 72.222 0.00 0.00 33.14 4.70
1676 2510 4.459089 GCTCCACTCCGGCTCCAC 62.459 72.222 0.00 0.00 33.14 4.02
1677 2511 3.775654 CTCCACTCCGGCTCCACC 61.776 72.222 0.00 0.00 33.14 4.61
1678 2512 4.316823 TCCACTCCGGCTCCACCT 62.317 66.667 0.00 0.00 35.61 4.00
1679 2513 3.775654 CCACTCCGGCTCCACCTC 61.776 72.222 0.00 0.00 35.61 3.85
1761 2595 0.467106 TCCTCAGCAGATCCCTCTCG 60.467 60.000 0.00 0.00 0.00 4.04
1767 2601 2.022240 GCAGATCCCTCTCGTCCCAC 62.022 65.000 0.00 0.00 0.00 4.61
1770 2604 0.395862 GATCCCTCTCGTCCCACTCA 60.396 60.000 0.00 0.00 0.00 3.41
1781 2615 2.187946 CCACTCATGGCGGGAGAC 59.812 66.667 11.58 0.00 39.82 3.36
1782 2616 2.202797 CACTCATGGCGGGAGACG 60.203 66.667 11.58 0.00 45.14 4.18
1783 2617 3.461773 ACTCATGGCGGGAGACGG 61.462 66.667 11.58 0.00 45.14 4.79
1784 2618 3.147595 CTCATGGCGGGAGACGGA 61.148 66.667 0.00 0.00 45.14 4.69
1785 2619 3.432051 CTCATGGCGGGAGACGGAC 62.432 68.421 0.00 0.00 45.14 4.79
1786 2620 4.873129 CATGGCGGGAGACGGACG 62.873 72.222 0.00 0.00 45.14 4.79
2135 2981 2.507484 TCAGCAGCAACAACATTAGCT 58.493 42.857 0.00 0.00 37.95 3.32
2141 2987 4.609947 CAGCAACAACATTAGCTGTTTCA 58.390 39.130 0.00 0.00 45.98 2.69
2142 2988 5.224888 CAGCAACAACATTAGCTGTTTCAT 58.775 37.500 0.00 0.00 45.98 2.57
2183 3029 1.493772 CTGCAAGCACAACCACAATG 58.506 50.000 0.00 0.00 0.00 2.82
2184 3030 0.822811 TGCAAGCACAACCACAATGT 59.177 45.000 0.00 0.00 0.00 2.71
2246 3129 1.291184 TGCTCTTCCATGTTGTCGCG 61.291 55.000 0.00 0.00 0.00 5.87
2273 3156 4.625800 CAGGTTCACTAGCCTGCC 57.374 61.111 1.70 0.00 44.65 4.85
2275 3158 1.195115 CAGGTTCACTAGCCTGCCTA 58.805 55.000 1.70 0.00 44.65 3.93
2278 3161 1.196012 GTTCACTAGCCTGCCTAGGT 58.804 55.000 11.31 0.00 46.44 3.08
2280 3163 2.764572 GTTCACTAGCCTGCCTAGGTAA 59.235 50.000 11.31 0.00 46.44 2.85
2281 3164 3.330126 TCACTAGCCTGCCTAGGTAAT 57.670 47.619 11.31 0.00 46.44 1.89
2282 3165 3.654273 TCACTAGCCTGCCTAGGTAATT 58.346 45.455 11.31 0.00 46.44 1.40
2283 3166 3.388024 TCACTAGCCTGCCTAGGTAATTG 59.612 47.826 11.31 0.00 46.44 2.32
2284 3167 2.706190 ACTAGCCTGCCTAGGTAATTGG 59.294 50.000 11.31 4.90 46.44 3.16
2285 3168 1.596496 AGCCTGCCTAGGTAATTGGT 58.404 50.000 11.31 0.09 46.41 3.67
2286 3169 1.923148 AGCCTGCCTAGGTAATTGGTT 59.077 47.619 11.31 0.00 46.41 3.67
2287 3170 2.024414 GCCTGCCTAGGTAATTGGTTG 58.976 52.381 11.31 0.00 46.41 3.77
2288 3171 2.024414 CCTGCCTAGGTAATTGGTTGC 58.976 52.381 11.31 0.00 39.39 4.17
2289 3172 2.620367 CCTGCCTAGGTAATTGGTTGCA 60.620 50.000 11.31 0.00 39.39 4.08
2290 3173 2.684881 CTGCCTAGGTAATTGGTTGCAG 59.315 50.000 11.31 3.32 38.98 4.41
2291 3174 2.041081 TGCCTAGGTAATTGGTTGCAGT 59.959 45.455 11.31 0.00 0.00 4.40
2292 3175 2.423538 GCCTAGGTAATTGGTTGCAGTG 59.576 50.000 11.31 0.00 0.00 3.66
2293 3176 2.423538 CCTAGGTAATTGGTTGCAGTGC 59.576 50.000 8.58 8.58 0.00 4.40
2294 3177 1.993956 AGGTAATTGGTTGCAGTGCA 58.006 45.000 15.37 15.37 36.47 4.57
2295 3178 2.528564 AGGTAATTGGTTGCAGTGCAT 58.471 42.857 20.50 5.13 38.76 3.96
2296 3179 3.696045 AGGTAATTGGTTGCAGTGCATA 58.304 40.909 20.50 7.27 38.76 3.14
2297 3180 4.280819 AGGTAATTGGTTGCAGTGCATAT 58.719 39.130 20.50 7.61 38.76 1.78
2298 3181 4.098349 AGGTAATTGGTTGCAGTGCATATG 59.902 41.667 20.50 0.00 38.76 1.78
2299 3182 4.097741 GGTAATTGGTTGCAGTGCATATGA 59.902 41.667 20.50 6.43 38.76 2.15
2300 3183 4.380841 AATTGGTTGCAGTGCATATGAG 57.619 40.909 20.50 0.00 38.76 2.90
2301 3184 1.097232 TGGTTGCAGTGCATATGAGC 58.903 50.000 20.50 14.03 38.76 4.26
2302 3185 1.097232 GGTTGCAGTGCATATGAGCA 58.903 50.000 20.50 7.62 43.35 4.26
2312 3195 4.146745 TGCATATGAGCAAGATCACAGT 57.853 40.909 6.97 0.00 42.46 3.55
2331 3214 2.782222 GCGTCGATAGCCCTCCACA 61.782 63.158 0.00 0.00 0.00 4.17
2358 3241 7.479980 TCAATTCAGAATTTGTTGTCTTCGTT 58.520 30.769 5.58 0.00 0.00 3.85
2401 3284 1.480789 TGGCGACAGTAATGAGGCTA 58.519 50.000 14.81 5.63 35.01 3.93
2407 3290 4.500887 GCGACAGTAATGAGGCTACCATAA 60.501 45.833 0.00 0.00 0.00 1.90
2421 3304 2.997980 ACCATAATGGACAACATCGCA 58.002 42.857 0.00 0.00 40.96 5.10
2424 3307 3.353524 CATAATGGACAACATCGCAACG 58.646 45.455 0.00 0.00 39.40 4.10
2466 3349 2.686816 GCACACCGAAATGTCCCCG 61.687 63.158 0.00 0.00 0.00 5.73
2603 3496 5.526115 TCGTTCGTTCATTCTTAAGAGTGT 58.474 37.500 22.83 4.89 34.01 3.55
2605 3498 6.143438 TCGTTCGTTCATTCTTAAGAGTGTTC 59.857 38.462 22.83 16.58 34.01 3.18
2615 3508 5.784177 TCTTAAGAGTGTTCACTGATGGAC 58.216 41.667 10.29 0.00 34.49 4.02
2616 3509 5.304357 TCTTAAGAGTGTTCACTGATGGACA 59.696 40.000 10.29 0.00 42.45 4.02
2621 3514 2.837498 TGTTCACTGATGGACACACTG 58.163 47.619 0.00 0.00 39.59 3.66
2622 3515 1.532868 GTTCACTGATGGACACACTGC 59.467 52.381 0.00 0.00 34.01 4.40
2623 3516 1.051008 TCACTGATGGACACACTGCT 58.949 50.000 0.00 0.00 0.00 4.24
2670 3571 4.898320 TCTTTCTCTGCTTGCAGTTCATA 58.102 39.130 20.20 2.14 0.00 2.15
2693 3594 5.198965 ACTGATTCCTGAATGAATTCCCTG 58.801 41.667 2.27 0.00 35.15 4.45
2696 3597 6.018469 TGATTCCTGAATGAATTCCCTGTTT 58.982 36.000 2.27 0.00 35.15 2.83
2698 3599 5.726980 TCCTGAATGAATTCCCTGTTTTG 57.273 39.130 2.27 0.00 35.97 2.44
2699 3600 5.392995 TCCTGAATGAATTCCCTGTTTTGA 58.607 37.500 2.27 0.00 35.97 2.69
2820 3721 3.008923 TGGTAGTGATGGCAGAATCAACA 59.991 43.478 0.00 0.00 38.28 3.33
2832 3733 5.915196 GGCAGAATCAACAGTCAACTTAAAC 59.085 40.000 0.00 0.00 0.00 2.01
2836 3737 8.184192 CAGAATCAACAGTCAACTTAAACAAGT 58.816 33.333 0.00 0.00 33.76 3.16
2959 3861 4.767928 ACTATTCTTCTTCTCTGACACGGT 59.232 41.667 0.00 0.00 0.00 4.83
2962 3864 2.031069 TCTTCTTCTCTGACACGGTTCG 60.031 50.000 0.00 0.00 0.00 3.95
2972 3874 0.391395 ACACGGTTCGTTTGTGTGGA 60.391 50.000 0.00 0.00 44.59 4.02
2987 3889 8.687301 CGTTTGTGTGGAATGAATTTTAGTTAC 58.313 33.333 0.00 0.00 0.00 2.50
3043 4640 0.809385 ATTGCATGACACTCTGCTGC 59.191 50.000 0.00 0.00 39.16 5.25
3047 4644 2.079158 GCATGACACTCTGCTGCTTTA 58.921 47.619 0.00 0.00 35.49 1.85
3056 4653 2.221169 TCTGCTGCTTTACTGTGGTTG 58.779 47.619 0.00 0.00 0.00 3.77
3065 4662 6.503524 TGCTTTACTGTGGTTGAAAATTCTC 58.496 36.000 0.00 0.00 0.00 2.87
3103 4700 3.055530 TGCTCCTGAATGAGTTCCTTCTC 60.056 47.826 0.00 0.00 34.74 2.87
3105 4702 4.323409 GCTCCTGAATGAGTTCCTTCTCTT 60.323 45.833 0.00 0.00 35.68 2.85
3119 4716 4.655649 TCCTTCTCTTCAGCCATGCTATAA 59.344 41.667 0.00 0.00 36.40 0.98
3128 4725 9.273016 TCTTCAGCCATGCTATAACTTATAAAC 57.727 33.333 0.00 0.00 36.40 2.01
3130 4727 8.607441 TCAGCCATGCTATAACTTATAAACAG 57.393 34.615 0.00 0.00 36.40 3.16
3209 4806 9.107367 GATTGTCAACTTAAAAACTCTGATTCG 57.893 33.333 0.00 0.00 0.00 3.34
3264 4875 8.230472 AGGCTATTTTCCAATTTAGTCATCTG 57.770 34.615 0.00 0.00 0.00 2.90
3279 4890 3.501828 GTCATCTGTGTTGTATTGGCACA 59.498 43.478 0.00 0.00 40.32 4.57
3298 4909 5.822519 GGCACATCCAGTCAATACTTATGAA 59.177 40.000 0.00 0.00 33.54 2.57
3339 4950 4.700213 ACACAAGTCACAACTTTAGCACTT 59.300 37.500 0.00 0.00 43.28 3.16
3348 4959 5.050499 CACAACTTTAGCACTTCTGTCTCAG 60.050 44.000 0.00 0.00 0.00 3.35
3353 4964 3.550437 AGCACTTCTGTCTCAGTTGTT 57.450 42.857 0.00 0.00 32.61 2.83
3355 4966 5.220710 AGCACTTCTGTCTCAGTTGTTAT 57.779 39.130 0.00 0.00 32.61 1.89
3356 4967 4.993584 AGCACTTCTGTCTCAGTTGTTATG 59.006 41.667 0.00 0.00 32.61 1.90
3403 5028 9.730420 TGAATTTTCAGTTTTGAACTTACTAGC 57.270 29.630 0.00 0.00 42.79 3.42
3404 5029 9.181805 GAATTTTCAGTTTTGAACTTACTAGCC 57.818 33.333 0.00 0.00 42.79 3.93
3405 5030 7.633193 TTTTCAGTTTTGAACTTACTAGCCA 57.367 32.000 0.00 0.00 42.79 4.75
3406 5031 6.861065 TTCAGTTTTGAACTTACTAGCCAG 57.139 37.500 0.00 0.00 40.46 4.85
3407 5032 5.925509 TCAGTTTTGAACTTACTAGCCAGT 58.074 37.500 0.00 0.00 40.46 4.00
3408 5033 6.354130 TCAGTTTTGAACTTACTAGCCAGTT 58.646 36.000 6.82 6.82 40.46 3.16
3409 5034 6.482308 TCAGTTTTGAACTTACTAGCCAGTTC 59.518 38.462 20.56 20.56 46.26 3.01
3410 5035 6.483640 CAGTTTTGAACTTACTAGCCAGTTCT 59.516 38.462 24.67 10.10 46.24 3.01
3411 5036 6.706716 AGTTTTGAACTTACTAGCCAGTTCTC 59.293 38.462 24.67 16.27 46.24 2.87
3412 5037 6.420913 TTTGAACTTACTAGCCAGTTCTCT 57.579 37.500 24.67 1.38 46.24 3.10
3413 5038 7.534723 TTTGAACTTACTAGCCAGTTCTCTA 57.465 36.000 24.67 13.72 46.24 2.43
3414 5039 7.719871 TTGAACTTACTAGCCAGTTCTCTAT 57.280 36.000 24.67 0.50 46.24 1.98
3415 5040 7.719871 TGAACTTACTAGCCAGTTCTCTATT 57.280 36.000 24.67 0.00 46.24 1.73
3416 5041 8.135382 TGAACTTACTAGCCAGTTCTCTATTT 57.865 34.615 24.67 0.00 46.24 1.40
3417 5042 8.035394 TGAACTTACTAGCCAGTTCTCTATTTG 58.965 37.037 24.67 0.00 46.24 2.32
3418 5043 6.342111 ACTTACTAGCCAGTTCTCTATTTGC 58.658 40.000 0.00 0.00 36.14 3.68
3419 5044 6.155393 ACTTACTAGCCAGTTCTCTATTTGCT 59.845 38.462 0.00 0.00 36.14 3.91
3420 5045 5.428184 ACTAGCCAGTTCTCTATTTGCTT 57.572 39.130 0.00 0.00 0.00 3.91
3421 5046 5.423886 ACTAGCCAGTTCTCTATTTGCTTC 58.576 41.667 0.00 0.00 0.00 3.86
3422 5047 3.265791 AGCCAGTTCTCTATTTGCTTCG 58.734 45.455 0.00 0.00 0.00 3.79
3423 5048 3.003480 GCCAGTTCTCTATTTGCTTCGT 58.997 45.455 0.00 0.00 0.00 3.85
3424 5049 3.437049 GCCAGTTCTCTATTTGCTTCGTT 59.563 43.478 0.00 0.00 0.00 3.85
3425 5050 4.083271 GCCAGTTCTCTATTTGCTTCGTTT 60.083 41.667 0.00 0.00 0.00 3.60
3426 5051 5.385617 CCAGTTCTCTATTTGCTTCGTTTG 58.614 41.667 0.00 0.00 0.00 2.93
3427 5052 5.179368 CCAGTTCTCTATTTGCTTCGTTTGA 59.821 40.000 0.00 0.00 0.00 2.69
3428 5053 6.128172 CCAGTTCTCTATTTGCTTCGTTTGAT 60.128 38.462 0.00 0.00 0.00 2.57
3429 5054 6.958193 CAGTTCTCTATTTGCTTCGTTTGATC 59.042 38.462 0.00 0.00 0.00 2.92
3430 5055 6.876257 AGTTCTCTATTTGCTTCGTTTGATCT 59.124 34.615 0.00 0.00 0.00 2.75
3431 5056 6.893958 TCTCTATTTGCTTCGTTTGATCTC 57.106 37.500 0.00 0.00 0.00 2.75
3432 5057 6.398095 TCTCTATTTGCTTCGTTTGATCTCA 58.602 36.000 0.00 0.00 0.00 3.27
3433 5058 7.044181 TCTCTATTTGCTTCGTTTGATCTCAT 58.956 34.615 0.00 0.00 0.00 2.90
3434 5059 7.223582 TCTCTATTTGCTTCGTTTGATCTCATC 59.776 37.037 0.00 0.00 0.00 2.92
3435 5060 7.044181 TCTATTTGCTTCGTTTGATCTCATCT 58.956 34.615 0.00 0.00 0.00 2.90
3436 5061 4.934075 TTGCTTCGTTTGATCTCATCTG 57.066 40.909 0.00 0.00 0.00 2.90
3437 5062 3.264947 TGCTTCGTTTGATCTCATCTGG 58.735 45.455 0.00 0.00 0.00 3.86
3438 5063 2.611292 GCTTCGTTTGATCTCATCTGGG 59.389 50.000 0.00 0.00 0.00 4.45
3439 5064 3.679917 GCTTCGTTTGATCTCATCTGGGA 60.680 47.826 0.00 0.00 0.00 4.37
3440 5065 4.507710 CTTCGTTTGATCTCATCTGGGAA 58.492 43.478 0.00 0.00 0.00 3.97
3441 5066 3.861840 TCGTTTGATCTCATCTGGGAAC 58.138 45.455 0.00 0.00 0.00 3.62
3442 5067 2.604914 CGTTTGATCTCATCTGGGAACG 59.395 50.000 0.00 0.00 33.78 3.95
3443 5068 3.600388 GTTTGATCTCATCTGGGAACGT 58.400 45.455 0.00 0.00 0.00 3.99
3444 5069 4.676986 CGTTTGATCTCATCTGGGAACGTA 60.677 45.833 0.00 0.00 35.33 3.57
3445 5070 5.360591 GTTTGATCTCATCTGGGAACGTAT 58.639 41.667 0.00 0.00 0.00 3.06
3446 5071 4.855715 TGATCTCATCTGGGAACGTATC 57.144 45.455 0.00 0.00 0.00 2.24
3447 5072 4.215109 TGATCTCATCTGGGAACGTATCA 58.785 43.478 0.00 0.00 0.00 2.15
3448 5073 4.649218 TGATCTCATCTGGGAACGTATCAA 59.351 41.667 0.00 0.00 0.00 2.57
3449 5074 4.655762 TCTCATCTGGGAACGTATCAAG 57.344 45.455 0.00 0.00 0.00 3.02
3450 5075 4.023980 TCTCATCTGGGAACGTATCAAGT 58.976 43.478 0.00 0.00 0.00 3.16
3451 5076 5.198207 TCTCATCTGGGAACGTATCAAGTA 58.802 41.667 0.00 0.00 0.00 2.24
3452 5077 5.833667 TCTCATCTGGGAACGTATCAAGTAT 59.166 40.000 0.00 0.00 0.00 2.12
3453 5078 6.016192 TCTCATCTGGGAACGTATCAAGTATC 60.016 42.308 0.00 0.00 0.00 2.24
3454 5079 5.596772 TCATCTGGGAACGTATCAAGTATCA 59.403 40.000 0.00 0.00 0.00 2.15
3455 5080 5.925506 TCTGGGAACGTATCAAGTATCAA 57.074 39.130 0.00 0.00 0.00 2.57
3456 5081 5.657474 TCTGGGAACGTATCAAGTATCAAC 58.343 41.667 0.00 0.00 0.00 3.18
3457 5082 4.761975 TGGGAACGTATCAAGTATCAACC 58.238 43.478 0.00 0.00 0.00 3.77
3458 5083 3.800506 GGGAACGTATCAAGTATCAACCG 59.199 47.826 0.00 0.00 0.00 4.44
3459 5084 4.427312 GGAACGTATCAAGTATCAACCGT 58.573 43.478 0.00 0.00 0.00 4.83
3460 5085 4.501921 GGAACGTATCAAGTATCAACCGTC 59.498 45.833 0.00 0.00 0.00 4.79
3461 5086 4.707030 ACGTATCAAGTATCAACCGTCA 57.293 40.909 0.00 0.00 0.00 4.35
3462 5087 4.669318 ACGTATCAAGTATCAACCGTCAG 58.331 43.478 0.00 0.00 0.00 3.51
3463 5088 4.397103 ACGTATCAAGTATCAACCGTCAGA 59.603 41.667 0.00 0.00 0.00 3.27
3464 5089 4.733887 CGTATCAAGTATCAACCGTCAGAC 59.266 45.833 0.00 0.00 0.00 3.51
3465 5090 5.448768 CGTATCAAGTATCAACCGTCAGACT 60.449 44.000 0.00 0.00 0.00 3.24
3466 5091 4.866508 TCAAGTATCAACCGTCAGACTT 57.133 40.909 0.00 0.00 0.00 3.01
3467 5092 5.209818 TCAAGTATCAACCGTCAGACTTT 57.790 39.130 0.00 0.00 0.00 2.66
3468 5093 5.607477 TCAAGTATCAACCGTCAGACTTTT 58.393 37.500 0.00 0.00 0.00 2.27
3469 5094 5.465390 TCAAGTATCAACCGTCAGACTTTTG 59.535 40.000 0.00 2.12 0.00 2.44
3470 5095 5.209818 AGTATCAACCGTCAGACTTTTGA 57.790 39.130 13.41 13.41 0.00 2.69
3471 5096 4.989168 AGTATCAACCGTCAGACTTTTGAC 59.011 41.667 13.34 5.70 43.14 3.18
3472 5097 2.557317 TCAACCGTCAGACTTTTGACC 58.443 47.619 8.85 0.00 43.56 4.02
3473 5098 2.093394 TCAACCGTCAGACTTTTGACCA 60.093 45.455 8.85 0.00 43.56 4.02
3474 5099 2.878406 CAACCGTCAGACTTTTGACCAT 59.122 45.455 0.00 0.00 43.56 3.55
3475 5100 4.062293 CAACCGTCAGACTTTTGACCATA 58.938 43.478 0.00 0.00 43.56 2.74
3476 5101 4.345859 ACCGTCAGACTTTTGACCATAA 57.654 40.909 0.00 0.00 43.56 1.90
3477 5102 4.062991 ACCGTCAGACTTTTGACCATAAC 58.937 43.478 0.00 0.00 43.56 1.89
3478 5103 4.062293 CCGTCAGACTTTTGACCATAACA 58.938 43.478 0.00 0.00 43.56 2.41
3479 5104 4.152402 CCGTCAGACTTTTGACCATAACAG 59.848 45.833 0.00 0.00 43.56 3.16
3480 5105 4.377431 CGTCAGACTTTTGACCATAACAGC 60.377 45.833 0.00 0.00 43.56 4.40
3481 5106 4.757149 GTCAGACTTTTGACCATAACAGCT 59.243 41.667 0.00 0.00 41.24 4.24
3482 5107 4.997395 TCAGACTTTTGACCATAACAGCTC 59.003 41.667 0.00 0.00 0.00 4.09
3483 5108 4.756642 CAGACTTTTGACCATAACAGCTCA 59.243 41.667 0.00 0.00 0.00 4.26
3484 5109 5.239306 CAGACTTTTGACCATAACAGCTCAA 59.761 40.000 0.00 0.00 0.00 3.02
3485 5110 5.827797 AGACTTTTGACCATAACAGCTCAAA 59.172 36.000 0.00 0.00 32.16 2.69
3486 5111 6.321181 AGACTTTTGACCATAACAGCTCAAAA 59.679 34.615 6.20 6.20 39.27 2.44
3487 5112 6.273071 ACTTTTGACCATAACAGCTCAAAAC 58.727 36.000 3.03 0.00 37.58 2.43
3488 5113 5.843673 TTTGACCATAACAGCTCAAAACA 57.156 34.783 0.00 0.00 31.31 2.83
3489 5114 6.403866 TTTGACCATAACAGCTCAAAACAT 57.596 33.333 0.00 0.00 31.31 2.71
3490 5115 6.403866 TTGACCATAACAGCTCAAAACATT 57.596 33.333 0.00 0.00 0.00 2.71
3491 5116 6.403866 TGACCATAACAGCTCAAAACATTT 57.596 33.333 0.00 0.00 0.00 2.32
3492 5117 7.517614 TGACCATAACAGCTCAAAACATTTA 57.482 32.000 0.00 0.00 0.00 1.40
3493 5118 7.946207 TGACCATAACAGCTCAAAACATTTAA 58.054 30.769 0.00 0.00 0.00 1.52
3494 5119 8.584157 TGACCATAACAGCTCAAAACATTTAAT 58.416 29.630 0.00 0.00 0.00 1.40
3495 5120 8.986477 ACCATAACAGCTCAAAACATTTAATC 57.014 30.769 0.00 0.00 0.00 1.75
3496 5121 8.034804 ACCATAACAGCTCAAAACATTTAATCC 58.965 33.333 0.00 0.00 0.00 3.01
3497 5122 8.253113 CCATAACAGCTCAAAACATTTAATCCT 58.747 33.333 0.00 0.00 0.00 3.24
3501 5126 8.814038 ACAGCTCAAAACATTTAATCCTATCT 57.186 30.769 0.00 0.00 0.00 1.98
3502 5127 9.247861 ACAGCTCAAAACATTTAATCCTATCTT 57.752 29.630 0.00 0.00 0.00 2.40
3503 5128 9.727627 CAGCTCAAAACATTTAATCCTATCTTC 57.272 33.333 0.00 0.00 0.00 2.87
3504 5129 9.692325 AGCTCAAAACATTTAATCCTATCTTCT 57.308 29.630 0.00 0.00 0.00 2.85
3512 5137 9.566432 ACATTTAATCCTATCTTCTTTAGCAGG 57.434 33.333 0.00 0.00 0.00 4.85
3513 5138 9.784531 CATTTAATCCTATCTTCTTTAGCAGGA 57.215 33.333 0.00 0.00 38.44 3.86
3516 5141 9.784531 TTAATCCTATCTTCTTTAGCAGGAATG 57.215 33.333 0.00 0.00 37.94 2.67
3517 5142 7.623999 ATCCTATCTTCTTTAGCAGGAATGA 57.376 36.000 0.00 0.00 37.94 2.57
3518 5143 7.623999 TCCTATCTTCTTTAGCAGGAATGAT 57.376 36.000 0.00 0.00 34.03 2.45
3519 5144 8.038862 TCCTATCTTCTTTAGCAGGAATGATT 57.961 34.615 0.00 0.00 34.03 2.57
3520 5145 8.497745 TCCTATCTTCTTTAGCAGGAATGATTT 58.502 33.333 0.00 0.00 34.03 2.17
3521 5146 9.784531 CCTATCTTCTTTAGCAGGAATGATTTA 57.215 33.333 0.00 0.00 31.03 1.40
3525 5150 9.911788 TCTTCTTTAGCAGGAATGATTTAATCT 57.088 29.630 6.50 0.00 0.00 2.40
3527 5152 9.685276 TTCTTTAGCAGGAATGATTTAATCTCA 57.315 29.630 6.50 0.00 0.00 3.27
3528 5153 9.857656 TCTTTAGCAGGAATGATTTAATCTCAT 57.142 29.630 6.50 0.00 34.86 2.90
3530 5155 9.857656 TTTAGCAGGAATGATTTAATCTCATCT 57.142 29.630 6.50 0.00 32.22 2.90
3531 5156 7.747155 AGCAGGAATGATTTAATCTCATCTG 57.253 36.000 6.50 9.54 32.22 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.752879 TTAGACCCTGTGCGCCGC 62.753 66.667 4.18 0.00 0.00 6.53
31 32 2.173669 CATTAGACCCTGTGCGCCG 61.174 63.158 4.18 0.00 0.00 6.46
32 33 0.676782 AACATTAGACCCTGTGCGCC 60.677 55.000 4.18 0.00 0.00 6.53
33 34 1.130561 GAAACATTAGACCCTGTGCGC 59.869 52.381 0.00 0.00 0.00 6.09
34 35 2.422597 TGAAACATTAGACCCTGTGCG 58.577 47.619 0.00 0.00 0.00 5.34
35 36 4.518970 TCTTTGAAACATTAGACCCTGTGC 59.481 41.667 0.00 0.00 0.00 4.57
36 37 6.263168 AGTTCTTTGAAACATTAGACCCTGTG 59.737 38.462 0.00 0.00 0.00 3.66
37 38 6.263168 CAGTTCTTTGAAACATTAGACCCTGT 59.737 38.462 0.00 0.00 0.00 4.00
38 39 6.263168 ACAGTTCTTTGAAACATTAGACCCTG 59.737 38.462 0.00 0.00 0.00 4.45
39 40 6.365520 ACAGTTCTTTGAAACATTAGACCCT 58.634 36.000 0.00 0.00 0.00 4.34
40 41 6.635030 ACAGTTCTTTGAAACATTAGACCC 57.365 37.500 0.00 0.00 0.00 4.46
41 42 6.851330 CGAACAGTTCTTTGAAACATTAGACC 59.149 38.462 11.60 0.00 0.00 3.85
42 43 6.357240 GCGAACAGTTCTTTGAAACATTAGAC 59.643 38.462 11.60 0.00 0.00 2.59
43 44 6.260050 AGCGAACAGTTCTTTGAAACATTAGA 59.740 34.615 11.60 0.00 0.00 2.10
44 45 6.430451 AGCGAACAGTTCTTTGAAACATTAG 58.570 36.000 11.60 0.00 0.00 1.73
45 46 6.371809 AGCGAACAGTTCTTTGAAACATTA 57.628 33.333 11.60 0.00 0.00 1.90
46 47 5.248870 AGCGAACAGTTCTTTGAAACATT 57.751 34.783 11.60 0.00 0.00 2.71
47 48 4.900635 AGCGAACAGTTCTTTGAAACAT 57.099 36.364 11.60 0.00 0.00 2.71
48 49 5.804692 TTAGCGAACAGTTCTTTGAAACA 57.195 34.783 11.60 0.00 0.00 2.83
49 50 8.280497 TCTAATTAGCGAACAGTTCTTTGAAAC 58.720 33.333 11.60 0.00 0.00 2.78
50 51 8.373048 TCTAATTAGCGAACAGTTCTTTGAAA 57.627 30.769 11.60 0.00 0.00 2.69
51 52 7.956420 TCTAATTAGCGAACAGTTCTTTGAA 57.044 32.000 11.60 1.27 0.00 2.69
52 53 7.956420 TTCTAATTAGCGAACAGTTCTTTGA 57.044 32.000 11.60 2.68 0.00 2.69
53 54 8.067784 TGTTTCTAATTAGCGAACAGTTCTTTG 58.932 33.333 20.82 0.46 30.87 2.77
54 55 8.149973 TGTTTCTAATTAGCGAACAGTTCTTT 57.850 30.769 20.82 2.14 30.87 2.52
55 56 7.724305 TGTTTCTAATTAGCGAACAGTTCTT 57.276 32.000 20.82 1.29 30.87 2.52
56 57 7.387948 ACATGTTTCTAATTAGCGAACAGTTCT 59.612 33.333 25.05 14.33 34.78 3.01
57 58 7.519002 ACATGTTTCTAATTAGCGAACAGTTC 58.481 34.615 25.05 2.85 34.78 3.01
58 59 7.435068 ACATGTTTCTAATTAGCGAACAGTT 57.565 32.000 25.05 17.28 34.78 3.16
59 60 7.172532 TGAACATGTTTCTAATTAGCGAACAGT 59.827 33.333 25.05 21.19 34.78 3.55
60 61 7.478667 GTGAACATGTTTCTAATTAGCGAACAG 59.521 37.037 25.05 20.82 34.78 3.16
61 62 7.295201 GTGAACATGTTTCTAATTAGCGAACA 58.705 34.615 24.09 24.09 35.31 3.18
62 63 6.461698 CGTGAACATGTTTCTAATTAGCGAAC 59.538 38.462 13.36 17.62 0.00 3.95
63 64 6.366604 TCGTGAACATGTTTCTAATTAGCGAA 59.633 34.615 13.36 2.72 0.00 4.70
64 65 5.865013 TCGTGAACATGTTTCTAATTAGCGA 59.135 36.000 13.36 9.21 0.00 4.93
65 66 6.089920 TCGTGAACATGTTTCTAATTAGCG 57.910 37.500 13.36 7.26 0.00 4.26
66 67 8.175069 TGAATCGTGAACATGTTTCTAATTAGC 58.825 33.333 13.36 0.00 30.97 3.09
69 70 9.743057 TTTTGAATCGTGAACATGTTTCTAATT 57.257 25.926 13.36 10.56 30.97 1.40
70 71 9.912634 ATTTTGAATCGTGAACATGTTTCTAAT 57.087 25.926 13.36 6.66 30.97 1.73
73 74 9.912634 ATTATTTTGAATCGTGAACATGTTTCT 57.087 25.926 13.36 0.00 30.97 2.52
74 75 9.941991 CATTATTTTGAATCGTGAACATGTTTC 57.058 29.630 13.36 5.66 0.00 2.78
75 76 9.474920 ACATTATTTTGAATCGTGAACATGTTT 57.525 25.926 13.36 0.00 0.00 2.83
76 77 9.474920 AACATTATTTTGAATCGTGAACATGTT 57.525 25.926 11.78 11.78 0.00 2.71
77 78 9.474920 AAACATTATTTTGAATCGTGAACATGT 57.525 25.926 0.00 0.00 0.00 3.21
78 79 9.730146 CAAACATTATTTTGAATCGTGAACATG 57.270 29.630 0.00 0.00 38.54 3.21
79 80 8.434661 GCAAACATTATTTTGAATCGTGAACAT 58.565 29.630 0.00 0.00 38.54 2.71
80 81 7.651304 AGCAAACATTATTTTGAATCGTGAACA 59.349 29.630 0.00 0.00 38.54 3.18
81 82 8.006741 AGCAAACATTATTTTGAATCGTGAAC 57.993 30.769 0.00 0.00 38.54 3.18
82 83 9.684448 TTAGCAAACATTATTTTGAATCGTGAA 57.316 25.926 0.00 0.00 38.54 3.18
83 84 9.853555 ATTAGCAAACATTATTTTGAATCGTGA 57.146 25.926 0.00 0.00 38.54 4.35
114 115 9.488124 CATTGTTTTCAAATTCGTGAACATTTT 57.512 25.926 0.00 0.00 43.39 1.82
115 116 8.663911 ACATTGTTTTCAAATTCGTGAACATTT 58.336 25.926 0.00 0.00 43.39 2.32
116 117 8.195617 ACATTGTTTTCAAATTCGTGAACATT 57.804 26.923 0.00 0.00 43.39 2.71
117 118 7.769272 ACATTGTTTTCAAATTCGTGAACAT 57.231 28.000 0.00 0.00 43.39 2.71
118 119 7.329471 TGAACATTGTTTTCAAATTCGTGAACA 59.671 29.630 3.08 0.00 43.39 3.18
119 120 7.630606 GTGAACATTGTTTTCAAATTCGTGAAC 59.369 33.333 3.08 0.00 43.39 3.18
120 121 7.329471 TGTGAACATTGTTTTCAAATTCGTGAA 59.671 29.630 3.08 0.00 43.39 3.18
121 122 6.808704 TGTGAACATTGTTTTCAAATTCGTGA 59.191 30.769 3.08 0.00 43.39 4.35
122 123 6.987223 TGTGAACATTGTTTTCAAATTCGTG 58.013 32.000 3.08 0.00 43.39 4.35
123 124 7.769272 ATGTGAACATTGTTTTCAAATTCGT 57.231 28.000 3.08 0.00 43.39 3.85
124 125 9.146270 GAAATGTGAACATTGTTTTCAAATTCG 57.854 29.630 9.34 0.00 45.06 3.34
125 126 9.985318 TGAAATGTGAACATTGTTTTCAAATTC 57.015 25.926 9.34 13.22 45.06 2.17
126 127 9.991388 CTGAAATGTGAACATTGTTTTCAAATT 57.009 25.926 9.34 7.65 45.06 1.82
127 128 9.381033 TCTGAAATGTGAACATTGTTTTCAAAT 57.619 25.926 9.34 2.81 45.06 2.32
128 129 8.768957 TCTGAAATGTGAACATTGTTTTCAAA 57.231 26.923 9.34 0.82 45.06 2.69
129 130 8.768957 TTCTGAAATGTGAACATTGTTTTCAA 57.231 26.923 9.34 4.55 45.06 2.69
130 131 8.768957 TTTCTGAAATGTGAACATTGTTTTCA 57.231 26.923 9.34 8.18 45.06 2.69
133 134 9.991388 CATTTTTCTGAAATGTGAACATTGTTT 57.009 25.926 9.34 0.00 45.06 2.83
134 135 9.165035 ACATTTTTCTGAAATGTGAACATTGTT 57.835 25.926 14.32 0.63 45.86 2.83
135 136 8.721019 ACATTTTTCTGAAATGTGAACATTGT 57.279 26.923 14.32 6.44 45.86 2.71
136 137 9.640974 GAACATTTTTCTGAAATGTGAACATTG 57.359 29.630 15.43 0.00 46.62 2.82
137 138 8.542132 CGAACATTTTTCTGAAATGTGAACATT 58.458 29.630 15.43 2.80 46.62 2.71
138 139 7.306749 GCGAACATTTTTCTGAAATGTGAACAT 60.307 33.333 15.43 2.67 46.62 2.71
139 140 6.019961 GCGAACATTTTTCTGAAATGTGAACA 60.020 34.615 15.43 0.00 46.62 3.18
140 141 6.198966 AGCGAACATTTTTCTGAAATGTGAAC 59.801 34.615 15.43 9.24 46.62 3.18
141 142 6.272318 AGCGAACATTTTTCTGAAATGTGAA 58.728 32.000 15.43 5.25 46.62 3.18
142 143 5.830912 AGCGAACATTTTTCTGAAATGTGA 58.169 33.333 15.43 0.00 46.62 3.58
143 144 7.621832 TTAGCGAACATTTTTCTGAAATGTG 57.378 32.000 15.43 10.52 46.62 3.21
145 146 9.132521 AGAATTAGCGAACATTTTTCTGAAATG 57.867 29.630 3.31 9.30 41.91 2.32
147 148 9.607285 GTAGAATTAGCGAACATTTTTCTGAAA 57.393 29.630 0.00 0.00 0.00 2.69
148 149 8.779303 TGTAGAATTAGCGAACATTTTTCTGAA 58.221 29.630 3.49 0.00 0.00 3.02
149 150 8.317891 TGTAGAATTAGCGAACATTTTTCTGA 57.682 30.769 3.49 0.00 0.00 3.27
150 151 8.948853 TTGTAGAATTAGCGAACATTTTTCTG 57.051 30.769 3.49 0.00 0.00 3.02
151 152 9.959749 TTTTGTAGAATTAGCGAACATTTTTCT 57.040 25.926 0.00 0.00 0.00 2.52
154 155 9.691362 ACATTTTGTAGAATTAGCGAACATTTT 57.309 25.926 0.00 0.00 0.00 1.82
155 156 9.341899 GACATTTTGTAGAATTAGCGAACATTT 57.658 29.630 0.00 0.00 0.00 2.32
156 157 7.968405 GGACATTTTGTAGAATTAGCGAACATT 59.032 33.333 0.00 0.00 0.00 2.71
157 158 7.120579 TGGACATTTTGTAGAATTAGCGAACAT 59.879 33.333 0.00 0.00 0.00 2.71
158 159 6.428465 TGGACATTTTGTAGAATTAGCGAACA 59.572 34.615 0.00 0.00 0.00 3.18
159 160 6.741358 GTGGACATTTTGTAGAATTAGCGAAC 59.259 38.462 0.00 0.00 0.00 3.95
160 161 6.401688 CGTGGACATTTTGTAGAATTAGCGAA 60.402 38.462 0.00 0.00 0.00 4.70
161 162 5.062934 CGTGGACATTTTGTAGAATTAGCGA 59.937 40.000 0.00 0.00 0.00 4.93
162 163 5.062934 TCGTGGACATTTTGTAGAATTAGCG 59.937 40.000 0.00 0.00 0.00 4.26
163 164 6.417191 TCGTGGACATTTTGTAGAATTAGC 57.583 37.500 0.00 0.00 0.00 3.09
164 165 9.840427 AAATTCGTGGACATTTTGTAGAATTAG 57.160 29.630 1.33 0.00 33.52 1.73
165 166 9.619316 CAAATTCGTGGACATTTTGTAGAATTA 57.381 29.630 1.33 0.00 33.52 1.40
166 167 8.356657 TCAAATTCGTGGACATTTTGTAGAATT 58.643 29.630 0.00 0.00 34.74 2.17
167 168 7.881142 TCAAATTCGTGGACATTTTGTAGAAT 58.119 30.769 0.00 0.00 0.00 2.40
168 169 7.265647 TCAAATTCGTGGACATTTTGTAGAA 57.734 32.000 0.00 0.00 0.00 2.10
169 170 6.869315 TCAAATTCGTGGACATTTTGTAGA 57.131 33.333 0.00 0.00 0.00 2.59
170 171 7.922505 TTTCAAATTCGTGGACATTTTGTAG 57.077 32.000 0.00 0.00 0.00 2.74
171 172 8.703604 TTTTTCAAATTCGTGGACATTTTGTA 57.296 26.923 0.00 0.00 0.00 2.41
172 173 7.602517 TTTTTCAAATTCGTGGACATTTTGT 57.397 28.000 0.00 0.00 0.00 2.83
253 254 8.270799 CATGAACATGTTTTTCAACTCATGAAC 58.729 33.333 20.64 2.48 39.51 3.18
254 255 8.196103 TCATGAACATGTTTTTCAACTCATGAA 58.804 29.630 23.51 13.04 41.24 2.57
255 256 7.714703 TCATGAACATGTTTTTCAACTCATGA 58.285 30.769 22.57 22.57 41.53 3.07
256 257 7.933728 TCATGAACATGTTTTTCAACTCATG 57.066 32.000 19.76 19.76 42.00 3.07
257 258 9.550406 AATTCATGAACATGTTTTTCAACTCAT 57.450 25.926 13.36 6.07 39.72 2.90
258 259 8.945481 AATTCATGAACATGTTTTTCAACTCA 57.055 26.923 13.36 3.70 39.72 3.41
270 271 9.218359 CGAACATTCTCTTAATTCATGAACATG 57.782 33.333 11.07 8.31 40.09 3.21
271 272 7.912250 GCGAACATTCTCTTAATTCATGAACAT 59.088 33.333 11.07 5.55 0.00 2.71
272 273 7.094848 TGCGAACATTCTCTTAATTCATGAACA 60.095 33.333 11.07 0.00 0.00 3.18
273 274 7.243487 TGCGAACATTCTCTTAATTCATGAAC 58.757 34.615 11.07 0.00 0.00 3.18
274 275 7.376435 TGCGAACATTCTCTTAATTCATGAA 57.624 32.000 11.26 11.26 0.00 2.57
275 276 6.983474 TGCGAACATTCTCTTAATTCATGA 57.017 33.333 0.00 0.00 0.00 3.07
276 277 8.624701 ATTTGCGAACATTCTCTTAATTCATG 57.375 30.769 0.00 0.00 0.00 3.07
277 278 9.643693 AAATTTGCGAACATTCTCTTAATTCAT 57.356 25.926 0.00 0.00 0.00 2.57
278 279 9.128107 GAAATTTGCGAACATTCTCTTAATTCA 57.872 29.630 0.00 0.00 0.00 2.57
279 280 9.346725 AGAAATTTGCGAACATTCTCTTAATTC 57.653 29.630 9.70 0.00 0.00 2.17
284 285 9.528018 TTTTTAGAAATTTGCGAACATTCTCTT 57.472 25.926 16.18 1.55 32.87 2.85
308 309 9.603921 ACAATCTCTTGAATTTGTGAACATTTT 57.396 25.926 0.00 0.00 36.20 1.82
309 310 9.603921 AACAATCTCTTGAATTTGTGAACATTT 57.396 25.926 0.00 0.00 36.20 2.32
310 311 9.252962 GAACAATCTCTTGAATTTGTGAACATT 57.747 29.630 0.00 0.00 36.20 2.71
311 312 8.415553 TGAACAATCTCTTGAATTTGTGAACAT 58.584 29.630 0.00 0.00 36.20 2.71
312 313 7.770201 TGAACAATCTCTTGAATTTGTGAACA 58.230 30.769 0.00 0.00 36.20 3.18
313 314 8.807667 ATGAACAATCTCTTGAATTTGTGAAC 57.192 30.769 0.00 0.00 36.20 3.18
314 315 9.251792 CAATGAACAATCTCTTGAATTTGTGAA 57.748 29.630 0.00 0.00 36.20 3.18
315 316 8.631797 TCAATGAACAATCTCTTGAATTTGTGA 58.368 29.630 0.00 0.00 36.20 3.58
316 317 8.806177 TCAATGAACAATCTCTTGAATTTGTG 57.194 30.769 0.00 0.00 36.20 3.33
317 318 9.820725 TTTCAATGAACAATCTCTTGAATTTGT 57.179 25.926 0.00 0.00 37.55 2.83
383 388 7.798596 AGATAGATCGAAGAACATGCAAATT 57.201 32.000 0.00 0.00 43.58 1.82
393 398 7.684670 GCCAAAGAAGGTAGATAGATCGAAGAA 60.685 40.741 0.00 0.00 43.58 2.52
465 471 6.368791 CGTTTAGATCACCTCAAGATTGAACA 59.631 38.462 0.00 0.00 36.64 3.18
477 483 4.866508 TTGTCACTCGTTTAGATCACCT 57.133 40.909 0.00 0.00 0.00 4.00
488 494 5.591067 TGTATTTTCCCTTTTTGTCACTCGT 59.409 36.000 0.00 0.00 0.00 4.18
490 496 6.366061 GCATGTATTTTCCCTTTTTGTCACTC 59.634 38.462 0.00 0.00 0.00 3.51
505 511 8.188139 CGTTTTATCCTTAGTGGCATGTATTTT 58.812 33.333 0.00 0.00 35.26 1.82
610 630 6.920758 AGTATGCATCTCGATGTCTTAACTTC 59.079 38.462 0.19 0.00 40.80 3.01
613 633 5.403766 CCAGTATGCATCTCGATGTCTTAAC 59.596 44.000 0.19 0.00 40.80 2.01
618 638 3.650070 TCCAGTATGCATCTCGATGTC 57.350 47.619 0.19 2.49 40.80 3.06
633 653 0.034477 CCCCAAAACCGCTATCCAGT 60.034 55.000 0.00 0.00 0.00 4.00
775 805 6.421202 GGCAAATGACGTGGTAAACAAATTAA 59.579 34.615 0.00 0.00 0.00 1.40
790 820 2.159430 TCACGAAATCAGGCAAATGACG 59.841 45.455 0.00 0.00 30.46 4.35
792 822 3.673902 TCTCACGAAATCAGGCAAATGA 58.326 40.909 0.00 0.00 0.00 2.57
819 854 5.601313 CCCAGAGGGCATTAGTTTACTACTA 59.399 44.000 0.00 0.00 35.55 1.82
821 856 4.704965 CCCAGAGGGCATTAGTTTACTAC 58.295 47.826 0.00 0.00 35.35 2.73
865 901 2.784347 AGAGGCAAAAGAGGTTACTGC 58.216 47.619 0.00 0.00 0.00 4.40
866 902 8.561738 TTTATTAGAGGCAAAAGAGGTTACTG 57.438 34.615 0.00 0.00 0.00 2.74
867 903 9.397280 GATTTATTAGAGGCAAAAGAGGTTACT 57.603 33.333 0.00 0.00 0.00 2.24
868 904 9.174166 TGATTTATTAGAGGCAAAAGAGGTTAC 57.826 33.333 0.00 0.00 0.00 2.50
961 1683 0.875059 GGTTGGCTCCTTTTGTCTCG 59.125 55.000 0.00 0.00 0.00 4.04
971 1710 2.551912 CCGTTGTGTGGTTGGCTCC 61.552 63.158 0.00 0.00 0.00 4.70
972 1711 3.030652 CCGTTGTGTGGTTGGCTC 58.969 61.111 0.00 0.00 0.00 4.70
975 1714 1.507141 GAGAGCCGTTGTGTGGTTGG 61.507 60.000 0.00 0.00 0.00 3.77
1003 1742 0.253868 TGGGTATGGTGGGGAATCCA 60.254 55.000 0.09 0.00 44.79 3.41
1004 1743 0.185175 GTGGGTATGGTGGGGAATCC 59.815 60.000 0.00 0.00 0.00 3.01
1005 1744 1.133792 CAGTGGGTATGGTGGGGAATC 60.134 57.143 0.00 0.00 0.00 2.52
1006 1745 0.926293 CAGTGGGTATGGTGGGGAAT 59.074 55.000 0.00 0.00 0.00 3.01
1017 1770 2.375509 TCACTCTCACTCTCAGTGGGTA 59.624 50.000 3.48 0.00 46.61 3.69
1040 1801 1.671901 GCTCCGCTCCTAAGCTCACT 61.672 60.000 0.00 0.00 46.91 3.41
1041 1802 1.227118 GCTCCGCTCCTAAGCTCAC 60.227 63.158 0.00 0.00 46.91 3.51
1042 1803 2.775856 CGCTCCGCTCCTAAGCTCA 61.776 63.158 0.00 0.00 46.91 4.26
1043 1804 2.026879 CGCTCCGCTCCTAAGCTC 59.973 66.667 0.00 0.00 46.91 4.09
1044 1805 3.532155 CCGCTCCGCTCCTAAGCT 61.532 66.667 0.00 0.00 46.91 3.74
1045 1806 3.492311 CTCCGCTCCGCTCCTAAGC 62.492 68.421 0.00 0.00 45.56 3.09
1046 1807 2.725008 CTCCGCTCCGCTCCTAAG 59.275 66.667 0.00 0.00 0.00 2.18
1047 1808 3.528370 GCTCCGCTCCGCTCCTAA 61.528 66.667 0.00 0.00 0.00 2.69
1093 1854 2.257691 TCGATTTGGTTTGACCGGAA 57.742 45.000 9.46 0.00 42.58 4.30
1129 1893 4.440829 GCCCGGGAGCCAATTCCA 62.441 66.667 29.31 0.00 39.09 3.53
1340 2129 3.003173 CTTCCTCCGCCACCTCCA 61.003 66.667 0.00 0.00 0.00 3.86
1341 2130 3.787001 CCTTCCTCCGCCACCTCC 61.787 72.222 0.00 0.00 0.00 4.30
1383 2175 1.216710 GTCGTGGAGCTGGAAGAGG 59.783 63.158 0.00 0.00 34.07 3.69
1428 2220 4.570874 GGATCTTGCTCCCCGGGC 62.571 72.222 17.73 4.16 0.00 6.13
1669 2503 4.432741 GGCCTTGGAGGTGGAGCC 62.433 72.222 0.00 0.00 37.80 4.70
1677 2511 4.479993 CTGAGCGGGGCCTTGGAG 62.480 72.222 0.84 0.00 0.00 3.86
1767 2601 3.147595 TCCGTCTCCCGCCATGAG 61.148 66.667 0.00 0.00 34.38 2.90
2135 2981 7.572523 AGAAACATTTCTCTGTCATGAAACA 57.427 32.000 0.00 0.00 43.72 2.83
2176 3022 2.559698 TACACCAGGACACATTGTGG 57.440 50.000 20.33 5.31 37.94 4.17
2177 3023 3.882888 ACTTTACACCAGGACACATTGTG 59.117 43.478 15.18 15.18 39.75 3.33
2178 3024 4.134563 GACTTTACACCAGGACACATTGT 58.865 43.478 0.00 0.00 0.00 2.71
2179 3025 3.502211 GGACTTTACACCAGGACACATTG 59.498 47.826 0.00 0.00 0.00 2.82
2180 3026 3.497942 GGGACTTTACACCAGGACACATT 60.498 47.826 0.00 0.00 0.00 2.71
2181 3027 2.039879 GGGACTTTACACCAGGACACAT 59.960 50.000 0.00 0.00 0.00 3.21
2183 3029 1.697982 AGGGACTTTACACCAGGACAC 59.302 52.381 0.00 0.00 27.25 3.67
2184 3030 1.975680 GAGGGACTTTACACCAGGACA 59.024 52.381 0.00 0.00 41.55 4.02
2246 3129 3.368236 GCTAGTGAACCTGAAACATCGTC 59.632 47.826 0.00 0.00 0.00 4.20
2272 3155 2.423538 GCACTGCAACCAATTACCTAGG 59.576 50.000 7.41 7.41 0.00 3.02
2273 3156 3.081061 TGCACTGCAACCAATTACCTAG 58.919 45.455 0.00 0.00 34.76 3.02
2275 3158 1.993956 TGCACTGCAACCAATTACCT 58.006 45.000 0.00 0.00 34.76 3.08
2276 3159 4.097741 TCATATGCACTGCAACCAATTACC 59.902 41.667 8.03 0.00 43.62 2.85
2278 3161 4.202040 GCTCATATGCACTGCAACCAATTA 60.202 41.667 8.03 0.00 43.62 1.40
2280 3163 2.100252 GCTCATATGCACTGCAACCAAT 59.900 45.455 8.03 0.00 43.62 3.16
2281 3164 1.473677 GCTCATATGCACTGCAACCAA 59.526 47.619 8.03 0.00 43.62 3.67
2282 3165 1.097232 GCTCATATGCACTGCAACCA 58.903 50.000 8.03 0.00 43.62 3.67
2283 3166 1.097232 TGCTCATATGCACTGCAACC 58.903 50.000 8.03 0.00 43.62 3.77
2284 3167 2.421073 TCTTGCTCATATGCACTGCAAC 59.579 45.455 8.03 0.00 43.62 4.17
2285 3168 2.713877 TCTTGCTCATATGCACTGCAA 58.286 42.857 8.03 17.48 43.62 4.08
2286 3169 2.406596 TCTTGCTCATATGCACTGCA 57.593 45.000 6.09 6.09 43.20 4.41
2287 3170 2.876550 TGATCTTGCTCATATGCACTGC 59.123 45.455 0.00 0.00 43.20 4.40
2288 3171 3.875134 TGTGATCTTGCTCATATGCACTG 59.125 43.478 0.00 0.00 43.20 3.66
2289 3172 4.127907 CTGTGATCTTGCTCATATGCACT 58.872 43.478 0.00 0.00 43.20 4.40
2290 3173 3.875727 ACTGTGATCTTGCTCATATGCAC 59.124 43.478 0.00 0.00 43.20 4.57
2291 3174 3.875134 CACTGTGATCTTGCTCATATGCA 59.125 43.478 0.32 0.00 41.65 3.96
2292 3175 3.303857 GCACTGTGATCTTGCTCATATGC 60.304 47.826 12.86 0.00 33.26 3.14
2293 3176 3.059800 CGCACTGTGATCTTGCTCATATG 60.060 47.826 12.86 0.00 33.90 1.78
2294 3177 3.129109 CGCACTGTGATCTTGCTCATAT 58.871 45.455 12.86 0.00 33.90 1.78
2295 3178 2.094026 ACGCACTGTGATCTTGCTCATA 60.094 45.455 12.86 0.00 33.90 2.15
2296 3179 1.338484 ACGCACTGTGATCTTGCTCAT 60.338 47.619 12.86 0.00 33.90 2.90
2297 3180 0.033920 ACGCACTGTGATCTTGCTCA 59.966 50.000 12.86 0.00 33.90 4.26
2298 3181 0.718343 GACGCACTGTGATCTTGCTC 59.282 55.000 12.86 0.00 33.90 4.26
2299 3182 1.010935 CGACGCACTGTGATCTTGCT 61.011 55.000 12.86 0.00 33.90 3.91
2300 3183 1.008875 TCGACGCACTGTGATCTTGC 61.009 55.000 12.86 0.00 0.00 4.01
2301 3184 1.633561 ATCGACGCACTGTGATCTTG 58.366 50.000 12.86 0.00 0.00 3.02
2302 3185 2.796383 GCTATCGACGCACTGTGATCTT 60.796 50.000 12.86 1.84 0.00 2.40
2303 3186 1.268794 GCTATCGACGCACTGTGATCT 60.269 52.381 12.86 0.00 0.00 2.75
2304 3187 1.124462 GCTATCGACGCACTGTGATC 58.876 55.000 12.86 7.18 0.00 2.92
2305 3188 0.249073 GGCTATCGACGCACTGTGAT 60.249 55.000 12.86 0.00 0.00 3.06
2306 3189 1.138883 GGCTATCGACGCACTGTGA 59.861 57.895 12.86 0.00 0.00 3.58
2307 3190 1.878522 GGGCTATCGACGCACTGTG 60.879 63.158 2.76 2.76 0.00 3.66
2308 3191 2.005960 GAGGGCTATCGACGCACTGT 62.006 60.000 17.07 0.00 42.14 3.55
2309 3192 1.299468 GAGGGCTATCGACGCACTG 60.299 63.158 17.07 0.00 42.14 3.66
2310 3193 2.491022 GGAGGGCTATCGACGCACT 61.491 63.158 12.63 12.63 45.38 4.40
2311 3194 2.027751 GGAGGGCTATCGACGCAC 59.972 66.667 10.29 6.76 0.00 5.34
2312 3195 2.441348 TGGAGGGCTATCGACGCA 60.441 61.111 10.29 0.00 0.00 5.24
2331 3214 8.137437 ACGAAGACAACAAATTCTGAATTGATT 58.863 29.630 15.80 10.46 0.00 2.57
2395 3278 4.150897 TGTTGTCCATTATGGTAGCCTC 57.849 45.455 11.39 0.10 39.03 4.70
2401 3284 2.997980 TGCGATGTTGTCCATTATGGT 58.002 42.857 11.39 0.00 39.03 3.55
2407 3290 0.321210 TCCGTTGCGATGTTGTCCAT 60.321 50.000 0.00 0.00 36.13 3.41
2424 3307 4.394712 CACTCCCAGGCACCGTCC 62.395 72.222 0.00 0.00 0.00 4.79
2466 3349 1.336240 ACACCTACAAGTTACCGACGC 60.336 52.381 0.00 0.00 0.00 5.19
2603 3496 1.417517 AGCAGTGTGTCCATCAGTGAA 59.582 47.619 0.00 0.00 38.17 3.18
2605 3498 1.154197 CAGCAGTGTGTCCATCAGTG 58.846 55.000 0.00 0.00 38.72 3.66
2615 3508 3.117794 CCACATCAAAAACAGCAGTGTG 58.882 45.455 0.00 0.00 36.84 3.82
2616 3509 3.023119 TCCACATCAAAAACAGCAGTGT 58.977 40.909 0.00 0.00 39.19 3.55
2617 3510 3.713858 TCCACATCAAAAACAGCAGTG 57.286 42.857 0.00 0.00 0.00 3.66
2619 3512 3.256383 TCCATCCACATCAAAAACAGCAG 59.744 43.478 0.00 0.00 0.00 4.24
2620 3513 3.229293 TCCATCCACATCAAAAACAGCA 58.771 40.909 0.00 0.00 0.00 4.41
2621 3514 3.940209 TCCATCCACATCAAAAACAGC 57.060 42.857 0.00 0.00 0.00 4.40
2622 3515 7.156673 AGAATTTCCATCCACATCAAAAACAG 58.843 34.615 0.00 0.00 0.00 3.16
2623 3516 7.065120 AGAATTTCCATCCACATCAAAAACA 57.935 32.000 0.00 0.00 0.00 2.83
2670 3571 5.198965 CAGGGAATTCATTCAGGAATCAGT 58.801 41.667 7.93 0.00 36.51 3.41
2693 3594 3.983344 CAGTTGTAGCATGGCTTCAAAAC 59.017 43.478 11.06 2.58 44.73 2.43
2696 3597 3.138884 TCAGTTGTAGCATGGCTTCAA 57.861 42.857 6.23 6.23 42.02 2.69
2698 3599 5.818136 TTTATCAGTTGTAGCATGGCTTC 57.182 39.130 0.00 0.00 40.44 3.86
2699 3600 7.941238 AGATATTTATCAGTTGTAGCATGGCTT 59.059 33.333 0.00 0.00 36.29 4.35
2820 3721 7.657761 CCAGTATCAGACTTGTTTAAGTTGACT 59.342 37.037 0.00 0.00 46.79 3.41
2832 3733 1.134995 TGCGAGCCAGTATCAGACTTG 60.135 52.381 0.00 0.00 35.64 3.16
2836 3737 1.756538 TCATTGCGAGCCAGTATCAGA 59.243 47.619 0.00 0.00 0.00 3.27
2959 3861 7.484975 ACTAAAATTCATTCCACACAAACGAA 58.515 30.769 0.00 0.00 0.00 3.85
2962 3864 9.744468 AGTAACTAAAATTCATTCCACACAAAC 57.256 29.630 0.00 0.00 0.00 2.93
3043 4640 7.277174 AGGAGAATTTTCAACCACAGTAAAG 57.723 36.000 0.00 0.00 0.00 1.85
3047 4644 5.449553 AGAAGGAGAATTTTCAACCACAGT 58.550 37.500 0.00 0.00 0.00 3.55
3056 4653 4.094887 TGCACGCATAGAAGGAGAATTTTC 59.905 41.667 0.00 0.00 0.00 2.29
3065 4662 1.003116 GAGCATTGCACGCATAGAAGG 60.003 52.381 11.91 0.00 0.00 3.46
3083 4680 5.046735 TGAAGAGAAGGAACTCATTCAGGAG 60.047 44.000 6.85 0.00 38.49 3.69
3103 4700 9.056005 TGTTTATAAGTTATAGCATGGCTGAAG 57.944 33.333 0.07 0.00 40.10 3.02
3105 4702 8.210946 ACTGTTTATAAGTTATAGCATGGCTGA 58.789 33.333 0.07 0.00 40.10 4.26
3135 4732 2.730550 CAGCAAACAGGTGGAAATCC 57.269 50.000 0.00 0.00 41.98 3.01
3209 4806 3.552294 GCTGAAGCTTATTACGTGAGTCC 59.448 47.826 0.00 0.00 41.22 3.85
3298 4909 5.895636 TGTGTTGGATTAGCGATGAAAAT 57.104 34.783 0.00 0.00 0.00 1.82
3339 4950 9.645059 CTTCTTTATCATAACAACTGAGACAGA 57.355 33.333 5.76 0.00 35.18 3.41
3377 5002 9.730420 GCTAGTAAGTTCAAAACTGAAAATTCA 57.270 29.630 0.00 0.00 41.91 2.57
3398 5023 5.423886 GAAGCAAATAGAGAACTGGCTAGT 58.576 41.667 0.00 0.00 39.32 2.57
3399 5024 4.505922 CGAAGCAAATAGAGAACTGGCTAG 59.494 45.833 0.00 0.00 0.00 3.42
3400 5025 4.081642 ACGAAGCAAATAGAGAACTGGCTA 60.082 41.667 0.00 0.00 0.00 3.93
3401 5026 3.265791 CGAAGCAAATAGAGAACTGGCT 58.734 45.455 0.00 0.00 0.00 4.75
3402 5027 3.003480 ACGAAGCAAATAGAGAACTGGC 58.997 45.455 0.00 0.00 0.00 4.85
3403 5028 5.179368 TCAAACGAAGCAAATAGAGAACTGG 59.821 40.000 0.00 0.00 0.00 4.00
3404 5029 6.228273 TCAAACGAAGCAAATAGAGAACTG 57.772 37.500 0.00 0.00 0.00 3.16
3405 5030 6.876257 AGATCAAACGAAGCAAATAGAGAACT 59.124 34.615 0.00 0.00 0.00 3.01
3406 5031 7.066374 AGATCAAACGAAGCAAATAGAGAAC 57.934 36.000 0.00 0.00 0.00 3.01
3407 5032 6.873605 TGAGATCAAACGAAGCAAATAGAGAA 59.126 34.615 0.00 0.00 0.00 2.87
3408 5033 6.398095 TGAGATCAAACGAAGCAAATAGAGA 58.602 36.000 0.00 0.00 0.00 3.10
3409 5034 6.653273 TGAGATCAAACGAAGCAAATAGAG 57.347 37.500 0.00 0.00 0.00 2.43
3410 5035 7.010830 CAGATGAGATCAAACGAAGCAAATAGA 59.989 37.037 0.00 0.00 0.00 1.98
3411 5036 7.124471 CAGATGAGATCAAACGAAGCAAATAG 58.876 38.462 0.00 0.00 0.00 1.73
3412 5037 6.037500 CCAGATGAGATCAAACGAAGCAAATA 59.962 38.462 0.00 0.00 0.00 1.40
3413 5038 5.163683 CCAGATGAGATCAAACGAAGCAAAT 60.164 40.000 0.00 0.00 0.00 2.32
3414 5039 4.154737 CCAGATGAGATCAAACGAAGCAAA 59.845 41.667 0.00 0.00 0.00 3.68
3415 5040 3.686241 CCAGATGAGATCAAACGAAGCAA 59.314 43.478 0.00 0.00 0.00 3.91
3416 5041 3.264947 CCAGATGAGATCAAACGAAGCA 58.735 45.455 0.00 0.00 0.00 3.91
3417 5042 2.611292 CCCAGATGAGATCAAACGAAGC 59.389 50.000 0.00 0.00 0.00 3.86
3418 5043 4.128925 TCCCAGATGAGATCAAACGAAG 57.871 45.455 0.00 0.00 0.00 3.79
3419 5044 4.253685 GTTCCCAGATGAGATCAAACGAA 58.746 43.478 0.00 0.00 0.00 3.85
3420 5045 3.676049 CGTTCCCAGATGAGATCAAACGA 60.676 47.826 8.72 0.00 40.29 3.85
3421 5046 2.604914 CGTTCCCAGATGAGATCAAACG 59.395 50.000 0.00 2.10 33.36 3.60
3422 5047 3.600388 ACGTTCCCAGATGAGATCAAAC 58.400 45.455 0.00 0.00 0.00 2.93
3423 5048 3.981071 ACGTTCCCAGATGAGATCAAA 57.019 42.857 0.00 0.00 0.00 2.69
3424 5049 4.649218 TGATACGTTCCCAGATGAGATCAA 59.351 41.667 0.00 0.00 0.00 2.57
3425 5050 4.215109 TGATACGTTCCCAGATGAGATCA 58.785 43.478 0.00 0.00 0.00 2.92
3426 5051 4.855715 TGATACGTTCCCAGATGAGATC 57.144 45.455 0.00 0.00 0.00 2.75
3427 5052 4.651503 ACTTGATACGTTCCCAGATGAGAT 59.348 41.667 0.00 0.00 0.00 2.75
3428 5053 4.023980 ACTTGATACGTTCCCAGATGAGA 58.976 43.478 0.00 0.00 0.00 3.27
3429 5054 4.392921 ACTTGATACGTTCCCAGATGAG 57.607 45.455 0.00 0.00 0.00 2.90
3430 5055 5.596772 TGATACTTGATACGTTCCCAGATGA 59.403 40.000 0.00 0.00 0.00 2.92
3431 5056 5.842907 TGATACTTGATACGTTCCCAGATG 58.157 41.667 0.00 0.00 0.00 2.90
3432 5057 6.281405 GTTGATACTTGATACGTTCCCAGAT 58.719 40.000 0.00 0.00 0.00 2.90
3433 5058 5.394883 GGTTGATACTTGATACGTTCCCAGA 60.395 44.000 0.00 0.00 0.00 3.86
3434 5059 4.809426 GGTTGATACTTGATACGTTCCCAG 59.191 45.833 0.00 0.00 0.00 4.45
3435 5060 4.678574 CGGTTGATACTTGATACGTTCCCA 60.679 45.833 0.00 0.00 0.00 4.37
3436 5061 3.800506 CGGTTGATACTTGATACGTTCCC 59.199 47.826 0.00 0.00 0.00 3.97
3437 5062 4.427312 ACGGTTGATACTTGATACGTTCC 58.573 43.478 0.00 0.00 0.00 3.62
3438 5063 5.097529 TGACGGTTGATACTTGATACGTTC 58.902 41.667 0.00 0.00 33.09 3.95
3439 5064 5.063180 TGACGGTTGATACTTGATACGTT 57.937 39.130 0.00 0.00 33.09 3.99
3440 5065 4.397103 TCTGACGGTTGATACTTGATACGT 59.603 41.667 0.00 0.00 35.89 3.57
3441 5066 4.733887 GTCTGACGGTTGATACTTGATACG 59.266 45.833 0.00 0.00 0.00 3.06
3442 5067 5.892568 AGTCTGACGGTTGATACTTGATAC 58.107 41.667 1.52 0.00 0.00 2.24
3443 5068 6.525578 AAGTCTGACGGTTGATACTTGATA 57.474 37.500 1.52 0.00 0.00 2.15
3444 5069 5.407407 AAGTCTGACGGTTGATACTTGAT 57.593 39.130 1.52 0.00 0.00 2.57
3445 5070 4.866508 AAGTCTGACGGTTGATACTTGA 57.133 40.909 1.52 0.00 0.00 3.02
3446 5071 5.465390 TCAAAAGTCTGACGGTTGATACTTG 59.535 40.000 18.91 5.47 0.00 3.16
3447 5072 5.465724 GTCAAAAGTCTGACGGTTGATACTT 59.534 40.000 22.96 1.20 36.64 2.24
3448 5073 4.989168 GTCAAAAGTCTGACGGTTGATACT 59.011 41.667 22.96 0.00 36.64 2.12
3449 5074 4.151867 GGTCAAAAGTCTGACGGTTGATAC 59.848 45.833 22.96 17.62 45.60 2.24
3450 5075 4.202274 TGGTCAAAAGTCTGACGGTTGATA 60.202 41.667 22.96 16.02 45.60 2.15
3451 5076 3.139077 GGTCAAAAGTCTGACGGTTGAT 58.861 45.455 22.96 0.00 45.60 2.57
3452 5077 2.093394 TGGTCAAAAGTCTGACGGTTGA 60.093 45.455 18.91 18.91 45.60 3.18
3453 5078 2.285083 TGGTCAAAAGTCTGACGGTTG 58.715 47.619 15.89 15.89 45.60 3.77
3454 5079 2.702592 TGGTCAAAAGTCTGACGGTT 57.297 45.000 1.52 0.00 45.60 4.44
3455 5080 2.930826 ATGGTCAAAAGTCTGACGGT 57.069 45.000 1.52 0.00 45.60 4.83
3456 5081 4.062293 TGTTATGGTCAAAAGTCTGACGG 58.938 43.478 1.52 0.00 45.60 4.79
3457 5082 4.377431 GCTGTTATGGTCAAAAGTCTGACG 60.377 45.833 1.52 0.00 45.60 4.35
3458 5083 4.757149 AGCTGTTATGGTCAAAAGTCTGAC 59.243 41.667 0.00 0.00 44.21 3.51
3459 5084 4.973168 AGCTGTTATGGTCAAAAGTCTGA 58.027 39.130 0.00 0.00 0.00 3.27
3460 5085 4.756642 TGAGCTGTTATGGTCAAAAGTCTG 59.243 41.667 0.00 0.00 40.82 3.51
3461 5086 4.973168 TGAGCTGTTATGGTCAAAAGTCT 58.027 39.130 0.00 0.00 40.82 3.24
3462 5087 5.689383 TTGAGCTGTTATGGTCAAAAGTC 57.311 39.130 0.00 0.00 46.88 3.01
3468 5093 6.403866 AAATGTTTTGAGCTGTTATGGTCA 57.596 33.333 0.00 0.00 41.85 4.02
3469 5094 8.986477 ATTAAATGTTTTGAGCTGTTATGGTC 57.014 30.769 0.00 0.00 35.28 4.02
3470 5095 8.034804 GGATTAAATGTTTTGAGCTGTTATGGT 58.965 33.333 0.00 0.00 0.00 3.55
3471 5096 8.253113 AGGATTAAATGTTTTGAGCTGTTATGG 58.747 33.333 0.00 0.00 0.00 2.74
3475 5100 9.247861 AGATAGGATTAAATGTTTTGAGCTGTT 57.752 29.630 0.00 0.00 0.00 3.16
3476 5101 8.814038 AGATAGGATTAAATGTTTTGAGCTGT 57.186 30.769 0.00 0.00 0.00 4.40
3477 5102 9.727627 GAAGATAGGATTAAATGTTTTGAGCTG 57.272 33.333 0.00 0.00 0.00 4.24
3478 5103 9.692325 AGAAGATAGGATTAAATGTTTTGAGCT 57.308 29.630 0.00 0.00 0.00 4.09
3486 5111 9.566432 CCTGCTAAAGAAGATAGGATTAAATGT 57.434 33.333 0.00 0.00 34.59 2.71
3487 5112 9.784531 TCCTGCTAAAGAAGATAGGATTAAATG 57.215 33.333 0.00 0.00 36.03 2.32
3490 5115 9.784531 CATTCCTGCTAAAGAAGATAGGATTAA 57.215 33.333 0.00 0.00 38.88 1.40
3491 5116 9.159254 TCATTCCTGCTAAAGAAGATAGGATTA 57.841 33.333 0.00 0.00 38.88 1.75
3492 5117 8.038862 TCATTCCTGCTAAAGAAGATAGGATT 57.961 34.615 0.00 0.00 38.88 3.01
3493 5118 7.623999 TCATTCCTGCTAAAGAAGATAGGAT 57.376 36.000 0.00 0.00 38.88 3.24
3494 5119 7.623999 ATCATTCCTGCTAAAGAAGATAGGA 57.376 36.000 0.00 0.00 37.96 2.94
3495 5120 8.688747 AAATCATTCCTGCTAAAGAAGATAGG 57.311 34.615 0.00 0.00 34.20 2.57
3499 5124 9.911788 AGATTAAATCATTCCTGCTAAAGAAGA 57.088 29.630 0.00 0.00 0.00 2.87
3501 5126 9.685276 TGAGATTAAATCATTCCTGCTAAAGAA 57.315 29.630 0.00 0.00 0.00 2.52
3502 5127 9.857656 ATGAGATTAAATCATTCCTGCTAAAGA 57.142 29.630 1.67 0.00 33.60 2.52
3504 5129 9.857656 AGATGAGATTAAATCATTCCTGCTAAA 57.142 29.630 7.69 0.00 37.52 1.85
3505 5130 9.281371 CAGATGAGATTAAATCATTCCTGCTAA 57.719 33.333 7.69 0.00 37.52 3.09
3506 5131 8.843885 CAGATGAGATTAAATCATTCCTGCTA 57.156 34.615 7.69 0.00 37.52 3.49
3507 5132 7.747155 CAGATGAGATTAAATCATTCCTGCT 57.253 36.000 7.69 0.00 37.52 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.