Multiple sequence alignment - TraesCS6B01G468700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G468700 chr6B 100.000 3418 0 0 1 3418 717931768 717928351 0.000000e+00 6312.0
1 TraesCS6B01G468700 chr6D 93.743 1726 78 15 1075 2797 472811535 472809837 0.000000e+00 2562.0
2 TraesCS6B01G468700 chr6D 94.086 558 24 3 2866 3418 472809837 472809284 0.000000e+00 839.0
3 TraesCS6B01G468700 chr6D 76.471 578 102 23 1151 1721 473114916 473114366 2.010000e-72 283.0
4 TraesCS6B01G468700 chr6D 84.170 259 21 7 1 241 472687940 472688196 2.050000e-57 233.0
5 TraesCS6B01G468700 chr6A 94.579 867 25 1 1538 2404 616965547 616966391 0.000000e+00 1321.0
6 TraesCS6B01G468700 chr6A 91.817 611 25 7 1 588 616942740 616943348 0.000000e+00 828.0
7 TraesCS6B01G468700 chr6A 74.706 1190 241 29 1150 2334 616885279 616884145 3.090000e-130 475.0
8 TraesCS6B01G468700 chr6A 88.718 390 33 5 598 987 616965121 616965499 1.860000e-127 466.0
9 TraesCS6B01G468700 chr6A 77.305 141 28 4 1125 1263 616892487 616892349 2.830000e-11 80.5
10 TraesCS6B01G468700 chr6A 97.561 41 1 0 2418 2458 616966379 616966419 1.700000e-08 71.3
11 TraesCS6B01G468700 chr7D 76.875 1120 217 27 1237 2337 602286852 602287948 2.270000e-166 595.0
12 TraesCS6B01G468700 chr7D 78.509 805 151 11 1570 2357 549834795 549835594 3.040000e-140 508.0
13 TraesCS6B01G468700 chr7B 79.209 784 149 6 1562 2335 594119188 594119967 1.810000e-147 532.0
14 TraesCS6B01G468700 chr7B 74.439 1248 268 34 1141 2353 594121837 594123068 1.100000e-134 490.0
15 TraesCS6B01G468700 chr7A 75.512 1123 227 24 1237 2335 635273799 635274897 1.090000e-139 507.0
16 TraesCS6B01G468700 chr5D 76.982 908 183 19 1435 2335 423535014 423534126 2.370000e-136 496.0
17 TraesCS6B01G468700 chr5B 74.217 1245 274 33 1110 2335 511372916 511371700 8.580000e-131 477.0
18 TraesCS6B01G468700 chr5A 76.238 909 185 23 1435 2335 537124655 537123770 1.450000e-123 453.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G468700 chr6B 717928351 717931768 3417 True 6312.000000 6312 100.000000 1 3418 1 chr6B.!!$R1 3417
1 TraesCS6B01G468700 chr6D 472809284 472811535 2251 True 1700.500000 2562 93.914500 1075 3418 2 chr6D.!!$R2 2343
2 TraesCS6B01G468700 chr6D 473114366 473114916 550 True 283.000000 283 76.471000 1151 1721 1 chr6D.!!$R1 570
3 TraesCS6B01G468700 chr6A 616942740 616943348 608 False 828.000000 828 91.817000 1 588 1 chr6A.!!$F1 587
4 TraesCS6B01G468700 chr6A 616965121 616966419 1298 False 619.433333 1321 93.619333 598 2458 3 chr6A.!!$F2 1860
5 TraesCS6B01G468700 chr6A 616884145 616885279 1134 True 475.000000 475 74.706000 1150 2334 1 chr6A.!!$R1 1184
6 TraesCS6B01G468700 chr7D 602286852 602287948 1096 False 595.000000 595 76.875000 1237 2337 1 chr7D.!!$F2 1100
7 TraesCS6B01G468700 chr7D 549834795 549835594 799 False 508.000000 508 78.509000 1570 2357 1 chr7D.!!$F1 787
8 TraesCS6B01G468700 chr7B 594119188 594123068 3880 False 511.000000 532 76.824000 1141 2353 2 chr7B.!!$F1 1212
9 TraesCS6B01G468700 chr7A 635273799 635274897 1098 False 507.000000 507 75.512000 1237 2335 1 chr7A.!!$F1 1098
10 TraesCS6B01G468700 chr5D 423534126 423535014 888 True 496.000000 496 76.982000 1435 2335 1 chr5D.!!$R1 900
11 TraesCS6B01G468700 chr5B 511371700 511372916 1216 True 477.000000 477 74.217000 1110 2335 1 chr5B.!!$R1 1225
12 TraesCS6B01G468700 chr5A 537123770 537124655 885 True 453.000000 453 76.238000 1435 2335 1 chr5A.!!$R1 900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
894 910 0.028902 GGCAAGTGTTTCCGTGTGTC 59.971 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2849 4475 0.102481 CAGCTTCCATGCATGCTTCC 59.898 55.0 21.69 9.07 33.03 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.309494 CCACATGTGATATTTTGAAGTGCTTG 59.691 38.462 27.46 0.00 0.00 4.01
41 42 6.864685 CACATGTGATATTTTGAAGTGCTTGT 59.135 34.615 21.64 0.00 0.00 3.16
205 221 0.627986 CAGCCAAAGGAGGAGGGAAT 59.372 55.000 0.00 0.00 0.00 3.01
210 226 1.002857 AAAGGAGGAGGGAATGGTGG 58.997 55.000 0.00 0.00 0.00 4.61
221 237 2.796245 GAATGGTGGTTGGAACGCGC 62.796 60.000 5.73 0.00 0.00 6.86
248 264 2.037772 CGGCTAGGATTGGCTACTTGAT 59.962 50.000 0.00 0.00 0.00 2.57
250 266 4.619394 CGGCTAGGATTGGCTACTTGATAG 60.619 50.000 0.00 0.00 0.00 2.08
252 268 5.337169 GGCTAGGATTGGCTACTTGATAGAG 60.337 48.000 0.00 0.00 31.83 2.43
253 269 5.337169 GCTAGGATTGGCTACTTGATAGAGG 60.337 48.000 0.00 0.00 31.83 3.69
254 270 3.326297 AGGATTGGCTACTTGATAGAGGC 59.674 47.826 0.00 0.00 36.36 4.70
255 271 2.890808 TTGGCTACTTGATAGAGGCG 57.109 50.000 0.00 0.00 38.55 5.52
257 273 2.940158 TGGCTACTTGATAGAGGCGTA 58.060 47.619 0.00 0.00 38.55 4.42
258 274 2.885266 TGGCTACTTGATAGAGGCGTAG 59.115 50.000 0.00 0.00 38.55 3.51
259 275 3.147629 GGCTACTTGATAGAGGCGTAGA 58.852 50.000 0.00 0.00 31.83 2.59
260 276 3.568853 GGCTACTTGATAGAGGCGTAGAA 59.431 47.826 0.00 0.00 31.83 2.10
261 277 4.037684 GGCTACTTGATAGAGGCGTAGAAA 59.962 45.833 0.00 0.00 31.83 2.52
262 278 5.279056 GGCTACTTGATAGAGGCGTAGAAAT 60.279 44.000 0.00 0.00 31.83 2.17
263 279 5.631512 GCTACTTGATAGAGGCGTAGAAATG 59.368 44.000 0.00 0.00 31.83 2.32
264 280 5.854010 ACTTGATAGAGGCGTAGAAATGA 57.146 39.130 0.00 0.00 0.00 2.57
266 282 6.640518 ACTTGATAGAGGCGTAGAAATGAAA 58.359 36.000 0.00 0.00 0.00 2.69
269 285 6.507900 TGATAGAGGCGTAGAAATGAAAGAG 58.492 40.000 0.00 0.00 0.00 2.85
270 286 6.321435 TGATAGAGGCGTAGAAATGAAAGAGA 59.679 38.462 0.00 0.00 0.00 3.10
271 287 5.606348 AGAGGCGTAGAAATGAAAGAGAT 57.394 39.130 0.00 0.00 0.00 2.75
272 288 5.355596 AGAGGCGTAGAAATGAAAGAGATG 58.644 41.667 0.00 0.00 0.00 2.90
274 290 4.162320 AGGCGTAGAAATGAAAGAGATGGA 59.838 41.667 0.00 0.00 0.00 3.41
275 291 4.876107 GGCGTAGAAATGAAAGAGATGGAA 59.124 41.667 0.00 0.00 0.00 3.53
276 292 5.354234 GGCGTAGAAATGAAAGAGATGGAAA 59.646 40.000 0.00 0.00 0.00 3.13
277 293 6.038714 GGCGTAGAAATGAAAGAGATGGAAAT 59.961 38.462 0.00 0.00 0.00 2.17
278 294 7.226720 GGCGTAGAAATGAAAGAGATGGAAATA 59.773 37.037 0.00 0.00 0.00 1.40
279 295 8.612619 GCGTAGAAATGAAAGAGATGGAAATAA 58.387 33.333 0.00 0.00 0.00 1.40
319 335 5.174037 TCTTCCGAAAAATCTACCACCAT 57.826 39.130 0.00 0.00 0.00 3.55
320 336 5.566469 TCTTCCGAAAAATCTACCACCATT 58.434 37.500 0.00 0.00 0.00 3.16
321 337 6.713276 TCTTCCGAAAAATCTACCACCATTA 58.287 36.000 0.00 0.00 0.00 1.90
322 338 7.169591 TCTTCCGAAAAATCTACCACCATTAA 58.830 34.615 0.00 0.00 0.00 1.40
323 339 7.666388 TCTTCCGAAAAATCTACCACCATTAAA 59.334 33.333 0.00 0.00 0.00 1.52
325 341 7.169591 TCCGAAAAATCTACCACCATTAAAGA 58.830 34.615 0.00 0.00 0.00 2.52
328 344 8.129211 CGAAAAATCTACCACCATTAAAGATCC 58.871 37.037 0.00 0.00 0.00 3.36
329 345 8.893563 AAAAATCTACCACCATTAAAGATCCA 57.106 30.769 0.00 0.00 0.00 3.41
332 348 6.001449 TCTACCACCATTAAAGATCCAAGG 57.999 41.667 0.00 0.00 0.00 3.61
333 349 4.675063 ACCACCATTAAAGATCCAAGGT 57.325 40.909 0.00 0.00 0.00 3.50
334 350 5.789574 ACCACCATTAAAGATCCAAGGTA 57.210 39.130 0.00 0.00 0.00 3.08
335 351 6.147437 ACCACCATTAAAGATCCAAGGTAA 57.853 37.500 0.00 0.00 0.00 2.85
337 353 6.187682 CCACCATTAAAGATCCAAGGTAAGT 58.812 40.000 0.00 0.00 0.00 2.24
338 354 6.318900 CCACCATTAAAGATCCAAGGTAAGTC 59.681 42.308 0.00 0.00 0.00 3.01
340 356 7.611855 CACCATTAAAGATCCAAGGTAAGTCTT 59.388 37.037 0.00 0.00 0.00 3.01
341 357 8.170730 ACCATTAAAGATCCAAGGTAAGTCTTT 58.829 33.333 0.00 0.00 40.85 2.52
347 363 8.794335 AAGATCCAAGGTAAGTCTTTATCAAC 57.206 34.615 0.00 0.00 0.00 3.18
348 364 8.152023 AGATCCAAGGTAAGTCTTTATCAACT 57.848 34.615 0.00 0.00 0.00 3.16
349 365 8.261522 AGATCCAAGGTAAGTCTTTATCAACTC 58.738 37.037 0.00 0.00 0.00 3.01
351 367 7.741785 TCCAAGGTAAGTCTTTATCAACTCAA 58.258 34.615 0.00 0.00 0.00 3.02
352 368 7.660208 TCCAAGGTAAGTCTTTATCAACTCAAC 59.340 37.037 0.00 0.00 0.00 3.18
353 369 7.444183 CCAAGGTAAGTCTTTATCAACTCAACA 59.556 37.037 0.00 0.00 0.00 3.33
354 370 9.003658 CAAGGTAAGTCTTTATCAACTCAACAT 57.996 33.333 0.00 0.00 0.00 2.71
355 371 8.779354 AGGTAAGTCTTTATCAACTCAACATC 57.221 34.615 0.00 0.00 0.00 3.06
357 373 8.660373 GGTAAGTCTTTATCAACTCAACATCAG 58.340 37.037 0.00 0.00 0.00 2.90
358 374 7.678947 AAGTCTTTATCAACTCAACATCAGG 57.321 36.000 0.00 0.00 0.00 3.86
359 375 6.773638 AGTCTTTATCAACTCAACATCAGGT 58.226 36.000 0.00 0.00 0.00 4.00
360 376 6.876257 AGTCTTTATCAACTCAACATCAGGTC 59.124 38.462 0.00 0.00 0.00 3.85
361 377 6.650807 GTCTTTATCAACTCAACATCAGGTCA 59.349 38.462 0.00 0.00 0.00 4.02
362 378 7.335422 GTCTTTATCAACTCAACATCAGGTCAT 59.665 37.037 0.00 0.00 0.00 3.06
363 379 8.539544 TCTTTATCAACTCAACATCAGGTCATA 58.460 33.333 0.00 0.00 0.00 2.15
365 381 5.482163 TCAACTCAACATCAGGTCATACA 57.518 39.130 0.00 0.00 0.00 2.29
366 382 5.863965 TCAACTCAACATCAGGTCATACAA 58.136 37.500 0.00 0.00 0.00 2.41
367 383 5.700832 TCAACTCAACATCAGGTCATACAAC 59.299 40.000 0.00 0.00 0.00 3.32
368 384 4.579869 ACTCAACATCAGGTCATACAACC 58.420 43.478 0.00 0.00 39.80 3.77
370 386 5.178096 TCAACATCAGGTCATACAACCAT 57.822 39.130 0.00 0.00 42.12 3.55
371 387 5.185454 TCAACATCAGGTCATACAACCATC 58.815 41.667 0.00 0.00 42.12 3.51
372 388 5.045651 TCAACATCAGGTCATACAACCATCT 60.046 40.000 0.00 0.00 42.12 2.90
373 389 5.028549 ACATCAGGTCATACAACCATCTC 57.971 43.478 0.00 0.00 42.12 2.75
375 391 5.045651 ACATCAGGTCATACAACCATCTCAA 60.046 40.000 0.00 0.00 42.12 3.02
377 393 6.065976 TCAGGTCATACAACCATCTCAAAT 57.934 37.500 0.00 0.00 42.12 2.32
378 394 7.194112 TCAGGTCATACAACCATCTCAAATA 57.806 36.000 0.00 0.00 42.12 1.40
379 395 7.629157 TCAGGTCATACAACCATCTCAAATAA 58.371 34.615 0.00 0.00 42.12 1.40
380 396 7.770433 TCAGGTCATACAACCATCTCAAATAAG 59.230 37.037 0.00 0.00 42.12 1.73
381 397 7.770433 CAGGTCATACAACCATCTCAAATAAGA 59.230 37.037 0.00 0.00 42.12 2.10
382 398 8.328758 AGGTCATACAACCATCTCAAATAAGAA 58.671 33.333 0.00 0.00 42.12 2.52
383 399 8.616076 GGTCATACAACCATCTCAAATAAGAAG 58.384 37.037 0.00 0.00 39.27 2.85
385 401 5.904362 ACAACCATCTCAAATAAGAAGCC 57.096 39.130 0.00 0.00 0.00 4.35
386 402 5.324409 ACAACCATCTCAAATAAGAAGCCA 58.676 37.500 0.00 0.00 0.00 4.75
387 403 5.183904 ACAACCATCTCAAATAAGAAGCCAC 59.816 40.000 0.00 0.00 0.00 5.01
388 404 4.273318 ACCATCTCAAATAAGAAGCCACC 58.727 43.478 0.00 0.00 0.00 4.61
389 405 3.313526 CCATCTCAAATAAGAAGCCACCG 59.686 47.826 0.00 0.00 0.00 4.94
390 406 3.973206 TCTCAAATAAGAAGCCACCGA 57.027 42.857 0.00 0.00 0.00 4.69
392 408 3.260884 TCTCAAATAAGAAGCCACCGAGT 59.739 43.478 0.00 0.00 0.00 4.18
394 410 3.074412 CAAATAAGAAGCCACCGAGTGT 58.926 45.455 3.82 0.00 0.00 3.55
395 411 3.418684 AATAAGAAGCCACCGAGTGTT 57.581 42.857 3.82 0.00 0.00 3.32
396 412 2.163818 TAAGAAGCCACCGAGTGTTG 57.836 50.000 3.82 0.00 0.00 3.33
397 413 0.180406 AAGAAGCCACCGAGTGTTGT 59.820 50.000 3.82 0.00 0.00 3.32
398 414 0.532862 AGAAGCCACCGAGTGTTGTG 60.533 55.000 3.82 0.00 0.00 3.33
399 415 0.814010 GAAGCCACCGAGTGTTGTGT 60.814 55.000 3.82 0.00 0.00 3.72
400 416 0.814010 AAGCCACCGAGTGTTGTGTC 60.814 55.000 3.82 0.00 0.00 3.67
401 417 1.522806 GCCACCGAGTGTTGTGTCA 60.523 57.895 3.82 0.00 0.00 3.58
402 418 1.772063 GCCACCGAGTGTTGTGTCAC 61.772 60.000 0.00 0.00 38.46 3.67
404 420 1.067974 CCACCGAGTGTTGTGTCACTA 59.932 52.381 4.27 0.00 46.81 2.74
406 422 2.731451 CACCGAGTGTTGTGTCACTATG 59.269 50.000 4.27 0.00 46.81 2.23
407 423 2.288825 ACCGAGTGTTGTGTCACTATGG 60.289 50.000 4.27 12.72 46.81 2.74
408 424 2.337583 CGAGTGTTGTGTCACTATGGG 58.662 52.381 4.27 0.00 46.81 4.00
409 425 2.076863 GAGTGTTGTGTCACTATGGGC 58.923 52.381 4.27 0.00 46.81 5.36
411 427 1.806542 GTGTTGTGTCACTATGGGCTG 59.193 52.381 4.27 0.00 35.68 4.85
412 428 1.696884 TGTTGTGTCACTATGGGCTGA 59.303 47.619 4.27 0.00 0.00 4.26
413 429 2.289631 TGTTGTGTCACTATGGGCTGAG 60.290 50.000 4.27 0.00 0.00 3.35
414 430 0.250234 TGTGTCACTATGGGCTGAGC 59.750 55.000 4.27 0.00 0.00 4.26
415 431 0.539051 GTGTCACTATGGGCTGAGCT 59.461 55.000 3.72 0.00 0.00 4.09
416 432 0.826715 TGTCACTATGGGCTGAGCTC 59.173 55.000 6.82 6.82 0.00 4.09
417 433 0.249238 GTCACTATGGGCTGAGCTCG 60.249 60.000 9.64 5.21 0.00 5.03
418 434 1.593750 CACTATGGGCTGAGCTCGC 60.594 63.158 18.35 18.35 0.00 5.03
420 436 1.370437 CTATGGGCTGAGCTCGCAT 59.630 57.895 24.72 17.08 39.81 4.73
421 437 0.605083 CTATGGGCTGAGCTCGCATA 59.395 55.000 24.72 17.25 38.02 3.14
423 439 2.030262 GGGCTGAGCTCGCATAGG 59.970 66.667 24.72 7.34 0.00 2.57
424 440 2.801631 GGGCTGAGCTCGCATAGGT 61.802 63.158 24.72 0.00 39.11 3.08
425 441 1.144936 GGCTGAGCTCGCATAGGTT 59.855 57.895 24.72 0.00 35.60 3.50
426 442 0.878086 GGCTGAGCTCGCATAGGTTC 60.878 60.000 24.72 8.27 35.60 3.62
427 443 0.179100 GCTGAGCTCGCATAGGTTCA 60.179 55.000 20.64 0.00 35.60 3.18
428 444 1.850377 CTGAGCTCGCATAGGTTCAG 58.150 55.000 9.64 0.00 35.60 3.02
429 445 0.179100 TGAGCTCGCATAGGTTCAGC 60.179 55.000 9.64 0.00 35.60 4.26
430 446 0.878086 GAGCTCGCATAGGTTCAGCC 60.878 60.000 0.00 0.00 35.60 4.85
432 448 0.744414 GCTCGCATAGGTTCAGCCAA 60.744 55.000 0.00 0.00 40.61 4.52
435 451 1.486310 TCGCATAGGTTCAGCCAAGAT 59.514 47.619 0.00 0.00 40.61 2.40
436 452 1.869767 CGCATAGGTTCAGCCAAGATC 59.130 52.381 0.00 0.00 40.61 2.75
439 455 1.213296 TAGGTTCAGCCAAGATCCCC 58.787 55.000 0.00 0.00 40.61 4.81
442 458 1.134068 GGTTCAGCCAAGATCCCCTAC 60.134 57.143 0.00 0.00 37.17 3.18
443 459 0.830648 TTCAGCCAAGATCCCCTACG 59.169 55.000 0.00 0.00 0.00 3.51
444 460 0.032515 TCAGCCAAGATCCCCTACGA 60.033 55.000 0.00 0.00 0.00 3.43
445 461 0.830648 CAGCCAAGATCCCCTACGAA 59.169 55.000 0.00 0.00 0.00 3.85
446 462 1.417890 CAGCCAAGATCCCCTACGAAT 59.582 52.381 0.00 0.00 0.00 3.34
447 463 1.417890 AGCCAAGATCCCCTACGAATG 59.582 52.381 0.00 0.00 0.00 2.67
448 464 1.884235 CCAAGATCCCCTACGAATGC 58.116 55.000 0.00 0.00 0.00 3.56
449 465 1.543429 CCAAGATCCCCTACGAATGCC 60.543 57.143 0.00 0.00 0.00 4.40
451 467 1.004918 GATCCCCTACGAATGCCGG 60.005 63.158 0.00 0.00 43.93 6.13
452 468 1.458777 ATCCCCTACGAATGCCGGA 60.459 57.895 5.05 0.00 43.93 5.14
457 473 1.813859 CTACGAATGCCGGAGTGGA 59.186 57.895 5.05 0.00 44.13 4.02
460 476 1.143838 CGAATGCCGGAGTGGATGA 59.856 57.895 5.05 0.00 42.00 2.92
462 478 1.303309 GAATGCCGGAGTGGATGAAG 58.697 55.000 5.05 0.00 42.00 3.02
463 479 0.107017 AATGCCGGAGTGGATGAAGG 60.107 55.000 5.05 0.00 42.00 3.46
464 480 0.982852 ATGCCGGAGTGGATGAAGGA 60.983 55.000 5.05 0.00 42.00 3.36
465 481 0.982852 TGCCGGAGTGGATGAAGGAT 60.983 55.000 5.05 0.00 42.00 3.24
466 482 0.533755 GCCGGAGTGGATGAAGGATG 60.534 60.000 5.05 0.00 42.00 3.51
467 483 1.123077 CCGGAGTGGATGAAGGATGA 58.877 55.000 0.00 0.00 42.00 2.92
468 484 1.202580 CCGGAGTGGATGAAGGATGAC 60.203 57.143 0.00 0.00 42.00 3.06
469 485 1.536922 CGGAGTGGATGAAGGATGACG 60.537 57.143 0.00 0.00 0.00 4.35
470 486 1.576356 GAGTGGATGAAGGATGACGC 58.424 55.000 0.00 0.00 0.00 5.19
471 487 0.179000 AGTGGATGAAGGATGACGCC 59.821 55.000 0.00 0.00 0.00 5.68
472 488 0.107703 GTGGATGAAGGATGACGCCA 60.108 55.000 0.00 0.00 0.00 5.69
474 490 1.212688 TGGATGAAGGATGACGCCAAT 59.787 47.619 0.00 0.00 0.00 3.16
475 491 1.605710 GGATGAAGGATGACGCCAATG 59.394 52.381 0.00 0.00 0.00 2.82
476 492 1.605710 GATGAAGGATGACGCCAATGG 59.394 52.381 0.00 0.00 0.00 3.16
477 493 0.617935 TGAAGGATGACGCCAATGGA 59.382 50.000 2.05 0.00 0.00 3.41
478 494 1.303309 GAAGGATGACGCCAATGGAG 58.697 55.000 2.05 1.08 0.00 3.86
479 495 0.749454 AAGGATGACGCCAATGGAGC 60.749 55.000 2.05 0.00 0.00 4.70
480 496 2.189499 GGATGACGCCAATGGAGCC 61.189 63.158 2.05 0.00 0.00 4.70
481 497 1.451927 GATGACGCCAATGGAGCCA 60.452 57.895 2.05 0.00 0.00 4.75
484 500 3.129913 GACGCCAATGGAGCCATGC 62.130 63.158 2.05 2.43 36.68 4.06
486 502 2.760799 GCCAATGGAGCCATGCCA 60.761 61.111 2.05 0.00 40.24 4.92
487 503 3.085119 GCCAATGGAGCCATGCCAC 62.085 63.158 2.05 0.00 38.44 5.01
489 505 2.042639 AATGGAGCCATGCCACCC 60.043 61.111 2.18 0.00 38.44 4.61
490 506 3.684369 AATGGAGCCATGCCACCCC 62.684 63.158 2.18 0.00 38.44 4.95
492 508 4.147587 GGAGCCATGCCACCCCAT 62.148 66.667 0.00 0.00 0.00 4.00
493 509 2.042639 GAGCCATGCCACCCCATT 60.043 61.111 0.00 0.00 0.00 3.16
494 510 2.364579 AGCCATGCCACCCCATTG 60.365 61.111 0.00 0.00 0.00 2.82
495 511 2.364056 GCCATGCCACCCCATTGA 60.364 61.111 0.00 0.00 0.00 2.57
497 513 1.751349 GCCATGCCACCCCATTGATC 61.751 60.000 0.00 0.00 0.00 2.92
498 514 0.105862 CCATGCCACCCCATTGATCT 60.106 55.000 0.00 0.00 0.00 2.75
499 515 1.325355 CATGCCACCCCATTGATCTC 58.675 55.000 0.00 0.00 0.00 2.75
500 516 0.179009 ATGCCACCCCATTGATCTCG 60.179 55.000 0.00 0.00 0.00 4.04
501 517 1.271127 TGCCACCCCATTGATCTCGA 61.271 55.000 0.00 0.00 0.00 4.04
503 519 0.530650 CCACCCCATTGATCTCGACG 60.531 60.000 0.00 0.00 0.00 5.12
505 521 1.143838 CCCCATTGATCTCGACGCA 59.856 57.895 0.00 0.00 0.00 5.24
506 522 0.877649 CCCCATTGATCTCGACGCAG 60.878 60.000 0.00 0.00 0.00 5.18
507 523 1.493950 CCCATTGATCTCGACGCAGC 61.494 60.000 0.00 0.00 0.00 5.25
508 524 0.807275 CCATTGATCTCGACGCAGCA 60.807 55.000 0.00 0.00 0.00 4.41
509 525 1.001624 CATTGATCTCGACGCAGCAA 58.998 50.000 0.00 0.70 0.00 3.91
510 526 1.002366 ATTGATCTCGACGCAGCAAC 58.998 50.000 0.00 0.00 0.00 4.17
512 528 1.446099 GATCTCGACGCAGCAACCA 60.446 57.895 0.00 0.00 0.00 3.67
513 529 0.807667 GATCTCGACGCAGCAACCAT 60.808 55.000 0.00 0.00 0.00 3.55
514 530 1.086067 ATCTCGACGCAGCAACCATG 61.086 55.000 0.00 0.00 0.00 3.66
515 531 2.741985 TCGACGCAGCAACCATGG 60.742 61.111 11.19 11.19 0.00 3.66
516 532 2.741985 CGACGCAGCAACCATGGA 60.742 61.111 21.47 0.00 0.00 3.41
517 533 2.324330 CGACGCAGCAACCATGGAA 61.324 57.895 21.47 0.00 0.00 3.53
518 534 1.647545 CGACGCAGCAACCATGGAAT 61.648 55.000 21.47 3.48 0.00 3.01
519 535 0.179156 GACGCAGCAACCATGGAATG 60.179 55.000 21.47 17.62 46.21 2.67
531 547 3.447918 CATGGAATGGAGATTTGGCAC 57.552 47.619 0.00 0.00 41.79 5.01
532 548 2.905415 TGGAATGGAGATTTGGCACT 57.095 45.000 0.00 0.00 0.00 4.40
533 549 2.449464 TGGAATGGAGATTTGGCACTG 58.551 47.619 0.00 0.00 0.00 3.66
535 551 2.424956 GGAATGGAGATTTGGCACTGAC 59.575 50.000 0.00 0.00 0.00 3.51
536 552 2.885135 ATGGAGATTTGGCACTGACA 57.115 45.000 0.00 0.00 0.00 3.58
538 554 1.271543 TGGAGATTTGGCACTGACAGG 60.272 52.381 7.51 0.00 0.00 4.00
540 556 0.957395 AGATTTGGCACTGACAGGCG 60.957 55.000 7.51 0.00 0.00 5.52
541 557 1.228245 ATTTGGCACTGACAGGCGT 60.228 52.632 7.51 0.00 0.00 5.68
542 558 1.518056 ATTTGGCACTGACAGGCGTG 61.518 55.000 7.51 4.53 0.00 5.34
548 564 2.180204 ACTGACAGGCGTGCAACAC 61.180 57.895 6.26 0.00 35.74 3.32
549 565 2.896801 CTGACAGGCGTGCAACACC 61.897 63.158 6.26 0.00 40.04 4.16
551 567 4.849310 ACAGGCGTGCAACACCGT 62.849 61.111 6.26 0.00 45.78 4.83
553 569 2.826738 AGGCGTGCAACACCGTTT 60.827 55.556 0.00 0.00 45.78 3.60
554 570 2.353030 GGCGTGCAACACCGTTTC 60.353 61.111 0.00 0.00 35.74 2.78
555 571 2.353030 GCGTGCAACACCGTTTCC 60.353 61.111 0.00 0.00 35.74 3.13
556 572 2.830285 GCGTGCAACACCGTTTCCT 61.830 57.895 0.00 0.00 35.74 3.36
557 573 1.278637 CGTGCAACACCGTTTCCTC 59.721 57.895 0.00 0.00 35.74 3.71
559 575 1.527380 TGCAACACCGTTTCCTCCC 60.527 57.895 0.00 0.00 0.00 4.30
560 576 1.228154 GCAACACCGTTTCCTCCCT 60.228 57.895 0.00 0.00 0.00 4.20
561 577 0.822121 GCAACACCGTTTCCTCCCTT 60.822 55.000 0.00 0.00 0.00 3.95
562 578 1.543871 GCAACACCGTTTCCTCCCTTA 60.544 52.381 0.00 0.00 0.00 2.69
566 582 2.027469 ACACCGTTTCCTCCCTTATGAC 60.027 50.000 0.00 0.00 0.00 3.06
567 583 2.236395 CACCGTTTCCTCCCTTATGACT 59.764 50.000 0.00 0.00 0.00 3.41
568 584 2.236395 ACCGTTTCCTCCCTTATGACTG 59.764 50.000 0.00 0.00 0.00 3.51
571 587 2.239907 GTTTCCTCCCTTATGACTGCCT 59.760 50.000 0.00 0.00 0.00 4.75
572 588 3.414759 TTCCTCCCTTATGACTGCCTA 57.585 47.619 0.00 0.00 0.00 3.93
573 589 3.414759 TCCTCCCTTATGACTGCCTAA 57.585 47.619 0.00 0.00 0.00 2.69
574 590 3.309296 TCCTCCCTTATGACTGCCTAAG 58.691 50.000 0.00 0.00 0.00 2.18
575 591 3.052109 TCCTCCCTTATGACTGCCTAAGA 60.052 47.826 0.00 0.00 0.00 2.10
577 593 5.087323 CCTCCCTTATGACTGCCTAAGATA 58.913 45.833 0.00 0.00 0.00 1.98
578 594 5.544176 CCTCCCTTATGACTGCCTAAGATAA 59.456 44.000 0.00 0.00 0.00 1.75
579 595 6.295575 CCTCCCTTATGACTGCCTAAGATAAG 60.296 46.154 0.00 0.00 0.00 1.73
580 596 5.544176 TCCCTTATGACTGCCTAAGATAAGG 59.456 44.000 0.00 0.00 39.96 2.69
590 606 3.288092 CCTAAGATAAGGCCCAACAACC 58.712 50.000 0.00 0.00 0.00 3.77
592 608 3.473113 AAGATAAGGCCCAACAACCAT 57.527 42.857 0.00 0.00 0.00 3.55
593 609 2.738743 AGATAAGGCCCAACAACCATG 58.261 47.619 0.00 0.00 0.00 3.66
594 610 1.756538 GATAAGGCCCAACAACCATGG 59.243 52.381 11.19 11.19 37.71 3.66
595 611 0.780637 TAAGGCCCAACAACCATGGA 59.219 50.000 21.47 0.00 40.56 3.41
648 664 3.499737 GTGCGGGCAATCAGACGG 61.500 66.667 0.00 0.00 0.00 4.79
666 682 3.524759 CTGTCGTCGCGTCGCTTC 61.525 66.667 20.62 13.18 0.00 3.86
686 702 1.595093 GGAACCATTCCCAGCAACCG 61.595 60.000 0.00 0.00 44.30 4.44
689 705 2.398554 CCATTCCCAGCAACCGTCG 61.399 63.158 0.00 0.00 0.00 5.12
794 810 4.174009 TGAATCTACGAAGTTGCTACTGC 58.826 43.478 0.36 0.00 37.78 4.40
808 824 3.440173 TGCTACTGCAGATAAGTTTTGCC 59.560 43.478 23.35 1.81 45.31 4.52
883 899 1.734163 GTACCTAATGCGGCAAGTGT 58.266 50.000 6.82 4.93 0.00 3.55
884 900 2.081462 GTACCTAATGCGGCAAGTGTT 58.919 47.619 6.82 0.00 0.00 3.32
885 901 1.616159 ACCTAATGCGGCAAGTGTTT 58.384 45.000 6.82 0.00 0.00 2.83
886 902 1.539827 ACCTAATGCGGCAAGTGTTTC 59.460 47.619 6.82 0.00 0.00 2.78
887 903 1.135402 CCTAATGCGGCAAGTGTTTCC 60.135 52.381 6.82 0.00 0.00 3.13
888 904 0.519519 TAATGCGGCAAGTGTTTCCG 59.480 50.000 6.82 0.00 45.46 4.30
890 906 2.051345 GCGGCAAGTGTTTCCGTG 60.051 61.111 0.00 0.00 44.58 4.94
893 909 1.711060 CGGCAAGTGTTTCCGTGTGT 61.711 55.000 0.00 0.00 38.47 3.72
894 910 0.028902 GGCAAGTGTTTCCGTGTGTC 59.971 55.000 0.00 0.00 0.00 3.67
896 912 0.303493 CAAGTGTTTCCGTGTGTCCG 59.697 55.000 0.00 0.00 0.00 4.79
898 914 0.391597 AGTGTTTCCGTGTGTCCGAT 59.608 50.000 0.00 0.00 0.00 4.18
900 916 0.389757 TGTTTCCGTGTGTCCGATCA 59.610 50.000 0.00 0.00 0.00 2.92
901 917 1.068474 GTTTCCGTGTGTCCGATCAG 58.932 55.000 0.00 0.00 0.00 2.90
902 918 0.037697 TTTCCGTGTGTCCGATCAGG 60.038 55.000 0.00 0.00 42.97 3.86
915 931 3.637229 TCCGATCAGGACTTTGTATCCTC 59.363 47.826 2.65 0.00 45.25 3.71
916 932 3.551046 CCGATCAGGACTTTGTATCCTCG 60.551 52.174 0.00 0.00 45.25 4.63
918 934 4.612943 GATCAGGACTTTGTATCCTCGTC 58.387 47.826 0.00 0.00 45.25 4.20
933 949 2.729882 CCTCGTCCGTTCAAGTTAGTTG 59.270 50.000 0.00 0.00 37.52 3.16
956 972 0.333652 TCCGTCTAGGACATGACCCA 59.666 55.000 10.77 0.00 45.98 4.51
976 992 7.621683 TGACCCAGCCATGTATATATACACATA 59.378 37.037 24.43 5.54 45.11 2.29
996 1012 8.876181 ACACATATAATACATAGGCCTGTAACA 58.124 33.333 17.99 3.62 35.37 2.41
997 1013 9.151471 CACATATAATACATAGGCCTGTAACAC 57.849 37.037 17.99 0.00 35.37 3.32
998 1014 8.319146 ACATATAATACATAGGCCTGTAACACC 58.681 37.037 17.99 0.00 35.37 4.16
999 1015 4.432980 AATACATAGGCCTGTAACACCC 57.567 45.455 17.99 0.00 35.37 4.61
1017 1033 0.727970 CCACCGTGACAAACAAACGA 59.272 50.000 0.00 0.00 39.64 3.85
1021 1037 1.260561 CCGTGACAAACAAACGAGAGG 59.739 52.381 0.00 0.00 39.64 3.69
1049 1065 3.782046 AGATTAGATCAACAACGACGGG 58.218 45.455 0.00 0.00 0.00 5.28
1051 1067 2.933495 TAGATCAACAACGACGGGAG 57.067 50.000 0.00 0.00 0.00 4.30
1052 1068 0.389948 AGATCAACAACGACGGGAGC 60.390 55.000 0.00 0.00 0.00 4.70
1053 1069 1.683790 GATCAACAACGACGGGAGCG 61.684 60.000 0.00 0.00 35.92 5.03
1055 1071 2.355481 AACAACGACGGGAGCGAC 60.355 61.111 0.00 0.00 34.41 5.19
1069 1085 4.657824 CGACGGACGTGGCAGGTT 62.658 66.667 14.71 0.00 37.22 3.50
1070 1086 2.280592 GACGGACGTGGCAGGTTT 60.281 61.111 14.71 2.12 0.00 3.27
1071 1087 2.590575 ACGGACGTGGCAGGTTTG 60.591 61.111 14.71 11.99 0.00 2.93
1088 1104 3.006940 GTTTGCACATCGATCCCAACTA 58.993 45.455 0.00 0.00 0.00 2.24
1091 1107 2.433970 TGCACATCGATCCCAACTATCA 59.566 45.455 0.00 0.00 0.00 2.15
1097 1113 6.094048 CACATCGATCCCAACTATCAAACTTT 59.906 38.462 0.00 0.00 0.00 2.66
1103 1119 7.171678 CGATCCCAACTATCAAACTTTCTATCC 59.828 40.741 0.00 0.00 0.00 2.59
1132 1148 4.156190 GTGACTGAGTAGACAGATTTCCGA 59.844 45.833 0.00 0.00 40.63 4.55
1187 2697 3.889538 CGGTGTATCTATCTTGGAGGACA 59.110 47.826 0.00 0.00 0.00 4.02
1366 2879 6.306987 GTCCATCAAGTATTATCCCAATGGT 58.693 40.000 0.00 0.00 35.14 3.55
1452 2986 0.606401 CATGTGGAAGCCAGGTTCGT 60.606 55.000 3.70 0.00 32.34 3.85
1462 2996 4.994907 AGCCAGGTTCGTTTTTAGTTTT 57.005 36.364 0.00 0.00 0.00 2.43
1721 3283 4.281688 ACCACCATTTCAACAATCTCCTTG 59.718 41.667 0.00 0.00 40.90 3.61
2024 3607 4.320057 CGGAAGCAATAGAAGATGGAATGC 60.320 45.833 0.00 0.00 0.00 3.56
2105 3688 0.245539 ATGCATTTGTGTGAGGCAGC 59.754 50.000 0.00 0.00 37.96 5.25
2280 3897 3.386932 TGTATACACGACCTACCCCTT 57.613 47.619 0.08 0.00 0.00 3.95
2326 3946 0.816018 TTGCTTCGAACCAGCGGAAA 60.816 50.000 0.00 0.00 40.45 3.13
2385 4009 4.214437 GAGCAATTTCAAAGTGACACTCG 58.786 43.478 8.93 3.58 0.00 4.18
2387 4011 3.725740 GCAATTTCAAAGTGACACTCGTG 59.274 43.478 8.93 10.41 0.00 4.35
2399 4023 2.793268 CACTCGTGTGCATGTATGTG 57.207 50.000 4.47 0.00 37.38 3.21
2400 4024 2.336667 CACTCGTGTGCATGTATGTGA 58.663 47.619 4.47 0.00 37.38 3.58
2401 4025 2.092681 CACTCGTGTGCATGTATGTGAC 59.907 50.000 4.47 0.00 37.38 3.67
2402 4026 1.660607 CTCGTGTGCATGTATGTGACC 59.339 52.381 0.00 0.00 0.00 4.02
2403 4027 0.726827 CGTGTGCATGTATGTGACCC 59.273 55.000 0.00 0.00 0.00 4.46
2404 4028 1.094785 GTGTGCATGTATGTGACCCC 58.905 55.000 0.00 0.00 0.00 4.95
2405 4029 0.034574 TGTGCATGTATGTGACCCCC 60.035 55.000 0.00 0.00 0.00 5.40
2406 4030 0.255890 GTGCATGTATGTGACCCCCT 59.744 55.000 0.00 0.00 0.00 4.79
2407 4031 0.998928 TGCATGTATGTGACCCCCTT 59.001 50.000 0.00 0.00 0.00 3.95
2408 4032 1.357420 TGCATGTATGTGACCCCCTTT 59.643 47.619 0.00 0.00 0.00 3.11
2409 4033 2.225242 TGCATGTATGTGACCCCCTTTT 60.225 45.455 0.00 0.00 0.00 2.27
2410 4034 2.427095 GCATGTATGTGACCCCCTTTTC 59.573 50.000 0.00 0.00 0.00 2.29
2411 4035 2.483014 TGTATGTGACCCCCTTTTCG 57.517 50.000 0.00 0.00 0.00 3.46
2412 4036 1.979308 TGTATGTGACCCCCTTTTCGA 59.021 47.619 0.00 0.00 0.00 3.71
2413 4037 2.372504 TGTATGTGACCCCCTTTTCGAA 59.627 45.455 0.00 0.00 0.00 3.71
2414 4038 2.668144 ATGTGACCCCCTTTTCGAAA 57.332 45.000 6.47 6.47 0.00 3.46
2415 4039 2.438800 TGTGACCCCCTTTTCGAAAA 57.561 45.000 21.35 21.35 0.00 2.29
2416 4040 2.736347 TGTGACCCCCTTTTCGAAAAA 58.264 42.857 22.67 4.92 0.00 1.94
2464 4088 3.354089 AATCCACGTGTCTTGCTTTTG 57.646 42.857 15.65 0.00 0.00 2.44
2465 4089 1.745232 TCCACGTGTCTTGCTTTTGT 58.255 45.000 15.65 0.00 0.00 2.83
2466 4090 1.668751 TCCACGTGTCTTGCTTTTGTC 59.331 47.619 15.65 0.00 0.00 3.18
2467 4091 1.400142 CCACGTGTCTTGCTTTTGTCA 59.600 47.619 15.65 0.00 0.00 3.58
2474 4099 5.284079 GTGTCTTGCTTTTGTCACATCAAT 58.716 37.500 0.00 0.00 0.00 2.57
2508 4133 4.899502 TCTTGTTTGCCAAACCAGAAAAA 58.100 34.783 18.61 5.27 39.38 1.94
2510 4135 3.339141 TGTTTGCCAAACCAGAAAAACC 58.661 40.909 17.16 0.00 40.67 3.27
2561 4186 4.700213 GGAATATTGTAGTGGTGTGCAAGT 59.300 41.667 0.00 0.00 0.00 3.16
2576 4201 3.084039 TGCAAGTTCCCAAGCTAATCAG 58.916 45.455 0.00 0.00 0.00 2.90
2588 4213 5.163683 CCAAGCTAATCAGTTTGTCCTCATG 60.164 44.000 0.00 0.00 40.35 3.07
2609 4234 0.527817 GGCCACTACAATCTCGACCG 60.528 60.000 0.00 0.00 0.00 4.79
2610 4235 0.527817 GCCACTACAATCTCGACCGG 60.528 60.000 0.00 0.00 0.00 5.28
2637 4262 5.030147 AGTCATGTGGGGTTCTGTTCTATA 58.970 41.667 0.00 0.00 0.00 1.31
2689 4315 4.236935 CCACGGTTTGATTGATTTCCTTG 58.763 43.478 0.00 0.00 0.00 3.61
2780 4406 6.257849 ATACATCGTGTAGTTGCAAGTATTGG 59.742 38.462 16.77 9.11 40.60 3.16
2796 4422 6.737254 AGTATTGGAGTCCATACGTTTTTG 57.263 37.500 14.00 0.00 31.53 2.44
2798 4424 3.773418 TGGAGTCCATACGTTTTTGGA 57.227 42.857 8.12 9.70 39.70 3.53
2799 4425 4.088056 TGGAGTCCATACGTTTTTGGAA 57.912 40.909 8.12 0.00 43.42 3.53
2800 4426 4.462133 TGGAGTCCATACGTTTTTGGAAA 58.538 39.130 8.12 1.77 43.42 3.13
2801 4427 4.276431 TGGAGTCCATACGTTTTTGGAAAC 59.724 41.667 8.12 11.23 43.42 2.78
2802 4428 4.276431 GGAGTCCATACGTTTTTGGAAACA 59.724 41.667 14.02 0.00 43.42 2.83
2803 4429 5.048294 GGAGTCCATACGTTTTTGGAAACAT 60.048 40.000 14.02 4.01 43.42 2.71
2804 4430 5.768317 AGTCCATACGTTTTTGGAAACATG 58.232 37.500 14.02 0.00 43.42 3.21
2805 4431 5.300792 AGTCCATACGTTTTTGGAAACATGT 59.699 36.000 14.02 0.00 43.42 3.21
2806 4432 5.980715 GTCCATACGTTTTTGGAAACATGTT 59.019 36.000 4.92 4.92 43.42 2.71
2807 4433 6.477360 GTCCATACGTTTTTGGAAACATGTTT 59.523 34.615 23.49 23.49 43.42 2.83
2808 4434 7.010645 GTCCATACGTTTTTGGAAACATGTTTT 59.989 33.333 24.02 8.91 43.42 2.43
2809 4435 7.549488 TCCATACGTTTTTGGAAACATGTTTTT 59.451 29.630 24.02 3.66 44.25 1.94
2837 4463 1.725641 TGAGTAGCATCAACTTGCCG 58.274 50.000 0.00 0.00 43.83 5.69
2838 4464 1.001974 TGAGTAGCATCAACTTGCCGT 59.998 47.619 0.00 0.00 43.83 5.68
2839 4465 1.661112 GAGTAGCATCAACTTGCCGTC 59.339 52.381 0.00 0.00 43.83 4.79
2840 4466 0.727398 GTAGCATCAACTTGCCGTCC 59.273 55.000 0.00 0.00 43.83 4.79
2841 4467 0.323302 TAGCATCAACTTGCCGTCCA 59.677 50.000 0.00 0.00 43.83 4.02
2842 4468 0.322816 AGCATCAACTTGCCGTCCAT 60.323 50.000 0.00 0.00 43.83 3.41
2843 4469 0.179156 GCATCAACTTGCCGTCCATG 60.179 55.000 0.00 0.00 36.60 3.66
2844 4470 1.167851 CATCAACTTGCCGTCCATGT 58.832 50.000 0.00 0.00 33.65 3.21
2845 4471 1.541147 CATCAACTTGCCGTCCATGTT 59.459 47.619 0.00 0.63 41.05 2.71
2846 4472 1.686355 TCAACTTGCCGTCCATGTTT 58.314 45.000 0.00 0.00 39.11 2.83
2847 4473 2.028130 TCAACTTGCCGTCCATGTTTT 58.972 42.857 0.00 0.00 39.11 2.43
2848 4474 2.428890 TCAACTTGCCGTCCATGTTTTT 59.571 40.909 0.00 0.00 39.11 1.94
2849 4475 2.507339 ACTTGCCGTCCATGTTTTTG 57.493 45.000 0.00 0.00 0.00 2.44
2850 4476 1.068434 ACTTGCCGTCCATGTTTTTGG 59.932 47.619 0.00 0.00 38.18 3.28
2851 4477 1.339610 CTTGCCGTCCATGTTTTTGGA 59.660 47.619 0.00 0.00 43.56 3.53
2858 4484 3.042871 TCCATGTTTTTGGAAGCATGC 57.957 42.857 10.51 10.51 46.77 4.06
2859 4485 2.367894 TCCATGTTTTTGGAAGCATGCA 59.632 40.909 21.98 0.00 46.77 3.96
2860 4486 3.008157 TCCATGTTTTTGGAAGCATGCAT 59.992 39.130 21.98 8.13 46.77 3.96
2861 4487 3.126171 CCATGTTTTTGGAAGCATGCATG 59.874 43.478 22.70 22.70 46.77 4.06
2862 4488 2.768698 TGTTTTTGGAAGCATGCATGG 58.231 42.857 27.34 10.03 0.00 3.66
2863 4489 2.367894 TGTTTTTGGAAGCATGCATGGA 59.632 40.909 27.34 0.00 0.00 3.41
2864 4490 3.181457 TGTTTTTGGAAGCATGCATGGAA 60.181 39.130 27.34 4.25 0.00 3.53
2865 4491 3.322211 TTTTGGAAGCATGCATGGAAG 57.678 42.857 27.34 2.89 0.00 3.46
2866 4492 0.533491 TTGGAAGCATGCATGGAAGC 59.467 50.000 27.34 13.51 0.00 3.86
2867 4493 0.323999 TGGAAGCATGCATGGAAGCT 60.324 50.000 27.34 11.42 39.37 3.74
2883 4509 2.217510 AGCTGAGAGTCCCGTTCTTA 57.782 50.000 0.00 0.00 0.00 2.10
2923 4549 1.221021 GGTTAGGCCCTGGTCTTCG 59.779 63.158 0.00 0.00 0.00 3.79
2956 4582 3.440415 GGCCGGCCTTTTCCTTCG 61.440 66.667 38.76 0.00 0.00 3.79
2959 4585 1.579429 CCGGCCTTTTCCTTCGTTG 59.421 57.895 0.00 0.00 0.00 4.10
2962 4588 1.179174 GGCCTTTTCCTTCGTTGCCT 61.179 55.000 0.00 0.00 34.61 4.75
2987 4613 3.889815 TGGCTAATTACTGCATGCTCTT 58.110 40.909 20.33 5.37 0.00 2.85
2993 4619 4.778213 ATTACTGCATGCTCTTCCCTTA 57.222 40.909 20.33 0.00 0.00 2.69
3047 4677 5.560724 TCAAGCTTTTTCATAGCCTAGTGT 58.439 37.500 0.00 0.00 39.47 3.55
3060 4690 2.624838 GCCTAGTGTGCCATTTATGCAT 59.375 45.455 3.79 3.79 41.46 3.96
3086 4716 6.402550 GCACATATTGCGGATTTTAGATCGAT 60.403 38.462 0.00 0.00 42.79 3.59
3087 4717 7.176075 CACATATTGCGGATTTTAGATCGATC 58.824 38.462 17.91 17.91 0.00 3.69
3088 4718 4.910746 ATTGCGGATTTTAGATCGATCG 57.089 40.909 19.33 9.36 0.00 3.69
3089 4719 3.636282 TGCGGATTTTAGATCGATCGA 57.364 42.857 21.86 21.86 0.00 3.59
3180 4810 4.815533 ACTATATAGCCTCCACATGCTG 57.184 45.455 9.78 0.00 38.52 4.41
3200 4830 1.943340 GGATCATCTTCAAACGGGCTC 59.057 52.381 0.00 0.00 0.00 4.70
3220 4850 0.026803 GCGTCAGACATGCCGAATTC 59.973 55.000 0.41 0.00 26.42 2.17
3260 4890 2.678336 CCTAGTTTCCCGATTTCACTGC 59.322 50.000 0.00 0.00 0.00 4.40
3339 4969 3.019564 CCCAACCCATGAACTCTCAATC 58.980 50.000 0.00 0.00 34.49 2.67
3360 4990 1.631405 TTTTCAAGGCCATGGACCAG 58.369 50.000 16.13 7.36 0.00 4.00
3367 4997 2.996395 CCATGGACCAGCTGCTCT 59.004 61.111 5.56 0.00 0.00 4.09
3413 5043 2.898738 CTCCATGCTGAGCTCGGT 59.101 61.111 23.36 1.80 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.841442 AGACCTTTGGCTACAGACAC 57.159 50.000 0.00 0.00 29.05 3.67
41 42 2.703536 TGAAGACCTTTGGCTACAGACA 59.296 45.455 0.00 0.00 0.00 3.41
120 121 2.930950 TGGCAAAACACTCTAAGCACT 58.069 42.857 0.00 0.00 0.00 4.40
192 208 0.178831 ACCACCATTCCCTCCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
210 226 4.364409 GTCACCGCGCGTTCCAAC 62.364 66.667 29.95 14.92 0.00 3.77
221 237 1.227263 CCAATCCTAGCCGTCACCG 60.227 63.158 0.00 0.00 0.00 4.94
248 264 6.461648 CCATCTCTTTCATTTCTACGCCTCTA 60.462 42.308 0.00 0.00 0.00 2.43
250 266 4.509600 CCATCTCTTTCATTTCTACGCCTC 59.490 45.833 0.00 0.00 0.00 4.70
252 268 4.442706 TCCATCTCTTTCATTTCTACGCC 58.557 43.478 0.00 0.00 0.00 5.68
253 269 6.422776 TTTCCATCTCTTTCATTTCTACGC 57.577 37.500 0.00 0.00 0.00 4.42
297 313 4.627284 TGGTGGTAGATTTTTCGGAAGA 57.373 40.909 0.00 0.00 39.20 2.87
299 315 7.666388 TCTTTAATGGTGGTAGATTTTTCGGAA 59.334 33.333 0.00 0.00 0.00 4.30
301 317 7.385778 TCTTTAATGGTGGTAGATTTTTCGG 57.614 36.000 0.00 0.00 0.00 4.30
302 318 8.129211 GGATCTTTAATGGTGGTAGATTTTTCG 58.871 37.037 0.00 0.00 0.00 3.46
303 319 8.966868 TGGATCTTTAATGGTGGTAGATTTTTC 58.033 33.333 0.00 0.00 0.00 2.29
307 323 7.062957 CCTTGGATCTTTAATGGTGGTAGATT 58.937 38.462 0.00 0.00 0.00 2.40
310 326 5.755849 ACCTTGGATCTTTAATGGTGGTAG 58.244 41.667 0.00 0.00 0.00 3.18
312 328 4.675063 ACCTTGGATCTTTAATGGTGGT 57.325 40.909 0.00 0.00 0.00 4.16
313 329 6.187682 ACTTACCTTGGATCTTTAATGGTGG 58.812 40.000 0.00 0.00 0.00 4.61
314 330 7.112779 AGACTTACCTTGGATCTTTAATGGTG 58.887 38.462 0.00 0.00 0.00 4.17
316 332 8.581253 AAAGACTTACCTTGGATCTTTAATGG 57.419 34.615 0.00 0.00 37.74 3.16
321 337 9.232473 GTTGATAAAGACTTACCTTGGATCTTT 57.768 33.333 0.00 0.00 41.33 2.52
322 338 8.606830 AGTTGATAAAGACTTACCTTGGATCTT 58.393 33.333 0.00 0.00 0.00 2.40
323 339 8.152023 AGTTGATAAAGACTTACCTTGGATCT 57.848 34.615 0.00 0.00 0.00 2.75
325 341 7.918076 TGAGTTGATAAAGACTTACCTTGGAT 58.082 34.615 0.00 0.00 0.00 3.41
328 344 8.378172 TGTTGAGTTGATAAAGACTTACCTTG 57.622 34.615 0.00 0.00 0.00 3.61
329 345 9.220767 GATGTTGAGTTGATAAAGACTTACCTT 57.779 33.333 0.00 0.00 0.00 3.50
332 348 8.660373 CCTGATGTTGAGTTGATAAAGACTTAC 58.340 37.037 0.00 0.00 0.00 2.34
333 349 8.375506 ACCTGATGTTGAGTTGATAAAGACTTA 58.624 33.333 0.00 0.00 0.00 2.24
334 350 7.227156 ACCTGATGTTGAGTTGATAAAGACTT 58.773 34.615 0.00 0.00 0.00 3.01
335 351 6.773638 ACCTGATGTTGAGTTGATAAAGACT 58.226 36.000 0.00 0.00 0.00 3.24
337 353 6.768483 TGACCTGATGTTGAGTTGATAAAGA 58.232 36.000 0.00 0.00 0.00 2.52
338 354 7.621428 ATGACCTGATGTTGAGTTGATAAAG 57.379 36.000 0.00 0.00 0.00 1.85
340 356 7.619965 TGTATGACCTGATGTTGAGTTGATAA 58.380 34.615 0.00 0.00 0.00 1.75
341 357 7.181569 TGTATGACCTGATGTTGAGTTGATA 57.818 36.000 0.00 0.00 0.00 2.15
344 360 5.106555 GGTTGTATGACCTGATGTTGAGTTG 60.107 44.000 0.00 0.00 36.73 3.16
345 361 5.003804 GGTTGTATGACCTGATGTTGAGTT 58.996 41.667 0.00 0.00 36.73 3.01
347 363 4.578871 TGGTTGTATGACCTGATGTTGAG 58.421 43.478 0.00 0.00 40.47 3.02
348 364 4.632327 TGGTTGTATGACCTGATGTTGA 57.368 40.909 0.00 0.00 40.47 3.18
349 365 5.188434 AGATGGTTGTATGACCTGATGTTG 58.812 41.667 0.00 0.00 40.47 3.33
351 367 4.471025 TGAGATGGTTGTATGACCTGATGT 59.529 41.667 0.00 0.00 40.47 3.06
352 368 5.027293 TGAGATGGTTGTATGACCTGATG 57.973 43.478 0.00 0.00 40.47 3.07
353 369 5.698741 TTGAGATGGTTGTATGACCTGAT 57.301 39.130 0.00 0.00 40.47 2.90
354 370 5.497464 TTTGAGATGGTTGTATGACCTGA 57.503 39.130 0.00 0.00 40.47 3.86
355 371 7.770433 TCTTATTTGAGATGGTTGTATGACCTG 59.230 37.037 0.00 0.00 40.47 4.00
357 373 8.506168 TTCTTATTTGAGATGGTTGTATGACC 57.494 34.615 0.00 0.00 40.23 4.02
358 374 8.125448 GCTTCTTATTTGAGATGGTTGTATGAC 58.875 37.037 0.00 0.00 0.00 3.06
359 375 7.283127 GGCTTCTTATTTGAGATGGTTGTATGA 59.717 37.037 0.00 0.00 0.00 2.15
360 376 7.067372 TGGCTTCTTATTTGAGATGGTTGTATG 59.933 37.037 0.00 0.00 0.00 2.39
361 377 7.067494 GTGGCTTCTTATTTGAGATGGTTGTAT 59.933 37.037 0.00 0.00 0.00 2.29
362 378 6.374333 GTGGCTTCTTATTTGAGATGGTTGTA 59.626 38.462 0.00 0.00 0.00 2.41
363 379 5.183904 GTGGCTTCTTATTTGAGATGGTTGT 59.816 40.000 0.00 0.00 0.00 3.32
365 381 4.706962 GGTGGCTTCTTATTTGAGATGGTT 59.293 41.667 0.00 0.00 0.00 3.67
366 382 4.273318 GGTGGCTTCTTATTTGAGATGGT 58.727 43.478 0.00 0.00 0.00 3.55
367 383 3.313526 CGGTGGCTTCTTATTTGAGATGG 59.686 47.826 0.00 0.00 0.00 3.51
368 384 4.191544 TCGGTGGCTTCTTATTTGAGATG 58.808 43.478 0.00 0.00 0.00 2.90
370 386 3.260884 ACTCGGTGGCTTCTTATTTGAGA 59.739 43.478 0.00 0.00 0.00 3.27
371 387 3.372206 CACTCGGTGGCTTCTTATTTGAG 59.628 47.826 0.00 0.00 0.00 3.02
372 388 3.244422 ACACTCGGTGGCTTCTTATTTGA 60.244 43.478 8.57 0.00 37.94 2.69
373 389 3.074412 ACACTCGGTGGCTTCTTATTTG 58.926 45.455 8.57 0.00 37.94 2.32
375 391 3.074412 CAACACTCGGTGGCTTCTTATT 58.926 45.455 8.57 0.00 37.94 1.40
377 393 1.414919 ACAACACTCGGTGGCTTCTTA 59.585 47.619 8.57 0.00 37.94 2.10
378 394 0.180406 ACAACACTCGGTGGCTTCTT 59.820 50.000 8.57 0.00 37.94 2.52
379 395 0.532862 CACAACACTCGGTGGCTTCT 60.533 55.000 8.57 0.00 37.94 2.85
380 396 0.814010 ACACAACACTCGGTGGCTTC 60.814 55.000 8.57 0.00 39.31 3.86
381 397 0.814010 GACACAACACTCGGTGGCTT 60.814 55.000 8.57 0.00 39.96 4.35
382 398 1.227556 GACACAACACTCGGTGGCT 60.228 57.895 8.57 0.00 39.96 4.75
383 399 1.522806 TGACACAACACTCGGTGGC 60.523 57.895 8.57 0.00 43.45 5.01
385 401 2.502213 TAGTGACACAACACTCGGTG 57.498 50.000 8.59 2.92 46.36 4.94
386 402 2.288825 CCATAGTGACACAACACTCGGT 60.289 50.000 8.59 0.00 46.36 4.69
387 403 2.337583 CCATAGTGACACAACACTCGG 58.662 52.381 8.59 4.21 46.36 4.63
388 404 2.337583 CCCATAGTGACACAACACTCG 58.662 52.381 8.59 0.00 46.36 4.18
389 405 2.076863 GCCCATAGTGACACAACACTC 58.923 52.381 8.59 0.00 46.36 3.51
392 408 1.696884 TCAGCCCATAGTGACACAACA 59.303 47.619 8.59 0.00 0.00 3.33
394 410 1.339055 GCTCAGCCCATAGTGACACAA 60.339 52.381 8.59 0.00 0.00 3.33
395 411 0.250234 GCTCAGCCCATAGTGACACA 59.750 55.000 8.59 0.00 0.00 3.72
396 412 0.539051 AGCTCAGCCCATAGTGACAC 59.461 55.000 0.00 0.00 0.00 3.67
397 413 0.826715 GAGCTCAGCCCATAGTGACA 59.173 55.000 9.40 0.00 0.00 3.58
398 414 0.249238 CGAGCTCAGCCCATAGTGAC 60.249 60.000 15.40 0.00 0.00 3.67
399 415 2.021068 GCGAGCTCAGCCCATAGTGA 62.021 60.000 15.40 0.00 0.00 3.41
400 416 1.593750 GCGAGCTCAGCCCATAGTG 60.594 63.158 15.40 0.00 0.00 2.74
401 417 1.406065 ATGCGAGCTCAGCCCATAGT 61.406 55.000 21.97 4.77 0.00 2.12
402 418 0.605083 TATGCGAGCTCAGCCCATAG 59.395 55.000 21.97 2.89 0.00 2.23
404 420 1.370437 CTATGCGAGCTCAGCCCAT 59.630 57.895 21.97 15.90 0.00 4.00
406 422 2.030262 CCTATGCGAGCTCAGCCC 59.970 66.667 21.97 6.04 0.00 5.19
407 423 0.878086 GAACCTATGCGAGCTCAGCC 60.878 60.000 21.97 8.23 0.00 4.85
408 424 0.179100 TGAACCTATGCGAGCTCAGC 60.179 55.000 15.40 17.75 0.00 4.26
409 425 1.850377 CTGAACCTATGCGAGCTCAG 58.150 55.000 15.40 7.85 31.18 3.35
411 427 0.878086 GGCTGAACCTATGCGAGCTC 60.878 60.000 2.73 2.73 34.51 4.09
412 428 1.144936 GGCTGAACCTATGCGAGCT 59.855 57.895 0.00 0.00 34.51 4.09
413 429 0.744414 TTGGCTGAACCTATGCGAGC 60.744 55.000 0.00 0.00 40.22 5.03
414 430 1.134699 TCTTGGCTGAACCTATGCGAG 60.135 52.381 0.00 0.00 40.22 5.03
415 431 0.901827 TCTTGGCTGAACCTATGCGA 59.098 50.000 0.00 0.00 40.22 5.10
416 432 1.869767 GATCTTGGCTGAACCTATGCG 59.130 52.381 0.00 0.00 40.22 4.73
417 433 2.225467 GGATCTTGGCTGAACCTATGC 58.775 52.381 0.00 0.00 40.22 3.14
418 434 2.487986 GGGGATCTTGGCTGAACCTATG 60.488 54.545 0.00 0.00 40.22 2.23
420 436 1.213296 GGGGATCTTGGCTGAACCTA 58.787 55.000 0.00 0.00 40.22 3.08
421 437 0.551131 AGGGGATCTTGGCTGAACCT 60.551 55.000 0.00 0.00 40.22 3.50
423 439 1.473434 CGTAGGGGATCTTGGCTGAAC 60.473 57.143 0.00 0.00 0.00 3.18
424 440 0.830648 CGTAGGGGATCTTGGCTGAA 59.169 55.000 0.00 0.00 0.00 3.02
425 441 0.032515 TCGTAGGGGATCTTGGCTGA 60.033 55.000 0.00 0.00 0.00 4.26
426 442 0.830648 TTCGTAGGGGATCTTGGCTG 59.169 55.000 0.00 0.00 0.00 4.85
427 443 1.417890 CATTCGTAGGGGATCTTGGCT 59.582 52.381 0.00 0.00 0.00 4.75
428 444 1.884235 CATTCGTAGGGGATCTTGGC 58.116 55.000 0.00 0.00 0.00 4.52
429 445 1.543429 GGCATTCGTAGGGGATCTTGG 60.543 57.143 0.00 0.00 0.00 3.61
430 446 1.873903 CGGCATTCGTAGGGGATCTTG 60.874 57.143 0.00 0.00 0.00 3.02
432 448 1.472662 CCGGCATTCGTAGGGGATCT 61.473 60.000 0.00 0.00 37.11 2.75
435 451 2.042741 TCCGGCATTCGTAGGGGA 60.043 61.111 0.00 0.00 37.11 4.81
436 452 2.421739 CTCCGGCATTCGTAGGGG 59.578 66.667 0.00 0.00 37.11 4.79
439 455 0.389391 ATCCACTCCGGCATTCGTAG 59.611 55.000 0.00 0.00 37.11 3.51
442 458 0.461870 TTCATCCACTCCGGCATTCG 60.462 55.000 0.00 0.00 38.88 3.34
443 459 1.303309 CTTCATCCACTCCGGCATTC 58.697 55.000 0.00 0.00 33.14 2.67
444 460 0.107017 CCTTCATCCACTCCGGCATT 60.107 55.000 0.00 0.00 33.14 3.56
445 461 0.982852 TCCTTCATCCACTCCGGCAT 60.983 55.000 0.00 0.00 33.14 4.40
446 462 0.982852 ATCCTTCATCCACTCCGGCA 60.983 55.000 0.00 0.00 33.14 5.69
447 463 0.533755 CATCCTTCATCCACTCCGGC 60.534 60.000 0.00 0.00 33.14 6.13
448 464 1.123077 TCATCCTTCATCCACTCCGG 58.877 55.000 0.00 0.00 0.00 5.14
449 465 1.536922 CGTCATCCTTCATCCACTCCG 60.537 57.143 0.00 0.00 0.00 4.63
451 467 1.576356 GCGTCATCCTTCATCCACTC 58.424 55.000 0.00 0.00 0.00 3.51
452 468 0.179000 GGCGTCATCCTTCATCCACT 59.821 55.000 0.00 0.00 0.00 4.00
457 473 1.212688 TCCATTGGCGTCATCCTTCAT 59.787 47.619 0.00 0.00 0.00 2.57
460 476 0.749454 GCTCCATTGGCGTCATCCTT 60.749 55.000 0.00 0.00 0.00 3.36
462 478 2.189499 GGCTCCATTGGCGTCATCC 61.189 63.158 0.00 0.00 0.00 3.51
463 479 0.820891 ATGGCTCCATTGGCGTCATC 60.821 55.000 6.95 0.00 31.82 2.92
464 480 1.105167 CATGGCTCCATTGGCGTCAT 61.105 55.000 6.95 6.95 33.90 3.06
465 481 1.750018 CATGGCTCCATTGGCGTCA 60.750 57.895 1.87 1.87 33.90 4.35
466 482 3.113745 CATGGCTCCATTGGCGTC 58.886 61.111 0.00 0.00 33.90 5.19
467 483 3.142838 GCATGGCTCCATTGGCGT 61.143 61.111 0.00 0.00 33.90 5.68
468 484 3.908081 GGCATGGCTCCATTGGCG 61.908 66.667 12.86 0.00 33.90 5.69
469 485 2.760799 TGGCATGGCTCCATTGGC 60.761 61.111 21.08 13.73 33.90 4.52
470 486 2.428925 GGTGGCATGGCTCCATTGG 61.429 63.158 29.48 0.00 35.81 3.16
471 487 2.428925 GGGTGGCATGGCTCCATTG 61.429 63.158 33.24 0.00 35.81 2.82
472 488 2.042639 GGGTGGCATGGCTCCATT 60.043 61.111 33.24 0.00 35.81 3.16
475 491 3.684369 AATGGGGTGGCATGGCTCC 62.684 63.158 27.35 27.35 0.00 4.70
476 492 2.042639 AATGGGGTGGCATGGCTC 60.043 61.111 21.08 16.69 0.00 4.70
477 493 2.246513 ATCAATGGGGTGGCATGGCT 62.247 55.000 21.08 0.00 0.00 4.75
478 494 1.751349 GATCAATGGGGTGGCATGGC 61.751 60.000 13.29 13.29 0.00 4.40
479 495 0.105862 AGATCAATGGGGTGGCATGG 60.106 55.000 0.00 0.00 0.00 3.66
480 496 1.325355 GAGATCAATGGGGTGGCATG 58.675 55.000 0.00 0.00 0.00 4.06
481 497 0.179009 CGAGATCAATGGGGTGGCAT 60.179 55.000 0.00 0.00 0.00 4.40
484 500 0.530650 CGTCGAGATCAATGGGGTGG 60.531 60.000 0.00 0.00 0.00 4.61
486 502 1.144057 GCGTCGAGATCAATGGGGT 59.856 57.895 0.00 0.00 0.00 4.95
487 503 0.877649 CTGCGTCGAGATCAATGGGG 60.878 60.000 0.00 0.00 0.00 4.96
489 505 0.807275 TGCTGCGTCGAGATCAATGG 60.807 55.000 0.00 0.00 0.00 3.16
490 506 1.001624 TTGCTGCGTCGAGATCAATG 58.998 50.000 0.00 0.00 0.00 2.82
492 508 1.014044 GGTTGCTGCGTCGAGATCAA 61.014 55.000 0.00 0.00 0.00 2.57
493 509 1.446099 GGTTGCTGCGTCGAGATCA 60.446 57.895 0.00 0.00 0.00 2.92
494 510 0.807667 ATGGTTGCTGCGTCGAGATC 60.808 55.000 0.00 0.00 0.00 2.75
495 511 1.086067 CATGGTTGCTGCGTCGAGAT 61.086 55.000 0.00 0.00 0.00 2.75
497 513 2.743752 CCATGGTTGCTGCGTCGAG 61.744 63.158 2.57 0.00 0.00 4.04
498 514 2.723586 TTCCATGGTTGCTGCGTCGA 62.724 55.000 12.58 0.00 0.00 4.20
499 515 1.647545 ATTCCATGGTTGCTGCGTCG 61.648 55.000 12.58 0.00 0.00 5.12
500 516 0.179156 CATTCCATGGTTGCTGCGTC 60.179 55.000 12.58 0.00 0.00 5.19
501 517 1.597797 CCATTCCATGGTTGCTGCGT 61.598 55.000 12.58 0.00 45.54 5.24
512 528 3.028850 CAGTGCCAAATCTCCATTCCAT 58.971 45.455 0.00 0.00 0.00 3.41
513 529 2.041485 TCAGTGCCAAATCTCCATTCCA 59.959 45.455 0.00 0.00 0.00 3.53
514 530 2.424956 GTCAGTGCCAAATCTCCATTCC 59.575 50.000 0.00 0.00 0.00 3.01
515 531 3.084039 TGTCAGTGCCAAATCTCCATTC 58.916 45.455 0.00 0.00 0.00 2.67
516 532 3.087031 CTGTCAGTGCCAAATCTCCATT 58.913 45.455 0.00 0.00 0.00 3.16
517 533 2.619849 CCTGTCAGTGCCAAATCTCCAT 60.620 50.000 0.00 0.00 0.00 3.41
518 534 1.271543 CCTGTCAGTGCCAAATCTCCA 60.272 52.381 0.00 0.00 0.00 3.86
519 535 1.457346 CCTGTCAGTGCCAAATCTCC 58.543 55.000 0.00 0.00 0.00 3.71
520 536 0.807496 GCCTGTCAGTGCCAAATCTC 59.193 55.000 0.00 0.00 0.00 2.75
521 537 0.957395 CGCCTGTCAGTGCCAAATCT 60.957 55.000 0.00 0.00 0.00 2.40
522 538 1.237285 ACGCCTGTCAGTGCCAAATC 61.237 55.000 0.00 0.00 0.00 2.17
523 539 1.228245 ACGCCTGTCAGTGCCAAAT 60.228 52.632 0.00 0.00 0.00 2.32
524 540 2.186160 CACGCCTGTCAGTGCCAAA 61.186 57.895 0.00 0.00 0.00 3.28
529 545 2.179547 TGTTGCACGCCTGTCAGTG 61.180 57.895 0.00 0.00 41.01 3.66
530 546 2.180204 GTGTTGCACGCCTGTCAGT 61.180 57.895 0.00 0.00 0.00 3.41
531 547 2.633657 GTGTTGCACGCCTGTCAG 59.366 61.111 0.00 0.00 0.00 3.51
532 548 2.899838 GGTGTTGCACGCCTGTCA 60.900 61.111 10.48 0.00 45.06 3.58
533 549 4.012895 CGGTGTTGCACGCCTGTC 62.013 66.667 14.27 0.00 46.27 3.51
535 551 2.982038 GAAACGGTGTTGCACGCCTG 62.982 60.000 14.27 10.95 46.27 4.85
536 552 2.826738 AAACGGTGTTGCACGCCT 60.827 55.556 14.27 2.72 46.27 5.52
538 554 2.353030 GGAAACGGTGTTGCACGC 60.353 61.111 0.00 0.00 34.83 5.34
540 556 1.652563 GGAGGAAACGGTGTTGCAC 59.347 57.895 0.00 0.00 0.00 4.57
541 557 1.527380 GGGAGGAAACGGTGTTGCA 60.527 57.895 0.00 0.00 0.00 4.08
542 558 0.822121 AAGGGAGGAAACGGTGTTGC 60.822 55.000 0.00 0.00 0.00 4.17
543 559 2.554370 TAAGGGAGGAAACGGTGTTG 57.446 50.000 0.00 0.00 0.00 3.33
544 560 2.640826 TCATAAGGGAGGAAACGGTGTT 59.359 45.455 0.00 0.00 0.00 3.32
548 564 2.906354 CAGTCATAAGGGAGGAAACGG 58.094 52.381 0.00 0.00 0.00 4.44
549 565 2.280628 GCAGTCATAAGGGAGGAAACG 58.719 52.381 0.00 0.00 0.00 3.60
551 567 2.562296 AGGCAGTCATAAGGGAGGAAA 58.438 47.619 0.00 0.00 0.00 3.13
553 569 3.052109 TCTTAGGCAGTCATAAGGGAGGA 60.052 47.826 0.00 0.00 31.28 3.71
554 570 3.309296 TCTTAGGCAGTCATAAGGGAGG 58.691 50.000 0.00 0.00 31.28 4.30
555 571 6.295575 CCTTATCTTAGGCAGTCATAAGGGAG 60.296 46.154 13.53 2.07 41.01 4.30
556 572 5.544176 CCTTATCTTAGGCAGTCATAAGGGA 59.456 44.000 13.53 0.00 41.01 4.20
557 573 5.799213 CCTTATCTTAGGCAGTCATAAGGG 58.201 45.833 13.53 0.00 41.01 3.95
571 587 4.277476 CATGGTTGTTGGGCCTTATCTTA 58.723 43.478 4.53 0.00 0.00 2.10
572 588 2.990740 TGGTTGTTGGGCCTTATCTT 57.009 45.000 4.53 0.00 0.00 2.40
573 589 2.624029 CCATGGTTGTTGGGCCTTATCT 60.624 50.000 4.53 0.00 0.00 1.98
574 590 1.756538 CCATGGTTGTTGGGCCTTATC 59.243 52.381 4.53 0.00 0.00 1.75
575 591 1.360852 TCCATGGTTGTTGGGCCTTAT 59.639 47.619 12.58 0.00 34.85 1.73
577 593 0.105246 TTCCATGGTTGTTGGGCCTT 60.105 50.000 12.58 0.00 34.85 4.35
578 594 0.116940 ATTCCATGGTTGTTGGGCCT 59.883 50.000 12.58 0.00 34.85 5.19
579 595 0.249955 CATTCCATGGTTGTTGGGCC 59.750 55.000 12.58 0.00 34.85 5.80
580 596 0.249955 CCATTCCATGGTTGTTGGGC 59.750 55.000 12.58 0.00 45.54 5.36
590 606 0.959867 TGCCACGTCACCATTCCATG 60.960 55.000 0.00 0.00 0.00 3.66
592 608 1.149401 TTGCCACGTCACCATTCCA 59.851 52.632 0.00 0.00 0.00 3.53
593 609 1.579429 GTTGCCACGTCACCATTCC 59.421 57.895 0.00 0.00 0.00 3.01
594 610 1.206578 CGTTGCCACGTCACCATTC 59.793 57.895 1.47 0.00 41.84 2.67
595 611 2.258013 CCGTTGCCACGTCACCATT 61.258 57.895 9.67 0.00 45.62 3.16
607 623 0.379669 CAGGATGCAGATTCCGTTGC 59.620 55.000 0.00 0.00 38.36 4.17
686 702 4.273005 ACGAAAATGTTATGCATCCGAC 57.727 40.909 0.19 1.32 36.67 4.79
770 786 5.403246 CAGTAGCAACTTCGTAGATTCAGT 58.597 41.667 0.00 0.00 35.04 3.41
772 788 4.174009 GCAGTAGCAACTTCGTAGATTCA 58.826 43.478 0.00 0.00 41.58 2.57
773 789 4.763594 GCAGTAGCAACTTCGTAGATTC 57.236 45.455 0.00 0.00 41.58 2.52
794 810 7.440523 ACAGACTTTAGGCAAAACTTATCTG 57.559 36.000 0.00 0.00 36.70 2.90
883 899 0.037697 CCTGATCGGACACACGGAAA 60.038 55.000 2.08 0.00 33.16 3.13
884 900 0.896479 TCCTGATCGGACACACGGAA 60.896 55.000 2.08 0.00 36.69 4.30
885 901 1.303806 TCCTGATCGGACACACGGA 60.304 57.895 2.08 0.00 36.69 4.69
886 902 3.284336 TCCTGATCGGACACACGG 58.716 61.111 2.08 0.00 36.69 4.94
893 909 3.637229 GAGGATACAAAGTCCTGATCGGA 59.363 47.826 2.08 2.42 45.93 4.55
894 910 3.551046 CGAGGATACAAAGTCCTGATCGG 60.551 52.174 0.00 0.00 45.93 4.18
896 912 4.500035 GGACGAGGATACAAAGTCCTGATC 60.500 50.000 8.67 0.00 45.93 2.92
898 914 2.758979 GGACGAGGATACAAAGTCCTGA 59.241 50.000 8.67 0.00 45.93 3.86
901 917 1.475682 ACGGACGAGGATACAAAGTCC 59.524 52.381 0.00 6.46 46.40 3.85
902 918 2.935481 ACGGACGAGGATACAAAGTC 57.065 50.000 0.00 0.00 41.41 3.01
904 920 3.226346 TGAACGGACGAGGATACAAAG 57.774 47.619 0.00 0.00 41.41 2.77
905 921 3.006110 ACTTGAACGGACGAGGATACAAA 59.994 43.478 0.00 0.00 41.41 2.83
906 922 2.559668 ACTTGAACGGACGAGGATACAA 59.440 45.455 0.00 0.00 41.41 2.41
909 925 4.012374 ACTAACTTGAACGGACGAGGATA 58.988 43.478 0.00 0.00 0.00 2.59
910 926 2.824341 ACTAACTTGAACGGACGAGGAT 59.176 45.455 0.00 0.00 0.00 3.24
911 927 2.233271 ACTAACTTGAACGGACGAGGA 58.767 47.619 0.00 0.00 0.00 3.71
912 928 2.719426 ACTAACTTGAACGGACGAGG 57.281 50.000 0.00 0.00 0.00 4.63
913 929 2.729882 CCAACTAACTTGAACGGACGAG 59.270 50.000 0.00 0.00 30.42 4.18
914 930 2.101249 ACCAACTAACTTGAACGGACGA 59.899 45.455 0.00 0.00 30.42 4.20
915 931 2.220133 CACCAACTAACTTGAACGGACG 59.780 50.000 0.00 0.00 30.42 4.79
916 932 3.200483 ACACCAACTAACTTGAACGGAC 58.800 45.455 0.00 0.00 30.42 4.79
918 934 2.546789 GGACACCAACTAACTTGAACGG 59.453 50.000 0.00 0.00 30.42 4.44
951 967 6.294361 TGTGTATATATACATGGCTGGGTC 57.706 41.667 24.67 11.58 44.25 4.46
976 992 5.609284 TGGGTGTTACAGGCCTATGTATTAT 59.391 40.000 3.98 0.00 35.65 1.28
987 1003 1.964373 CACGGTGGGTGTTACAGGC 60.964 63.158 0.00 0.00 41.89 4.85
988 1004 4.371975 CACGGTGGGTGTTACAGG 57.628 61.111 0.00 0.00 41.89 4.00
996 1012 0.812549 GTTTGTTTGTCACGGTGGGT 59.187 50.000 8.50 0.00 0.00 4.51
997 1013 0.248296 CGTTTGTTTGTCACGGTGGG 60.248 55.000 8.50 0.00 0.00 4.61
998 1014 0.727970 TCGTTTGTTTGTCACGGTGG 59.272 50.000 8.50 0.00 0.00 4.61
999 1015 1.661617 TCTCGTTTGTTTGTCACGGTG 59.338 47.619 0.56 0.56 0.00 4.94
1028 1044 3.446161 TCCCGTCGTTGTTGATCTAATCT 59.554 43.478 0.00 0.00 0.00 2.40
1032 1048 1.135199 GCTCCCGTCGTTGTTGATCTA 60.135 52.381 0.00 0.00 0.00 1.98
1034 1050 1.683790 CGCTCCCGTCGTTGTTGATC 61.684 60.000 0.00 0.00 0.00 2.92
1036 1052 2.355363 CGCTCCCGTCGTTGTTGA 60.355 61.111 0.00 0.00 0.00 3.18
1037 1053 2.355363 TCGCTCCCGTCGTTGTTG 60.355 61.111 0.00 0.00 35.54 3.33
1038 1054 2.355481 GTCGCTCCCGTCGTTGTT 60.355 61.111 0.00 0.00 35.54 2.83
1052 1068 4.657824 AACCTGCCACGTCCGTCG 62.658 66.667 0.00 0.00 46.00 5.12
1053 1069 2.280592 AAACCTGCCACGTCCGTC 60.281 61.111 0.00 0.00 0.00 4.79
1055 1071 4.025401 GCAAACCTGCCACGTCCG 62.025 66.667 0.00 0.00 43.26 4.79
1064 1080 0.734889 GGGATCGATGTGCAAACCTG 59.265 55.000 0.54 0.00 0.00 4.00
1065 1081 0.327924 TGGGATCGATGTGCAAACCT 59.672 50.000 0.54 0.00 0.00 3.50
1066 1082 1.135402 GTTGGGATCGATGTGCAAACC 60.135 52.381 0.54 0.00 0.00 3.27
1067 1083 1.812571 AGTTGGGATCGATGTGCAAAC 59.187 47.619 0.54 0.00 0.00 2.93
1068 1084 2.198827 AGTTGGGATCGATGTGCAAA 57.801 45.000 0.54 0.00 0.00 3.68
1069 1085 3.118445 TGATAGTTGGGATCGATGTGCAA 60.118 43.478 0.54 0.00 0.00 4.08
1070 1086 2.433970 TGATAGTTGGGATCGATGTGCA 59.566 45.455 0.54 0.00 0.00 4.57
1071 1087 3.111853 TGATAGTTGGGATCGATGTGC 57.888 47.619 0.54 0.00 0.00 4.57
1072 1088 5.118990 AGTTTGATAGTTGGGATCGATGTG 58.881 41.667 0.54 0.00 0.00 3.21
1073 1089 5.359194 AGTTTGATAGTTGGGATCGATGT 57.641 39.130 0.54 0.00 0.00 3.06
1088 1104 6.758886 GTCACGAGATGGATAGAAAGTTTGAT 59.241 38.462 0.00 0.00 0.00 2.57
1091 1107 6.071334 TCAGTCACGAGATGGATAGAAAGTTT 60.071 38.462 0.00 0.00 0.00 2.66
1097 1113 4.157849 ACTCAGTCACGAGATGGATAGA 57.842 45.455 4.01 0.00 36.47 1.98
1103 1119 3.935828 TCTGTCTACTCAGTCACGAGATG 59.064 47.826 4.01 0.00 36.47 2.90
1141 1157 3.243401 CGAACGATGACATGATGGACCTA 60.243 47.826 0.00 0.00 0.00 3.08
1144 1160 1.258982 GCGAACGATGACATGATGGAC 59.741 52.381 0.00 0.00 0.00 4.02
1297 2807 0.865218 CACGAGACTCGATGCTCTGC 60.865 60.000 30.56 0.00 43.74 4.26
1420 2945 0.250858 CCACATGCTTCCTGTCACCA 60.251 55.000 0.00 0.00 0.00 4.17
1452 2986 5.415077 TCAACCTGGTCGACAAAACTAAAAA 59.585 36.000 18.91 0.00 0.00 1.94
1462 2996 0.033504 GCTTCTCAACCTGGTCGACA 59.966 55.000 18.91 2.63 0.00 4.35
1721 3283 0.465460 TCAGTGCCCACCTTGTTGTC 60.465 55.000 0.00 0.00 0.00 3.18
2024 3607 2.437180 TCGGAGCCATTGCAGCAG 60.437 61.111 0.00 0.00 41.13 4.24
2164 3747 1.704628 TCCTTCAATTCCTGGCAGTGA 59.295 47.619 14.43 7.61 0.00 3.41
2280 3897 2.751259 GCAATGAGCTCCTTCACAATGA 59.249 45.455 12.15 0.00 41.15 2.57
2326 3946 4.907875 ACATGGGTAGCATAGGAGTGTTAT 59.092 41.667 0.00 0.00 0.00 1.89
2385 4009 1.094785 GGGGTCACATACATGCACAC 58.905 55.000 0.00 0.00 0.00 3.82
2387 4011 0.255890 AGGGGGTCACATACATGCAC 59.744 55.000 0.00 0.00 0.00 4.57
2391 4015 2.574369 TCGAAAAGGGGGTCACATACAT 59.426 45.455 0.00 0.00 0.00 2.29
2392 4016 1.979308 TCGAAAAGGGGGTCACATACA 59.021 47.619 0.00 0.00 0.00 2.29
2393 4017 2.773993 TCGAAAAGGGGGTCACATAC 57.226 50.000 0.00 0.00 0.00 2.39
2394 4018 3.791953 TTTCGAAAAGGGGGTCACATA 57.208 42.857 8.44 0.00 0.00 2.29
2395 4019 2.668144 TTTCGAAAAGGGGGTCACAT 57.332 45.000 8.44 0.00 0.00 3.21
2396 4020 2.438800 TTTTCGAAAAGGGGGTCACA 57.561 45.000 19.08 0.00 0.00 3.58
2413 4037 7.496346 TCTCTAGAGGGTCACATACATTTTT 57.504 36.000 19.67 0.00 0.00 1.94
2414 4038 7.118496 CTCTCTAGAGGGTCACATACATTTT 57.882 40.000 19.67 0.00 38.48 1.82
2415 4039 6.723298 CTCTCTAGAGGGTCACATACATTT 57.277 41.667 19.67 0.00 38.48 2.32
2481 4106 5.495640 TCTGGTTTGGCAAACAAGAAAAAT 58.504 33.333 36.29 0.00 45.91 1.82
2510 4135 4.891756 AGAGACAATTTGCCCATCTATTGG 59.108 41.667 0.00 0.00 46.00 3.16
2561 4186 4.079253 GGACAAACTGATTAGCTTGGGAA 58.921 43.478 5.71 0.00 34.95 3.97
2576 4201 3.034924 TGGCCACATGAGGACAAAC 57.965 52.632 16.22 0.00 45.86 2.93
2588 4213 1.641577 GTCGAGATTGTAGTGGCCAC 58.358 55.000 29.22 29.22 0.00 5.01
2609 4234 1.628846 AGAACCCCACATGACTACACC 59.371 52.381 0.00 0.00 0.00 4.16
2610 4235 2.038557 ACAGAACCCCACATGACTACAC 59.961 50.000 0.00 0.00 0.00 2.90
2637 4262 5.262455 AGAAAATCTAAGTGGGGAAAGCT 57.738 39.130 0.00 0.00 0.00 3.74
2780 4406 5.427036 TGTTTCCAAAAACGTATGGACTC 57.573 39.130 15.03 11.85 46.39 3.36
2817 4443 2.076100 CGGCAAGTTGATGCTACTCAA 58.924 47.619 7.16 0.00 45.68 3.02
2818 4444 1.001974 ACGGCAAGTTGATGCTACTCA 59.998 47.619 7.16 0.00 45.68 3.41
2819 4445 1.661112 GACGGCAAGTTGATGCTACTC 59.339 52.381 7.16 0.00 45.68 2.59
2820 4446 1.676014 GGACGGCAAGTTGATGCTACT 60.676 52.381 7.16 0.00 45.68 2.57
2821 4447 0.727398 GGACGGCAAGTTGATGCTAC 59.273 55.000 7.16 0.00 45.68 3.58
2822 4448 0.323302 TGGACGGCAAGTTGATGCTA 59.677 50.000 7.16 0.00 45.68 3.49
2823 4449 0.322816 ATGGACGGCAAGTTGATGCT 60.323 50.000 7.16 0.00 45.68 3.79
2824 4450 0.179156 CATGGACGGCAAGTTGATGC 60.179 55.000 7.16 0.00 45.67 3.91
2825 4451 1.167851 ACATGGACGGCAAGTTGATG 58.832 50.000 7.16 2.78 0.00 3.07
2826 4452 1.909700 AACATGGACGGCAAGTTGAT 58.090 45.000 7.16 0.00 0.00 2.57
2827 4453 1.686355 AAACATGGACGGCAAGTTGA 58.314 45.000 7.16 0.00 0.00 3.18
2828 4454 2.507339 AAAACATGGACGGCAAGTTG 57.493 45.000 0.00 0.00 0.00 3.16
2829 4455 2.482839 CCAAAAACATGGACGGCAAGTT 60.483 45.455 0.00 0.00 43.54 2.66
2830 4456 1.068434 CCAAAAACATGGACGGCAAGT 59.932 47.619 0.00 0.00 43.54 3.16
2831 4457 1.339610 TCCAAAAACATGGACGGCAAG 59.660 47.619 0.00 0.00 44.52 4.01
2832 4458 1.403814 TCCAAAAACATGGACGGCAA 58.596 45.000 0.00 0.00 44.52 4.52
2833 4459 3.117657 TCCAAAAACATGGACGGCA 57.882 47.368 0.00 0.00 44.52 5.69
2839 4465 2.768698 TGCATGCTTCCAAAAACATGG 58.231 42.857 20.33 0.00 38.72 3.66
2840 4466 3.126171 CCATGCATGCTTCCAAAAACATG 59.874 43.478 21.69 9.58 40.42 3.21
2841 4467 3.008157 TCCATGCATGCTTCCAAAAACAT 59.992 39.130 21.69 0.00 0.00 2.71
2842 4468 2.367894 TCCATGCATGCTTCCAAAAACA 59.632 40.909 21.69 0.00 0.00 2.83
2843 4469 3.042871 TCCATGCATGCTTCCAAAAAC 57.957 42.857 21.69 0.00 0.00 2.43
2844 4470 3.666274 CTTCCATGCATGCTTCCAAAAA 58.334 40.909 21.69 0.00 0.00 1.94
2845 4471 2.613474 GCTTCCATGCATGCTTCCAAAA 60.613 45.455 21.69 5.09 0.00 2.44
2846 4472 1.066716 GCTTCCATGCATGCTTCCAAA 60.067 47.619 21.69 6.13 0.00 3.28
2847 4473 0.533491 GCTTCCATGCATGCTTCCAA 59.467 50.000 21.69 6.42 0.00 3.53
2848 4474 0.323999 AGCTTCCATGCATGCTTCCA 60.324 50.000 21.69 0.00 34.99 3.53
2849 4475 0.102481 CAGCTTCCATGCATGCTTCC 59.898 55.000 21.69 9.07 33.03 3.46
2850 4476 1.065701 CTCAGCTTCCATGCATGCTTC 59.934 52.381 21.69 9.41 33.03 3.86
2851 4477 1.103803 CTCAGCTTCCATGCATGCTT 58.896 50.000 21.69 10.16 33.03 3.91
2852 4478 0.255033 TCTCAGCTTCCATGCATGCT 59.745 50.000 21.69 12.31 36.04 3.79
2853 4479 0.663688 CTCTCAGCTTCCATGCATGC 59.336 55.000 21.69 11.82 34.99 4.06
2854 4480 1.941294 GACTCTCAGCTTCCATGCATG 59.059 52.381 20.19 20.19 34.99 4.06
2855 4481 1.134159 GGACTCTCAGCTTCCATGCAT 60.134 52.381 0.00 0.00 34.99 3.96
2856 4482 0.251354 GGACTCTCAGCTTCCATGCA 59.749 55.000 0.00 0.00 34.99 3.96
2857 4483 0.463474 GGGACTCTCAGCTTCCATGC 60.463 60.000 3.85 0.00 0.00 4.06
2858 4484 0.179089 CGGGACTCTCAGCTTCCATG 60.179 60.000 3.85 0.00 0.00 3.66
2859 4485 0.616111 ACGGGACTCTCAGCTTCCAT 60.616 55.000 3.85 0.00 0.00 3.41
2860 4486 0.832135 AACGGGACTCTCAGCTTCCA 60.832 55.000 3.85 0.00 0.00 3.53
2861 4487 0.108567 GAACGGGACTCTCAGCTTCC 60.109 60.000 0.00 0.00 0.00 3.46
2862 4488 0.892063 AGAACGGGACTCTCAGCTTC 59.108 55.000 0.00 0.00 0.00 3.86
2863 4489 1.343069 AAGAACGGGACTCTCAGCTT 58.657 50.000 0.00 0.00 0.00 3.74
2864 4490 2.096248 CTAAGAACGGGACTCTCAGCT 58.904 52.381 0.00 0.00 0.00 4.24
2865 4491 1.819903 ACTAAGAACGGGACTCTCAGC 59.180 52.381 0.00 0.00 0.00 4.26
2866 4492 3.839293 CAACTAAGAACGGGACTCTCAG 58.161 50.000 0.00 0.00 0.00 3.35
2867 4493 2.029290 GCAACTAAGAACGGGACTCTCA 60.029 50.000 0.00 0.00 0.00 3.27
2913 4539 0.687757 TCCCAGATCCGAAGACCAGG 60.688 60.000 0.00 0.00 0.00 4.45
2923 4549 1.453669 GCCATGGTCTCCCAGATCC 59.546 63.158 14.67 0.00 46.15 3.36
2962 4588 3.763360 AGCATGCAGTAATTAGCCAACAA 59.237 39.130 21.98 0.00 0.00 2.83
2971 4597 3.659183 AGGGAAGAGCATGCAGTAATT 57.341 42.857 21.98 6.52 0.00 1.40
2976 4602 2.996631 ACTTAAGGGAAGAGCATGCAG 58.003 47.619 21.98 6.63 38.65 4.41
2987 4613 7.060421 AGTTGACATCTCAAAAACTTAAGGGA 58.940 34.615 7.53 0.00 38.17 4.20
2993 4619 7.823745 ACCATAGTTGACATCTCAAAAACTT 57.176 32.000 0.00 0.00 38.17 2.66
3047 4677 4.875561 ATATGTGCATGCATAAATGGCA 57.124 36.364 25.64 15.41 46.66 4.92
3073 4703 8.903570 ATGATACACTCGATCGATCTAAAATC 57.096 34.615 19.78 15.88 0.00 2.17
3086 4716 4.142556 TGCACGTTCTTATGATACACTCGA 60.143 41.667 0.00 0.00 0.00 4.04
3087 4717 4.102649 TGCACGTTCTTATGATACACTCG 58.897 43.478 0.00 0.00 0.00 4.18
3088 4718 6.560433 CGAATGCACGTTCTTATGATACACTC 60.560 42.308 0.00 0.00 0.00 3.51
3089 4719 5.232202 CGAATGCACGTTCTTATGATACACT 59.768 40.000 0.00 0.00 0.00 3.55
3180 4810 1.943340 GAGCCCGTTTGAAGATGATCC 59.057 52.381 0.00 0.00 0.00 3.36
3187 4817 3.011760 GACGCGAGCCCGTTTGAAG 62.012 63.158 15.93 0.00 42.24 3.02
3236 4866 2.678336 GTGAAATCGGGAAACTAGGCTG 59.322 50.000 0.00 0.00 0.00 4.85
3260 4890 3.444916 GCAACAATCTGCAATGATGGAG 58.555 45.455 0.00 0.00 45.62 3.86
3339 4969 1.969923 TGGTCCATGGCCTTGAAAAAG 59.030 47.619 19.85 3.03 0.00 2.27
3360 4990 0.175760 TTCGGGTGTATCAGAGCAGC 59.824 55.000 0.00 0.00 0.00 5.25
3397 5027 2.230994 GACACCGAGCTCAGCATGGA 62.231 60.000 15.40 0.00 36.16 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.