Multiple sequence alignment - TraesCS6D01G000800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G000800 chr6D 100.000 4714 0 0 1 4714 386724 391437 0.000000e+00 8706.0
1 TraesCS6D01G000800 chrUn 97.776 3058 66 2 654 3709 245875164 245872107 0.000000e+00 5269.0
2 TraesCS6D01G000800 chrUn 97.807 3055 65 2 654 3706 260283755 260286809 0.000000e+00 5269.0
3 TraesCS6D01G000800 chrUn 96.662 659 13 3 1 659 245876096 245875447 0.000000e+00 1086.0
4 TraesCS6D01G000800 chrUn 96.799 656 12 3 1 656 260282823 260283469 0.000000e+00 1086.0
5 TraesCS6D01G000800 chrUn 89.320 103 10 1 4185 4286 245871963 245871861 1.380000e-25 128.0
6 TraesCS6D01G000800 chrUn 91.489 94 7 1 4185 4277 260286956 260287049 1.380000e-25 128.0
7 TraesCS6D01G000800 chrUn 94.030 67 2 1 3701 3765 245872053 245871987 3.000000e-17 100.0
8 TraesCS6D01G000800 chrUn 94.030 67 2 1 3701 3765 260286866 260286932 3.000000e-17 100.0
9 TraesCS6D01G000800 chr4D 83.333 3060 467 29 674 3712 1398212 1401249 0.000000e+00 2785.0
10 TraesCS6D01G000800 chr3A 82.278 3064 487 39 676 3715 36246492 36249523 0.000000e+00 2599.0
11 TraesCS6D01G000800 chr3A 82.866 2638 436 13 674 3306 36300270 36302896 0.000000e+00 2353.0
12 TraesCS6D01G000800 chr3A 83.443 1214 183 12 2515 3715 36480710 36479502 0.000000e+00 1112.0
13 TraesCS6D01G000800 chr3A 79.333 600 91 20 3131 3715 36286067 36286648 1.590000e-104 390.0
14 TraesCS6D01G000800 chr3D 82.038 3062 502 26 674 3715 26300870 26303903 0.000000e+00 2564.0
15 TraesCS6D01G000800 chr3D 81.973 3051 510 31 674 3712 26290818 26293840 0.000000e+00 2551.0
16 TraesCS6D01G000800 chr3D 82.142 3035 483 38 707 3712 26271147 26274151 0.000000e+00 2547.0
17 TraesCS6D01G000800 chr3D 81.844 358 50 6 3362 3715 26284814 26285160 2.150000e-73 287.0
18 TraesCS6D01G000800 chr3B 81.545 3067 500 50 676 3712 43818677 43821707 0.000000e+00 2468.0
19 TraesCS6D01G000800 chr3B 82.133 1819 282 31 1915 3715 43836572 43838365 0.000000e+00 1519.0
20 TraesCS6D01G000800 chr3B 82.394 1721 278 20 1999 3712 43850374 43852076 0.000000e+00 1476.0
21 TraesCS6D01G000800 chr2B 88.808 411 22 7 242 650 755637154 755636766 2.550000e-132 483.0
22 TraesCS6D01G000800 chr2B 95.105 143 7 0 49 191 755643843 755643701 4.750000e-55 226.0
23 TraesCS6D01G000800 chr2B 96.923 65 2 0 3701 3765 755631045 755630981 4.990000e-20 110.0
24 TraesCS6D01G000800 chr7D 86.219 283 18 9 3765 4039 631377046 631376777 2.150000e-73 287.0
25 TraesCS6D01G000800 chr5D 86.758 219 17 8 3765 3979 547832699 547832489 2.840000e-57 233.0
26 TraesCS6D01G000800 chr4B 85.185 243 19 10 3765 4001 664326587 664326818 2.840000e-57 233.0
27 TraesCS6D01G000800 chr2A 87.500 208 18 2 3776 3983 25196104 25196303 2.840000e-57 233.0
28 TraesCS6D01G000800 chr2A 87.500 208 18 2 3776 3983 25228351 25228550 2.840000e-57 233.0
29 TraesCS6D01G000800 chr2A 87.500 208 18 2 3776 3983 25276474 25276673 2.840000e-57 233.0
30 TraesCS6D01G000800 chr2A 87.745 204 17 2 3776 3979 25280193 25280388 1.020000e-56 231.0
31 TraesCS6D01G000800 chr2A 86.486 222 15 6 3765 3979 25200961 25201174 3.670000e-56 230.0
32 TraesCS6D01G000800 chr2A 86.486 222 15 6 3765 3979 25232055 25232268 3.670000e-56 230.0
33 TraesCS6D01G000800 chr7A 100.000 28 0 0 4264 4291 2581678 2581705 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G000800 chr6D 386724 391437 4713 False 8706.00 8706 100.00000 1 4714 1 chr6D.!!$F1 4713
1 TraesCS6D01G000800 chrUn 245871861 245876096 4235 True 1645.75 5269 94.44700 1 4286 4 chrUn.!!$R1 4285
2 TraesCS6D01G000800 chrUn 260282823 260287049 4226 False 1645.75 5269 95.03125 1 4277 4 chrUn.!!$F1 4276
3 TraesCS6D01G000800 chr4D 1398212 1401249 3037 False 2785.00 2785 83.33300 674 3712 1 chr4D.!!$F1 3038
4 TraesCS6D01G000800 chr3A 36246492 36249523 3031 False 2599.00 2599 82.27800 676 3715 1 chr3A.!!$F1 3039
5 TraesCS6D01G000800 chr3A 36300270 36302896 2626 False 2353.00 2353 82.86600 674 3306 1 chr3A.!!$F3 2632
6 TraesCS6D01G000800 chr3A 36479502 36480710 1208 True 1112.00 1112 83.44300 2515 3715 1 chr3A.!!$R1 1200
7 TraesCS6D01G000800 chr3A 36286067 36286648 581 False 390.00 390 79.33300 3131 3715 1 chr3A.!!$F2 584
8 TraesCS6D01G000800 chr3D 26300870 26303903 3033 False 2564.00 2564 82.03800 674 3715 1 chr3D.!!$F4 3041
9 TraesCS6D01G000800 chr3D 26290818 26293840 3022 False 2551.00 2551 81.97300 674 3712 1 chr3D.!!$F3 3038
10 TraesCS6D01G000800 chr3D 26271147 26274151 3004 False 2547.00 2547 82.14200 707 3712 1 chr3D.!!$F1 3005
11 TraesCS6D01G000800 chr3B 43818677 43821707 3030 False 2468.00 2468 81.54500 676 3712 1 chr3B.!!$F1 3036
12 TraesCS6D01G000800 chr3B 43836572 43838365 1793 False 1519.00 1519 82.13300 1915 3715 1 chr3B.!!$F2 1800
13 TraesCS6D01G000800 chr3B 43850374 43852076 1702 False 1476.00 1476 82.39400 1999 3712 1 chr3B.!!$F3 1713
14 TraesCS6D01G000800 chr2A 25276474 25280388 3914 False 232.00 233 87.62250 3776 3983 2 chr2A.!!$F4 207
15 TraesCS6D01G000800 chr2A 25228351 25232268 3917 False 231.50 233 86.99300 3765 3983 2 chr2A.!!$F3 218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 1.302431 CCCACCAAGCATGTGTCGA 60.302 57.895 0.00 0.00 31.71 4.20 F
356 357 1.684049 CCTCTCTCTGCCCTTCGGT 60.684 63.158 0.00 0.00 0.00 4.69 F
433 434 2.675317 CGCACGGAAGAAGAAGAAGGAT 60.675 50.000 0.00 0.00 0.00 3.24 F
487 488 2.816689 CACGATCCATGCATGCATTTT 58.183 42.857 30.32 17.37 33.90 1.82 F
2486 2786 0.912486 GGTGGGCCATCAGAGTTACT 59.088 55.000 13.13 0.00 34.09 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1332 1628 1.202651 CCGTTGAGACCAAGGTCAAGT 60.203 52.381 20.52 0.54 46.76 3.16 R
1828 2127 1.482593 GACAGATCCAATCCACTCCGT 59.517 52.381 0.00 0.00 0.00 4.69 R
2247 2546 1.559682 GAAGAGGGAATACTGCCACCA 59.440 52.381 0.00 0.00 34.87 4.17 R
2567 2867 7.023171 ACCATACCAAGTAAAACCATACTGA 57.977 36.000 0.00 0.00 36.28 3.41 R
4474 6580 0.032815 TTCGACATGAGGCGTCAACA 59.967 50.000 13.87 0.00 35.88 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 4.287766 ACTAAGAAGCCTTTTCCATCGT 57.712 40.909 0.00 0.00 33.94 3.73
196 197 3.119459 CGCACTACACTCATAAGACCACT 60.119 47.826 0.00 0.00 0.00 4.00
247 248 1.302431 CCCACCAAGCATGTGTCGA 60.302 57.895 0.00 0.00 31.71 4.20
277 278 2.071778 ATAAATCAAGGCCGCCATGT 57.928 45.000 13.15 0.00 0.00 3.21
356 357 1.684049 CCTCTCTCTGCCCTTCGGT 60.684 63.158 0.00 0.00 0.00 4.69
433 434 2.675317 CGCACGGAAGAAGAAGAAGGAT 60.675 50.000 0.00 0.00 0.00 3.24
487 488 2.816689 CACGATCCATGCATGCATTTT 58.183 42.857 30.32 17.37 33.90 1.82
488 489 3.796165 GCACGATCCATGCATGCATTTTA 60.796 43.478 30.32 18.18 42.88 1.52
489 490 4.552355 CACGATCCATGCATGCATTTTAT 58.448 39.130 30.32 21.78 33.90 1.40
490 491 4.986034 CACGATCCATGCATGCATTTTATT 59.014 37.500 30.32 13.46 33.90 1.40
491 492 5.464057 CACGATCCATGCATGCATTTTATTT 59.536 36.000 30.32 12.07 33.90 1.40
492 493 6.641723 CACGATCCATGCATGCATTTTATTTA 59.358 34.615 30.32 10.94 33.90 1.40
493 494 7.329962 CACGATCCATGCATGCATTTTATTTAT 59.670 33.333 30.32 14.84 33.90 1.40
494 495 7.874016 ACGATCCATGCATGCATTTTATTTATT 59.126 29.630 30.32 3.61 33.90 1.40
495 496 8.166066 CGATCCATGCATGCATTTTATTTATTG 58.834 33.333 30.32 16.12 33.90 1.90
703 992 3.198068 GCAAATGAGACAGATCGGCTAA 58.802 45.455 0.00 0.00 0.00 3.09
788 1077 6.717289 ACAATAGCACCCACTTCTGTAATTA 58.283 36.000 0.00 0.00 0.00 1.40
843 1135 4.988540 CCACATCGTGTCAGTTCTCTAAAA 59.011 41.667 0.00 0.00 0.00 1.52
851 1143 7.221452 TCGTGTCAGTTCTCTAAAACTTACAAC 59.779 37.037 5.61 1.74 42.11 3.32
1463 1759 6.483640 GGGCACATTCCTAGTTCATTAAGTAG 59.516 42.308 0.00 0.00 38.06 2.57
1482 1778 6.710597 AGTAGTGCTTCCAATCTATACGAA 57.289 37.500 0.00 0.00 0.00 3.85
1715 2011 4.354087 AGGTAACCTTTCCAATCAACTCCT 59.646 41.667 0.00 0.00 37.17 3.69
1828 2127 7.122055 GGATGAATCAATTTACAGGTGTGGTTA 59.878 37.037 0.00 0.00 0.00 2.85
1868 2167 6.016024 TCTGTCAAGATTTTGCAGCAATTAGT 60.016 34.615 9.12 0.00 37.86 2.24
1956 2255 4.076394 AGCTCTATCTATCCTCGAACCAC 58.924 47.826 0.00 0.00 0.00 4.16
2046 2345 3.852578 ACAATCTTCATGGTAGGGTTCCT 59.147 43.478 0.00 0.00 37.71 3.36
2109 2408 8.992835 ATTTTTCTTTCAACAATCTAGATGGC 57.007 30.769 5.86 0.00 0.00 4.40
2486 2786 0.912486 GGTGGGCCATCAGAGTTACT 59.088 55.000 13.13 0.00 34.09 2.24
2567 2867 8.275040 AGTGCTCAAAGTAGTTATCCCAATAAT 58.725 33.333 0.00 0.00 30.28 1.28
2585 2885 8.413229 CCCAATAATCAGTATGGTTTTACTTGG 58.587 37.037 0.00 0.00 34.28 3.61
2625 2925 6.602406 GCATATTGATATGGAGAGGAAAGCAT 59.398 38.462 11.75 0.00 40.31 3.79
2766 3066 9.303116 AGATACAGTTCTGTATATCGAGGAAAT 57.697 33.333 20.76 1.89 35.36 2.17
2964 3264 1.062587 GTGTATGAGTTCATGCCACGC 59.937 52.381 4.90 0.00 38.04 5.34
3049 3350 6.656693 CCTTCTTACAATGAGTCAAAGGATGT 59.343 38.462 10.73 7.57 36.28 3.06
3109 3410 2.358898 CACCAGAACAACCAAGGAACAG 59.641 50.000 0.00 0.00 0.00 3.16
3110 3411 1.338020 CCAGAACAACCAAGGAACAGC 59.662 52.381 0.00 0.00 0.00 4.40
3337 3675 6.624423 AGCTTTTCTGCATATGTGTTAAAGG 58.376 36.000 4.29 2.93 34.99 3.11
3383 3726 3.717707 TCATTCTGTAGAATACGCAGGC 58.282 45.455 6.79 0.00 46.99 4.85
3593 3938 1.322442 GCCAAGAAACTCCAACAGCT 58.678 50.000 0.00 0.00 0.00 4.24
3686 4031 0.039256 ATGAACGCACCAACATGCAC 60.039 50.000 0.00 0.00 46.47 4.57
3735 4142 6.408858 AAGTAAGCTGTCGTATGTTTGATG 57.591 37.500 0.00 0.00 0.00 3.07
3758 4167 8.830201 ATGTTTTATTGCATTGTGTGTGTAAT 57.170 26.923 0.00 0.00 36.22 1.89
3765 4174 4.277921 TGCATTGTGTGTGTAATGACATGT 59.722 37.500 0.00 0.00 38.04 3.21
3767 4176 5.794945 GCATTGTGTGTGTAATGACATGTAC 59.205 40.000 0.00 0.00 38.04 2.90
3770 4179 7.561021 TTGTGTGTGTAATGACATGTACTTT 57.439 32.000 0.00 0.43 38.04 2.66
3772 4181 6.203915 TGTGTGTGTAATGACATGTACTTTCC 59.796 38.462 0.00 0.00 38.04 3.13
3773 4182 5.407084 TGTGTGTAATGACATGTACTTTCCG 59.593 40.000 0.00 0.00 38.04 4.30
3774 4183 4.932799 TGTGTAATGACATGTACTTTCCGG 59.067 41.667 0.00 0.00 38.04 5.14
3775 4184 3.936453 TGTAATGACATGTACTTTCCGGC 59.064 43.478 0.00 0.00 0.00 6.13
3776 4185 1.651987 ATGACATGTACTTTCCGGCG 58.348 50.000 0.00 0.00 0.00 6.46
3777 4186 0.604073 TGACATGTACTTTCCGGCGA 59.396 50.000 9.30 0.00 0.00 5.54
3778 4187 0.997196 GACATGTACTTTCCGGCGAC 59.003 55.000 9.30 0.00 0.00 5.19
3780 4189 0.719465 CATGTACTTTCCGGCGACAC 59.281 55.000 9.30 0.00 0.00 3.67
3793 4202 2.332514 GACACCCGACGACGAACA 59.667 61.111 9.28 0.00 42.66 3.18
3808 4217 2.286184 ACGAACAATGACGAAGCAACAC 60.286 45.455 10.57 0.00 0.00 3.32
3810 4219 3.183574 CGAACAATGACGAAGCAACACTA 59.816 43.478 0.00 0.00 0.00 2.74
3863 4272 1.751552 CCCGACGAGATACTTTACGC 58.248 55.000 0.00 0.00 0.00 4.42
3903 4312 4.864704 GCTAGCCTGATTTACTCTAGCT 57.135 45.455 2.29 0.00 45.14 3.32
3905 4314 5.949735 GCTAGCCTGATTTACTCTAGCTAG 58.050 45.833 15.01 15.01 45.88 3.42
3906 4315 4.864704 AGCCTGATTTACTCTAGCTAGC 57.135 45.455 16.35 6.62 33.07 3.42
3907 4316 3.576550 AGCCTGATTTACTCTAGCTAGCC 59.423 47.826 16.35 0.00 33.07 3.93
3908 4317 3.322254 GCCTGATTTACTCTAGCTAGCCA 59.678 47.826 16.35 0.00 0.00 4.75
3910 4319 4.541779 CTGATTTACTCTAGCTAGCCACG 58.458 47.826 16.35 6.74 0.00 4.94
3911 4320 3.952323 TGATTTACTCTAGCTAGCCACGT 59.048 43.478 16.35 11.82 0.00 4.49
3912 4321 4.036498 TGATTTACTCTAGCTAGCCACGTC 59.964 45.833 16.35 9.71 0.00 4.34
3913 4322 1.964552 TACTCTAGCTAGCCACGTCC 58.035 55.000 16.35 0.00 0.00 4.79
3914 4323 0.034380 ACTCTAGCTAGCCACGTCCA 60.034 55.000 16.35 0.00 0.00 4.02
3915 4324 1.103803 CTCTAGCTAGCCACGTCCAA 58.896 55.000 16.35 0.00 0.00 3.53
3916 4325 1.066303 CTCTAGCTAGCCACGTCCAAG 59.934 57.143 16.35 0.98 0.00 3.61
3917 4326 0.528684 CTAGCTAGCCACGTCCAAGC 60.529 60.000 12.13 0.00 0.00 4.01
3918 4327 0.970937 TAGCTAGCCACGTCCAAGCT 60.971 55.000 12.13 13.72 45.14 3.74
3944 4353 3.847542 AGCTAGCTCGATATTGCTGATG 58.152 45.455 12.68 0.00 40.08 3.07
3946 4355 3.616076 GCTAGCTCGATATTGCTGATGGT 60.616 47.826 7.70 0.00 40.08 3.55
3954 4363 4.614946 GATATTGCTGATGGTTTCTTGCC 58.385 43.478 0.00 0.00 0.00 4.52
3956 4365 1.153958 GCTGATGGTTTCTTGCCGC 60.154 57.895 0.00 0.00 0.00 6.53
3958 4367 1.228398 TGATGGTTTCTTGCCGCCA 60.228 52.632 0.00 0.00 35.28 5.69
3962 4371 4.404654 GTTTCTTGCCGCCAGCCG 62.405 66.667 0.00 0.00 42.71 5.52
3975 4384 0.446222 CCAGCCGGAATACAACAACG 59.554 55.000 5.05 0.00 0.00 4.10
3979 4388 0.869068 CCGGAATACAACAACGCACA 59.131 50.000 0.00 0.00 0.00 4.57
3983 4392 2.294829 GAATACAACAACGCACACACG 58.705 47.619 0.00 0.00 39.50 4.49
3993 4402 3.738482 GCACACACGCGAAACAATA 57.262 47.368 15.93 0.00 0.00 1.90
3994 4403 2.241259 GCACACACGCGAAACAATAT 57.759 45.000 15.93 0.00 0.00 1.28
3995 4404 2.580589 GCACACACGCGAAACAATATT 58.419 42.857 15.93 0.00 0.00 1.28
3996 4405 2.338228 GCACACACGCGAAACAATATTG 59.662 45.455 15.93 14.01 0.00 1.90
3998 4407 4.402583 CACACACGCGAAACAATATTGAT 58.597 39.130 22.16 7.48 0.00 2.57
3999 4408 4.491942 CACACACGCGAAACAATATTGATC 59.508 41.667 22.16 16.63 0.00 2.92
4000 4409 3.714016 CACACGCGAAACAATATTGATCG 59.286 43.478 28.04 28.04 40.86 3.69
4005 4414 3.279950 CGAAACAATATTGATCGCCACG 58.720 45.455 22.16 12.19 35.59 4.94
4006 4415 3.617669 GAAACAATATTGATCGCCACGG 58.382 45.455 22.16 0.00 0.00 4.94
4007 4416 2.325583 ACAATATTGATCGCCACGGT 57.674 45.000 22.16 0.00 0.00 4.83
4008 4417 2.210116 ACAATATTGATCGCCACGGTC 58.790 47.619 22.16 0.00 37.52 4.79
4009 4418 1.192312 CAATATTGATCGCCACGGTCG 59.808 52.381 10.04 0.00 40.17 4.79
4010 4419 0.944311 ATATTGATCGCCACGGTCGC 60.944 55.000 0.00 0.00 40.17 5.19
4011 4420 2.011741 TATTGATCGCCACGGTCGCT 62.012 55.000 0.00 0.00 40.17 4.93
4026 4462 3.489059 CGGTCGCTCCCGTAATTACTTTA 60.489 47.826 13.56 0.00 43.07 1.85
4027 4463 4.625028 GGTCGCTCCCGTAATTACTTTAT 58.375 43.478 13.56 0.00 35.54 1.40
4028 4464 5.052481 GGTCGCTCCCGTAATTACTTTATT 58.948 41.667 13.56 0.00 35.54 1.40
4030 4466 6.037500 GGTCGCTCCCGTAATTACTTTATTTT 59.962 38.462 13.56 0.00 35.54 1.82
4031 4467 6.903479 GTCGCTCCCGTAATTACTTTATTTTG 59.097 38.462 13.56 0.00 35.54 2.44
4033 4469 6.457799 CGCTCCCGTAATTACTTTATTTTGCT 60.458 38.462 13.56 0.00 0.00 3.91
4034 4470 7.255569 GCTCCCGTAATTACTTTATTTTGCTT 58.744 34.615 13.56 0.00 0.00 3.91
4039 4475 9.490663 CCGTAATTACTTTATTTTGCTTCTCAG 57.509 33.333 13.56 0.00 0.00 3.35
4043 4479 7.833285 TTACTTTATTTTGCTTCTCAGGGTT 57.167 32.000 0.00 0.00 0.00 4.11
4044 4480 8.927675 TTACTTTATTTTGCTTCTCAGGGTTA 57.072 30.769 0.00 0.00 0.00 2.85
4045 4481 7.454260 ACTTTATTTTGCTTCTCAGGGTTAG 57.546 36.000 0.00 0.00 0.00 2.34
4047 4483 7.724061 ACTTTATTTTGCTTCTCAGGGTTAGAA 59.276 33.333 0.00 0.00 0.00 2.10
4050 4486 5.964958 TTTGCTTCTCAGGGTTAGAATTG 57.035 39.130 0.00 0.00 32.72 2.32
4051 4487 4.640771 TGCTTCTCAGGGTTAGAATTGT 57.359 40.909 0.00 0.00 32.72 2.71
4060 4496 4.018779 CAGGGTTAGAATTGTCAAGGGGTA 60.019 45.833 0.00 0.00 0.00 3.69
4061 4497 4.018688 AGGGTTAGAATTGTCAAGGGGTAC 60.019 45.833 0.00 0.00 0.00 3.34
4062 4498 4.263594 GGGTTAGAATTGTCAAGGGGTACA 60.264 45.833 0.00 0.00 0.00 2.90
4063 4499 4.941873 GGTTAGAATTGTCAAGGGGTACAG 59.058 45.833 0.00 0.00 0.00 2.74
4064 4500 3.721087 AGAATTGTCAAGGGGTACAGG 57.279 47.619 0.00 0.00 0.00 4.00
4065 4501 2.308866 AGAATTGTCAAGGGGTACAGGG 59.691 50.000 0.00 0.00 0.00 4.45
4066 4502 2.053747 ATTGTCAAGGGGTACAGGGA 57.946 50.000 0.00 0.00 0.00 4.20
4067 4503 2.053747 TTGTCAAGGGGTACAGGGAT 57.946 50.000 0.00 0.00 0.00 3.85
4068 4504 2.953093 TGTCAAGGGGTACAGGGATA 57.047 50.000 0.00 0.00 0.00 2.59
4069 4505 3.431411 TGTCAAGGGGTACAGGGATAT 57.569 47.619 0.00 0.00 0.00 1.63
4071 4507 4.116113 TGTCAAGGGGTACAGGGATATTT 58.884 43.478 0.00 0.00 0.00 1.40
4072 4508 5.290335 TGTCAAGGGGTACAGGGATATTTA 58.710 41.667 0.00 0.00 0.00 1.40
4073 4509 5.914716 TGTCAAGGGGTACAGGGATATTTAT 59.085 40.000 0.00 0.00 0.00 1.40
4074 4510 7.083628 TGTCAAGGGGTACAGGGATATTTATA 58.916 38.462 0.00 0.00 0.00 0.98
4075 4511 7.016858 TGTCAAGGGGTACAGGGATATTTATAC 59.983 40.741 0.00 0.00 0.00 1.47
4076 4512 7.237055 GTCAAGGGGTACAGGGATATTTATACT 59.763 40.741 0.00 0.00 0.00 2.12
4078 4514 8.759782 CAAGGGGTACAGGGATATTTATACTAG 58.240 40.741 0.00 0.00 0.00 2.57
4080 4516 6.901857 GGGGTACAGGGATATTTATACTAGCT 59.098 42.308 0.00 0.00 0.00 3.32
4081 4517 8.063770 GGGGTACAGGGATATTTATACTAGCTA 58.936 40.741 0.00 0.00 0.00 3.32
4082 4518 9.134055 GGGTACAGGGATATTTATACTAGCTAG 57.866 40.741 19.44 19.44 0.00 3.42
4083 4519 9.917887 GGTACAGGGATATTTATACTAGCTAGA 57.082 37.037 27.45 11.19 0.00 2.43
4086 4522 9.824216 ACAGGGATATTTATACTAGCTAGAACA 57.176 33.333 27.45 11.78 0.00 3.18
4113 4597 8.730948 ACTAGTACTAATCCTATTGGGTGACTA 58.269 37.037 3.76 0.00 36.25 2.59
4115 4599 8.423906 AGTACTAATCCTATTGGGTGACTATG 57.576 38.462 0.00 0.00 36.25 2.23
4116 4600 6.115448 ACTAATCCTATTGGGTGACTATGC 57.885 41.667 0.00 0.00 36.25 3.14
4117 4601 5.846714 ACTAATCCTATTGGGTGACTATGCT 59.153 40.000 0.00 0.00 36.25 3.79
4119 4603 3.653164 TCCTATTGGGTGACTATGCTGA 58.347 45.455 0.00 0.00 36.25 4.26
4121 4605 4.473196 TCCTATTGGGTGACTATGCTGAAA 59.527 41.667 0.00 0.00 36.25 2.69
4126 4610 3.055385 TGGGTGACTATGCTGAAACCTAC 60.055 47.826 0.00 0.00 0.00 3.18
4127 4611 3.055385 GGGTGACTATGCTGAAACCTACA 60.055 47.826 0.00 0.00 0.00 2.74
4135 4619 1.539496 GCTGAAACCTACACGGACACA 60.539 52.381 0.00 0.00 36.31 3.72
4137 4621 3.615592 GCTGAAACCTACACGGACACATA 60.616 47.826 0.00 0.00 36.31 2.29
4139 4623 3.575256 TGAAACCTACACGGACACATACT 59.425 43.478 0.00 0.00 36.31 2.12
4140 4624 3.587797 AACCTACACGGACACATACTG 57.412 47.619 0.00 0.00 36.31 2.74
4141 4625 1.203994 ACCTACACGGACACATACTGC 59.796 52.381 0.00 0.00 36.31 4.40
4142 4626 1.203758 CCTACACGGACACATACTGCA 59.796 52.381 0.00 0.00 33.16 4.41
4143 4627 2.259618 CTACACGGACACATACTGCAC 58.740 52.381 0.00 0.00 0.00 4.57
4145 4629 1.080093 ACGGACACATACTGCACCG 60.080 57.895 6.58 6.58 44.06 4.94
4146 4630 1.080093 CGGACACATACTGCACCGT 60.080 57.895 0.00 0.00 37.94 4.83
4147 4631 0.171679 CGGACACATACTGCACCGTA 59.828 55.000 0.00 0.00 37.94 4.02
4148 4632 1.636988 GGACACATACTGCACCGTAC 58.363 55.000 0.00 0.00 0.00 3.67
4150 4634 2.259618 GACACATACTGCACCGTACAG 58.740 52.381 0.00 0.00 41.08 2.74
4151 4635 1.890489 ACACATACTGCACCGTACAGA 59.110 47.619 5.73 0.00 38.55 3.41
4153 4637 1.135083 ACATACTGCACCGTACAGAGC 60.135 52.381 5.73 0.00 38.55 4.09
4154 4638 0.460311 ATACTGCACCGTACAGAGCC 59.540 55.000 5.73 0.00 38.55 4.70
4155 4639 1.601419 TACTGCACCGTACAGAGCCC 61.601 60.000 5.73 0.00 38.55 5.19
4157 4641 2.434359 GCACCGTACAGAGCCCAC 60.434 66.667 0.00 0.00 0.00 4.61
4158 4642 2.126071 CACCGTACAGAGCCCACG 60.126 66.667 0.00 0.00 35.50 4.94
4159 4643 2.599578 ACCGTACAGAGCCCACGT 60.600 61.111 0.00 0.00 33.93 4.49
4160 4644 2.126071 CCGTACAGAGCCCACGTG 60.126 66.667 9.08 9.08 33.93 4.49
4161 4645 2.649034 CGTACAGAGCCCACGTGT 59.351 61.111 15.65 0.00 0.00 4.49
4162 4646 1.733041 CGTACAGAGCCCACGTGTG 60.733 63.158 15.65 3.72 0.00 3.82
4163 4647 1.366366 GTACAGAGCCCACGTGTGT 59.634 57.895 15.65 13.89 0.00 3.72
4164 4648 0.599558 GTACAGAGCCCACGTGTGTA 59.400 55.000 15.65 12.85 0.00 2.90
4165 4649 0.599558 TACAGAGCCCACGTGTGTAC 59.400 55.000 15.65 3.49 0.00 2.90
4169 4653 2.138656 GAGCCCACGTGTGTACTCGT 62.139 60.000 15.65 6.33 45.34 4.18
4238 6344 4.271696 ACAGAGATGACAATCGTTTCCA 57.728 40.909 0.00 0.00 37.92 3.53
4241 6347 3.624861 AGAGATGACAATCGTTTCCATGC 59.375 43.478 0.00 0.00 37.92 4.06
4277 6383 7.506114 TGAAACAAATATTATAGAGTCCCGCT 58.494 34.615 0.00 0.00 0.00 5.52
4279 6385 7.964604 AACAAATATTATAGAGTCCCGCTTC 57.035 36.000 0.00 0.00 0.00 3.86
4282 6388 2.062971 TTATAGAGTCCCGCTTCGGT 57.937 50.000 4.47 0.00 46.80 4.69
4283 6389 2.936919 TATAGAGTCCCGCTTCGGTA 57.063 50.000 4.47 0.00 46.80 4.02
4284 6390 1.316651 ATAGAGTCCCGCTTCGGTAC 58.683 55.000 4.47 0.00 46.80 3.34
4285 6391 0.035152 TAGAGTCCCGCTTCGGTACA 60.035 55.000 3.93 0.00 46.80 2.90
4287 6393 0.735287 GAGTCCCGCTTCGGTACAAC 60.735 60.000 3.93 0.00 46.80 3.32
4288 6394 1.739196 GTCCCGCTTCGGTACAACC 60.739 63.158 4.47 0.00 46.80 3.77
4289 6395 2.435410 CCCGCTTCGGTACAACCC 60.435 66.667 4.47 0.00 46.80 4.11
4290 6396 2.435410 CCGCTTCGGTACAACCCC 60.435 66.667 0.00 0.00 42.73 4.95
4292 6398 3.122971 GCTTCGGTACAACCCCGC 61.123 66.667 0.00 0.00 45.09 6.13
4293 6399 2.435410 CTTCGGTACAACCCCGCC 60.435 66.667 0.00 0.00 45.09 6.13
4298 6404 4.105553 GTACAACCCCGCCCCTCC 62.106 72.222 0.00 0.00 0.00 4.30
4299 6405 4.342086 TACAACCCCGCCCCTCCT 62.342 66.667 0.00 0.00 0.00 3.69
4300 6406 2.945904 TACAACCCCGCCCCTCCTA 61.946 63.158 0.00 0.00 0.00 2.94
4301 6407 2.474133 TACAACCCCGCCCCTCCTAA 62.474 60.000 0.00 0.00 0.00 2.69
4302 6408 3.013327 AACCCCGCCCCTCCTAAC 61.013 66.667 0.00 0.00 0.00 2.34
4303 6409 3.876255 AACCCCGCCCCTCCTAACA 62.876 63.158 0.00 0.00 0.00 2.41
4306 6412 3.387947 CCGCCCCTCCTAACACGT 61.388 66.667 0.00 0.00 0.00 4.49
4307 6413 2.053865 CCGCCCCTCCTAACACGTA 61.054 63.158 0.00 0.00 0.00 3.57
4308 6414 1.397390 CCGCCCCTCCTAACACGTAT 61.397 60.000 0.00 0.00 0.00 3.06
4309 6415 1.321474 CGCCCCTCCTAACACGTATA 58.679 55.000 0.00 0.00 0.00 1.47
4310 6416 1.891150 CGCCCCTCCTAACACGTATAT 59.109 52.381 0.00 0.00 0.00 0.86
4311 6417 2.298163 CGCCCCTCCTAACACGTATATT 59.702 50.000 0.00 0.00 0.00 1.28
4312 6418 3.660865 GCCCCTCCTAACACGTATATTG 58.339 50.000 0.00 0.00 0.00 1.90
4313 6419 3.556423 GCCCCTCCTAACACGTATATTGG 60.556 52.174 0.00 0.00 0.00 3.16
4314 6420 3.007614 CCCCTCCTAACACGTATATTGGG 59.992 52.174 0.00 0.00 0.00 4.12
4315 6421 3.644738 CCCTCCTAACACGTATATTGGGT 59.355 47.826 8.13 0.00 0.00 4.51
4316 6422 4.834496 CCCTCCTAACACGTATATTGGGTA 59.166 45.833 8.13 0.00 0.00 3.69
4318 6424 5.537674 CCTCCTAACACGTATATTGGGTAGT 59.462 44.000 8.13 0.00 0.00 2.73
4319 6425 6.716628 CCTCCTAACACGTATATTGGGTAGTA 59.283 42.308 8.13 0.00 0.00 1.82
4320 6426 7.395489 CCTCCTAACACGTATATTGGGTAGTAT 59.605 40.741 8.13 0.00 0.00 2.12
4321 6427 8.114331 TCCTAACACGTATATTGGGTAGTATG 57.886 38.462 8.13 0.00 0.00 2.39
4322 6428 7.177216 TCCTAACACGTATATTGGGTAGTATGG 59.823 40.741 8.13 0.00 0.00 2.74
4323 6429 6.736110 AACACGTATATTGGGTAGTATGGT 57.264 37.500 0.00 0.00 0.00 3.55
4325 6431 7.838079 ACACGTATATTGGGTAGTATGGTTA 57.162 36.000 0.00 0.00 0.00 2.85
4326 6432 8.426569 ACACGTATATTGGGTAGTATGGTTAT 57.573 34.615 0.00 0.00 0.00 1.89
4327 6433 8.873144 ACACGTATATTGGGTAGTATGGTTATT 58.127 33.333 0.00 0.00 0.00 1.40
4329 6435 9.933723 ACGTATATTGGGTAGTATGGTTATTTC 57.066 33.333 0.00 0.00 0.00 2.17
4330 6436 9.932207 CGTATATTGGGTAGTATGGTTATTTCA 57.068 33.333 0.00 0.00 0.00 2.69
4334 6440 7.873719 TTGGGTAGTATGGTTATTTCACATG 57.126 36.000 0.00 0.00 0.00 3.21
4335 6441 6.361433 TGGGTAGTATGGTTATTTCACATGG 58.639 40.000 0.00 0.00 0.00 3.66
4336 6442 6.158871 TGGGTAGTATGGTTATTTCACATGGA 59.841 38.462 0.00 0.00 0.00 3.41
4337 6443 6.485648 GGGTAGTATGGTTATTTCACATGGAC 59.514 42.308 0.00 0.00 0.00 4.02
4339 6445 5.741011 AGTATGGTTATTTCACATGGACGT 58.259 37.500 0.00 0.00 0.00 4.34
4340 6446 6.880484 AGTATGGTTATTTCACATGGACGTA 58.120 36.000 0.00 0.00 0.00 3.57
4342 6448 8.644216 AGTATGGTTATTTCACATGGACGTATA 58.356 33.333 0.00 0.00 0.00 1.47
4343 6449 7.962964 ATGGTTATTTCACATGGACGTATAG 57.037 36.000 0.00 0.00 0.00 1.31
4344 6450 7.114866 TGGTTATTTCACATGGACGTATAGA 57.885 36.000 0.00 0.00 0.00 1.98
4345 6451 7.557724 TGGTTATTTCACATGGACGTATAGAA 58.442 34.615 0.00 0.00 0.00 2.10
4346 6452 8.208224 TGGTTATTTCACATGGACGTATAGAAT 58.792 33.333 0.00 0.00 0.00 2.40
4347 6453 9.701098 GGTTATTTCACATGGACGTATAGAATA 57.299 33.333 0.00 0.00 0.00 1.75
4349 6455 9.701098 TTATTTCACATGGACGTATAGAATACC 57.299 33.333 0.00 0.00 0.00 2.73
4350 6456 5.717078 TCACATGGACGTATAGAATACCC 57.283 43.478 0.00 0.00 0.00 3.69
4351 6457 5.141910 TCACATGGACGTATAGAATACCCA 58.858 41.667 0.00 0.00 0.00 4.51
4352 6458 5.010314 TCACATGGACGTATAGAATACCCAC 59.990 44.000 0.00 0.00 0.00 4.61
4353 6459 4.282703 ACATGGACGTATAGAATACCCACC 59.717 45.833 0.00 0.00 0.00 4.61
4354 6460 3.233507 TGGACGTATAGAATACCCACCC 58.766 50.000 0.00 0.00 0.00 4.61
4355 6461 2.229784 GGACGTATAGAATACCCACCCG 59.770 54.545 0.00 0.00 0.00 5.28
4357 6463 1.067354 CGTATAGAATACCCACCCGCC 60.067 57.143 0.00 0.00 0.00 6.13
4358 6464 2.254508 GTATAGAATACCCACCCGCCT 58.745 52.381 0.00 0.00 0.00 5.52
4360 6466 1.692173 TAGAATACCCACCCGCCTGC 61.692 60.000 0.00 0.00 0.00 4.85
4361 6467 4.483243 AATACCCACCCGCCTGCG 62.483 66.667 4.20 4.20 39.44 5.18
4369 6475 4.935495 CCCGCCTGCGTATGCCAT 62.935 66.667 10.94 0.00 41.78 4.40
4370 6476 2.030412 CCGCCTGCGTATGCCATA 59.970 61.111 10.94 0.00 41.78 2.74
4372 6478 2.317609 CGCCTGCGTATGCCATACC 61.318 63.158 9.20 3.30 41.78 2.73
4373 6479 2.317609 GCCTGCGTATGCCATACCG 61.318 63.158 9.20 5.92 41.78 4.02
4374 6480 1.667830 CCTGCGTATGCCATACCGG 60.668 63.158 9.20 0.00 41.78 5.28
4375 6481 1.069090 CTGCGTATGCCATACCGGT 59.931 57.895 13.98 13.98 41.78 5.28
4377 6483 1.068417 GCGTATGCCATACCGGTCA 59.932 57.895 12.40 2.31 36.97 4.02
4379 6485 0.599204 CGTATGCCATACCGGTCACC 60.599 60.000 12.40 0.00 36.97 4.02
4380 6486 0.250166 GTATGCCATACCGGTCACCC 60.250 60.000 12.40 0.00 36.97 4.61
4391 6497 1.514553 GGTCACCCGTACACTAGCC 59.485 63.158 0.00 0.00 0.00 3.93
4392 6498 1.514553 GTCACCCGTACACTAGCCC 59.485 63.158 0.00 0.00 0.00 5.19
4393 6499 1.683365 TCACCCGTACACTAGCCCC 60.683 63.158 0.00 0.00 0.00 5.80
4394 6500 2.364710 ACCCGTACACTAGCCCCC 60.365 66.667 0.00 0.00 0.00 5.40
4395 6501 3.534056 CCCGTACACTAGCCCCCG 61.534 72.222 0.00 0.00 0.00 5.73
4396 6502 2.757099 CCGTACACTAGCCCCCGT 60.757 66.667 0.00 0.00 0.00 5.28
4397 6503 1.453745 CCGTACACTAGCCCCCGTA 60.454 63.158 0.00 0.00 0.00 4.02
4398 6504 1.728490 CCGTACACTAGCCCCCGTAC 61.728 65.000 0.00 0.00 0.00 3.67
4400 6506 1.406903 GTACACTAGCCCCCGTACAT 58.593 55.000 0.00 0.00 35.41 2.29
4402 6508 1.335132 ACACTAGCCCCCGTACATGG 61.335 60.000 0.00 0.00 0.00 3.66
4404 6510 1.047034 ACTAGCCCCCGTACATGGTC 61.047 60.000 0.00 0.00 0.00 4.02
4405 6511 2.083835 CTAGCCCCCGTACATGGTCG 62.084 65.000 0.00 0.93 0.00 4.79
4408 6514 4.884257 CCCCGTACATGGTCGCCG 62.884 72.222 0.00 0.00 0.00 6.46
4410 6516 2.773745 CCCGTACATGGTCGCCGTA 61.774 63.158 0.00 0.00 0.00 4.02
4411 6517 1.361271 CCGTACATGGTCGCCGTAT 59.639 57.895 0.00 0.00 0.00 3.06
4414 6520 1.068417 TACATGGTCGCCGTATGCC 59.932 57.895 0.00 0.00 36.24 4.40
4415 6521 2.372040 TACATGGTCGCCGTATGCCC 62.372 60.000 0.00 0.00 36.24 5.36
4416 6522 3.475494 ATGGTCGCCGTATGCCCA 61.475 61.111 0.00 0.00 36.00 5.36
4417 6523 3.750373 ATGGTCGCCGTATGCCCAC 62.750 63.158 0.00 0.00 34.62 4.61
4423 6529 4.090588 CCGTATGCCCACCCGTGT 62.091 66.667 0.00 0.00 0.00 4.49
4424 6530 2.046700 CGTATGCCCACCCGTGTT 60.047 61.111 0.00 0.00 0.00 3.32
4425 6531 2.395360 CGTATGCCCACCCGTGTTG 61.395 63.158 0.00 0.00 0.00 3.33
4426 6532 2.360600 TATGCCCACCCGTGTTGC 60.361 61.111 0.00 0.00 0.00 4.17
4430 6536 2.428187 CCCACCCGTGTTGCTGTA 59.572 61.111 0.00 0.00 0.00 2.74
4432 6538 1.227704 CCACCCGTGTTGCTGTACA 60.228 57.895 0.00 0.00 0.00 2.90
4433 6539 1.503818 CCACCCGTGTTGCTGTACAC 61.504 60.000 0.00 7.10 43.86 2.90
4434 6540 0.531974 CACCCGTGTTGCTGTACACT 60.532 55.000 12.97 0.00 44.85 3.55
4435 6541 1.042229 ACCCGTGTTGCTGTACACTA 58.958 50.000 12.97 0.00 44.85 2.74
4436 6542 1.000506 ACCCGTGTTGCTGTACACTAG 59.999 52.381 12.97 0.00 44.85 2.57
4437 6543 1.068474 CCGTGTTGCTGTACACTAGC 58.932 55.000 12.97 0.00 44.85 3.42
4438 6544 0.708370 CGTGTTGCTGTACACTAGCG 59.292 55.000 12.97 0.00 44.85 4.26
4439 6545 1.779569 GTGTTGCTGTACACTAGCGT 58.220 50.000 0.00 0.00 43.92 5.07
4441 6547 0.982673 GTTGCTGTACACTAGCGTCG 59.017 55.000 0.00 0.00 44.01 5.12
4442 6548 0.594602 TTGCTGTACACTAGCGTCGT 59.405 50.000 0.00 0.00 44.01 4.34
4444 6550 1.805943 TGCTGTACACTAGCGTCGTTA 59.194 47.619 0.00 0.00 44.01 3.18
4447 6553 3.669023 GCTGTACACTAGCGTCGTTACTT 60.669 47.826 0.00 0.00 0.00 2.24
4450 6556 2.658285 ACACTAGCGTCGTTACTTGTG 58.342 47.619 9.90 9.90 42.75 3.33
4451 6557 2.291465 ACACTAGCGTCGTTACTTGTGA 59.709 45.455 15.58 0.00 40.58 3.58
4452 6558 3.243168 ACACTAGCGTCGTTACTTGTGAA 60.243 43.478 15.58 0.00 40.58 3.18
4454 6560 4.207635 CACTAGCGTCGTTACTTGTGAAAA 59.792 41.667 6.97 0.00 40.58 2.29
4455 6561 4.805192 ACTAGCGTCGTTACTTGTGAAAAA 59.195 37.500 0.00 0.00 0.00 1.94
4474 6580 1.620822 AAAAAGCCCGAGCATGACTT 58.379 45.000 0.00 0.00 43.56 3.01
4476 6582 0.250901 AAAGCCCGAGCATGACTTGT 60.251 50.000 0.00 0.00 43.56 3.16
4477 6583 0.250901 AAGCCCGAGCATGACTTGTT 60.251 50.000 0.00 0.00 43.56 2.83
4478 6584 0.957395 AGCCCGAGCATGACTTGTTG 60.957 55.000 0.00 0.00 43.56 3.33
4479 6585 0.955428 GCCCGAGCATGACTTGTTGA 60.955 55.000 0.00 0.00 39.53 3.18
4480 6586 0.798776 CCCGAGCATGACTTGTTGAC 59.201 55.000 0.00 0.00 0.00 3.18
4481 6587 0.439985 CCGAGCATGACTTGTTGACG 59.560 55.000 0.00 0.00 0.00 4.35
4483 6589 0.166814 GAGCATGACTTGTTGACGCC 59.833 55.000 0.00 0.00 0.00 5.68
4484 6590 0.250467 AGCATGACTTGTTGACGCCT 60.250 50.000 0.00 0.00 0.00 5.52
4485 6591 0.166814 GCATGACTTGTTGACGCCTC 59.833 55.000 0.00 0.00 0.00 4.70
4486 6592 1.511850 CATGACTTGTTGACGCCTCA 58.488 50.000 0.00 0.00 0.00 3.86
4487 6593 2.079158 CATGACTTGTTGACGCCTCAT 58.921 47.619 0.00 0.00 0.00 2.90
4488 6594 1.511850 TGACTTGTTGACGCCTCATG 58.488 50.000 0.00 0.00 0.00 3.07
4491 6597 0.439985 CTTGTTGACGCCTCATGTCG 59.560 55.000 0.00 0.00 39.22 4.35
4492 6598 0.032815 TTGTTGACGCCTCATGTCGA 59.967 50.000 10.61 0.00 39.22 4.20
4493 6599 0.032815 TGTTGACGCCTCATGTCGAA 59.967 50.000 10.61 0.00 39.22 3.71
4494 6600 1.144969 GTTGACGCCTCATGTCGAAA 58.855 50.000 10.61 0.00 39.22 3.46
4495 6601 1.136336 GTTGACGCCTCATGTCGAAAC 60.136 52.381 10.61 10.08 39.22 2.78
4496 6602 0.669318 TGACGCCTCATGTCGAAACC 60.669 55.000 10.61 0.00 39.22 3.27
4498 6604 1.375396 CGCCTCATGTCGAAACCCA 60.375 57.895 0.00 0.00 0.00 4.51
4499 6605 0.953471 CGCCTCATGTCGAAACCCAA 60.953 55.000 0.00 0.00 0.00 4.12
4501 6607 1.882352 GCCTCATGTCGAAACCCAAGT 60.882 52.381 0.00 0.00 0.00 3.16
4502 6608 1.806542 CCTCATGTCGAAACCCAAGTG 59.193 52.381 0.00 0.00 0.00 3.16
4503 6609 1.806542 CTCATGTCGAAACCCAAGTGG 59.193 52.381 0.00 0.00 41.37 4.00
4504 6610 0.240945 CATGTCGAAACCCAAGTGGC 59.759 55.000 0.00 0.00 37.83 5.01
4505 6611 1.234615 ATGTCGAAACCCAAGTGGCG 61.235 55.000 0.00 0.00 37.83 5.69
4506 6612 2.281208 TCGAAACCCAAGTGGCGG 60.281 61.111 0.00 0.00 37.83 6.13
4507 6613 2.593436 CGAAACCCAAGTGGCGGT 60.593 61.111 0.00 0.00 37.83 5.68
4508 6614 1.301874 CGAAACCCAAGTGGCGGTA 60.302 57.895 0.00 0.00 37.83 4.02
4510 6616 1.583495 GAAACCCAAGTGGCGGTAGC 61.583 60.000 0.00 0.00 44.18 3.58
4511 6617 3.894547 AACCCAAGTGGCGGTAGCG 62.895 63.158 10.57 10.57 46.35 4.26
4512 6618 4.388499 CCCAAGTGGCGGTAGCGT 62.388 66.667 16.63 0.00 46.35 5.07
4513 6619 2.358247 CCAAGTGGCGGTAGCGTT 60.358 61.111 16.63 0.00 46.35 4.84
4514 6620 2.388232 CCAAGTGGCGGTAGCGTTC 61.388 63.158 16.63 9.29 46.35 3.95
4515 6621 2.047560 AAGTGGCGGTAGCGTTCC 60.048 61.111 16.63 10.01 46.35 3.62
4516 6622 2.874664 AAGTGGCGGTAGCGTTCCA 61.875 57.895 16.63 12.64 46.35 3.53
4517 6623 2.781595 AAGTGGCGGTAGCGTTCCAG 62.782 60.000 16.63 0.00 46.35 3.86
4518 6624 3.307906 TGGCGGTAGCGTTCCAGT 61.308 61.111 16.63 0.00 46.35 4.00
4519 6625 2.508663 GGCGGTAGCGTTCCAGTC 60.509 66.667 16.63 0.00 46.35 3.51
4520 6626 2.879462 GCGGTAGCGTTCCAGTCG 60.879 66.667 16.63 0.00 0.00 4.18
4528 6634 2.785258 GTTCCAGTCGCCGCATTC 59.215 61.111 0.00 0.00 0.00 2.67
4533 7816 2.125106 AGTCGCCGCATTCCTTCC 60.125 61.111 0.00 0.00 0.00 3.46
4539 7822 3.204827 CGCATTCCTTCCCGGCAG 61.205 66.667 0.00 0.00 0.00 4.85
4540 7823 2.044946 GCATTCCTTCCCGGCAGT 60.045 61.111 0.00 0.00 0.00 4.40
4545 7828 4.796231 CCTTCCCGGCAGTCGTCG 62.796 72.222 0.00 0.00 40.89 5.12
4547 7830 3.966026 CTTCCCGGCAGTCGTCGTC 62.966 68.421 0.00 0.00 39.06 4.20
4555 7838 2.114625 AGTCGTCGTCACCCTCCA 59.885 61.111 0.00 0.00 0.00 3.86
4556 7839 2.257676 GTCGTCGTCACCCTCCAC 59.742 66.667 0.00 0.00 0.00 4.02
4557 7840 3.359523 TCGTCGTCACCCTCCACG 61.360 66.667 0.00 0.00 37.36 4.94
4558 7841 3.667282 CGTCGTCACCCTCCACGT 61.667 66.667 0.00 0.00 37.30 4.49
4559 7842 2.049433 GTCGTCACCCTCCACGTG 60.049 66.667 9.08 9.08 37.30 4.49
4560 7843 3.299977 TCGTCACCCTCCACGTGG 61.300 66.667 29.26 29.26 37.30 4.94
4562 7845 4.699522 GTCACCCTCCACGTGGCC 62.700 72.222 30.25 0.00 34.44 5.36
4565 7848 4.326227 ACCCTCCACGTGGCCCTA 62.326 66.667 30.25 11.81 34.44 3.53
4566 7849 3.470888 CCCTCCACGTGGCCCTAG 61.471 72.222 30.25 20.71 34.44 3.02
4569 7852 3.064987 CTCCACGTGGCCCTAGTCG 62.065 68.421 30.25 2.78 34.44 4.18
4570 7853 4.814294 CCACGTGGCCCTAGTCGC 62.814 72.222 24.02 0.00 0.00 5.19
4578 7861 4.090588 CCCTAGTCGCCGCCCAAA 62.091 66.667 0.00 0.00 0.00 3.28
4579 7862 2.818274 CCTAGTCGCCGCCCAAAC 60.818 66.667 0.00 0.00 0.00 2.93
4580 7863 2.047655 CTAGTCGCCGCCCAAACA 60.048 61.111 0.00 0.00 0.00 2.83
4582 7865 1.908066 CTAGTCGCCGCCCAAACAAC 61.908 60.000 0.00 0.00 0.00 3.32
4585 7868 4.973360 CGCCGCCCAAACAACACG 62.973 66.667 0.00 0.00 0.00 4.49
4587 7870 4.639171 CCGCCCAAACAACACGCC 62.639 66.667 0.00 0.00 0.00 5.68
4588 7871 4.973360 CGCCCAAACAACACGCCG 62.973 66.667 0.00 0.00 0.00 6.46
4626 7909 3.382083 CCCACAGGCTAAACCCTATTT 57.618 47.619 0.00 0.00 40.58 1.40
4627 7910 3.023832 CCCACAGGCTAAACCCTATTTG 58.976 50.000 0.00 0.00 40.58 2.32
4628 7911 3.563479 CCCACAGGCTAAACCCTATTTGT 60.563 47.826 0.00 0.00 40.58 2.83
4629 7912 3.443681 CCACAGGCTAAACCCTATTTGTG 59.556 47.826 0.00 0.00 38.64 3.33
4630 7913 4.331968 CACAGGCTAAACCCTATTTGTGA 58.668 43.478 0.00 0.00 40.40 3.58
4631 7914 4.949856 CACAGGCTAAACCCTATTTGTGAT 59.050 41.667 0.00 0.00 40.40 3.06
4632 7915 5.066505 CACAGGCTAAACCCTATTTGTGATC 59.933 44.000 0.00 0.00 40.40 2.92
4633 7916 4.273480 CAGGCTAAACCCTATTTGTGATCG 59.727 45.833 0.00 0.00 40.58 3.69
4634 7917 4.080526 AGGCTAAACCCTATTTGTGATCGT 60.081 41.667 0.00 0.00 40.58 3.73
4635 7918 4.272748 GGCTAAACCCTATTTGTGATCGTC 59.727 45.833 0.00 0.00 0.00 4.20
4636 7919 4.025979 GCTAAACCCTATTTGTGATCGTCG 60.026 45.833 0.00 0.00 0.00 5.12
4638 7921 1.480954 ACCCTATTTGTGATCGTCGCT 59.519 47.619 0.00 0.00 0.00 4.93
4640 7923 1.258982 CCTATTTGTGATCGTCGCTGC 59.741 52.381 0.00 0.00 0.00 5.25
4641 7924 1.926510 CTATTTGTGATCGTCGCTGCA 59.073 47.619 0.00 0.00 0.00 4.41
4643 7926 1.900585 TTTGTGATCGTCGCTGCAGC 61.901 55.000 29.12 29.12 37.78 5.25
4645 7928 4.067913 TGATCGTCGCTGCAGCCA 62.068 61.111 32.07 18.81 37.91 4.75
4646 7929 3.558411 GATCGTCGCTGCAGCCAC 61.558 66.667 32.07 28.21 37.91 5.01
4652 7935 2.819595 CGCTGCAGCCACCGTATT 60.820 61.111 32.07 0.00 37.91 1.89
4653 7936 2.813179 CGCTGCAGCCACCGTATTC 61.813 63.158 32.07 1.67 37.91 1.75
4655 7938 1.221840 CTGCAGCCACCGTATTCCT 59.778 57.895 0.00 0.00 0.00 3.36
4656 7939 0.392998 CTGCAGCCACCGTATTCCTT 60.393 55.000 0.00 0.00 0.00 3.36
4657 7940 0.676466 TGCAGCCACCGTATTCCTTG 60.676 55.000 0.00 0.00 0.00 3.61
4659 7942 0.035439 CAGCCACCGTATTCCTTGGT 60.035 55.000 0.00 0.00 36.10 3.67
4660 7943 0.252197 AGCCACCGTATTCCTTGGTC 59.748 55.000 0.00 0.00 32.48 4.02
4661 7944 1.087771 GCCACCGTATTCCTTGGTCG 61.088 60.000 0.00 0.00 32.48 4.79
4662 7945 0.248289 CCACCGTATTCCTTGGTCGT 59.752 55.000 0.00 0.00 32.48 4.34
4663 7946 1.636988 CACCGTATTCCTTGGTCGTC 58.363 55.000 0.00 0.00 32.48 4.20
4665 7948 1.143969 CCGTATTCCTTGGTCGTCGC 61.144 60.000 0.00 0.00 0.00 5.19
4666 7949 1.143969 CGTATTCCTTGGTCGTCGCC 61.144 60.000 0.00 0.00 0.00 5.54
4667 7950 0.808847 GTATTCCTTGGTCGTCGCCC 60.809 60.000 3.72 0.00 0.00 6.13
4668 7951 2.287457 TATTCCTTGGTCGTCGCCCG 62.287 60.000 3.72 0.00 38.13 6.13
4671 7954 4.143333 CTTGGTCGTCGCCCGGAT 62.143 66.667 0.73 0.00 37.11 4.18
4672 7955 4.137872 TTGGTCGTCGCCCGGATC 62.138 66.667 0.73 0.00 37.11 3.36
4690 7973 3.195698 GCCGTCTGCCCGTGAATC 61.196 66.667 0.00 0.00 0.00 2.52
4692 7975 1.079127 CCGTCTGCCCGTGAATCTT 60.079 57.895 0.00 0.00 0.00 2.40
4693 7976 1.084370 CCGTCTGCCCGTGAATCTTC 61.084 60.000 0.00 0.00 0.00 2.87
4694 7977 0.389817 CGTCTGCCCGTGAATCTTCA 60.390 55.000 0.00 0.00 34.20 3.02
4695 7978 1.740380 CGTCTGCCCGTGAATCTTCAT 60.740 52.381 0.00 0.00 39.73 2.57
4697 7980 0.933097 CTGCCCGTGAATCTTCATCG 59.067 55.000 0.00 2.71 39.73 3.84
4698 7981 1.089481 TGCCCGTGAATCTTCATCGC 61.089 55.000 0.00 0.00 39.73 4.58
4699 7982 1.776034 GCCCGTGAATCTTCATCGCC 61.776 60.000 0.00 0.00 39.73 5.54
4700 7983 1.490693 CCCGTGAATCTTCATCGCCG 61.491 60.000 0.00 0.00 39.73 6.46
4701 7984 0.806102 CCGTGAATCTTCATCGCCGT 60.806 55.000 0.00 0.00 39.73 5.68
4702 7985 0.298707 CGTGAATCTTCATCGCCGTG 59.701 55.000 0.00 0.00 39.73 4.94
4704 7987 0.461870 TGAATCTTCATCGCCGTGGG 60.462 55.000 0.00 0.00 31.01 4.61
4705 7988 0.462047 GAATCTTCATCGCCGTGGGT 60.462 55.000 0.00 0.00 0.00 4.51
4706 7989 0.744414 AATCTTCATCGCCGTGGGTG 60.744 55.000 0.00 0.00 33.99 4.61
4707 7990 3.499737 CTTCATCGCCGTGGGTGC 61.500 66.667 0.00 0.00 32.51 5.01
4708 7991 4.321966 TTCATCGCCGTGGGTGCA 62.322 61.111 0.00 0.00 32.51 4.57
4709 7992 3.620419 TTCATCGCCGTGGGTGCAT 62.620 57.895 0.00 0.00 32.51 3.96
4711 7994 2.824041 ATCGCCGTGGGTGCATTC 60.824 61.111 0.00 0.00 32.51 2.67
4712 7995 3.620419 ATCGCCGTGGGTGCATTCA 62.620 57.895 0.00 0.00 32.51 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.283467 CCGATTTCCCACTATCCATGTCTA 59.717 45.833 0.00 0.00 0.00 2.59
78 79 0.888619 GGCTTCTTAGTTGGGTTGGC 59.111 55.000 0.00 0.00 0.00 4.52
108 109 1.006337 GCATTTGCGCCTTCCACAA 60.006 52.632 4.18 0.00 0.00 3.33
196 197 2.243478 TGATTTACCAAGCAGCCCCATA 59.757 45.455 0.00 0.00 0.00 2.74
247 248 5.063880 GGCCTTGATTTATAGGAACGATGT 58.936 41.667 0.00 0.00 33.13 3.06
277 278 0.550914 AGTGTTTGGCTCACCTCCAA 59.449 50.000 0.00 0.00 41.47 3.53
356 357 3.444737 GCTAGCTAGCTACCGGCA 58.555 61.111 33.71 1.02 45.62 5.69
404 405 3.276857 TCTTCTTCCGTGCGTATACTCT 58.723 45.455 0.56 0.00 0.00 3.24
413 414 2.457366 TCCTTCTTCTTCTTCCGTGC 57.543 50.000 0.00 0.00 0.00 5.34
446 447 5.624081 CGTGCTGTATGAATTACGTACCTAG 59.376 44.000 0.00 0.00 39.48 3.02
488 489 8.938906 GCATGGATCAGTTTCAAAACAATAAAT 58.061 29.630 8.23 0.00 41.30 1.40
489 490 7.930325 TGCATGGATCAGTTTCAAAACAATAAA 59.070 29.630 8.23 0.00 41.30 1.40
490 491 7.440198 TGCATGGATCAGTTTCAAAACAATAA 58.560 30.769 8.23 0.00 41.30 1.40
491 492 6.990798 TGCATGGATCAGTTTCAAAACAATA 58.009 32.000 8.23 0.00 41.30 1.90
492 493 5.856156 TGCATGGATCAGTTTCAAAACAAT 58.144 33.333 8.23 1.68 41.30 2.71
493 494 5.273674 TGCATGGATCAGTTTCAAAACAA 57.726 34.783 8.23 0.00 41.30 2.83
494 495 4.933505 TGCATGGATCAGTTTCAAAACA 57.066 36.364 8.23 0.00 41.30 2.83
495 496 5.232463 ACATGCATGGATCAGTTTCAAAAC 58.768 37.500 29.41 0.00 39.17 2.43
500 501 6.381481 TCAATACATGCATGGATCAGTTTC 57.619 37.500 29.41 0.00 29.07 2.78
639 640 6.432783 TGACGACATAATCACCTTTTTCCAAT 59.567 34.615 0.00 0.00 0.00 3.16
703 992 0.106708 TCCTTGAACTGAAGCAGCGT 59.893 50.000 0.00 0.00 34.37 5.07
788 1077 0.109342 CCTGCACAAGACACCTTCCT 59.891 55.000 0.00 0.00 0.00 3.36
843 1135 3.832615 ACCAAACCTCGAGTTGTAAGT 57.167 42.857 12.31 0.00 39.19 2.24
851 1143 1.616865 TGTGTCCTACCAAACCTCGAG 59.383 52.381 5.13 5.13 0.00 4.04
896 1188 1.210478 GGGCTAGAGAATGCAGGAACA 59.790 52.381 0.00 0.00 0.00 3.18
1279 1575 1.466851 GGAAAACTGCCTGCCAGCTT 61.467 55.000 0.00 0.00 45.78 3.74
1332 1628 1.202651 CCGTTGAGACCAAGGTCAAGT 60.203 52.381 20.52 0.54 46.76 3.16
1463 1759 5.810587 TCAACTTCGTATAGATTGGAAGCAC 59.189 40.000 0.00 0.00 39.52 4.40
1482 1778 7.973944 GTGAAGTTGTTACCTGAAAAATCAACT 59.026 33.333 0.00 0.00 43.36 3.16
1680 1976 6.439058 TGGAAAGGTTACCTAATGAATTTGGG 59.561 38.462 3.55 2.02 41.60 4.12
1715 2011 6.899089 TGATTTTCTGCCAAGTATATCTCCA 58.101 36.000 0.00 0.00 0.00 3.86
1828 2127 1.482593 GACAGATCCAATCCACTCCGT 59.517 52.381 0.00 0.00 0.00 4.69
2046 2345 7.847711 TGTTGGGATTTTAAAGATCTCCAAA 57.152 32.000 19.69 4.22 36.50 3.28
2109 2408 2.356135 CCAATGTCGGTAGGAAGTTGG 58.644 52.381 0.00 0.00 36.02 3.77
2247 2546 1.559682 GAAGAGGGAATACTGCCACCA 59.440 52.381 0.00 0.00 34.87 4.17
2567 2867 7.023171 ACCATACCAAGTAAAACCATACTGA 57.977 36.000 0.00 0.00 36.28 3.41
2766 3066 7.094634 GCAACCTCAATTTCATCTTCAACTAGA 60.095 37.037 0.00 0.00 0.00 2.43
3049 3350 0.461870 GCTACATCCACCACGATGCA 60.462 55.000 0.00 0.00 42.91 3.96
3093 3394 0.310854 CCGCTGTTCCTTGGTTGTTC 59.689 55.000 0.00 0.00 0.00 3.18
3109 3410 2.476854 GCTTCAGATCACAATGAACCGC 60.477 50.000 0.00 0.00 32.25 5.68
3110 3411 2.096496 GGCTTCAGATCACAATGAACCG 59.904 50.000 0.00 0.00 32.25 4.44
3296 3619 7.324616 CAGAAAAGCTAAAGCAACACAAGATAC 59.675 37.037 4.54 0.00 45.16 2.24
3383 3726 1.268539 GCAGTTGAAACTTGACCACCG 60.269 52.381 0.00 0.00 37.08 4.94
3593 3938 3.949113 AGCGTACACCTTTTTCCTTCAAA 59.051 39.130 0.00 0.00 0.00 2.69
3686 4031 1.003839 TAGCTTGGCAACCACCTCG 60.004 57.895 0.00 0.00 30.78 4.63
3706 4051 7.757097 AACATACGACAGCTTACTTATTCAG 57.243 36.000 0.00 0.00 0.00 3.02
3735 4142 8.213812 GTCATTACACACACAATGCAATAAAAC 58.786 33.333 0.00 0.00 33.14 2.43
3758 4167 0.604073 TCGCCGGAAAGTACATGTCA 59.396 50.000 5.05 0.00 0.00 3.58
3765 4174 2.658422 GGGTGTCGCCGGAAAGTA 59.342 61.111 5.05 0.00 38.44 2.24
3767 4176 4.367023 TCGGGTGTCGCCGGAAAG 62.367 66.667 5.05 0.00 42.63 2.62
3774 4183 4.688419 TTCGTCGTCGGGTGTCGC 62.688 66.667 1.55 0.00 39.05 5.19
3775 4184 2.798262 GTTCGTCGTCGGGTGTCG 60.798 66.667 1.55 0.00 40.90 4.35
3776 4185 0.665369 ATTGTTCGTCGTCGGGTGTC 60.665 55.000 1.55 0.00 37.69 3.67
3777 4186 0.942410 CATTGTTCGTCGTCGGGTGT 60.942 55.000 1.55 0.00 37.69 4.16
3778 4187 0.665068 TCATTGTTCGTCGTCGGGTG 60.665 55.000 1.55 0.00 37.69 4.61
3780 4189 1.670971 CGTCATTGTTCGTCGTCGGG 61.671 60.000 1.55 0.00 37.69 5.14
3793 4202 4.820897 TCATCTAGTGTTGCTTCGTCATT 58.179 39.130 0.00 0.00 0.00 2.57
3808 4217 3.274288 GGCAGGAACCAAGTTCATCTAG 58.726 50.000 9.50 0.00 43.54 2.43
3810 4219 1.272147 GGGCAGGAACCAAGTTCATCT 60.272 52.381 9.50 0.00 43.54 2.90
3863 4272 1.730772 GCTACAGATAGCGCATCTCGG 60.731 57.143 11.47 6.32 44.36 4.63
3875 4284 6.074648 AGAGTAAATCAGGCTAGCTACAGAT 58.925 40.000 15.72 9.88 0.00 2.90
3877 4286 5.782893 AGAGTAAATCAGGCTAGCTACAG 57.217 43.478 15.72 2.37 0.00 2.74
3888 4297 4.036971 ACGTGGCTAGCTAGAGTAAATCAG 59.963 45.833 25.15 7.22 0.00 2.90
3903 4312 0.970937 AGCTAGCTTGGACGTGGCTA 60.971 55.000 12.68 0.64 37.50 3.93
3905 4314 0.528684 CTAGCTAGCTTGGACGTGGC 60.529 60.000 24.88 0.00 0.00 5.01
3906 4315 0.528684 GCTAGCTAGCTTGGACGTGG 60.529 60.000 33.71 0.00 45.62 4.94
3907 4316 2.964911 GCTAGCTAGCTTGGACGTG 58.035 57.895 33.71 6.03 45.62 4.49
3944 4353 4.056125 GGCTGGCGGCAAGAAACC 62.056 66.667 21.68 6.01 44.01 3.27
3954 4363 1.302383 TTGTTGTATTCCGGCTGGCG 61.302 55.000 17.39 17.39 34.14 5.69
3956 4365 0.446222 CGTTGTTGTATTCCGGCTGG 59.554 55.000 4.71 4.71 0.00 4.85
3958 4367 0.604243 TGCGTTGTTGTATTCCGGCT 60.604 50.000 0.00 0.00 0.00 5.52
3962 4371 2.646250 GTGTGTGCGTTGTTGTATTCC 58.354 47.619 0.00 0.00 0.00 3.01
3975 4384 2.241259 ATATTGTTTCGCGTGTGTGC 57.759 45.000 5.77 0.00 0.00 4.57
3979 4388 3.784199 GCGATCAATATTGTTTCGCGTGT 60.784 43.478 32.00 8.67 44.12 4.49
3985 4394 3.064820 ACCGTGGCGATCAATATTGTTTC 59.935 43.478 14.97 11.86 0.00 2.78
3986 4395 3.013921 ACCGTGGCGATCAATATTGTTT 58.986 40.909 14.97 4.54 0.00 2.83
3988 4397 2.210116 GACCGTGGCGATCAATATTGT 58.790 47.619 14.97 3.05 0.00 2.71
3989 4398 1.192312 CGACCGTGGCGATCAATATTG 59.808 52.381 9.29 9.29 0.00 1.90
3993 4402 2.890474 GCGACCGTGGCGATCAAT 60.890 61.111 3.17 0.00 0.00 2.57
3994 4403 3.982372 GAGCGACCGTGGCGATCAA 62.982 63.158 11.67 0.00 43.01 2.57
3995 4404 4.492160 GAGCGACCGTGGCGATCA 62.492 66.667 11.67 0.00 43.01 2.92
4005 4414 2.591571 AAGTAATTACGGGAGCGACC 57.408 50.000 9.91 0.00 38.08 4.79
4006 4415 6.594284 AAATAAAGTAATTACGGGAGCGAC 57.406 37.500 9.91 0.00 0.00 5.19
4007 4416 6.457257 GCAAAATAAAGTAATTACGGGAGCGA 60.457 38.462 9.91 0.00 0.00 4.93
4008 4417 5.679792 GCAAAATAAAGTAATTACGGGAGCG 59.320 40.000 9.91 0.00 0.00 5.03
4009 4418 6.792326 AGCAAAATAAAGTAATTACGGGAGC 58.208 36.000 9.91 7.61 0.00 4.70
4010 4419 8.674607 AGAAGCAAAATAAAGTAATTACGGGAG 58.325 33.333 9.91 0.00 0.00 4.30
4011 4420 8.570068 AGAAGCAAAATAAAGTAATTACGGGA 57.430 30.769 9.91 0.00 0.00 5.14
4014 4423 9.490663 CCTGAGAAGCAAAATAAAGTAATTACG 57.509 33.333 9.91 0.00 0.00 3.18
4015 4424 9.788960 CCCTGAGAAGCAAAATAAAGTAATTAC 57.211 33.333 7.57 7.57 0.00 1.89
4016 4425 9.528489 ACCCTGAGAAGCAAAATAAAGTAATTA 57.472 29.630 0.00 0.00 0.00 1.40
4017 4426 8.422577 ACCCTGAGAAGCAAAATAAAGTAATT 57.577 30.769 0.00 0.00 0.00 1.40
4021 4457 7.231467 TCTAACCCTGAGAAGCAAAATAAAGT 58.769 34.615 0.00 0.00 0.00 2.66
4026 4462 6.494835 ACAATTCTAACCCTGAGAAGCAAAAT 59.505 34.615 0.00 0.00 36.41 1.82
4027 4463 5.833131 ACAATTCTAACCCTGAGAAGCAAAA 59.167 36.000 0.00 0.00 36.41 2.44
4028 4464 5.385198 ACAATTCTAACCCTGAGAAGCAAA 58.615 37.500 0.00 0.00 36.41 3.68
4030 4466 4.041567 TGACAATTCTAACCCTGAGAAGCA 59.958 41.667 0.00 0.00 36.41 3.91
4031 4467 4.579869 TGACAATTCTAACCCTGAGAAGC 58.420 43.478 0.00 0.00 36.41 3.86
4033 4469 5.514834 CCCTTGACAATTCTAACCCTGAGAA 60.515 44.000 0.00 0.00 37.34 2.87
4034 4470 4.019321 CCCTTGACAATTCTAACCCTGAGA 60.019 45.833 0.00 0.00 0.00 3.27
4039 4475 3.451402 ACCCCTTGACAATTCTAACCC 57.549 47.619 0.00 0.00 0.00 4.11
4043 4479 3.521937 CCCTGTACCCCTTGACAATTCTA 59.478 47.826 0.00 0.00 0.00 2.10
4044 4480 2.308866 CCCTGTACCCCTTGACAATTCT 59.691 50.000 0.00 0.00 0.00 2.40
4045 4481 2.307686 TCCCTGTACCCCTTGACAATTC 59.692 50.000 0.00 0.00 0.00 2.17
4047 4483 2.053747 TCCCTGTACCCCTTGACAAT 57.946 50.000 0.00 0.00 0.00 2.71
4050 4486 4.790718 AAATATCCCTGTACCCCTTGAC 57.209 45.455 0.00 0.00 0.00 3.18
4051 4487 7.318401 AGTATAAATATCCCTGTACCCCTTGA 58.682 38.462 0.00 0.00 0.00 3.02
4060 4496 9.824216 TGTTCTAGCTAGTATAAATATCCCTGT 57.176 33.333 20.10 0.00 0.00 4.00
4081 4517 8.925338 CCCAATAGGATTAGTACTAGTTGTTCT 58.075 37.037 0.00 0.00 38.24 3.01
4082 4518 8.702819 ACCCAATAGGATTAGTACTAGTTGTTC 58.297 37.037 0.00 0.00 39.89 3.18
4083 4519 8.483758 CACCCAATAGGATTAGTACTAGTTGTT 58.516 37.037 0.00 0.00 39.89 2.83
4086 4522 8.066247 AGTCACCCAATAGGATTAGTACTAGTT 58.934 37.037 0.00 0.00 39.89 2.24
4088 4524 9.756571 ATAGTCACCCAATAGGATTAGTACTAG 57.243 37.037 2.23 0.00 39.89 2.57
4089 4525 9.529823 CATAGTCACCCAATAGGATTAGTACTA 57.470 37.037 0.00 0.00 39.89 1.82
4090 4526 7.038941 GCATAGTCACCCAATAGGATTAGTACT 60.039 40.741 0.00 0.00 39.89 2.73
4091 4527 7.038941 AGCATAGTCACCCAATAGGATTAGTAC 60.039 40.741 0.00 0.00 39.89 2.73
4092 4528 7.016914 AGCATAGTCACCCAATAGGATTAGTA 58.983 38.462 0.00 0.00 39.89 1.82
4093 4529 5.846714 AGCATAGTCACCCAATAGGATTAGT 59.153 40.000 0.00 0.00 39.89 2.24
4094 4530 6.014242 TCAGCATAGTCACCCAATAGGATTAG 60.014 42.308 0.00 0.00 39.89 1.73
4095 4531 5.843969 TCAGCATAGTCACCCAATAGGATTA 59.156 40.000 0.00 0.00 39.89 1.75
4105 4589 2.789409 AGGTTTCAGCATAGTCACCC 57.211 50.000 0.00 0.00 0.00 4.61
4106 4590 3.933332 GTGTAGGTTTCAGCATAGTCACC 59.067 47.826 0.00 0.00 0.00 4.02
4113 4597 1.346395 TGTCCGTGTAGGTTTCAGCAT 59.654 47.619 0.00 0.00 41.99 3.79
4115 4599 1.145803 GTGTCCGTGTAGGTTTCAGC 58.854 55.000 0.00 0.00 41.99 4.26
4116 4600 2.519377 TGTGTCCGTGTAGGTTTCAG 57.481 50.000 0.00 0.00 41.99 3.02
4117 4601 3.575256 AGTATGTGTCCGTGTAGGTTTCA 59.425 43.478 0.00 0.00 41.99 2.69
4119 4603 3.863400 GCAGTATGTGTCCGTGTAGGTTT 60.863 47.826 0.00 0.00 39.08 3.27
4121 4605 1.203994 GCAGTATGTGTCCGTGTAGGT 59.796 52.381 0.00 0.00 39.08 3.08
4126 4610 1.351430 CGGTGCAGTATGTGTCCGTG 61.351 60.000 0.00 0.00 39.35 4.94
4127 4611 1.080093 CGGTGCAGTATGTGTCCGT 60.080 57.895 0.00 0.00 39.35 4.69
4135 4619 0.460311 GGCTCTGTACGGTGCAGTAT 59.540 55.000 25.52 0.00 35.60 2.12
4137 4621 2.657237 GGCTCTGTACGGTGCAGT 59.343 61.111 25.52 0.00 35.60 4.40
4139 4623 2.920384 TGGGCTCTGTACGGTGCA 60.920 61.111 25.52 7.70 0.00 4.57
4140 4624 2.434359 GTGGGCTCTGTACGGTGC 60.434 66.667 18.38 18.38 0.00 5.01
4141 4625 2.126071 CGTGGGCTCTGTACGGTG 60.126 66.667 0.64 0.00 34.43 4.94
4142 4626 2.599578 ACGTGGGCTCTGTACGGT 60.600 61.111 0.64 0.00 41.74 4.83
4143 4627 2.126071 CACGTGGGCTCTGTACGG 60.126 66.667 7.95 0.00 41.74 4.02
4145 4629 0.599558 TACACACGTGGGCTCTGTAC 59.400 55.000 19.95 0.00 34.19 2.90
4146 4630 0.599558 GTACACACGTGGGCTCTGTA 59.400 55.000 19.95 14.47 34.19 2.74
4147 4631 1.113517 AGTACACACGTGGGCTCTGT 61.114 55.000 19.95 15.56 34.19 3.41
4148 4632 0.388649 GAGTACACACGTGGGCTCTG 60.389 60.000 19.95 9.79 34.76 3.35
4150 4634 1.443872 CGAGTACACACGTGGGCTC 60.444 63.158 19.95 16.15 34.49 4.70
4151 4635 2.198287 ACGAGTACACACGTGGGCT 61.198 57.895 19.95 7.84 41.31 5.19
4157 4641 2.969306 GAGTTACACACGAGTACACACG 59.031 50.000 0.00 0.42 36.07 4.49
4158 4642 3.243168 TGGAGTTACACACGAGTACACAC 60.243 47.826 0.00 0.00 0.00 3.82
4159 4643 2.950975 TGGAGTTACACACGAGTACACA 59.049 45.455 0.00 0.00 0.00 3.72
4160 4644 3.631145 TGGAGTTACACACGAGTACAC 57.369 47.619 0.00 0.00 0.00 2.90
4161 4645 3.380954 TGTTGGAGTTACACACGAGTACA 59.619 43.478 0.00 0.00 0.00 2.90
4162 4646 3.968649 TGTTGGAGTTACACACGAGTAC 58.031 45.455 0.00 0.00 0.00 2.73
4163 4647 4.038282 ACATGTTGGAGTTACACACGAGTA 59.962 41.667 0.00 0.00 0.00 2.59
4164 4648 3.181469 ACATGTTGGAGTTACACACGAGT 60.181 43.478 0.00 0.00 0.00 4.18
4165 4649 3.390135 ACATGTTGGAGTTACACACGAG 58.610 45.455 0.00 0.00 0.00 4.18
4169 4653 4.062293 GCAGTACATGTTGGAGTTACACA 58.938 43.478 2.30 0.00 0.00 3.72
4172 4656 3.125316 GCTGCAGTACATGTTGGAGTTAC 59.875 47.826 16.64 3.21 35.48 2.50
4228 6334 5.596836 AATATTGGTGCATGGAAACGATT 57.403 34.783 0.00 0.00 0.00 3.34
4232 6338 7.763528 TGTTTCATAATATTGGTGCATGGAAAC 59.236 33.333 0.00 0.00 0.00 2.78
4282 6388 2.474133 TTAGGAGGGGCGGGGTTGTA 62.474 60.000 0.00 0.00 0.00 2.41
4283 6389 3.876255 TTAGGAGGGGCGGGGTTGT 62.876 63.158 0.00 0.00 0.00 3.32
4284 6390 3.012722 TTAGGAGGGGCGGGGTTG 61.013 66.667 0.00 0.00 0.00 3.77
4285 6391 3.013327 GTTAGGAGGGGCGGGGTT 61.013 66.667 0.00 0.00 0.00 4.11
4287 6393 3.793888 GTGTTAGGAGGGGCGGGG 61.794 72.222 0.00 0.00 0.00 5.73
4288 6394 4.157120 CGTGTTAGGAGGGGCGGG 62.157 72.222 0.00 0.00 0.00 6.13
4289 6395 1.397390 ATACGTGTTAGGAGGGGCGG 61.397 60.000 0.00 0.00 0.00 6.13
4290 6396 1.321474 TATACGTGTTAGGAGGGGCG 58.679 55.000 0.00 0.00 0.00 6.13
4292 6398 3.007614 CCCAATATACGTGTTAGGAGGGG 59.992 52.174 0.00 0.00 0.00 4.79
4293 6399 3.644738 ACCCAATATACGTGTTAGGAGGG 59.355 47.826 0.00 3.49 38.52 4.30
4295 6401 6.645790 ACTACCCAATATACGTGTTAGGAG 57.354 41.667 0.00 0.00 0.00 3.69
4296 6402 7.177216 CCATACTACCCAATATACGTGTTAGGA 59.823 40.741 0.00 0.00 0.00 2.94
4298 6404 7.889469 ACCATACTACCCAATATACGTGTTAG 58.111 38.462 0.00 0.00 0.00 2.34
4299 6405 7.838079 ACCATACTACCCAATATACGTGTTA 57.162 36.000 0.00 0.00 0.00 2.41
4300 6406 6.736110 ACCATACTACCCAATATACGTGTT 57.264 37.500 0.00 0.00 0.00 3.32
4301 6407 6.736110 AACCATACTACCCAATATACGTGT 57.264 37.500 0.00 0.00 0.00 4.49
4302 6408 9.715121 AAATAACCATACTACCCAATATACGTG 57.285 33.333 0.00 0.00 0.00 4.49
4303 6409 9.933723 GAAATAACCATACTACCCAATATACGT 57.066 33.333 0.00 0.00 0.00 3.57
4308 6414 9.567776 CATGTGAAATAACCATACTACCCAATA 57.432 33.333 0.00 0.00 0.00 1.90
4309 6415 7.505585 CCATGTGAAATAACCATACTACCCAAT 59.494 37.037 0.00 0.00 0.00 3.16
4310 6416 6.831353 CCATGTGAAATAACCATACTACCCAA 59.169 38.462 0.00 0.00 0.00 4.12
4311 6417 6.158871 TCCATGTGAAATAACCATACTACCCA 59.841 38.462 0.00 0.00 0.00 4.51
4312 6418 6.485648 GTCCATGTGAAATAACCATACTACCC 59.514 42.308 0.00 0.00 0.00 3.69
4313 6419 6.202188 CGTCCATGTGAAATAACCATACTACC 59.798 42.308 0.00 0.00 0.00 3.18
4314 6420 6.759827 ACGTCCATGTGAAATAACCATACTAC 59.240 38.462 0.00 0.00 0.00 2.73
4315 6421 6.880484 ACGTCCATGTGAAATAACCATACTA 58.120 36.000 0.00 0.00 0.00 1.82
4316 6422 5.741011 ACGTCCATGTGAAATAACCATACT 58.259 37.500 0.00 0.00 0.00 2.12
4318 6424 8.862085 TCTATACGTCCATGTGAAATAACCATA 58.138 33.333 0.00 0.00 0.00 2.74
4319 6425 7.732025 TCTATACGTCCATGTGAAATAACCAT 58.268 34.615 0.00 0.00 0.00 3.55
4320 6426 7.114866 TCTATACGTCCATGTGAAATAACCA 57.885 36.000 0.00 0.00 0.00 3.67
4321 6427 8.603242 ATTCTATACGTCCATGTGAAATAACC 57.397 34.615 0.00 0.00 0.00 2.85
4323 6429 9.701098 GGTATTCTATACGTCCATGTGAAATAA 57.299 33.333 0.00 0.00 0.00 1.40
4325 6431 7.159372 GGGTATTCTATACGTCCATGTGAAAT 58.841 38.462 0.00 0.00 0.00 2.17
4326 6432 6.098552 TGGGTATTCTATACGTCCATGTGAAA 59.901 38.462 0.00 0.00 0.00 2.69
4327 6433 5.599242 TGGGTATTCTATACGTCCATGTGAA 59.401 40.000 0.00 0.00 0.00 3.18
4329 6435 5.227908 GTGGGTATTCTATACGTCCATGTG 58.772 45.833 0.00 0.00 0.00 3.21
4330 6436 4.282703 GGTGGGTATTCTATACGTCCATGT 59.717 45.833 0.00 0.00 0.00 3.21
4331 6437 4.322499 GGGTGGGTATTCTATACGTCCATG 60.322 50.000 0.00 0.00 0.00 3.66
4332 6438 3.836562 GGGTGGGTATTCTATACGTCCAT 59.163 47.826 0.00 0.00 0.00 3.41
4333 6439 3.233507 GGGTGGGTATTCTATACGTCCA 58.766 50.000 0.00 0.00 0.00 4.02
4334 6440 2.229784 CGGGTGGGTATTCTATACGTCC 59.770 54.545 0.00 0.00 0.00 4.79
4335 6441 2.352127 GCGGGTGGGTATTCTATACGTC 60.352 54.545 0.00 0.00 0.00 4.34
4336 6442 1.615392 GCGGGTGGGTATTCTATACGT 59.385 52.381 0.00 0.00 0.00 3.57
4337 6443 1.067354 GGCGGGTGGGTATTCTATACG 60.067 57.143 0.00 0.00 0.00 3.06
4339 6445 2.253610 CAGGCGGGTGGGTATTCTATA 58.746 52.381 0.00 0.00 0.00 1.31
4340 6446 1.056660 CAGGCGGGTGGGTATTCTAT 58.943 55.000 0.00 0.00 0.00 1.98
4342 6448 3.043999 GCAGGCGGGTGGGTATTCT 62.044 63.158 0.00 0.00 0.00 2.40
4343 6449 2.516225 GCAGGCGGGTGGGTATTC 60.516 66.667 0.00 0.00 0.00 1.75
4344 6450 4.483243 CGCAGGCGGGTGGGTATT 62.483 66.667 5.63 0.00 35.56 1.89
4352 6458 3.529341 TATGGCATACGCAGGCGGG 62.529 63.158 18.63 8.12 44.69 6.13
4353 6459 2.030412 TATGGCATACGCAGGCGG 59.970 61.111 18.63 1.25 44.69 6.13
4354 6460 2.317609 GGTATGGCATACGCAGGCG 61.318 63.158 26.53 12.71 46.03 5.52
4355 6461 2.317609 CGGTATGGCATACGCAGGC 61.318 63.158 26.53 14.19 41.24 4.85
4357 6463 0.944311 GACCGGTATGGCATACGCAG 60.944 60.000 26.53 20.18 43.94 5.18
4358 6464 1.068417 GACCGGTATGGCATACGCA 59.932 57.895 26.53 0.00 43.94 5.24
4360 6466 0.599204 GGTGACCGGTATGGCATACG 60.599 60.000 26.53 21.32 43.94 3.06
4361 6467 0.250166 GGGTGACCGGTATGGCATAC 60.250 60.000 25.92 25.92 43.64 2.39
4362 6468 2.138595 GGGTGACCGGTATGGCATA 58.861 57.895 7.34 2.32 43.64 3.14
4363 6469 2.915869 GGGTGACCGGTATGGCAT 59.084 61.111 7.34 4.88 43.64 4.40
4374 6480 1.514553 GGGCTAGTGTACGGGTGAC 59.485 63.158 0.00 0.00 0.00 3.67
4375 6481 1.683365 GGGGCTAGTGTACGGGTGA 60.683 63.158 0.00 0.00 0.00 4.02
4377 6483 2.364710 GGGGGCTAGTGTACGGGT 60.365 66.667 0.00 0.00 0.00 5.28
4379 6485 1.453745 TACGGGGGCTAGTGTACGG 60.454 63.158 0.00 0.00 0.00 4.02
4380 6486 1.031571 TGTACGGGGGCTAGTGTACG 61.032 60.000 0.00 0.00 39.95 3.67
4381 6487 1.068127 CATGTACGGGGGCTAGTGTAC 59.932 57.143 0.00 0.00 38.10 2.90
4382 6488 1.405872 CATGTACGGGGGCTAGTGTA 58.594 55.000 0.00 0.00 0.00 2.90
4383 6489 1.335132 CCATGTACGGGGGCTAGTGT 61.335 60.000 0.00 0.00 0.00 3.55
4384 6490 1.335132 ACCATGTACGGGGGCTAGTG 61.335 60.000 8.12 0.00 0.00 2.74
4387 6493 2.129146 CGACCATGTACGGGGGCTA 61.129 63.158 6.87 0.00 0.00 3.93
4388 6494 3.467226 CGACCATGTACGGGGGCT 61.467 66.667 6.87 0.00 0.00 5.19
4390 6496 4.540735 GGCGACCATGTACGGGGG 62.541 72.222 8.12 2.45 0.00 5.40
4391 6497 4.884257 CGGCGACCATGTACGGGG 62.884 72.222 0.00 4.87 0.00 5.73
4392 6498 2.079020 ATACGGCGACCATGTACGGG 62.079 60.000 16.62 2.04 0.00 5.28
4393 6499 0.937699 CATACGGCGACCATGTACGG 60.938 60.000 16.62 0.00 0.00 4.02
4394 6500 1.545614 GCATACGGCGACCATGTACG 61.546 60.000 16.62 4.75 0.00 3.67
4395 6501 1.219522 GGCATACGGCGACCATGTAC 61.220 60.000 16.62 7.74 46.16 2.90
4396 6502 1.068417 GGCATACGGCGACCATGTA 59.932 57.895 16.62 0.00 46.16 2.29
4397 6503 2.203015 GGCATACGGCGACCATGT 60.203 61.111 16.62 0.00 46.16 3.21
4398 6504 2.972505 GGGCATACGGCGACCATG 60.973 66.667 16.62 14.67 46.16 3.66
4400 6506 4.460683 GTGGGCATACGGCGACCA 62.461 66.667 16.62 10.84 46.16 4.02
4406 6512 3.615509 AACACGGGTGGGCATACGG 62.616 63.158 0.00 0.00 34.19 4.02
4408 6514 2.696759 GCAACACGGGTGGGCATAC 61.697 63.158 9.62 0.00 35.82 2.39
4410 6516 4.284550 AGCAACACGGGTGGGCAT 62.285 61.111 16.01 0.21 37.43 4.40
4414 6520 1.227704 TGTACAGCAACACGGGTGG 60.228 57.895 0.00 0.00 40.47 4.61
4415 6521 1.938861 GTGTACAGCAACACGGGTG 59.061 57.895 0.00 0.00 40.31 4.61
4416 6522 4.449391 GTGTACAGCAACACGGGT 57.551 55.556 0.00 0.00 40.31 5.28
4421 6527 1.664874 CGACGCTAGTGTACAGCAACA 60.665 52.381 9.36 0.00 39.04 3.33
4422 6528 0.982673 CGACGCTAGTGTACAGCAAC 59.017 55.000 9.36 0.00 39.04 4.17
4423 6529 0.594602 ACGACGCTAGTGTACAGCAA 59.405 50.000 9.36 0.00 39.04 3.91
4424 6530 0.594602 AACGACGCTAGTGTACAGCA 59.405 50.000 9.36 0.00 39.04 4.41
4425 6531 2.159599 AGTAACGACGCTAGTGTACAGC 60.160 50.000 9.36 0.00 35.61 4.40
4426 6532 3.736530 AGTAACGACGCTAGTGTACAG 57.263 47.619 9.36 6.70 0.00 2.74
4430 6536 2.291465 TCACAAGTAACGACGCTAGTGT 59.709 45.455 9.11 9.11 0.00 3.55
4432 6538 3.631145 TTCACAAGTAACGACGCTAGT 57.369 42.857 0.00 0.00 0.00 2.57
4433 6539 4.959631 TTTTCACAAGTAACGACGCTAG 57.040 40.909 0.00 0.00 0.00 3.42
4455 6561 1.270550 CAAGTCATGCTCGGGCTTTTT 59.729 47.619 9.62 0.00 39.59 1.94
4456 6562 0.883833 CAAGTCATGCTCGGGCTTTT 59.116 50.000 9.62 0.00 39.59 2.27
4457 6563 0.250901 ACAAGTCATGCTCGGGCTTT 60.251 50.000 9.62 0.00 39.59 3.51
4459 6565 0.957395 CAACAAGTCATGCTCGGGCT 60.957 55.000 9.62 0.00 39.59 5.19
4460 6566 0.955428 TCAACAAGTCATGCTCGGGC 60.955 55.000 0.00 0.00 39.26 6.13
4461 6567 0.798776 GTCAACAAGTCATGCTCGGG 59.201 55.000 0.00 0.00 0.00 5.14
4463 6569 0.179240 GCGTCAACAAGTCATGCTCG 60.179 55.000 0.00 0.00 0.00 5.03
4464 6570 0.166814 GGCGTCAACAAGTCATGCTC 59.833 55.000 0.00 0.00 0.00 4.26
4465 6571 0.250467 AGGCGTCAACAAGTCATGCT 60.250 50.000 0.00 0.00 0.00 3.79
4466 6572 0.166814 GAGGCGTCAACAAGTCATGC 59.833 55.000 0.52 0.00 0.00 4.06
4467 6573 1.511850 TGAGGCGTCAACAAGTCATG 58.488 50.000 6.64 0.00 0.00 3.07
4468 6574 2.079158 CATGAGGCGTCAACAAGTCAT 58.921 47.619 13.87 0.00 35.88 3.06
4469 6575 1.202639 ACATGAGGCGTCAACAAGTCA 60.203 47.619 13.87 0.00 35.88 3.41
4471 6577 1.512926 GACATGAGGCGTCAACAAGT 58.487 50.000 13.87 9.66 35.88 3.16
4474 6580 0.032815 TTCGACATGAGGCGTCAACA 59.967 50.000 13.87 0.00 35.88 3.33
4476 6582 1.144969 GTTTCGACATGAGGCGTCAA 58.855 50.000 13.87 0.00 35.88 3.18
4477 6583 0.669318 GGTTTCGACATGAGGCGTCA 60.669 55.000 12.13 12.13 37.02 4.35
4478 6584 1.359459 GGGTTTCGACATGAGGCGTC 61.359 60.000 0.00 0.00 0.00 5.19
4479 6585 1.375523 GGGTTTCGACATGAGGCGT 60.376 57.895 0.00 0.00 0.00 5.68
4480 6586 0.953471 TTGGGTTTCGACATGAGGCG 60.953 55.000 0.00 0.00 0.00 5.52
4481 6587 0.804989 CTTGGGTTTCGACATGAGGC 59.195 55.000 0.00 0.00 0.00 4.70
4483 6589 1.806542 CCACTTGGGTTTCGACATGAG 59.193 52.381 0.00 0.00 0.00 2.90
4484 6590 1.890876 CCACTTGGGTTTCGACATGA 58.109 50.000 0.00 0.00 0.00 3.07
4485 6591 0.240945 GCCACTTGGGTTTCGACATG 59.759 55.000 0.00 0.00 39.65 3.21
4486 6592 1.234615 CGCCACTTGGGTTTCGACAT 61.235 55.000 0.00 0.00 39.65 3.06
4487 6593 1.890041 CGCCACTTGGGTTTCGACA 60.890 57.895 0.00 0.00 39.65 4.35
4488 6594 2.613506 CCGCCACTTGGGTTTCGAC 61.614 63.158 0.00 0.00 39.65 4.20
4491 6597 1.583495 GCTACCGCCACTTGGGTTTC 61.583 60.000 0.00 0.00 39.65 2.78
4492 6598 1.602605 GCTACCGCCACTTGGGTTT 60.603 57.895 0.00 0.00 39.65 3.27
4493 6599 2.033602 GCTACCGCCACTTGGGTT 59.966 61.111 0.00 0.00 39.65 4.11
4494 6600 4.388499 CGCTACCGCCACTTGGGT 62.388 66.667 0.00 0.00 39.65 4.51
4495 6601 3.894547 AACGCTACCGCCACTTGGG 62.895 63.158 0.00 0.00 38.22 4.12
4496 6602 2.358247 AACGCTACCGCCACTTGG 60.358 61.111 0.00 0.00 38.22 3.61
4498 6604 2.047560 GGAACGCTACCGCCACTT 60.048 61.111 0.00 0.00 38.22 3.16
4499 6605 3.296709 CTGGAACGCTACCGCCACT 62.297 63.158 0.00 0.00 38.22 4.00
4501 6607 3.291101 GACTGGAACGCTACCGCCA 62.291 63.158 0.00 0.00 38.22 5.69
4502 6608 2.508663 GACTGGAACGCTACCGCC 60.509 66.667 0.00 0.00 38.22 6.13
4503 6609 2.879462 CGACTGGAACGCTACCGC 60.879 66.667 0.00 0.00 38.22 5.68
4510 6616 3.083600 GAATGCGGCGACTGGAACG 62.084 63.158 12.98 0.00 0.00 3.95
4511 6617 2.750888 GGAATGCGGCGACTGGAAC 61.751 63.158 12.98 0.00 0.00 3.62
4512 6618 2.435938 GGAATGCGGCGACTGGAA 60.436 61.111 12.98 0.00 0.00 3.53
4513 6619 2.852495 GAAGGAATGCGGCGACTGGA 62.852 60.000 12.98 0.00 0.00 3.86
4514 6620 2.436646 AAGGAATGCGGCGACTGG 60.437 61.111 12.98 0.00 0.00 4.00
4515 6621 2.464459 GGAAGGAATGCGGCGACTG 61.464 63.158 12.98 0.00 0.00 3.51
4516 6622 2.125106 GGAAGGAATGCGGCGACT 60.125 61.111 12.98 0.00 0.00 4.18
4517 6623 3.202706 GGGAAGGAATGCGGCGAC 61.203 66.667 12.98 2.02 0.00 5.19
4518 6624 4.830765 CGGGAAGGAATGCGGCGA 62.831 66.667 12.98 0.00 0.00 5.54
4522 6628 3.204827 CTGCCGGGAAGGAATGCG 61.205 66.667 2.18 0.00 45.00 4.73
4523 6629 2.044946 ACTGCCGGGAAGGAATGC 60.045 61.111 7.04 0.00 45.00 3.56
4524 6630 1.815421 CGACTGCCGGGAAGGAATG 60.815 63.158 7.04 0.00 45.00 2.67
4525 6631 2.240162 GACGACTGCCGGGAAGGAAT 62.240 60.000 7.04 0.00 45.00 3.01
4528 6634 4.796231 CGACGACTGCCGGGAAGG 62.796 72.222 7.04 0.00 43.93 3.46
4536 7819 2.126424 GAGGGTGACGACGACTGC 60.126 66.667 0.00 0.00 0.00 4.40
4539 7822 2.257676 GTGGAGGGTGACGACGAC 59.742 66.667 0.00 0.00 0.00 4.34
4540 7823 3.359523 CGTGGAGGGTGACGACGA 61.360 66.667 0.00 0.00 40.69 4.20
4545 7828 4.699522 GGCCACGTGGAGGGTGAC 62.700 72.222 38.30 17.74 37.60 3.67
4561 7844 4.090588 TTTGGGCGGCGACTAGGG 62.091 66.667 14.66 0.00 0.00 3.53
4562 7845 2.818274 GTTTGGGCGGCGACTAGG 60.818 66.667 14.66 0.00 0.00 3.02
4563 7846 1.669760 TTGTTTGGGCGGCGACTAG 60.670 57.895 14.66 0.00 0.00 2.57
4564 7847 1.962306 GTTGTTTGGGCGGCGACTA 60.962 57.895 14.66 2.22 0.00 2.59
4565 7848 3.284449 GTTGTTTGGGCGGCGACT 61.284 61.111 14.66 0.00 0.00 4.18
4566 7849 3.587933 TGTTGTTTGGGCGGCGAC 61.588 61.111 12.98 8.16 0.00 5.19
4570 7853 4.639171 GGCGTGTTGTTTGGGCGG 62.639 66.667 0.00 0.00 0.00 6.13
4573 7856 4.973360 CGCGGCGTGTTGTTTGGG 62.973 66.667 15.36 0.00 0.00 4.12
4606 7889 3.023832 CAAATAGGGTTTAGCCTGTGGG 58.976 50.000 10.65 0.00 37.43 4.61
4607 7890 3.443681 CACAAATAGGGTTTAGCCTGTGG 59.556 47.826 10.65 3.51 35.80 4.17
4608 7891 4.331968 TCACAAATAGGGTTTAGCCTGTG 58.668 43.478 10.65 10.40 38.82 3.66
4609 7892 4.650972 TCACAAATAGGGTTTAGCCTGT 57.349 40.909 10.65 0.90 37.43 4.00
4611 7894 4.080526 ACGATCACAAATAGGGTTTAGCCT 60.081 41.667 5.72 5.72 37.43 4.58
4612 7895 4.196971 ACGATCACAAATAGGGTTTAGCC 58.803 43.478 0.00 0.00 0.00 3.93
4614 7897 4.025979 GCGACGATCACAAATAGGGTTTAG 60.026 45.833 0.00 0.00 0.00 1.85
4615 7898 3.866910 GCGACGATCACAAATAGGGTTTA 59.133 43.478 0.00 0.00 0.00 2.01
4616 7899 2.676342 GCGACGATCACAAATAGGGTTT 59.324 45.455 0.00 0.00 0.00 3.27
4617 7900 2.093658 AGCGACGATCACAAATAGGGTT 60.094 45.455 0.00 0.00 0.00 4.11
4618 7901 1.480954 AGCGACGATCACAAATAGGGT 59.519 47.619 0.00 0.00 0.00 4.34
4619 7902 1.860950 CAGCGACGATCACAAATAGGG 59.139 52.381 0.00 0.00 0.00 3.53
4622 7905 1.926510 CTGCAGCGACGATCACAAATA 59.073 47.619 0.00 0.00 0.00 1.40
4623 7906 0.723414 CTGCAGCGACGATCACAAAT 59.277 50.000 0.00 0.00 0.00 2.32
4624 7907 1.900585 GCTGCAGCGACGATCACAAA 61.901 55.000 25.23 0.00 0.00 2.83
4625 7908 2.382746 GCTGCAGCGACGATCACAA 61.383 57.895 25.23 0.00 0.00 3.33
4626 7909 2.810887 GCTGCAGCGACGATCACA 60.811 61.111 25.23 0.00 0.00 3.58
4627 7910 3.558411 GGCTGCAGCGACGATCAC 61.558 66.667 31.19 11.96 43.26 3.06
4628 7911 4.067913 TGGCTGCAGCGACGATCA 62.068 61.111 31.19 19.65 43.26 2.92
4629 7912 3.558411 GTGGCTGCAGCGACGATC 61.558 66.667 33.34 19.06 39.79 3.69
4636 7919 2.472909 GGAATACGGTGGCTGCAGC 61.473 63.158 30.88 30.88 41.14 5.25
4638 7921 0.676466 CAAGGAATACGGTGGCTGCA 60.676 55.000 0.50 0.00 0.00 4.41
4640 7923 0.035439 ACCAAGGAATACGGTGGCTG 60.035 55.000 0.00 0.00 33.77 4.85
4641 7924 0.252197 GACCAAGGAATACGGTGGCT 59.748 55.000 0.00 0.00 33.77 4.75
4643 7926 0.248289 ACGACCAAGGAATACGGTGG 59.752 55.000 0.00 0.00 35.83 4.61
4645 7928 0.171903 CGACGACCAAGGAATACGGT 59.828 55.000 0.00 0.00 35.12 4.83
4646 7929 1.143969 GCGACGACCAAGGAATACGG 61.144 60.000 0.00 0.00 0.00 4.02
4647 7930 1.143969 GGCGACGACCAAGGAATACG 61.144 60.000 0.00 0.00 0.00 3.06
4648 7931 0.808847 GGGCGACGACCAAGGAATAC 60.809 60.000 16.92 0.00 0.00 1.89
4649 7932 1.518774 GGGCGACGACCAAGGAATA 59.481 57.895 16.92 0.00 0.00 1.75
4673 7956 3.195698 GATTCACGGGCAGACGGC 61.196 66.667 0.00 0.00 43.74 5.68
4674 7957 1.079127 AAGATTCACGGGCAGACGG 60.079 57.895 0.00 0.00 38.39 4.79
4675 7958 0.389817 TGAAGATTCACGGGCAGACG 60.390 55.000 0.00 0.00 40.31 4.18
4677 7960 1.471501 CGATGAAGATTCACGGGCAGA 60.472 52.381 0.00 0.00 40.49 4.26
4678 7961 0.933097 CGATGAAGATTCACGGGCAG 59.067 55.000 0.00 0.00 40.49 4.85
4680 7963 1.643832 GCGATGAAGATTCACGGGC 59.356 57.895 14.68 8.33 40.49 6.13
4682 7965 0.806102 ACGGCGATGAAGATTCACGG 60.806 55.000 16.62 5.47 40.49 4.94
4683 7966 0.298707 CACGGCGATGAAGATTCACG 59.701 55.000 16.62 5.50 40.49 4.35
4684 7967 0.652592 CCACGGCGATGAAGATTCAC 59.347 55.000 16.62 0.00 40.49 3.18
4685 7968 0.461870 CCCACGGCGATGAAGATTCA 60.462 55.000 16.62 0.00 42.14 2.57
4686 7969 0.462047 ACCCACGGCGATGAAGATTC 60.462 55.000 16.62 0.00 0.00 2.52
4687 7970 0.744414 CACCCACGGCGATGAAGATT 60.744 55.000 16.62 0.00 0.00 2.40
4689 7972 2.264480 CACCCACGGCGATGAAGA 59.736 61.111 16.62 0.00 0.00 2.87
4690 7973 3.499737 GCACCCACGGCGATGAAG 61.500 66.667 16.62 5.98 0.00 3.02
4692 7975 3.620419 AATGCACCCACGGCGATGA 62.620 57.895 16.62 0.00 0.00 2.92
4693 7976 3.112126 GAATGCACCCACGGCGATG 62.112 63.158 16.62 8.29 0.00 3.84
4694 7977 2.824041 GAATGCACCCACGGCGAT 60.824 61.111 16.62 0.00 0.00 4.58
4695 7978 3.620419 ATGAATGCACCCACGGCGA 62.620 57.895 16.62 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.