Multiple sequence alignment - TraesCS6B01G469200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G469200 chr6B 100.000 3149 0 0 1 3149 718251658 718254806 0.000000e+00 5816
1 TraesCS6B01G469200 chr6B 80.561 535 72 20 1816 2328 718596972 718596448 1.770000e-102 383
2 TraesCS6B01G469200 chr6B 100.000 107 0 0 596 702 708819470 708819576 6.890000e-47 198
3 TraesCS6B01G469200 chr6B 94.915 118 5 1 585 702 30889192 30889076 1.930000e-42 183
4 TraesCS6B01G469200 chr6A 93.652 2048 76 31 1110 3149 616890930 616888929 0.000000e+00 3013
5 TraesCS6B01G469200 chr6A 88.462 416 21 11 711 1116 616892742 616892344 7.900000e-131 477
6 TraesCS6B01G469200 chr6A 79.926 269 18 15 329 584 616892990 616892745 6.990000e-37 165
7 TraesCS6B01G469200 chr6A 92.857 84 3 3 243 324 616900335 616900253 5.520000e-23 119
8 TraesCS6B01G469200 chr6D 86.261 1412 163 21 918 2328 24933912 24935293 0.000000e+00 1504
9 TraesCS6B01G469200 chr7D 77.007 1283 179 64 1402 2593 602287168 602288425 2.060000e-176 628
10 TraesCS6B01G469200 chr7D 74.052 844 175 34 974 1794 566519909 566520731 3.950000e-79 305
11 TraesCS6B01G469200 chr7A 75.524 1528 242 78 1162 2598 694044589 694046075 2.060000e-176 628
12 TraesCS6B01G469200 chr7A 84.838 277 34 5 1519 1794 674140039 674139770 4.000000e-69 272
13 TraesCS6B01G469200 chrUn 76.090 1330 237 49 975 2250 330579685 330578383 1.240000e-173 619
14 TraesCS6B01G469200 chrUn 76.180 1377 206 70 1311 2598 87052437 87051094 5.770000e-172 614
15 TraesCS6B01G469200 chrUn 96.396 111 4 0 596 706 36601705 36601815 1.930000e-42 183
16 TraesCS6B01G469200 chrUn 96.396 111 4 0 596 706 269192159 269192269 1.930000e-42 183
17 TraesCS6B01G469200 chr7B 75.940 1330 241 46 975 2250 726363255 726361951 7.470000e-171 610
18 TraesCS6B01G469200 chr7B 77.108 830 163 16 1311 2125 608477763 608476946 3.700000e-124 455
19 TraesCS6B01G469200 chr7B 80.698 430 75 4 1828 2250 713513083 713512655 8.420000e-86 327
20 TraesCS6B01G469200 chr7B 72.857 840 185 29 978 1794 620679121 620678302 6.740000e-62 248
21 TraesCS6B01G469200 chr5D 77.578 1057 165 49 1311 2313 423534993 423533955 9.800000e-160 573
22 TraesCS6B01G469200 chr5D 88.235 255 30 0 1532 1786 497820861 497821115 3.950000e-79 305
23 TraesCS6B01G469200 chr5A 77.113 1053 174 45 1311 2313 537124634 537123599 5.940000e-152 547
24 TraesCS6B01G469200 chr5A 90.265 226 21 1 1 225 350513159 350512934 8.540000e-76 294
25 TraesCS6B01G469200 chr1D 77.608 853 151 27 1000 1838 458872270 458873096 6.110000e-132 481
26 TraesCS6B01G469200 chr1D 97.273 220 5 1 1 219 494019399 494019180 3.840000e-99 372
27 TraesCS6B01G469200 chr1A 76.622 817 155 23 987 1791 551307362 551308154 4.860000e-113 418
28 TraesCS6B01G469200 chr1A 90.308 227 21 1 1 226 28929972 28929746 2.370000e-76 296
29 TraesCS6B01G469200 chr1A 89.732 224 22 1 1 223 42520980 42520757 5.140000e-73 285
30 TraesCS6B01G469200 chr1B 96.861 223 7 0 1 223 588256895 588256673 1.070000e-99 374
31 TraesCS6B01G469200 chr1B 95.909 220 8 1 1 220 409305037 409305255 3.860000e-94 355
32 TraesCS6B01G469200 chr1B 97.030 202 6 0 1 202 564652769 564652568 1.080000e-89 340
33 TraesCS6B01G469200 chr1B 76.793 237 42 10 987 1215 630725165 630725396 1.530000e-23 121
34 TraesCS6B01G469200 chr3A 90.625 224 20 1 1 223 1712374 1712597 2.370000e-76 296
35 TraesCS6B01G469200 chr3B 90.179 224 21 1 1 223 27855667 27855890 1.100000e-74 291
36 TraesCS6B01G469200 chr5B 96.491 114 3 1 593 705 684616493 684616606 1.490000e-43 187
37 TraesCS6B01G469200 chr5B 95.536 112 5 0 591 702 278886875 278886986 2.500000e-41 180
38 TraesCS6B01G469200 chr4A 94.872 117 6 0 587 703 381221442 381221326 1.930000e-42 183
39 TraesCS6B01G469200 chr4A 92.000 125 9 1 596 720 593739024 593739147 1.160000e-39 174
40 TraesCS6B01G469200 chr3D 92.742 124 6 2 593 713 143958723 143958600 3.230000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G469200 chr6B 718251658 718254806 3148 False 5816.000000 5816 100.000000 1 3149 1 chr6B.!!$F2 3148
1 TraesCS6B01G469200 chr6B 718596448 718596972 524 True 383.000000 383 80.561000 1816 2328 1 chr6B.!!$R2 512
2 TraesCS6B01G469200 chr6A 616888929 616892990 4061 True 1218.333333 3013 87.346667 329 3149 3 chr6A.!!$R2 2820
3 TraesCS6B01G469200 chr6D 24933912 24935293 1381 False 1504.000000 1504 86.261000 918 2328 1 chr6D.!!$F1 1410
4 TraesCS6B01G469200 chr7D 602287168 602288425 1257 False 628.000000 628 77.007000 1402 2593 1 chr7D.!!$F2 1191
5 TraesCS6B01G469200 chr7D 566519909 566520731 822 False 305.000000 305 74.052000 974 1794 1 chr7D.!!$F1 820
6 TraesCS6B01G469200 chr7A 694044589 694046075 1486 False 628.000000 628 75.524000 1162 2598 1 chr7A.!!$F1 1436
7 TraesCS6B01G469200 chrUn 330578383 330579685 1302 True 619.000000 619 76.090000 975 2250 1 chrUn.!!$R2 1275
8 TraesCS6B01G469200 chrUn 87051094 87052437 1343 True 614.000000 614 76.180000 1311 2598 1 chrUn.!!$R1 1287
9 TraesCS6B01G469200 chr7B 726361951 726363255 1304 True 610.000000 610 75.940000 975 2250 1 chr7B.!!$R4 1275
10 TraesCS6B01G469200 chr7B 608476946 608477763 817 True 455.000000 455 77.108000 1311 2125 1 chr7B.!!$R1 814
11 TraesCS6B01G469200 chr7B 620678302 620679121 819 True 248.000000 248 72.857000 978 1794 1 chr7B.!!$R2 816
12 TraesCS6B01G469200 chr5D 423533955 423534993 1038 True 573.000000 573 77.578000 1311 2313 1 chr5D.!!$R1 1002
13 TraesCS6B01G469200 chr5A 537123599 537124634 1035 True 547.000000 547 77.113000 1311 2313 1 chr5A.!!$R2 1002
14 TraesCS6B01G469200 chr1D 458872270 458873096 826 False 481.000000 481 77.608000 1000 1838 1 chr1D.!!$F1 838
15 TraesCS6B01G469200 chr1A 551307362 551308154 792 False 418.000000 418 76.622000 987 1791 1 chr1A.!!$F1 804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.106894 GGCTCCGAAACTCCCCTATG 59.893 60.0 0.0 0.0 0.0 2.23 F
306 307 0.108615 ATCCGTGACAGAAGCGAAGG 60.109 55.0 0.0 0.0 0.0 3.46 F
308 309 0.319555 CCGTGACAGAAGCGAAGGAA 60.320 55.0 0.0 0.0 0.0 3.36 F
311 312 0.320771 TGACAGAAGCGAAGGAAGGC 60.321 55.0 0.0 0.0 0.0 4.35 F
312 313 0.320771 GACAGAAGCGAAGGAAGGCA 60.321 55.0 0.0 0.0 0.0 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1074 1111 1.097547 GGTAGCCGTAGTCCGTGCTA 61.098 60.000 0.00 0.0 36.13 3.49 R
1153 2611 1.207593 CGAAAGCACGGGAGCAAAG 59.792 57.895 0.00 0.0 36.85 2.77 R
1332 2793 2.051334 TGTACACTGGCTTGTGCTTT 57.949 45.000 10.25 0.0 41.30 3.51 R
2050 3586 2.975489 CCCAGCCACTAGACTCCATTAT 59.025 50.000 0.00 0.0 0.00 1.28 R
2214 3764 4.924625 ACACACAGACTACCATCTCTAGT 58.075 43.478 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.685139 AGACGAATTCTGGCTCAAGAA 57.315 42.857 3.52 0.63 40.36 2.52
34 35 4.008074 AGACGAATTCTGGCTCAAGAAA 57.992 40.909 3.52 0.00 39.54 2.52
35 36 3.999663 AGACGAATTCTGGCTCAAGAAAG 59.000 43.478 3.52 1.05 39.54 2.62
36 37 3.077359 ACGAATTCTGGCTCAAGAAAGG 58.923 45.455 3.52 0.00 39.54 3.11
37 38 3.244561 ACGAATTCTGGCTCAAGAAAGGA 60.245 43.478 3.52 0.00 39.54 3.36
38 39 3.753272 CGAATTCTGGCTCAAGAAAGGAA 59.247 43.478 3.52 0.00 39.54 3.36
39 40 4.378874 CGAATTCTGGCTCAAGAAAGGAAC 60.379 45.833 3.52 0.00 39.54 3.62
40 41 3.576078 TTCTGGCTCAAGAAAGGAACA 57.424 42.857 0.00 0.00 33.25 3.18
41 42 3.795688 TCTGGCTCAAGAAAGGAACAT 57.204 42.857 0.00 0.00 0.00 2.71
42 43 4.104383 TCTGGCTCAAGAAAGGAACATT 57.896 40.909 0.00 0.00 0.00 2.71
43 44 5.241403 TCTGGCTCAAGAAAGGAACATTA 57.759 39.130 0.00 0.00 0.00 1.90
44 45 5.248640 TCTGGCTCAAGAAAGGAACATTAG 58.751 41.667 0.00 0.00 0.00 1.73
45 46 4.985538 TGGCTCAAGAAAGGAACATTAGT 58.014 39.130 0.00 0.00 0.00 2.24
46 47 5.003804 TGGCTCAAGAAAGGAACATTAGTC 58.996 41.667 0.00 0.00 0.00 2.59
47 48 5.221925 TGGCTCAAGAAAGGAACATTAGTCT 60.222 40.000 0.00 0.00 0.00 3.24
48 49 6.013725 TGGCTCAAGAAAGGAACATTAGTCTA 60.014 38.462 0.00 0.00 0.00 2.59
49 50 6.536941 GGCTCAAGAAAGGAACATTAGTCTAG 59.463 42.308 0.00 0.00 0.00 2.43
50 51 6.036626 GCTCAAGAAAGGAACATTAGTCTAGC 59.963 42.308 0.00 0.00 0.00 3.42
51 52 7.246171 TCAAGAAAGGAACATTAGTCTAGCT 57.754 36.000 0.00 0.00 0.00 3.32
52 53 8.362464 TCAAGAAAGGAACATTAGTCTAGCTA 57.638 34.615 0.00 0.00 0.00 3.32
53 54 8.812972 TCAAGAAAGGAACATTAGTCTAGCTAA 58.187 33.333 8.46 8.46 43.13 3.09
54 55 9.436957 CAAGAAAGGAACATTAGTCTAGCTAAA 57.563 33.333 9.65 0.00 42.35 1.85
64 65 9.984190 ACATTAGTCTAGCTAAAATTAGTAGGC 57.016 33.333 9.65 4.82 42.35 3.93
65 66 9.130312 CATTAGTCTAGCTAAAATTAGTAGGCG 57.870 37.037 9.65 0.00 42.35 5.52
66 67 5.530712 AGTCTAGCTAAAATTAGTAGGCGC 58.469 41.667 0.00 0.00 30.95 6.53
67 68 4.382160 GTCTAGCTAAAATTAGTAGGCGCG 59.618 45.833 0.00 0.00 33.32 6.86
68 69 1.865340 AGCTAAAATTAGTAGGCGCGC 59.135 47.619 25.94 25.94 33.32 6.86
69 70 1.396815 GCTAAAATTAGTAGGCGCGCG 60.397 52.381 28.44 28.44 33.32 6.86
70 71 2.121786 CTAAAATTAGTAGGCGCGCGA 58.878 47.619 37.18 10.54 0.00 5.87
71 72 1.361793 AAAATTAGTAGGCGCGCGAA 58.638 45.000 37.18 18.61 0.00 4.70
72 73 1.578583 AAATTAGTAGGCGCGCGAAT 58.421 45.000 37.18 23.22 0.00 3.34
73 74 0.859232 AATTAGTAGGCGCGCGAATG 59.141 50.000 37.18 4.39 0.00 2.67
74 75 0.249322 ATTAGTAGGCGCGCGAATGT 60.249 50.000 37.18 16.40 0.00 2.71
75 76 1.143373 TTAGTAGGCGCGCGAATGTG 61.143 55.000 37.18 2.99 0.00 3.21
76 77 2.947118 TAGTAGGCGCGCGAATGTGG 62.947 60.000 37.18 2.07 0.00 4.17
84 85 2.778679 GCGAATGTGGCGAGTCAC 59.221 61.111 0.20 0.20 38.09 3.67
89 90 2.842462 TGTGGCGAGTCACACCCT 60.842 61.111 6.41 0.00 42.05 4.34
90 91 2.426023 GTGGCGAGTCACACCCTT 59.574 61.111 2.62 0.00 37.57 3.95
91 92 1.961277 GTGGCGAGTCACACCCTTG 60.961 63.158 2.62 0.00 37.57 3.61
92 93 3.050275 GGCGAGTCACACCCTTGC 61.050 66.667 0.00 0.00 38.40 4.01
93 94 2.031163 GCGAGTCACACCCTTGCT 59.969 61.111 0.00 0.00 36.57 3.91
94 95 1.598130 GCGAGTCACACCCTTGCTT 60.598 57.895 0.00 0.00 36.57 3.91
95 96 1.845809 GCGAGTCACACCCTTGCTTG 61.846 60.000 0.00 0.00 36.57 4.01
96 97 0.532862 CGAGTCACACCCTTGCTTGT 60.533 55.000 0.00 0.00 0.00 3.16
97 98 1.270094 CGAGTCACACCCTTGCTTGTA 60.270 52.381 0.00 0.00 0.00 2.41
98 99 2.612972 CGAGTCACACCCTTGCTTGTAT 60.613 50.000 0.00 0.00 0.00 2.29
99 100 2.744202 GAGTCACACCCTTGCTTGTATG 59.256 50.000 0.00 0.00 0.00 2.39
100 101 1.812571 GTCACACCCTTGCTTGTATGG 59.187 52.381 0.00 0.00 0.00 2.74
101 102 1.176527 CACACCCTTGCTTGTATGGG 58.823 55.000 7.85 7.85 44.89 4.00
104 105 2.780595 CCCTTGCTTGTATGGGTCG 58.219 57.895 2.32 0.00 35.13 4.79
105 106 0.251916 CCCTTGCTTGTATGGGTCGA 59.748 55.000 2.32 0.00 35.13 4.20
106 107 1.134098 CCCTTGCTTGTATGGGTCGAT 60.134 52.381 0.00 0.00 35.13 3.59
107 108 2.213499 CCTTGCTTGTATGGGTCGATC 58.787 52.381 0.00 0.00 0.00 3.69
108 109 1.860950 CTTGCTTGTATGGGTCGATCG 59.139 52.381 9.36 9.36 0.00 3.69
109 110 0.529773 TGCTTGTATGGGTCGATCGC 60.530 55.000 11.09 5.58 0.00 4.58
110 111 0.529773 GCTTGTATGGGTCGATCGCA 60.530 55.000 11.09 2.94 42.92 5.10
111 112 1.934589 CTTGTATGGGTCGATCGCAA 58.065 50.000 11.09 6.08 42.08 4.85
112 113 1.593006 CTTGTATGGGTCGATCGCAAC 59.407 52.381 11.09 4.10 42.08 4.17
113 114 0.533032 TGTATGGGTCGATCGCAACA 59.467 50.000 11.09 9.02 42.08 3.33
114 115 1.209128 GTATGGGTCGATCGCAACAG 58.791 55.000 11.09 0.00 42.08 3.16
115 116 0.529773 TATGGGTCGATCGCAACAGC 60.530 55.000 11.09 2.40 42.08 4.40
136 137 3.985877 CAGCATGTTGGCTCCGAA 58.014 55.556 0.85 0.00 43.68 4.30
137 138 2.256391 CAGCATGTTGGCTCCGAAA 58.744 52.632 0.85 0.00 43.68 3.46
138 139 0.109597 CAGCATGTTGGCTCCGAAAC 60.110 55.000 0.85 0.00 43.68 2.78
139 140 0.250901 AGCATGTTGGCTCCGAAACT 60.251 50.000 0.00 0.00 41.05 2.66
140 141 0.169009 GCATGTTGGCTCCGAAACTC 59.831 55.000 0.00 0.00 0.00 3.01
141 142 0.804989 CATGTTGGCTCCGAAACTCC 59.195 55.000 0.00 0.00 0.00 3.85
142 143 0.322546 ATGTTGGCTCCGAAACTCCC 60.323 55.000 0.00 0.00 0.00 4.30
143 144 1.674651 GTTGGCTCCGAAACTCCCC 60.675 63.158 0.00 0.00 0.00 4.81
144 145 1.846124 TTGGCTCCGAAACTCCCCT 60.846 57.895 0.00 0.00 0.00 4.79
145 146 0.545787 TTGGCTCCGAAACTCCCCTA 60.546 55.000 0.00 0.00 0.00 3.53
146 147 0.326238 TGGCTCCGAAACTCCCCTAT 60.326 55.000 0.00 0.00 0.00 2.57
147 148 0.106894 GGCTCCGAAACTCCCCTATG 59.893 60.000 0.00 0.00 0.00 2.23
148 149 0.106894 GCTCCGAAACTCCCCTATGG 59.893 60.000 0.00 0.00 0.00 2.74
149 150 1.789523 CTCCGAAACTCCCCTATGGA 58.210 55.000 0.00 0.00 42.41 3.41
159 160 3.390175 TCCCCTATGGAGATAGCTAGC 57.610 52.381 6.62 6.62 38.61 3.42
160 161 2.654896 TCCCCTATGGAGATAGCTAGCA 59.345 50.000 18.83 3.19 38.61 3.49
161 162 3.273351 TCCCCTATGGAGATAGCTAGCAT 59.727 47.826 18.83 8.43 38.61 3.79
162 163 4.036518 CCCCTATGGAGATAGCTAGCATT 58.963 47.826 18.83 2.87 35.39 3.56
163 164 4.141756 CCCCTATGGAGATAGCTAGCATTG 60.142 50.000 18.83 0.59 35.39 2.82
164 165 4.469227 CCCTATGGAGATAGCTAGCATTGT 59.531 45.833 18.83 1.41 31.52 2.71
165 166 5.046014 CCCTATGGAGATAGCTAGCATTGTT 60.046 44.000 18.83 0.00 31.52 2.83
166 167 5.873712 CCTATGGAGATAGCTAGCATTGTTG 59.126 44.000 18.83 0.00 31.52 3.33
167 168 5.557576 ATGGAGATAGCTAGCATTGTTGA 57.442 39.130 18.83 0.00 0.00 3.18
168 169 5.557576 TGGAGATAGCTAGCATTGTTGAT 57.442 39.130 18.83 0.00 0.00 2.57
169 170 5.933617 TGGAGATAGCTAGCATTGTTGATT 58.066 37.500 18.83 0.00 0.00 2.57
170 171 5.994054 TGGAGATAGCTAGCATTGTTGATTC 59.006 40.000 18.83 0.00 0.00 2.52
171 172 6.183361 TGGAGATAGCTAGCATTGTTGATTCT 60.183 38.462 18.83 4.97 0.00 2.40
172 173 6.147492 GGAGATAGCTAGCATTGTTGATTCTG 59.853 42.308 18.83 0.00 0.00 3.02
173 174 6.824553 AGATAGCTAGCATTGTTGATTCTGA 58.175 36.000 18.83 0.00 0.00 3.27
174 175 7.278135 AGATAGCTAGCATTGTTGATTCTGAA 58.722 34.615 18.83 0.00 0.00 3.02
175 176 7.937942 AGATAGCTAGCATTGTTGATTCTGAAT 59.062 33.333 18.83 1.81 0.00 2.57
176 177 6.132791 AGCTAGCATTGTTGATTCTGAATG 57.867 37.500 18.83 0.00 0.00 2.67
177 178 5.651139 AGCTAGCATTGTTGATTCTGAATGT 59.349 36.000 18.83 0.00 0.00 2.71
178 179 6.825213 AGCTAGCATTGTTGATTCTGAATGTA 59.175 34.615 18.83 0.00 0.00 2.29
179 180 7.337689 AGCTAGCATTGTTGATTCTGAATGTAA 59.662 33.333 18.83 0.39 0.00 2.41
180 181 8.133627 GCTAGCATTGTTGATTCTGAATGTAAT 58.866 33.333 10.63 0.81 0.00 1.89
181 182 9.661187 CTAGCATTGTTGATTCTGAATGTAATC 57.339 33.333 7.78 0.00 33.57 1.75
182 183 8.058667 AGCATTGTTGATTCTGAATGTAATCA 57.941 30.769 7.78 0.00 39.66 2.57
183 184 8.692710 AGCATTGTTGATTCTGAATGTAATCAT 58.307 29.630 7.78 0.00 40.71 2.45
184 185 8.965172 GCATTGTTGATTCTGAATGTAATCATC 58.035 33.333 7.78 0.52 40.71 2.92
188 189 8.626526 TGTTGATTCTGAATGTAATCATCATGG 58.373 33.333 7.78 0.00 40.71 3.66
189 190 8.627403 GTTGATTCTGAATGTAATCATCATGGT 58.373 33.333 7.78 0.00 40.71 3.55
190 191 8.756486 TGATTCTGAATGTAATCATCATGGTT 57.244 30.769 7.78 0.00 37.23 3.67
191 192 8.626526 TGATTCTGAATGTAATCATCATGGTTG 58.373 33.333 7.78 0.00 37.23 3.77
192 193 8.756486 ATTCTGAATGTAATCATCATGGTTGA 57.244 30.769 1.31 0.00 36.00 3.18
193 194 8.756486 TTCTGAATGTAATCATCATGGTTGAT 57.244 30.769 0.00 6.32 43.51 2.57
194 195 8.756486 TCTGAATGTAATCATCATGGTTGATT 57.244 30.769 20.98 20.98 40.70 2.57
195 196 9.850198 TCTGAATGTAATCATCATGGTTGATTA 57.150 29.630 19.54 19.54 40.70 1.75
206 207 9.246670 TCATCATGGTTGATTAATGAAAGTTCT 57.753 29.630 0.00 0.00 40.70 3.01
207 208 9.865321 CATCATGGTTGATTAATGAAAGTTCTT 57.135 29.630 0.00 0.00 40.70 2.52
211 212 9.710900 ATGGTTGATTAATGAAAGTTCTTTTCC 57.289 29.630 0.00 0.00 43.72 3.13
212 213 8.147704 TGGTTGATTAATGAAAGTTCTTTTCCC 58.852 33.333 0.00 0.00 43.72 3.97
213 214 7.328493 GGTTGATTAATGAAAGTTCTTTTCCCG 59.672 37.037 0.00 0.00 43.72 5.14
214 215 6.386654 TGATTAATGAAAGTTCTTTTCCCGC 58.613 36.000 0.00 0.00 43.72 6.13
215 216 5.776173 TTAATGAAAGTTCTTTTCCCGCA 57.224 34.783 0.00 0.00 43.72 5.69
216 217 4.664150 AATGAAAGTTCTTTTCCCGCAA 57.336 36.364 0.00 0.00 43.72 4.85
217 218 4.664150 ATGAAAGTTCTTTTCCCGCAAA 57.336 36.364 0.00 0.00 43.72 3.68
218 219 4.457834 TGAAAGTTCTTTTCCCGCAAAA 57.542 36.364 0.00 0.00 43.72 2.44
219 220 4.822026 TGAAAGTTCTTTTCCCGCAAAAA 58.178 34.783 0.00 0.00 43.72 1.94
271 272 6.607004 TTTTTGGTAAAAACAGAGGTGGAA 57.393 33.333 0.00 0.00 35.57 3.53
272 273 6.607004 TTTTGGTAAAAACAGAGGTGGAAA 57.393 33.333 0.00 0.00 30.24 3.13
273 274 6.800072 TTTGGTAAAAACAGAGGTGGAAAT 57.200 33.333 0.00 0.00 0.00 2.17
274 275 6.800072 TTGGTAAAAACAGAGGTGGAAATT 57.200 33.333 0.00 0.00 0.00 1.82
275 276 6.800072 TGGTAAAAACAGAGGTGGAAATTT 57.200 33.333 0.00 0.00 0.00 1.82
276 277 6.811954 TGGTAAAAACAGAGGTGGAAATTTC 58.188 36.000 9.83 9.83 0.00 2.17
277 278 6.609616 TGGTAAAAACAGAGGTGGAAATTTCT 59.390 34.615 17.42 0.00 0.00 2.52
278 279 6.923508 GGTAAAAACAGAGGTGGAAATTTCTG 59.076 38.462 17.42 9.27 42.07 3.02
284 285 7.654022 ACAGAGGTGGAAATTTCTGTTTTAA 57.346 32.000 17.42 0.00 45.80 1.52
285 286 8.250143 ACAGAGGTGGAAATTTCTGTTTTAAT 57.750 30.769 17.42 0.00 45.80 1.40
286 287 9.362151 ACAGAGGTGGAAATTTCTGTTTTAATA 57.638 29.630 17.42 0.00 45.80 0.98
291 292 9.083080 GGTGGAAATTTCTGTTTTAATAATCCG 57.917 33.333 17.42 0.00 0.00 4.18
292 293 9.634163 GTGGAAATTTCTGTTTTAATAATCCGT 57.366 29.630 17.42 0.00 0.00 4.69
293 294 9.632807 TGGAAATTTCTGTTTTAATAATCCGTG 57.367 29.630 17.42 0.00 0.00 4.94
294 295 9.849166 GGAAATTTCTGTTTTAATAATCCGTGA 57.151 29.630 17.42 0.00 0.00 4.35
297 298 9.840427 AATTTCTGTTTTAATAATCCGTGACAG 57.160 29.630 0.00 0.00 35.73 3.51
298 299 8.610248 TTTCTGTTTTAATAATCCGTGACAGA 57.390 30.769 0.00 0.00 40.10 3.41
299 300 8.610248 TTCTGTTTTAATAATCCGTGACAGAA 57.390 30.769 10.50 10.50 45.33 3.02
300 301 8.251750 TCTGTTTTAATAATCCGTGACAGAAG 57.748 34.615 0.00 0.00 39.23 2.85
301 302 6.837992 TGTTTTAATAATCCGTGACAGAAGC 58.162 36.000 0.00 0.00 0.00 3.86
302 303 5.712217 TTTAATAATCCGTGACAGAAGCG 57.288 39.130 0.00 0.00 0.00 4.68
303 304 3.520290 AATAATCCGTGACAGAAGCGA 57.480 42.857 0.00 0.00 0.00 4.93
304 305 3.520290 ATAATCCGTGACAGAAGCGAA 57.480 42.857 0.00 0.00 0.00 4.70
305 306 1.714794 AATCCGTGACAGAAGCGAAG 58.285 50.000 0.00 0.00 0.00 3.79
306 307 0.108615 ATCCGTGACAGAAGCGAAGG 60.109 55.000 0.00 0.00 0.00 3.46
307 308 1.176619 TCCGTGACAGAAGCGAAGGA 61.177 55.000 0.00 0.00 0.00 3.36
308 309 0.319555 CCGTGACAGAAGCGAAGGAA 60.320 55.000 0.00 0.00 0.00 3.36
309 310 1.063806 CGTGACAGAAGCGAAGGAAG 58.936 55.000 0.00 0.00 0.00 3.46
310 311 1.433534 GTGACAGAAGCGAAGGAAGG 58.566 55.000 0.00 0.00 0.00 3.46
311 312 0.320771 TGACAGAAGCGAAGGAAGGC 60.321 55.000 0.00 0.00 0.00 4.35
312 313 0.320771 GACAGAAGCGAAGGAAGGCA 60.321 55.000 0.00 0.00 0.00 4.75
313 314 0.326264 ACAGAAGCGAAGGAAGGCAT 59.674 50.000 0.00 0.00 0.00 4.40
314 315 0.731417 CAGAAGCGAAGGAAGGCATG 59.269 55.000 0.00 0.00 0.00 4.06
315 316 0.615331 AGAAGCGAAGGAAGGCATGA 59.385 50.000 0.00 0.00 0.00 3.07
316 317 1.012841 GAAGCGAAGGAAGGCATGAG 58.987 55.000 0.00 0.00 0.00 2.90
317 318 0.326264 AAGCGAAGGAAGGCATGAGT 59.674 50.000 0.00 0.00 0.00 3.41
318 319 0.392193 AGCGAAGGAAGGCATGAGTG 60.392 55.000 0.00 0.00 0.00 3.51
319 320 0.674895 GCGAAGGAAGGCATGAGTGT 60.675 55.000 0.00 0.00 0.00 3.55
320 321 1.813513 CGAAGGAAGGCATGAGTGTT 58.186 50.000 0.00 0.00 0.00 3.32
321 322 2.154462 CGAAGGAAGGCATGAGTGTTT 58.846 47.619 0.00 0.00 0.00 2.83
322 323 2.554032 CGAAGGAAGGCATGAGTGTTTT 59.446 45.455 0.00 0.00 0.00 2.43
323 324 3.004734 CGAAGGAAGGCATGAGTGTTTTT 59.995 43.478 0.00 0.00 0.00 1.94
324 325 4.215399 CGAAGGAAGGCATGAGTGTTTTTA 59.785 41.667 0.00 0.00 0.00 1.52
325 326 5.453567 AAGGAAGGCATGAGTGTTTTTAC 57.546 39.130 0.00 0.00 0.00 2.01
326 327 4.729868 AGGAAGGCATGAGTGTTTTTACT 58.270 39.130 0.00 0.00 0.00 2.24
327 328 4.520492 AGGAAGGCATGAGTGTTTTTACTG 59.480 41.667 0.00 0.00 0.00 2.74
331 332 4.460382 AGGCATGAGTGTTTTTACTGGATG 59.540 41.667 0.00 0.00 0.00 3.51
338 339 8.099364 TGAGTGTTTTTACTGGATGATCTTTC 57.901 34.615 0.00 0.00 0.00 2.62
370 373 1.459450 AATTCCCCAAACGGTGATCG 58.541 50.000 0.00 0.00 45.88 3.69
412 417 4.104696 GCTGCGAGGCCTTAAAATAAAA 57.895 40.909 6.77 0.00 0.00 1.52
413 418 4.105486 GCTGCGAGGCCTTAAAATAAAAG 58.895 43.478 6.77 0.00 0.00 2.27
423 428 7.047271 GGCCTTAAAATAAAAGCCAATCATCA 58.953 34.615 0.00 0.00 0.00 3.07
424 429 7.716560 GGCCTTAAAATAAAAGCCAATCATCAT 59.283 33.333 0.00 0.00 0.00 2.45
425 430 9.762933 GCCTTAAAATAAAAGCCAATCATCATA 57.237 29.630 0.00 0.00 0.00 2.15
456 461 4.684484 AACCCTAACTAAATCTAGGCCG 57.316 45.455 0.00 0.00 34.44 6.13
457 462 2.367894 ACCCTAACTAAATCTAGGCCGC 59.632 50.000 0.00 0.00 34.44 6.53
458 463 2.367567 CCCTAACTAAATCTAGGCCGCA 59.632 50.000 0.00 0.00 34.44 5.69
459 464 3.391049 CCTAACTAAATCTAGGCCGCAC 58.609 50.000 0.00 0.00 0.00 5.34
460 465 3.181469 CCTAACTAAATCTAGGCCGCACA 60.181 47.826 0.00 0.00 0.00 4.57
461 466 2.311124 ACTAAATCTAGGCCGCACAC 57.689 50.000 0.00 0.00 0.00 3.82
462 467 1.553248 ACTAAATCTAGGCCGCACACA 59.447 47.619 0.00 0.00 0.00 3.72
463 468 1.933853 CTAAATCTAGGCCGCACACAC 59.066 52.381 0.00 0.00 0.00 3.82
464 469 0.676782 AAATCTAGGCCGCACACACC 60.677 55.000 0.00 0.00 0.00 4.16
465 470 2.852495 AATCTAGGCCGCACACACCG 62.852 60.000 0.00 0.00 0.00 4.94
562 580 2.932614 CAGCTAATCGGTTCCAACTCTG 59.067 50.000 0.00 0.00 0.00 3.35
584 606 5.933617 TGAAGCCTATTGTTCATATGAGCT 58.066 37.500 18.83 13.01 0.00 4.09
585 607 5.761726 TGAAGCCTATTGTTCATATGAGCTG 59.238 40.000 18.83 7.87 0.00 4.24
586 608 5.301835 AGCCTATTGTTCATATGAGCTGT 57.698 39.130 18.83 10.66 0.00 4.40
587 609 5.688807 AGCCTATTGTTCATATGAGCTGTT 58.311 37.500 18.83 7.63 0.00 3.16
588 610 6.125029 AGCCTATTGTTCATATGAGCTGTTT 58.875 36.000 18.83 5.55 0.00 2.83
589 611 6.039047 AGCCTATTGTTCATATGAGCTGTTTG 59.961 38.462 18.83 7.57 0.00 2.93
590 612 6.183360 GCCTATTGTTCATATGAGCTGTTTGT 60.183 38.462 18.83 3.59 0.00 2.83
591 613 7.412853 CCTATTGTTCATATGAGCTGTTTGTC 58.587 38.462 18.83 0.00 0.00 3.18
592 614 7.281774 CCTATTGTTCATATGAGCTGTTTGTCT 59.718 37.037 18.83 0.48 0.00 3.41
593 615 9.317936 CTATTGTTCATATGAGCTGTTTGTCTA 57.682 33.333 18.83 0.00 0.00 2.59
594 616 6.968131 TGTTCATATGAGCTGTTTGTCTAC 57.032 37.500 18.83 5.21 0.00 2.59
595 617 6.701340 TGTTCATATGAGCTGTTTGTCTACT 58.299 36.000 18.83 0.00 0.00 2.57
596 618 7.836842 TGTTCATATGAGCTGTTTGTCTACTA 58.163 34.615 18.83 0.00 0.00 1.82
597 619 7.759886 TGTTCATATGAGCTGTTTGTCTACTAC 59.240 37.037 18.83 4.06 0.00 2.73
598 620 7.646548 TCATATGAGCTGTTTGTCTACTACT 57.353 36.000 0.00 0.00 0.00 2.57
599 621 7.708051 TCATATGAGCTGTTTGTCTACTACTC 58.292 38.462 0.00 0.00 0.00 2.59
600 622 4.785511 TGAGCTGTTTGTCTACTACTCC 57.214 45.455 0.00 0.00 0.00 3.85
601 623 3.510360 TGAGCTGTTTGTCTACTACTCCC 59.490 47.826 0.00 0.00 0.00 4.30
602 624 3.764972 GAGCTGTTTGTCTACTACTCCCT 59.235 47.826 0.00 0.00 0.00 4.20
603 625 3.764972 AGCTGTTTGTCTACTACTCCCTC 59.235 47.826 0.00 0.00 0.00 4.30
604 626 3.119065 GCTGTTTGTCTACTACTCCCTCC 60.119 52.174 0.00 0.00 0.00 4.30
605 627 3.087031 TGTTTGTCTACTACTCCCTCCG 58.913 50.000 0.00 0.00 0.00 4.63
606 628 3.087781 GTTTGTCTACTACTCCCTCCGT 58.912 50.000 0.00 0.00 0.00 4.69
607 629 3.446442 TTGTCTACTACTCCCTCCGTT 57.554 47.619 0.00 0.00 0.00 4.44
608 630 2.996631 TGTCTACTACTCCCTCCGTTC 58.003 52.381 0.00 0.00 0.00 3.95
609 631 2.296792 GTCTACTACTCCCTCCGTTCC 58.703 57.143 0.00 0.00 0.00 3.62
610 632 1.918262 TCTACTACTCCCTCCGTTCCA 59.082 52.381 0.00 0.00 0.00 3.53
611 633 2.309755 TCTACTACTCCCTCCGTTCCAA 59.690 50.000 0.00 0.00 0.00 3.53
612 634 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
613 635 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
614 636 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
615 637 4.098894 ACTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
616 638 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
617 639 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
618 640 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
619 641 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
620 642 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
621 643 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
622 644 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
623 645 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
624 646 1.990563 CGTTCCAAATTACTCGTCGCT 59.009 47.619 0.00 0.00 0.00 4.93
625 647 2.222508 CGTTCCAAATTACTCGTCGCTG 60.223 50.000 0.00 0.00 0.00 5.18
626 648 2.991190 GTTCCAAATTACTCGTCGCTGA 59.009 45.455 0.00 0.00 0.00 4.26
627 649 3.306917 TCCAAATTACTCGTCGCTGAA 57.693 42.857 0.00 0.00 0.00 3.02
628 650 3.655486 TCCAAATTACTCGTCGCTGAAA 58.345 40.909 0.00 0.00 0.00 2.69
629 651 4.250464 TCCAAATTACTCGTCGCTGAAAT 58.750 39.130 0.00 0.00 0.00 2.17
630 652 5.412640 TCCAAATTACTCGTCGCTGAAATA 58.587 37.500 0.00 0.00 0.00 1.40
631 653 5.518847 TCCAAATTACTCGTCGCTGAAATAG 59.481 40.000 0.00 0.00 0.00 1.73
632 654 5.518847 CCAAATTACTCGTCGCTGAAATAGA 59.481 40.000 0.00 0.00 0.00 1.98
633 655 6.201044 CCAAATTACTCGTCGCTGAAATAGAT 59.799 38.462 0.00 0.00 0.00 1.98
634 656 6.755461 AATTACTCGTCGCTGAAATAGATG 57.245 37.500 0.00 0.00 0.00 2.90
635 657 3.784701 ACTCGTCGCTGAAATAGATGT 57.215 42.857 0.00 0.00 0.00 3.06
636 658 4.895224 ACTCGTCGCTGAAATAGATGTA 57.105 40.909 0.00 0.00 0.00 2.29
637 659 5.440234 ACTCGTCGCTGAAATAGATGTAT 57.560 39.130 0.00 0.00 0.00 2.29
638 660 5.453648 ACTCGTCGCTGAAATAGATGTATC 58.546 41.667 0.00 0.00 0.00 2.24
639 661 5.239744 ACTCGTCGCTGAAATAGATGTATCT 59.760 40.000 0.00 0.00 40.86 1.98
640 662 6.427242 ACTCGTCGCTGAAATAGATGTATCTA 59.573 38.462 4.22 4.22 43.00 1.98
641 663 6.832804 TCGTCGCTGAAATAGATGTATCTAG 58.167 40.000 7.57 0.00 42.20 2.43
642 664 6.649557 TCGTCGCTGAAATAGATGTATCTAGA 59.350 38.462 7.57 0.00 42.20 2.43
643 665 7.172703 TCGTCGCTGAAATAGATGTATCTAGAA 59.827 37.037 0.00 0.00 42.20 2.10
644 666 7.965655 CGTCGCTGAAATAGATGTATCTAGAAT 59.034 37.037 0.00 0.00 42.20 2.40
645 667 9.632807 GTCGCTGAAATAGATGTATCTAGAATT 57.367 33.333 0.00 3.41 42.20 2.17
675 697 7.601073 ACATCTAAATACATCCATACATGCG 57.399 36.000 0.00 0.00 0.00 4.73
676 698 7.386059 ACATCTAAATACATCCATACATGCGA 58.614 34.615 0.00 0.00 0.00 5.10
677 699 7.331934 ACATCTAAATACATCCATACATGCGAC 59.668 37.037 0.00 0.00 0.00 5.19
678 700 6.754193 TCTAAATACATCCATACATGCGACA 58.246 36.000 0.00 0.00 0.00 4.35
679 701 7.213678 TCTAAATACATCCATACATGCGACAA 58.786 34.615 0.00 0.00 0.00 3.18
680 702 5.929697 AATACATCCATACATGCGACAAG 57.070 39.130 0.00 0.00 0.00 3.16
681 703 3.266510 ACATCCATACATGCGACAAGT 57.733 42.857 0.00 0.00 0.00 3.16
682 704 4.400529 ACATCCATACATGCGACAAGTA 57.599 40.909 0.00 0.00 0.00 2.24
683 705 4.765273 ACATCCATACATGCGACAAGTAA 58.235 39.130 0.00 0.00 0.00 2.24
684 706 5.368145 ACATCCATACATGCGACAAGTAAT 58.632 37.500 0.00 0.00 0.00 1.89
685 707 5.822519 ACATCCATACATGCGACAAGTAATT 59.177 36.000 0.00 0.00 0.00 1.40
686 708 5.984233 TCCATACATGCGACAAGTAATTC 57.016 39.130 0.00 0.00 0.00 2.17
687 709 4.506288 TCCATACATGCGACAAGTAATTCG 59.494 41.667 0.00 0.00 38.31 3.34
688 710 4.318760 CCATACATGCGACAAGTAATTCGG 60.319 45.833 0.00 0.00 35.73 4.30
689 711 2.967362 ACATGCGACAAGTAATTCGGA 58.033 42.857 0.00 0.00 40.02 4.55
690 712 3.331150 ACATGCGACAAGTAATTCGGAA 58.669 40.909 0.00 0.00 39.13 4.30
691 713 3.124636 ACATGCGACAAGTAATTCGGAAC 59.875 43.478 0.00 0.00 39.13 3.62
707 729 2.391678 GGAACGGAGGGAGTAATACCA 58.608 52.381 0.00 0.00 0.00 3.25
708 730 2.102084 GGAACGGAGGGAGTAATACCAC 59.898 54.545 0.00 0.00 0.00 4.16
709 731 2.842645 ACGGAGGGAGTAATACCACT 57.157 50.000 0.00 0.00 0.00 4.00
754 782 3.543680 TCTGTAGCCTAAGCAACATCC 57.456 47.619 0.00 0.00 43.56 3.51
772 800 1.019673 CCTGGAGCATGTTTGGATCG 58.980 55.000 0.00 0.00 0.00 3.69
774 802 1.031571 TGGAGCATGTTTGGATCGCC 61.032 55.000 0.00 0.00 0.00 5.54
828 856 5.007385 AGATTTGAGCTCATGCAAATTCC 57.993 39.130 19.04 3.61 42.81 3.01
885 916 2.096496 GCGACTGAATTAGCAGCACAAT 59.904 45.455 0.00 0.00 39.51 2.71
891 922 7.485913 CGACTGAATTAGCAGCACAATTATTTT 59.514 33.333 0.00 0.00 39.51 1.82
892 923 8.693542 ACTGAATTAGCAGCACAATTATTTTC 57.306 30.769 0.00 0.00 39.51 2.29
894 925 8.915871 TGAATTAGCAGCACAATTATTTTCTC 57.084 30.769 0.00 0.00 0.00 2.87
895 926 8.522003 TGAATTAGCAGCACAATTATTTTCTCA 58.478 29.630 0.00 0.00 0.00 3.27
896 927 9.525409 GAATTAGCAGCACAATTATTTTCTCAT 57.475 29.630 0.00 0.00 0.00 2.90
899 930 7.166691 AGCAGCACAATTATTTTCTCATCTT 57.833 32.000 0.00 0.00 0.00 2.40
900 931 7.033791 AGCAGCACAATTATTTTCTCATCTTG 58.966 34.615 0.00 0.00 0.00 3.02
901 932 6.255020 GCAGCACAATTATTTTCTCATCTTGG 59.745 38.462 0.00 0.00 0.00 3.61
902 933 6.755141 CAGCACAATTATTTTCTCATCTTGGG 59.245 38.462 0.00 0.00 0.00 4.12
903 934 6.044682 GCACAATTATTTTCTCATCTTGGGG 58.955 40.000 0.00 0.00 0.00 4.96
904 935 6.044682 CACAATTATTTTCTCATCTTGGGGC 58.955 40.000 0.00 0.00 0.00 5.80
905 936 5.721000 ACAATTATTTTCTCATCTTGGGGCA 59.279 36.000 0.00 0.00 0.00 5.36
906 937 6.213195 ACAATTATTTTCTCATCTTGGGGCAA 59.787 34.615 0.00 0.00 0.00 4.52
907 938 6.872585 ATTATTTTCTCATCTTGGGGCAAA 57.127 33.333 0.00 0.00 0.00 3.68
908 939 6.872585 TTATTTTCTCATCTTGGGGCAAAT 57.127 33.333 0.00 0.00 0.00 2.32
909 940 5.767277 ATTTTCTCATCTTGGGGCAAATT 57.233 34.783 0.00 0.00 0.00 1.82
910 941 4.540359 TTTCTCATCTTGGGGCAAATTG 57.460 40.909 0.00 0.00 0.00 2.32
911 942 3.173953 TCTCATCTTGGGGCAAATTGT 57.826 42.857 0.00 0.00 0.00 2.71
912 943 2.827322 TCTCATCTTGGGGCAAATTGTG 59.173 45.455 0.00 0.00 0.00 3.33
946 977 3.046390 GCCTTGATCGTATCGTCTCTTG 58.954 50.000 0.00 0.00 0.00 3.02
955 986 4.504097 TCGTATCGTCTCTTGCATGAATTG 59.496 41.667 0.00 0.00 0.00 2.32
1055 1092 3.036429 GCGACCTGAGCCCTTCCAT 62.036 63.158 0.00 0.00 0.00 3.41
1074 1111 2.048503 GCCTACGCCGTTGACACT 60.049 61.111 0.00 0.00 0.00 3.55
1269 2727 6.647229 TCTGCATGTCTCAGTTCTTGATAAT 58.353 36.000 0.00 0.00 34.68 1.28
1287 2748 8.908786 TTGATAATGATGAGGATTACCAGAAC 57.091 34.615 0.00 0.00 38.94 3.01
1332 2793 3.138304 CAGTTTCATCGACCAGGTTGAA 58.862 45.455 14.03 7.35 29.05 2.69
1513 2995 2.696707 ACCAATGATGATGATGCCAACC 59.303 45.455 0.00 0.00 0.00 3.77
2050 3586 0.249953 TCCCTCGCGTTTGCTAACAA 60.250 50.000 5.77 0.00 39.65 2.83
2166 3709 8.041323 CAGAAGTAACACTTTGGATATGGTACT 58.959 37.037 0.00 0.00 46.40 2.73
2214 3764 6.069994 TGCTCTTATGCATATTTGGAATCCA 58.930 36.000 7.36 0.00 38.12 3.41
2397 4007 5.781210 TTTATCTGTGCATTTGTTGTCCA 57.219 34.783 0.00 0.00 0.00 4.02
2406 4016 8.341892 TGTGCATTTGTTGTCCAGTATATTAA 57.658 30.769 0.00 0.00 0.00 1.40
2409 4019 8.965819 TGCATTTGTTGTCCAGTATATTAATGT 58.034 29.630 0.00 0.00 0.00 2.71
2437 4047 3.118038 GCCTTCCCTGTCATGTATAACCA 60.118 47.826 0.00 0.00 0.00 3.67
2440 4050 6.129179 CCTTCCCTGTCATGTATAACCATTT 58.871 40.000 0.00 0.00 0.00 2.32
2441 4051 6.607198 CCTTCCCTGTCATGTATAACCATTTT 59.393 38.462 0.00 0.00 0.00 1.82
2445 4055 8.210946 TCCCTGTCATGTATAACCATTTTCTAG 58.789 37.037 0.00 0.00 0.00 2.43
2476 4086 6.571605 TGCAATGTTGATGTTTTCAGAAAGA 58.428 32.000 0.00 0.00 35.27 2.52
2480 4090 8.871862 CAATGTTGATGTTTTCAGAAAGACAAA 58.128 29.630 12.17 4.36 35.27 2.83
2576 4187 4.650972 TTAAGTACCCAGCAACCTTCAT 57.349 40.909 0.00 0.00 0.00 2.57
2598 4209 1.003580 TGGGTGCTTGATGTTCTCCTC 59.996 52.381 0.00 0.00 0.00 3.71
2599 4210 1.003580 GGGTGCTTGATGTTCTCCTCA 59.996 52.381 0.00 0.00 0.00 3.86
2607 4218 4.727507 TGATGTTCTCCTCAGTTAGAGC 57.272 45.455 0.00 0.00 43.31 4.09
2680 4291 6.638610 AGAGATGACTTTCATTCTGGTGTAG 58.361 40.000 0.00 0.00 37.20 2.74
2681 4292 6.212388 AGAGATGACTTTCATTCTGGTGTAGT 59.788 38.462 0.00 0.00 37.20 2.73
2682 4293 7.397476 AGAGATGACTTTCATTCTGGTGTAGTA 59.603 37.037 0.00 0.00 37.20 1.82
2683 4294 8.083828 AGATGACTTTCATTCTGGTGTAGTAT 57.916 34.615 0.00 0.00 37.20 2.12
2684 4295 8.543774 AGATGACTTTCATTCTGGTGTAGTATT 58.456 33.333 0.00 0.00 37.20 1.89
2748 4360 1.804396 TTGAGTGCACAATTGGGCCG 61.804 55.000 29.13 6.17 45.73 6.13
2863 4478 4.443034 GGTCGAATTACTTGGAGGTATGCT 60.443 45.833 0.00 0.00 0.00 3.79
2867 4482 3.627395 TTACTTGGAGGTATGCTGGTG 57.373 47.619 0.00 0.00 0.00 4.17
2907 4522 7.290061 TGCAATTAATTGATCCTACCTAGCTT 58.710 34.615 28.33 0.00 40.14 3.74
2978 4595 6.014242 TCCAGATTACGGCTTATGATGATCTT 60.014 38.462 0.00 0.00 0.00 2.40
2979 4596 6.091849 CCAGATTACGGCTTATGATGATCTTG 59.908 42.308 0.00 0.00 0.00 3.02
2980 4597 5.641209 AGATTACGGCTTATGATGATCTTGC 59.359 40.000 0.00 0.00 0.00 4.01
2981 4598 3.482156 ACGGCTTATGATGATCTTGCT 57.518 42.857 0.00 0.00 0.00 3.91
2982 4599 3.136763 ACGGCTTATGATGATCTTGCTG 58.863 45.455 0.00 1.08 0.00 4.41
2983 4600 3.181462 ACGGCTTATGATGATCTTGCTGA 60.181 43.478 12.39 0.00 0.00 4.26
2984 4601 4.001652 CGGCTTATGATGATCTTGCTGAT 58.998 43.478 0.00 0.00 38.27 2.90
2985 4602 4.142881 CGGCTTATGATGATCTTGCTGATG 60.143 45.833 0.00 0.00 35.14 3.07
2986 4603 5.001874 GGCTTATGATGATCTTGCTGATGA 58.998 41.667 0.00 0.00 35.14 2.92
2987 4604 5.648526 GGCTTATGATGATCTTGCTGATGAT 59.351 40.000 0.00 0.00 35.14 2.45
2988 4605 6.183360 GGCTTATGATGATCTTGCTGATGATC 60.183 42.308 10.79 10.79 43.24 2.92
2989 4606 6.596106 GCTTATGATGATCTTGCTGATGATCT 59.404 38.462 15.76 8.09 43.30 2.75
2993 4610 2.697229 TGATCTTGCTGATGATCTCGGT 59.303 45.455 0.00 0.00 39.63 4.69
3009 4626 3.072476 TCTCGGTTGATTCTTGTTCCCTT 59.928 43.478 0.00 0.00 0.00 3.95
3042 4659 9.760660 GTGTCTGAAATAAGTGTTTGTATGATC 57.239 33.333 0.00 0.00 0.00 2.92
3127 4744 2.220363 GTGTCTGCGCATATCAGTGATG 59.780 50.000 12.24 2.44 33.48 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.685139 TTCTTGAGCCAGAATTCGTCT 57.315 42.857 0.00 0.00 36.88 4.18
14 15 3.126000 CCTTTCTTGAGCCAGAATTCGTC 59.874 47.826 0.00 0.00 32.69 4.20
15 16 3.077359 CCTTTCTTGAGCCAGAATTCGT 58.923 45.455 0.00 0.00 32.69 3.85
16 17 3.338249 TCCTTTCTTGAGCCAGAATTCG 58.662 45.455 0.00 0.00 32.69 3.34
17 18 4.520492 TGTTCCTTTCTTGAGCCAGAATTC 59.480 41.667 0.00 0.00 32.69 2.17
18 19 4.473444 TGTTCCTTTCTTGAGCCAGAATT 58.527 39.130 0.00 0.00 32.69 2.17
19 20 4.104383 TGTTCCTTTCTTGAGCCAGAAT 57.896 40.909 0.00 0.00 32.69 2.40
20 21 3.576078 TGTTCCTTTCTTGAGCCAGAA 57.424 42.857 0.00 0.00 0.00 3.02
21 22 3.795688 ATGTTCCTTTCTTGAGCCAGA 57.204 42.857 0.00 0.00 0.00 3.86
22 23 5.006386 ACTAATGTTCCTTTCTTGAGCCAG 58.994 41.667 0.00 0.00 0.00 4.85
23 24 4.985538 ACTAATGTTCCTTTCTTGAGCCA 58.014 39.130 0.00 0.00 0.00 4.75
24 25 5.249420 AGACTAATGTTCCTTTCTTGAGCC 58.751 41.667 0.00 0.00 0.00 4.70
25 26 6.036626 GCTAGACTAATGTTCCTTTCTTGAGC 59.963 42.308 0.00 0.00 0.00 4.26
26 27 7.327214 AGCTAGACTAATGTTCCTTTCTTGAG 58.673 38.462 0.00 0.00 0.00 3.02
27 28 7.246171 AGCTAGACTAATGTTCCTTTCTTGA 57.754 36.000 0.00 0.00 0.00 3.02
28 29 9.436957 TTTAGCTAGACTAATGTTCCTTTCTTG 57.563 33.333 0.00 0.00 40.55 3.02
38 39 9.984190 GCCTACTAATTTTAGCTAGACTAATGT 57.016 33.333 0.00 0.00 40.55 2.71
39 40 9.130312 CGCCTACTAATTTTAGCTAGACTAATG 57.870 37.037 0.00 0.00 40.55 1.90
40 41 7.813627 GCGCCTACTAATTTTAGCTAGACTAAT 59.186 37.037 0.00 0.00 40.55 1.73
41 42 7.144000 GCGCCTACTAATTTTAGCTAGACTAA 58.856 38.462 0.00 0.00 39.14 2.24
42 43 6.567321 CGCGCCTACTAATTTTAGCTAGACTA 60.567 42.308 0.00 0.00 34.09 2.59
43 44 5.530712 GCGCCTACTAATTTTAGCTAGACT 58.469 41.667 0.00 0.00 34.09 3.24
44 45 4.382160 CGCGCCTACTAATTTTAGCTAGAC 59.618 45.833 0.00 0.00 34.09 2.59
45 46 4.543692 CGCGCCTACTAATTTTAGCTAGA 58.456 43.478 0.00 0.00 34.09 2.43
46 47 3.121445 GCGCGCCTACTAATTTTAGCTAG 59.879 47.826 23.24 0.00 34.09 3.42
47 48 3.054878 GCGCGCCTACTAATTTTAGCTA 58.945 45.455 23.24 0.00 34.09 3.32
48 49 1.865340 GCGCGCCTACTAATTTTAGCT 59.135 47.619 23.24 0.00 34.09 3.32
49 50 1.396815 CGCGCGCCTACTAATTTTAGC 60.397 52.381 27.72 0.00 34.09 3.09
50 51 2.121786 TCGCGCGCCTACTAATTTTAG 58.878 47.619 27.95 6.47 36.82 1.85
51 52 2.206815 TCGCGCGCCTACTAATTTTA 57.793 45.000 27.95 0.00 0.00 1.52
52 53 1.361793 TTCGCGCGCCTACTAATTTT 58.638 45.000 27.95 0.00 0.00 1.82
53 54 1.260561 CATTCGCGCGCCTACTAATTT 59.739 47.619 27.95 0.00 0.00 1.82
54 55 0.859232 CATTCGCGCGCCTACTAATT 59.141 50.000 27.95 0.00 0.00 1.40
55 56 0.249322 ACATTCGCGCGCCTACTAAT 60.249 50.000 27.95 15.82 0.00 1.73
56 57 1.140161 ACATTCGCGCGCCTACTAA 59.860 52.632 27.95 13.94 0.00 2.24
57 58 1.587876 CACATTCGCGCGCCTACTA 60.588 57.895 27.95 2.97 0.00 1.82
58 59 2.885644 CACATTCGCGCGCCTACT 60.886 61.111 27.95 5.20 0.00 2.57
59 60 3.925238 CCACATTCGCGCGCCTAC 61.925 66.667 27.95 0.00 0.00 3.18
67 68 2.027073 TGTGACTCGCCACATTCGC 61.027 57.895 0.00 0.00 41.63 4.70
68 69 4.260194 TGTGACTCGCCACATTCG 57.740 55.556 0.00 0.00 41.63 3.34
75 76 3.050275 GCAAGGGTGTGACTCGCC 61.050 66.667 0.00 0.00 45.27 5.54
76 77 1.598130 AAGCAAGGGTGTGACTCGC 60.598 57.895 0.00 0.00 0.00 5.03
77 78 0.532862 ACAAGCAAGGGTGTGACTCG 60.533 55.000 0.00 0.00 0.00 4.18
78 79 2.543777 TACAAGCAAGGGTGTGACTC 57.456 50.000 0.00 0.00 0.00 3.36
79 80 2.553028 CCATACAAGCAAGGGTGTGACT 60.553 50.000 0.00 0.00 0.00 3.41
80 81 1.812571 CCATACAAGCAAGGGTGTGAC 59.187 52.381 0.00 0.00 0.00 3.67
81 82 1.271871 CCCATACAAGCAAGGGTGTGA 60.272 52.381 0.00 0.00 36.52 3.58
82 83 1.176527 CCCATACAAGCAAGGGTGTG 58.823 55.000 0.00 0.00 36.52 3.82
83 84 3.670105 CCCATACAAGCAAGGGTGT 57.330 52.632 0.00 0.00 36.52 4.16
86 87 0.251916 TCGACCCATACAAGCAAGGG 59.748 55.000 0.00 0.00 46.96 3.95
87 88 2.213499 GATCGACCCATACAAGCAAGG 58.787 52.381 0.00 0.00 0.00 3.61
88 89 1.860950 CGATCGACCCATACAAGCAAG 59.139 52.381 10.26 0.00 0.00 4.01
89 90 1.934589 CGATCGACCCATACAAGCAA 58.065 50.000 10.26 0.00 0.00 3.91
90 91 0.529773 GCGATCGACCCATACAAGCA 60.530 55.000 21.57 0.00 0.00 3.91
91 92 0.529773 TGCGATCGACCCATACAAGC 60.530 55.000 21.57 0.00 0.00 4.01
92 93 1.593006 GTTGCGATCGACCCATACAAG 59.407 52.381 21.57 0.00 0.00 3.16
93 94 1.066787 TGTTGCGATCGACCCATACAA 60.067 47.619 21.57 8.65 0.00 2.41
94 95 0.533032 TGTTGCGATCGACCCATACA 59.467 50.000 21.57 11.14 0.00 2.29
95 96 1.209128 CTGTTGCGATCGACCCATAC 58.791 55.000 21.57 8.92 0.00 2.39
96 97 0.529773 GCTGTTGCGATCGACCCATA 60.530 55.000 21.57 0.00 0.00 2.74
97 98 1.815421 GCTGTTGCGATCGACCCAT 60.815 57.895 21.57 0.00 0.00 4.00
98 99 2.434185 GCTGTTGCGATCGACCCA 60.434 61.111 21.57 9.94 0.00 4.51
108 109 2.803670 CATGCTGTGCGCTGTTGC 60.804 61.111 9.73 8.61 40.11 4.17
109 110 1.008194 AACATGCTGTGCGCTGTTG 60.008 52.632 9.73 6.81 38.03 3.33
110 111 1.008194 CAACATGCTGTGCGCTGTT 60.008 52.632 9.73 6.81 39.14 3.16
111 112 2.640989 CAACATGCTGTGCGCTGT 59.359 55.556 9.73 0.00 40.11 4.40
112 113 2.126618 CCAACATGCTGTGCGCTG 60.127 61.111 9.73 0.00 40.11 5.18
113 114 4.047059 GCCAACATGCTGTGCGCT 62.047 61.111 9.73 0.00 40.11 5.92
114 115 3.958822 GAGCCAACATGCTGTGCGC 62.959 63.158 0.00 0.00 42.95 6.09
115 116 2.177531 GAGCCAACATGCTGTGCG 59.822 61.111 0.00 0.00 42.95 5.34
116 117 2.570181 GGAGCCAACATGCTGTGC 59.430 61.111 0.00 0.00 42.95 4.57
117 118 1.236616 TTCGGAGCCAACATGCTGTG 61.237 55.000 0.00 0.00 42.95 3.66
118 119 0.537143 TTTCGGAGCCAACATGCTGT 60.537 50.000 0.00 0.00 42.95 4.40
119 120 0.109597 GTTTCGGAGCCAACATGCTG 60.110 55.000 0.00 0.00 42.95 4.41
120 121 0.250901 AGTTTCGGAGCCAACATGCT 60.251 50.000 0.00 0.00 46.37 3.79
121 122 0.169009 GAGTTTCGGAGCCAACATGC 59.831 55.000 0.00 0.00 0.00 4.06
122 123 0.804989 GGAGTTTCGGAGCCAACATG 59.195 55.000 0.00 0.00 0.00 3.21
123 124 0.322546 GGGAGTTTCGGAGCCAACAT 60.323 55.000 0.00 0.00 0.00 2.71
124 125 1.072505 GGGAGTTTCGGAGCCAACA 59.927 57.895 0.00 0.00 0.00 3.33
125 126 1.674651 GGGGAGTTTCGGAGCCAAC 60.675 63.158 0.00 0.00 0.00 3.77
126 127 0.545787 TAGGGGAGTTTCGGAGCCAA 60.546 55.000 0.00 0.00 0.00 4.52
127 128 0.326238 ATAGGGGAGTTTCGGAGCCA 60.326 55.000 0.00 0.00 0.00 4.75
128 129 0.106894 CATAGGGGAGTTTCGGAGCC 59.893 60.000 0.00 0.00 0.00 4.70
129 130 0.106894 CCATAGGGGAGTTTCGGAGC 59.893 60.000 0.00 0.00 40.01 4.70
130 131 1.789523 TCCATAGGGGAGTTTCGGAG 58.210 55.000 0.00 0.00 42.15 4.63
139 140 2.654896 TGCTAGCTATCTCCATAGGGGA 59.345 50.000 17.23 0.00 45.89 4.81
140 141 3.107402 TGCTAGCTATCTCCATAGGGG 57.893 52.381 17.23 0.00 33.61 4.79
141 142 4.469227 ACAATGCTAGCTATCTCCATAGGG 59.531 45.833 17.23 0.00 33.61 3.53
142 143 5.674052 ACAATGCTAGCTATCTCCATAGG 57.326 43.478 17.23 0.00 33.61 2.57
143 144 6.695429 TCAACAATGCTAGCTATCTCCATAG 58.305 40.000 17.23 0.00 35.86 2.23
144 145 6.670695 TCAACAATGCTAGCTATCTCCATA 57.329 37.500 17.23 0.00 0.00 2.74
145 146 5.557576 TCAACAATGCTAGCTATCTCCAT 57.442 39.130 17.23 0.00 0.00 3.41
146 147 5.557576 ATCAACAATGCTAGCTATCTCCA 57.442 39.130 17.23 0.00 0.00 3.86
147 148 6.147492 CAGAATCAACAATGCTAGCTATCTCC 59.853 42.308 17.23 0.00 0.00 3.71
148 149 6.927936 TCAGAATCAACAATGCTAGCTATCTC 59.072 38.462 17.23 0.75 0.00 2.75
149 150 6.824553 TCAGAATCAACAATGCTAGCTATCT 58.175 36.000 17.23 3.57 0.00 1.98
150 151 7.488187 TTCAGAATCAACAATGCTAGCTATC 57.512 36.000 17.23 0.00 0.00 2.08
151 152 7.501559 ACATTCAGAATCAACAATGCTAGCTAT 59.498 33.333 17.23 5.06 30.63 2.97
152 153 6.825213 ACATTCAGAATCAACAATGCTAGCTA 59.175 34.615 17.23 2.58 30.63 3.32
153 154 5.651139 ACATTCAGAATCAACAATGCTAGCT 59.349 36.000 17.23 0.00 30.63 3.32
154 155 5.888105 ACATTCAGAATCAACAATGCTAGC 58.112 37.500 8.10 8.10 30.63 3.42
155 156 9.661187 GATTACATTCAGAATCAACAATGCTAG 57.339 33.333 0.00 0.00 33.16 3.42
156 157 9.176460 TGATTACATTCAGAATCAACAATGCTA 57.824 29.630 0.00 0.00 38.73 3.49
157 158 8.058667 TGATTACATTCAGAATCAACAATGCT 57.941 30.769 0.00 0.00 38.73 3.79
158 159 8.867112 ATGATTACATTCAGAATCAACAATGC 57.133 30.769 1.76 0.00 43.39 3.56
162 163 8.626526 CCATGATGATTACATTCAGAATCAACA 58.373 33.333 9.16 9.16 44.12 3.33
163 164 8.627403 ACCATGATGATTACATTCAGAATCAAC 58.373 33.333 0.00 0.63 43.39 3.18
164 165 8.756486 ACCATGATGATTACATTCAGAATCAA 57.244 30.769 0.00 0.00 43.39 2.57
165 166 8.626526 CAACCATGATGATTACATTCAGAATCA 58.373 33.333 0.00 0.19 44.07 2.57
166 167 8.843262 TCAACCATGATGATTACATTCAGAATC 58.157 33.333 0.00 0.00 36.82 2.52
167 168 8.756486 TCAACCATGATGATTACATTCAGAAT 57.244 30.769 0.00 0.00 36.82 2.40
168 169 8.756486 ATCAACCATGATGATTACATTCAGAA 57.244 30.769 7.82 0.00 44.63 3.02
169 170 8.756486 AATCAACCATGATGATTACATTCAGA 57.244 30.769 19.13 0.00 45.60 3.27
180 181 9.246670 AGAACTTTCATTAATCAACCATGATGA 57.753 29.630 0.00 0.00 45.60 2.92
181 182 9.865321 AAGAACTTTCATTAATCAACCATGATG 57.135 29.630 0.00 0.00 45.60 3.07
185 186 9.710900 GGAAAAGAACTTTCATTAATCAACCAT 57.289 29.630 0.21 0.00 44.61 3.55
186 187 8.147704 GGGAAAAGAACTTTCATTAATCAACCA 58.852 33.333 0.21 0.00 44.61 3.67
187 188 7.328493 CGGGAAAAGAACTTTCATTAATCAACC 59.672 37.037 0.21 0.00 44.61 3.77
188 189 7.148804 GCGGGAAAAGAACTTTCATTAATCAAC 60.149 37.037 0.21 0.00 44.61 3.18
189 190 6.866248 GCGGGAAAAGAACTTTCATTAATCAA 59.134 34.615 0.21 0.00 44.61 2.57
190 191 6.015856 TGCGGGAAAAGAACTTTCATTAATCA 60.016 34.615 0.21 0.00 44.61 2.57
191 192 6.386654 TGCGGGAAAAGAACTTTCATTAATC 58.613 36.000 0.21 0.00 44.61 1.75
192 193 6.339587 TGCGGGAAAAGAACTTTCATTAAT 57.660 33.333 0.21 0.00 44.61 1.40
193 194 5.776173 TGCGGGAAAAGAACTTTCATTAA 57.224 34.783 0.21 0.00 44.61 1.40
194 195 5.776173 TTGCGGGAAAAGAACTTTCATTA 57.224 34.783 0.21 0.00 44.61 1.90
195 196 4.664150 TTGCGGGAAAAGAACTTTCATT 57.336 36.364 0.21 0.00 44.61 2.57
196 197 4.664150 TTTGCGGGAAAAGAACTTTCAT 57.336 36.364 0.21 0.00 44.61 2.57
197 198 4.457834 TTTTGCGGGAAAAGAACTTTCA 57.542 36.364 3.11 0.00 44.61 2.69
248 249 6.607004 TTCCACCTCTGTTTTTACCAAAAA 57.393 33.333 0.00 0.00 37.99 1.94
249 250 6.607004 TTTCCACCTCTGTTTTTACCAAAA 57.393 33.333 0.00 0.00 0.00 2.44
250 251 6.800072 ATTTCCACCTCTGTTTTTACCAAA 57.200 33.333 0.00 0.00 0.00 3.28
251 252 6.800072 AATTTCCACCTCTGTTTTTACCAA 57.200 33.333 0.00 0.00 0.00 3.67
252 253 6.609616 AGAAATTTCCACCTCTGTTTTTACCA 59.390 34.615 14.61 0.00 0.00 3.25
253 254 6.923508 CAGAAATTTCCACCTCTGTTTTTACC 59.076 38.462 14.61 0.00 32.38 2.85
254 255 7.489160 ACAGAAATTTCCACCTCTGTTTTTAC 58.511 34.615 14.61 0.00 44.71 2.01
255 256 7.654022 ACAGAAATTTCCACCTCTGTTTTTA 57.346 32.000 14.61 0.00 44.71 1.52
256 257 6.544928 ACAGAAATTTCCACCTCTGTTTTT 57.455 33.333 14.61 0.00 44.71 1.94
265 266 9.083080 CGGATTATTAAAACAGAAATTTCCACC 57.917 33.333 14.61 0.00 0.00 4.61
266 267 9.634163 ACGGATTATTAAAACAGAAATTTCCAC 57.366 29.630 14.61 0.00 0.00 4.02
267 268 9.632807 CACGGATTATTAAAACAGAAATTTCCA 57.367 29.630 14.61 0.00 0.00 3.53
268 269 9.849166 TCACGGATTATTAAAACAGAAATTTCC 57.151 29.630 14.61 0.00 0.00 3.13
271 272 9.840427 CTGTCACGGATTATTAAAACAGAAATT 57.160 29.630 0.00 0.00 35.95 1.82
272 273 9.226606 TCTGTCACGGATTATTAAAACAGAAAT 57.773 29.630 0.00 0.00 39.00 2.17
273 274 8.610248 TCTGTCACGGATTATTAAAACAGAAA 57.390 30.769 0.00 0.00 39.00 2.52
274 275 8.610248 TTCTGTCACGGATTATTAAAACAGAA 57.390 30.769 9.77 9.77 45.27 3.02
275 276 7.148474 GCTTCTGTCACGGATTATTAAAACAGA 60.148 37.037 0.00 0.00 39.88 3.41
276 277 6.961554 GCTTCTGTCACGGATTATTAAAACAG 59.038 38.462 0.00 0.00 35.38 3.16
277 278 6.401688 CGCTTCTGTCACGGATTATTAAAACA 60.402 38.462 0.00 0.00 0.00 2.83
278 279 5.957796 CGCTTCTGTCACGGATTATTAAAAC 59.042 40.000 0.00 0.00 0.00 2.43
279 280 5.870433 TCGCTTCTGTCACGGATTATTAAAA 59.130 36.000 0.00 0.00 0.00 1.52
280 281 5.412640 TCGCTTCTGTCACGGATTATTAAA 58.587 37.500 0.00 0.00 0.00 1.52
281 282 5.001237 TCGCTTCTGTCACGGATTATTAA 57.999 39.130 0.00 0.00 0.00 1.40
282 283 4.642445 TCGCTTCTGTCACGGATTATTA 57.358 40.909 0.00 0.00 0.00 0.98
283 284 3.520290 TCGCTTCTGTCACGGATTATT 57.480 42.857 0.00 0.00 0.00 1.40
284 285 3.448686 CTTCGCTTCTGTCACGGATTAT 58.551 45.455 0.00 0.00 0.00 1.28
285 286 2.416836 CCTTCGCTTCTGTCACGGATTA 60.417 50.000 0.00 0.00 0.00 1.75
286 287 1.673033 CCTTCGCTTCTGTCACGGATT 60.673 52.381 0.00 0.00 0.00 3.01
287 288 0.108615 CCTTCGCTTCTGTCACGGAT 60.109 55.000 0.00 0.00 0.00 4.18
288 289 1.176619 TCCTTCGCTTCTGTCACGGA 61.177 55.000 0.00 0.00 0.00 4.69
289 290 0.319555 TTCCTTCGCTTCTGTCACGG 60.320 55.000 0.00 0.00 0.00 4.94
290 291 1.063806 CTTCCTTCGCTTCTGTCACG 58.936 55.000 0.00 0.00 0.00 4.35
291 292 1.433534 CCTTCCTTCGCTTCTGTCAC 58.566 55.000 0.00 0.00 0.00 3.67
292 293 0.320771 GCCTTCCTTCGCTTCTGTCA 60.321 55.000 0.00 0.00 0.00 3.58
293 294 0.320771 TGCCTTCCTTCGCTTCTGTC 60.321 55.000 0.00 0.00 0.00 3.51
294 295 0.326264 ATGCCTTCCTTCGCTTCTGT 59.674 50.000 0.00 0.00 0.00 3.41
295 296 0.731417 CATGCCTTCCTTCGCTTCTG 59.269 55.000 0.00 0.00 0.00 3.02
296 297 0.615331 TCATGCCTTCCTTCGCTTCT 59.385 50.000 0.00 0.00 0.00 2.85
297 298 1.012841 CTCATGCCTTCCTTCGCTTC 58.987 55.000 0.00 0.00 0.00 3.86
298 299 0.326264 ACTCATGCCTTCCTTCGCTT 59.674 50.000 0.00 0.00 0.00 4.68
299 300 0.392193 CACTCATGCCTTCCTTCGCT 60.392 55.000 0.00 0.00 0.00 4.93
300 301 0.674895 ACACTCATGCCTTCCTTCGC 60.675 55.000 0.00 0.00 0.00 4.70
301 302 1.813513 AACACTCATGCCTTCCTTCG 58.186 50.000 0.00 0.00 0.00 3.79
302 303 4.590850 AAAAACACTCATGCCTTCCTTC 57.409 40.909 0.00 0.00 0.00 3.46
303 304 5.010012 CAGTAAAAACACTCATGCCTTCCTT 59.990 40.000 0.00 0.00 0.00 3.36
304 305 4.520492 CAGTAAAAACACTCATGCCTTCCT 59.480 41.667 0.00 0.00 0.00 3.36
305 306 4.321230 CCAGTAAAAACACTCATGCCTTCC 60.321 45.833 0.00 0.00 0.00 3.46
306 307 4.518970 TCCAGTAAAAACACTCATGCCTTC 59.481 41.667 0.00 0.00 0.00 3.46
307 308 4.469657 TCCAGTAAAAACACTCATGCCTT 58.530 39.130 0.00 0.00 0.00 4.35
308 309 4.098914 TCCAGTAAAAACACTCATGCCT 57.901 40.909 0.00 0.00 0.00 4.75
309 310 4.458989 TCATCCAGTAAAAACACTCATGCC 59.541 41.667 0.00 0.00 0.00 4.40
310 311 5.627499 TCATCCAGTAAAAACACTCATGC 57.373 39.130 0.00 0.00 0.00 4.06
311 312 7.621428 AGATCATCCAGTAAAAACACTCATG 57.379 36.000 0.00 0.00 0.00 3.07
312 313 8.641498 AAAGATCATCCAGTAAAAACACTCAT 57.359 30.769 0.00 0.00 0.00 2.90
313 314 7.939039 AGAAAGATCATCCAGTAAAAACACTCA 59.061 33.333 0.00 0.00 0.00 3.41
314 315 8.233190 CAGAAAGATCATCCAGTAAAAACACTC 58.767 37.037 0.00 0.00 0.00 3.51
315 316 7.308830 GCAGAAAGATCATCCAGTAAAAACACT 60.309 37.037 0.00 0.00 0.00 3.55
316 317 6.803807 GCAGAAAGATCATCCAGTAAAAACAC 59.196 38.462 0.00 0.00 0.00 3.32
317 318 6.071952 GGCAGAAAGATCATCCAGTAAAAACA 60.072 38.462 0.00 0.00 0.00 2.83
318 319 6.151817 AGGCAGAAAGATCATCCAGTAAAAAC 59.848 38.462 0.00 0.00 0.00 2.43
319 320 6.248433 AGGCAGAAAGATCATCCAGTAAAAA 58.752 36.000 0.00 0.00 0.00 1.94
320 321 5.819991 AGGCAGAAAGATCATCCAGTAAAA 58.180 37.500 0.00 0.00 0.00 1.52
321 322 5.431765 GAGGCAGAAAGATCATCCAGTAAA 58.568 41.667 0.00 0.00 0.00 2.01
322 323 4.442052 CGAGGCAGAAAGATCATCCAGTAA 60.442 45.833 0.00 0.00 0.00 2.24
323 324 3.068732 CGAGGCAGAAAGATCATCCAGTA 59.931 47.826 0.00 0.00 0.00 2.74
324 325 2.158986 CGAGGCAGAAAGATCATCCAGT 60.159 50.000 0.00 0.00 0.00 4.00
325 326 2.158986 ACGAGGCAGAAAGATCATCCAG 60.159 50.000 0.00 0.00 0.00 3.86
326 327 1.833630 ACGAGGCAGAAAGATCATCCA 59.166 47.619 0.00 0.00 0.00 3.41
327 328 2.208431 CACGAGGCAGAAAGATCATCC 58.792 52.381 0.00 0.00 0.00 3.51
331 332 0.391661 TGGCACGAGGCAGAAAGATC 60.392 55.000 4.68 0.00 46.46 2.75
562 580 5.762218 ACAGCTCATATGAACAATAGGCTTC 59.238 40.000 6.90 0.00 0.00 3.86
584 606 3.087031 CGGAGGGAGTAGTAGACAAACA 58.913 50.000 0.00 0.00 0.00 2.83
585 607 3.087781 ACGGAGGGAGTAGTAGACAAAC 58.912 50.000 0.00 0.00 0.00 2.93
586 608 3.446442 ACGGAGGGAGTAGTAGACAAA 57.554 47.619 0.00 0.00 0.00 2.83
587 609 3.350833 GAACGGAGGGAGTAGTAGACAA 58.649 50.000 0.00 0.00 0.00 3.18
588 610 2.356535 GGAACGGAGGGAGTAGTAGACA 60.357 54.545 0.00 0.00 0.00 3.41
589 611 2.296792 GGAACGGAGGGAGTAGTAGAC 58.703 57.143 0.00 0.00 0.00 2.59
590 612 1.918262 TGGAACGGAGGGAGTAGTAGA 59.082 52.381 0.00 0.00 0.00 2.59
591 613 2.431954 TGGAACGGAGGGAGTAGTAG 57.568 55.000 0.00 0.00 0.00 2.57
592 614 2.905415 TTGGAACGGAGGGAGTAGTA 57.095 50.000 0.00 0.00 0.00 1.82
593 615 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
594 616 3.629142 AATTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
595 617 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
596 618 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
597 619 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
598 620 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
599 621 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
600 622 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
601 623 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
602 624 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
603 625 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
604 626 1.990563 AGCGACGAGTAATTTGGAACG 59.009 47.619 0.00 0.00 0.00 3.95
605 627 2.991190 TCAGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
606 628 3.306917 TCAGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
607 629 3.306917 TTCAGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
608 630 4.600012 ATTTCAGCGACGAGTAATTTGG 57.400 40.909 0.00 0.00 0.00 3.28
609 631 6.569228 TCTATTTCAGCGACGAGTAATTTG 57.431 37.500 0.00 0.00 0.00 2.32
610 632 6.757010 ACATCTATTTCAGCGACGAGTAATTT 59.243 34.615 0.00 0.00 0.00 1.82
611 633 6.273825 ACATCTATTTCAGCGACGAGTAATT 58.726 36.000 0.00 0.00 0.00 1.40
612 634 5.833082 ACATCTATTTCAGCGACGAGTAAT 58.167 37.500 0.00 0.00 0.00 1.89
613 635 5.244785 ACATCTATTTCAGCGACGAGTAA 57.755 39.130 0.00 0.00 0.00 2.24
614 636 4.895224 ACATCTATTTCAGCGACGAGTA 57.105 40.909 0.00 0.00 0.00 2.59
615 637 3.784701 ACATCTATTTCAGCGACGAGT 57.215 42.857 0.00 0.00 0.00 4.18
616 638 5.694816 AGATACATCTATTTCAGCGACGAG 58.305 41.667 0.00 0.00 34.85 4.18
617 639 5.690997 AGATACATCTATTTCAGCGACGA 57.309 39.130 0.00 0.00 34.85 4.20
618 640 6.832804 TCTAGATACATCTATTTCAGCGACG 58.167 40.000 0.00 0.00 38.60 5.12
619 641 9.632807 AATTCTAGATACATCTATTTCAGCGAC 57.367 33.333 0.00 0.00 38.60 5.19
649 671 9.317936 CGCATGTATGGATGTATTTAGATGTAT 57.682 33.333 0.00 0.00 0.00 2.29
650 672 8.527810 TCGCATGTATGGATGTATTTAGATGTA 58.472 33.333 0.00 0.00 0.00 2.29
651 673 7.331934 GTCGCATGTATGGATGTATTTAGATGT 59.668 37.037 0.00 0.00 0.00 3.06
652 674 7.331687 TGTCGCATGTATGGATGTATTTAGATG 59.668 37.037 0.00 0.00 0.00 2.90
653 675 7.386059 TGTCGCATGTATGGATGTATTTAGAT 58.614 34.615 0.00 0.00 0.00 1.98
654 676 6.754193 TGTCGCATGTATGGATGTATTTAGA 58.246 36.000 0.00 0.00 0.00 2.10
655 677 7.171508 ACTTGTCGCATGTATGGATGTATTTAG 59.828 37.037 0.00 0.00 0.00 1.85
656 678 6.989759 ACTTGTCGCATGTATGGATGTATTTA 59.010 34.615 0.00 0.00 0.00 1.40
657 679 5.822519 ACTTGTCGCATGTATGGATGTATTT 59.177 36.000 0.00 0.00 0.00 1.40
658 680 5.368145 ACTTGTCGCATGTATGGATGTATT 58.632 37.500 0.00 0.00 0.00 1.89
659 681 4.960938 ACTTGTCGCATGTATGGATGTAT 58.039 39.130 0.00 0.00 0.00 2.29
660 682 4.400529 ACTTGTCGCATGTATGGATGTA 57.599 40.909 0.00 0.00 0.00 2.29
661 683 3.266510 ACTTGTCGCATGTATGGATGT 57.733 42.857 0.00 0.00 0.00 3.06
662 684 5.929697 ATTACTTGTCGCATGTATGGATG 57.070 39.130 0.00 0.00 0.00 3.51
663 685 5.177511 CGAATTACTTGTCGCATGTATGGAT 59.822 40.000 0.00 0.00 0.00 3.41
664 686 4.506288 CGAATTACTTGTCGCATGTATGGA 59.494 41.667 0.00 0.00 0.00 3.41
665 687 4.318760 CCGAATTACTTGTCGCATGTATGG 60.319 45.833 0.00 4.42 35.93 2.74
666 688 4.506288 TCCGAATTACTTGTCGCATGTATG 59.494 41.667 0.00 0.00 35.93 2.39
667 689 4.689071 TCCGAATTACTTGTCGCATGTAT 58.311 39.130 0.00 0.00 35.93 2.29
668 690 4.112716 TCCGAATTACTTGTCGCATGTA 57.887 40.909 0.00 2.87 35.93 2.29
669 691 2.967362 TCCGAATTACTTGTCGCATGT 58.033 42.857 0.00 4.39 35.93 3.21
670 692 3.670203 GTTCCGAATTACTTGTCGCATG 58.330 45.455 0.00 0.00 35.93 4.06
671 693 2.347452 CGTTCCGAATTACTTGTCGCAT 59.653 45.455 0.00 0.00 35.93 4.73
672 694 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
673 695 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
674 696 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
675 697 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
676 698 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
677 699 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
678 700 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
679 701 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
680 702 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
681 703 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
682 704 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
683 705 1.856629 TTACTCCCTCCGTTCCGAAT 58.143 50.000 0.00 0.00 0.00 3.34
684 706 1.856629 ATTACTCCCTCCGTTCCGAA 58.143 50.000 0.00 0.00 0.00 4.30
685 707 2.301346 GTATTACTCCCTCCGTTCCGA 58.699 52.381 0.00 0.00 0.00 4.55
686 708 1.339291 GGTATTACTCCCTCCGTTCCG 59.661 57.143 0.00 0.00 0.00 4.30
687 709 2.102084 GTGGTATTACTCCCTCCGTTCC 59.898 54.545 0.00 0.00 0.00 3.62
688 710 3.029570 AGTGGTATTACTCCCTCCGTTC 58.970 50.000 0.00 0.00 0.00 3.95
689 711 3.029570 GAGTGGTATTACTCCCTCCGTT 58.970 50.000 0.00 0.00 40.92 4.44
690 712 2.024655 TGAGTGGTATTACTCCCTCCGT 60.025 50.000 0.00 0.00 45.07 4.69
691 713 2.662866 TGAGTGGTATTACTCCCTCCG 58.337 52.381 0.00 0.00 45.07 4.63
692 714 4.484912 AGATGAGTGGTATTACTCCCTCC 58.515 47.826 0.00 0.00 45.07 4.30
693 715 5.221541 CCAAGATGAGTGGTATTACTCCCTC 60.222 48.000 0.00 0.00 45.07 4.30
694 716 4.656112 CCAAGATGAGTGGTATTACTCCCT 59.344 45.833 0.00 0.00 45.07 4.20
695 717 4.202367 CCCAAGATGAGTGGTATTACTCCC 60.202 50.000 0.00 0.00 45.07 4.30
696 718 4.202367 CCCCAAGATGAGTGGTATTACTCC 60.202 50.000 0.00 0.00 45.07 3.85
697 719 4.202367 CCCCCAAGATGAGTGGTATTACTC 60.202 50.000 0.00 0.00 45.71 2.59
698 720 3.716872 CCCCCAAGATGAGTGGTATTACT 59.283 47.826 0.00 0.00 34.01 2.24
699 721 3.714798 TCCCCCAAGATGAGTGGTATTAC 59.285 47.826 0.00 0.00 34.01 1.89
700 722 3.973973 CTCCCCCAAGATGAGTGGTATTA 59.026 47.826 0.00 0.00 34.01 0.98
701 723 2.780010 CTCCCCCAAGATGAGTGGTATT 59.220 50.000 0.00 0.00 34.01 1.89
702 724 2.022035 TCTCCCCCAAGATGAGTGGTAT 60.022 50.000 0.00 0.00 34.01 2.73
703 725 1.364678 TCTCCCCCAAGATGAGTGGTA 59.635 52.381 0.00 0.00 34.01 3.25
704 726 0.119155 TCTCCCCCAAGATGAGTGGT 59.881 55.000 0.00 0.00 34.01 4.16
705 727 0.543749 GTCTCCCCCAAGATGAGTGG 59.456 60.000 0.00 0.00 35.77 4.00
706 728 1.065854 GTGTCTCCCCCAAGATGAGTG 60.066 57.143 0.00 0.00 0.00 3.51
707 729 1.203364 AGTGTCTCCCCCAAGATGAGT 60.203 52.381 0.00 0.00 0.00 3.41
708 730 1.484240 GAGTGTCTCCCCCAAGATGAG 59.516 57.143 0.00 0.00 0.00 2.90
709 731 1.203300 TGAGTGTCTCCCCCAAGATGA 60.203 52.381 0.00 0.00 0.00 2.92
754 782 0.379669 GCGATCCAAACATGCTCCAG 59.620 55.000 0.00 0.00 0.00 3.86
885 916 6.872585 ATTTGCCCCAAGATGAGAAAATAA 57.127 33.333 0.00 0.00 0.00 1.40
891 922 2.827322 CACAATTTGCCCCAAGATGAGA 59.173 45.455 0.00 0.00 0.00 3.27
892 923 2.675889 GCACAATTTGCCCCAAGATGAG 60.676 50.000 0.00 0.00 46.63 2.90
894 925 1.729284 GCACAATTTGCCCCAAGATG 58.271 50.000 0.00 0.00 46.63 2.90
904 935 4.520078 GCAGAACAAACATGCACAATTTG 58.480 39.130 14.47 14.47 39.75 2.32
905 936 3.560896 GGCAGAACAAACATGCACAATTT 59.439 39.130 0.00 0.00 41.78 1.82
906 937 3.132925 GGCAGAACAAACATGCACAATT 58.867 40.909 0.00 0.00 41.78 2.32
907 938 2.366266 AGGCAGAACAAACATGCACAAT 59.634 40.909 0.00 0.00 41.78 2.71
908 939 1.755959 AGGCAGAACAAACATGCACAA 59.244 42.857 0.00 0.00 41.78 3.33
909 940 1.401761 AGGCAGAACAAACATGCACA 58.598 45.000 0.00 0.00 41.78 4.57
910 941 2.129607 CAAGGCAGAACAAACATGCAC 58.870 47.619 0.00 0.00 41.78 4.57
911 942 2.030371 TCAAGGCAGAACAAACATGCA 58.970 42.857 0.00 0.00 41.78 3.96
912 943 2.798976 TCAAGGCAGAACAAACATGC 57.201 45.000 0.00 0.00 39.25 4.06
913 944 3.058016 ACGATCAAGGCAGAACAAACATG 60.058 43.478 0.00 0.00 0.00 3.21
914 945 3.149196 ACGATCAAGGCAGAACAAACAT 58.851 40.909 0.00 0.00 0.00 2.71
915 946 2.571212 ACGATCAAGGCAGAACAAACA 58.429 42.857 0.00 0.00 0.00 2.83
916 947 4.492570 CGATACGATCAAGGCAGAACAAAC 60.493 45.833 0.00 0.00 0.00 2.93
965 996 2.653726 CCCATCGGAAATCACCATTGA 58.346 47.619 0.00 0.00 35.73 2.57
1074 1111 1.097547 GGTAGCCGTAGTCCGTGCTA 61.098 60.000 0.00 0.00 36.13 3.49
1153 2611 1.207593 CGAAAGCACGGGAGCAAAG 59.792 57.895 0.00 0.00 36.85 2.77
1269 2727 4.532126 ACAGTGTTCTGGTAATCCTCATCA 59.468 41.667 0.00 0.00 45.14 3.07
1287 2748 2.164219 ACACACCTTTGCTTTCACAGTG 59.836 45.455 0.00 0.00 0.00 3.66
1332 2793 2.051334 TGTACACTGGCTTGTGCTTT 57.949 45.000 10.25 0.00 41.30 3.51
1513 2995 4.680237 TGGGAGCACCTTGTCGCG 62.680 66.667 0.00 0.00 41.11 5.87
2050 3586 2.975489 CCCAGCCACTAGACTCCATTAT 59.025 50.000 0.00 0.00 0.00 1.28
2166 3709 7.658982 GCATCACTTCATATCTAAGGAACATGA 59.341 37.037 0.00 0.00 0.00 3.07
2214 3764 4.924625 ACACACAGACTACCATCTCTAGT 58.075 43.478 0.00 0.00 0.00 2.57
2263 3823 9.851686 TTGCATTTTCTGATCCAGTATATAAGT 57.148 29.630 0.00 0.00 32.61 2.24
2333 3943 7.545965 CGACTAGATAGGAAACTTGAACAATGT 59.454 37.037 0.00 0.00 43.67 2.71
2397 4007 7.839200 AGGGAAGGCACAAAACATTAATATACT 59.161 33.333 0.00 0.00 0.00 2.12
2406 4016 1.963515 GACAGGGAAGGCACAAAACAT 59.036 47.619 0.00 0.00 0.00 2.71
2409 4019 1.962807 CATGACAGGGAAGGCACAAAA 59.037 47.619 0.00 0.00 0.00 2.44
2440 4050 9.836864 AACATCAACATTGCATATCTACTAGAA 57.163 29.630 0.00 0.00 0.00 2.10
2441 4051 9.836864 AAACATCAACATTGCATATCTACTAGA 57.163 29.630 0.00 0.00 0.00 2.43
2445 4055 9.229784 CTGAAAACATCAACATTGCATATCTAC 57.770 33.333 0.00 0.00 37.67 2.59
2476 4086 6.127083 CCCCTAAATGCAGGTTCATAATTTGT 60.127 38.462 0.00 0.00 33.44 2.83
2480 4090 5.402054 TCCCCTAAATGCAGGTTCATAAT 57.598 39.130 0.00 0.00 33.44 1.28
2576 4187 1.545428 GGAGAACATCAAGCACCCACA 60.545 52.381 0.00 0.00 0.00 4.17
2598 4209 4.557496 GCAAAACCTTTGGAGCTCTAACTG 60.557 45.833 12.63 8.92 0.00 3.16
2599 4210 3.570125 GCAAAACCTTTGGAGCTCTAACT 59.430 43.478 12.63 0.00 0.00 2.24
2607 4218 3.118811 TGGACTTTGCAAAACCTTTGGAG 60.119 43.478 25.22 10.76 0.00 3.86
2684 4295 9.462174 CTAAATTGACAACATCTGTGCTAAAAA 57.538 29.630 0.00 0.00 38.84 1.94
2863 4478 3.009584 TGCATACCCATCACTTAACACCA 59.990 43.478 0.00 0.00 0.00 4.17
2867 4482 9.248291 CAATTAATTGCATACCCATCACTTAAC 57.752 33.333 14.96 0.00 0.00 2.01
2907 4522 4.635473 ACCCTGGAATATCAGAAAGGAGA 58.365 43.478 0.00 0.00 36.93 3.71
2978 4595 3.133542 AGAATCAACCGAGATCATCAGCA 59.866 43.478 0.00 0.00 0.00 4.41
2979 4596 3.726607 AGAATCAACCGAGATCATCAGC 58.273 45.455 0.00 0.00 0.00 4.26
2980 4597 5.114780 ACAAGAATCAACCGAGATCATCAG 58.885 41.667 0.00 0.00 0.00 2.90
2981 4598 5.089970 ACAAGAATCAACCGAGATCATCA 57.910 39.130 0.00 0.00 0.00 3.07
2982 4599 5.007136 GGAACAAGAATCAACCGAGATCATC 59.993 44.000 0.00 0.00 0.00 2.92
2983 4600 4.878397 GGAACAAGAATCAACCGAGATCAT 59.122 41.667 0.00 0.00 0.00 2.45
2984 4601 4.253685 GGAACAAGAATCAACCGAGATCA 58.746 43.478 0.00 0.00 0.00 2.92
2985 4602 3.623510 GGGAACAAGAATCAACCGAGATC 59.376 47.826 0.00 0.00 0.00 2.75
2986 4603 3.264450 AGGGAACAAGAATCAACCGAGAT 59.736 43.478 0.00 0.00 0.00 2.75
2987 4604 2.637872 AGGGAACAAGAATCAACCGAGA 59.362 45.455 0.00 0.00 0.00 4.04
2988 4605 3.059352 AGGGAACAAGAATCAACCGAG 57.941 47.619 0.00 0.00 0.00 4.63
2989 4606 3.072476 AGAAGGGAACAAGAATCAACCGA 59.928 43.478 0.00 0.00 0.00 4.69
2993 4610 4.722526 TGGAGAAGGGAACAAGAATCAA 57.277 40.909 0.00 0.00 0.00 2.57
3009 4626 6.174720 ACACTTATTTCAGACACTTGGAGA 57.825 37.500 0.00 0.00 0.00 3.71
3042 4659 0.026803 GAATAAGCGCGACAAGCTGG 59.973 55.000 12.10 0.00 45.31 4.85
3104 4721 1.591619 CACTGATATGCGCAGACACAG 59.408 52.381 27.49 27.49 36.86 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.